Statistical Models for Monitoring and Predicting Evects of Climate Change and Invasion on the Free-Living Insects and a Spider from Sub-Antarctic Heard Island
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Toward a Resolution of Campanulid Phylogeny, with Special Reference to the Placement of Dipsacales
TAXON 57 (1) • February 2008: 53–65 Winkworth & al. • Campanulid phylogeny MOLECULAR PHYLOGENETICS Toward a resolution of Campanulid phylogeny, with special reference to the placement of Dipsacales Richard C. Winkworth1,2, Johannes Lundberg3 & Michael J. Donoghue4 1 Departamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Caixa Postal 11461–CEP 05422-970, São Paulo, SP, Brazil. [email protected] (author for correspondence) 2 Current address: School of Biology, Chemistry, and Environmental Sciences, University of the South Pacific, Private Bag, Laucala Campus, Suva, Fiji 3 Department of Phanerogamic Botany, The Swedish Museum of Natural History, Box 50007, 104 05 Stockholm, Sweden 4 Department of Ecology & Evolutionary Biology and Peabody Museum of Natural History, Yale University, P.O. Box 208106, New Haven, Connecticut 06520-8106, U.S.A. Broad-scale phylogenetic analyses of the angiosperms and of the Asteridae have failed to confidently resolve relationships among the major lineages of the campanulid Asteridae (i.e., the euasterid II of APG II, 2003). To address this problem we assembled presently available sequences for a core set of 50 taxa, representing the diver- sity of the four largest lineages (Apiales, Aquifoliales, Asterales, Dipsacales) as well as the smaller “unplaced” groups (e.g., Bruniaceae, Paracryphiaceae, Columelliaceae). We constructed four data matrices for phylogenetic analysis: a chloroplast coding matrix (atpB, matK, ndhF, rbcL), a chloroplast non-coding matrix (rps16 intron, trnT-F region, trnV-atpE IGS), a combined chloroplast dataset (all seven chloroplast regions), and a combined genome matrix (seven chloroplast regions plus 18S and 26S rDNA). Bayesian analyses of these datasets using mixed substitution models produced often well-resolved and supported trees. -
TERRESTRIAL VEGETATION and ENVIRONMENTS on HEARD ISLAND by D.M
Papers and Proceedings of the Royal Society of Tasmania, Volume 133(2), 2000 33 TERRESTRIAL VEGETATION AND ENVIRONMENTS ON HEARD ISLAND by D.M. Bergstrom and P.M. Selkirk (with three tables, one text-figure, one plate and an appendix) BERGSTROM, D.M. & SELKIRK, P.M., 2000 (30:vi): Terrestrial vegetation and environments on Heard Island. In Banks, M.R. & Brown, M.J. (Eds): HEARD ISLAND PAPERS. Pap. Proc. R. Soc. Tasm. 133(2): 33-46. https://doi.org/10.26749/rstpp.133.2.33 ISSN 0080-4703. Department ofBotany, The University of Queensland, Brisbane, Queensland, Australia 4072 (DMB); and Department of Biological Sciences, Macquarie University, Sydney, New South Wales, Australia 2019 (PMS). Significantly ice-covered and with a very small flora (11 vascular species and about 60 bryophyte taxa), Heard Island is still emerging from the effects of the last glacial maximum. This study presents the results of a general vegetation survey. A baseline framework of environmental conditions that affect vegetation on the island is described and a classification (TWINS PAN) analysis based on presence/ absence data of both vascular plant species and bryophyte taxa is provided. Distinct suites of taxa were identified on the island, some containing bryophytes only. Fifreen ecological groups were delineated. A discussion of ecological amplitude ofimportant bryophyte and vascular plant taxa on Heard Island is included. Key Words: Subantarctic, tundra, vegetation, bryophytes, cushion plants, Heard Island. INTRODUCTION during the Tertiary and included a variety of ferns and a podocarp (Quilty et al. 1983). Subantarctic Heard Island (53°06'S, 73°32'E) is approxi There have been few studies of terrestrial plant ecology mately 4850 km southeast of southern Africa, 4350 km on Heard Island. -
Soil Calcium Availability Influences Shell Ecophenotype Formation in the Sub-Antarctic Land Snail, Notodiscus Hookeri
Soil Calcium Availability Influences Shell Ecophenotype Formation in the Sub-Antarctic Land Snail, Notodiscus hookeri Maryvonne Charrier1*, Arul Marie2, Damien Guillaume3, Laurent Bédouet4, Joseph Le Lannic5, Claire Roiland6, Sophie Berland4, Jean-Sébastien Pierre1, Marie Le Floch6, Yves Frenot7, Marc Lebouvier8 1 Université de Rennes 1, Université Européenne de Bretagne, UMR CNRS 6553, Campus de Beaulieu, Rennes, France, 2 Muséum National d’Histoire Naturelle, Plateforme de Spectrométrie de Masse et de Protéomique, UMR CNRS 7245, Département Régulation Développement et Diversité Moléculaire, Paris, France, 3 Université de Toulouse, Observatoire Midi-Pyrénées, Géosciences Environnement Toulouse, UMR 5563 (CNRS/UPS/IRD/CNES), Toulouse, France., 4 Muséum National d’Histoire Naturelle, Biologie des Organismes et Ecosystèmes Aquatiques, UMR CNRS 7208 / IRD 207, Paris, France, 5 Université de Rennes 1, Université Européenne de Bretagne, Service Commun de Microscopie Electronique à Balayage et micro-Analyse, Rennes, France, 6 Université de Rennes 1, Université Européenne de Bretagne, Sciences Chimiques de Rennes, UMR CNRS 6226, Campus de Beaulieu, Rennes, France, 7 Institut Polaire Français Paul Émile Victor, Technopôle Brest-Iroise, Plouzané, France, 8 Université de Rennes 1, Université Européenne de Bretagne, UMR CNRS 6553, Station Biologique, Paimpont, France Abstract Ecophenotypes reflect local matches between organisms and their environment, and show plasticity across generations in response to current living conditions. Plastic responses in shell morphology and shell growth have been widely studied in gastropods and are often related to environmental calcium availability, which influences shell biomineralisation. To date, all of these studies have overlooked micro-scale structure of the shell, in addition to how it is related to species responses in the context of environmental pressure. -
Part 4 Appendices
Part 4 Appendices HEARD ISLAND AND MCDONALD ISLANDS MARINE RESERVE 139 Appendix 1. Proclamation of Heard Island and McDonald Islands Marine Reserve 140 MANAGEMENT PLAN HEARD ISLAND AND MCDONALD ISLANDS MARINE RESERVE 141 142 MANAGEMENT PLAN Appendix 2. Native Fauna of the HIMI Marine Reserve Listed Under the EPBC Act Scientific Name Common Name Birds recorded as breeding Aptenodytes patagonicus king penguin S Catharacta lonnbergi subantarctic skua S Daption capense cape petrel S Diomeda exulans wandering albatross V S M B J A Diomeda melanophrys black–browed albatross S M B A Eudyptes chrysocome southern rockhopper penguin S Eudyptes chrysolophus macaroni penguin S Larus dominicanus kelp gull S Macronectes giganteus southern giant petrel E S M B A Oceanites oceanicus Wilson’s storm petrel S M J Pachyptila crassirostris fulmar prion S Pachyptila desolata Antarctic prion S Pelecanoides georgicus South Georgian diving petrel S Pelecanoides urinatrix common diving petrel S Phalacrocorax atriceps (e) Heard Island cormorant V S Phoebetria palpebrata light mantled sooty albatross S M B A Pygoscelis papua gentoo penguin S Sterna vittata Antarctic tern V S Non–breeding birds Catharacta maccormicki south polar skua S M J Diomedea epomophora southern royal albatross V S M B A Fregetta grallaria white–bellied storm petrel S Fregetta tropica black–bellied storm petrel S Fulmarus glacialoides southern fulmar S Garrodia nereis grey–backed storm petrel S Halobaena caerulea blue petrel V S Macronectes halli northern giant petrel V S M B A Pachyptila belcheri -
Size Class Structure, Growth Rates, and Orientation of the Central Andean Cushion Azorella Compacta
Size class structure, growth rates, and orientation of the central Andean cushion Azorella compacta Catherine Kleier1, Tim Trenary2, Eric A. Graham3, William Stenzel4 and Philip W. Rundel5 1 Department of Biology, Regis University, Denver, CO, USA 2 Department of Mathematics, Regis University, Denver, CO, USA 3 Nexleaf Analytics, Los Angeles, CA, USA 4 Department of Computer Information Systems, Metropolitan State University, Denver, CO, USA 5 Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, USA ABSTRACT Azorella compacta (llareta; Apiaceae) forms dense, woody, cushions and characterizes the high elevation rocky slopes of the central Andean Altiplano. Field studies of an elevational gradient of A. compacta within Lauca National Park in northern Chile found a reverse J-shape distribution of size classes of individuals with abundant small plants at all elevations. A new elevational limit for A. compacta was established at 5,250 m. A series of cushions marked 14 years earlier showed either slight shrinkage or small degrees of growth up to 2.2 cm yr−1. Despite their irregularity in growth, cushions of A. compacta show a strong orientation, centered on a north-facing aspect and angle of about 20◦ from horizontal. This exposure to maximize solar irradiance closely matches previous observations of a population favoring north-facing slopes at a similar angle. Populations of A. compacta appear to be stable, or even expanding, with young plants abundant. Subjects Ecology Keywords Andes, Parque Nacional Lauca, Growth rate, Cushion plant, Puna Submitted 19 November 2014 Accepted 27 February 2015 Published 17 March 2015 INTRODUCTION Azorella compacta (Apiaceae), a large woody cushion plant, forms an iconic species of the Corresponding author Catherine Kleier, [email protected] Altiplano Plateau of northern Chile, Bolivia, Argentina, and Peru (Kleier& Rundel, 2004 ). -
Taxonomy and Population Genetics of the Flightless Moth Genus, Pringleophaga in the Sub-Antarctic
Taxonomy and Population Genetics of the Flightless Moth Genus, Pringleophaga in the Sub-Antarctic by Catharina Wilhelmina Groenewald Thesis presented in partial fulfilment of the requirements for the degree "Master of Science in Zoology" at Stellenbosch University Supervisor: Prof. Bettine Jansen van Vuuren Co-supervisor: Prof. Steven L. Chown Faculty of Science March 2013 Stellenbosch University http://scholar.sun.ac.za II DECLARATION By submitting this thesis/dissertation electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. March 2013 ………………………………………. Catharina Wilhelmina Groenewald Copyright © 2013 Stellenbosch University All rights reserved Stellenbosch University http://scholar.sun.ac.za III ABSTRACT Sub-Antarctic Islands are of considerable conservation importance due to their high endemicity and unique ecosystems. Furthermore, the rich geological and glaciological histories of these islands provide a unique platform to study the biodiversity and biogeography of its biota. Sub-Antarctic islands are divided into three biogeographic regions; the South Indian Ocean Province includes the Prince Edward Islands, Îles Kerguelen, Îles Crozet, Heard Island and McDonald Island. One of the taxa that have long fascinated biogeographers and taxonomists alike is the flightless moth, genus Pringleophaga, which is endemic to the Kerguelen, Crozet and Prince Edward Islands. This study addressed three questions relating to the genus Pringleophaga at various spatial and evolutionary scales. -
Phylogeny and Phylogenetic Nomenclature of the Campanulidae Based on an Expanded Sample of Genes and Taxa
Systematic Botany (2010), 35(2): pp. 425–441 © Copyright 2010 by the American Society of Plant Taxonomists Phylogeny and Phylogenetic Nomenclature of the Campanulidae based on an Expanded Sample of Genes and Taxa David C. Tank 1,2,3 and Michael J. Donoghue 1 1 Peabody Museum of Natural History & Department of Ecology & Evolutionary Biology, Yale University, P. O. Box 208106, New Haven, Connecticut 06520 U. S. A. 2 Department of Forest Resources & Stillinger Herbarium, College of Natural Resources, University of Idaho, P. O. Box 441133, Moscow, Idaho 83844-1133 U. S. A. 3 Author for correspondence ( [email protected] ) Communicating Editor: Javier Francisco-Ortega Abstract— Previous attempts to resolve relationships among the primary lineages of Campanulidae (e.g. Apiales, Asterales, Dipsacales) have mostly been unconvincing, and the placement of a number of smaller groups (e.g. Bruniaceae, Columelliaceae, Escalloniaceae) remains uncertain. Here we build on a recent analysis of an incomplete data set that was assembled from the literature for a set of 50 campanulid taxa. To this data set we first added newly generated DNA sequence data for the same set of genes and taxa. Second, we sequenced three additional cpDNA coding regions (ca. 8,000 bp) for the same set of 50 campanulid taxa. Finally, we assembled the most comprehensive sample of cam- panulid diversity to date, including ca. 17,000 bp of cpDNA for 122 campanulid taxa and five outgroups. Simply filling in missing data in the 50-taxon data set (rendering it 94% complete) resulted in a topology that was similar to earlier studies, but with little additional resolution or confidence. -
2017REN1B041.Pdf
ANNÉE 2017 THÈSE / UNIVERSITÉ DE RENNES 1 sous le sceau de l’Université Bretagne Loire pour le grade de DOCTEUR DE L’UNIVERSITÉ DE RENNES 1 Mention : Biologie et Sciences de la Santé Ecole doctorale Ecologie, Géosciences, Agronomie ALimentation Alice GADEA Préparée dans l’unité de recherche UMR CNRS 6553 EcoBio - PHENOME Ecosystèmes, Biodiversité, Evolution - UFR des Sciences de la Vie et de l’Environnement et dans l’unité de recherche UMR CNRS 6226 ISCR - CORINT Institut des Sciences Chimiques de Rennes - Faculté de Pharmacie Thèse soutenue à Rennes Lichens et le 11 décembre 2017 devant le jury composé de : Gastéropode du Catherine LEBLANC Directrice de Recherche au CNRS, Station Biologique Subantarctique : de Roscoff / rapporteur Olivier GROVEL Professeur à l’Université de Nantes / rapporteur Ecologie chimique et Martin GRUBE Professeur à l’Université de Graz, Autriche / examinateur relations trophiques Luc MADEC Professeur à l’Université de Rennes 1 / examinateur Anne-Cécile LE LAMER Maître de Conférences à l’Université de Toulouse 3 / Examinatrice Françoise LOHEZIC-LE DEVEHAT Maître de Conférences à l’Université de Rennes 1 / Examinatrice Joël BOUSTIE Professeur à l’Université de Rennes 1 / Co-directeur de thèse Maryvonne CHARRIER Maître de Conférences à l’Université de Rennes 1 / Directrice de thèse Lexique de lichnologie Apothécie : organe produit par le mycobiote permettant la reproduction sexuée du lichen par la production de spores. Céphalodie : Petit organe bien délimité, soit à l’intérieur du thalle, soit émergent en petite excroissance à la surface de celui-ci, contenant les cyanobactéries lorsqu’elles sont présentes en tant que photosymbiote secondaire. Cordon axial : Ensemble d’hyphes très serrés parallèles à l’axe, formant un cordon très résistant dans la partie centrale du thalle (essentiellement chez les usnées). -
Overcoming Deterrent Metabolites by Gaining Essential Nutrients a Lichen
Overcoming deterrent metabolites by gaining essential nutrients A lichen/snail case study Alice Gadea, Maryvonne Charrier, Mathieu Fanuel, Philippe Clerc, Corentin Daugan, Aurélie Sauvager, Hélène Rogniaux, Joël Boustie, Anne-Cécile Le Lamer, Françoise Lohezic-Le Devehat To cite this version: Alice Gadea, Maryvonne Charrier, Mathieu Fanuel, Philippe Clerc, Corentin Daugan, et al.. Overcom- ing deterrent metabolites by gaining essential nutrients A lichen/snail case study. Phytochemistry, Elsevier, 2019, 164, pp.86-93. 10.1016/j.phytochem.2019.04.019. hal-02150227 HAL Id: hal-02150227 https://hal-univ-rennes1.archives-ouvertes.fr/hal-02150227 Submitted on 18 Feb 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Title page Overcoming deterrent metabolites by gaining essential nutrients: a lichen/snail case study 1 Gadea Alice a,b, Charrier Maryvonne b, Fanuel Mathieu c, Clerc Philippe d, Daugan Corentin a, Sauvager 2 Aurélie a, Rogniaux Hélène c, Boustie Joël a, Le Lamer Anne-Cécile e¥ and Lohézic – Le Devehat Françoise 3 a*¥ 4 5 a Univ Rennes, -
Revue D'ecologie
Revue d’Ecologie (Terre et Vie), Suppt 12 « Espèces invasives », 2015 : 28-32 CHARACTERIZATION OF THE HABITATS COLONIZED BY THE ALIEN GROUND BEETLE MERIZODUS SOLEDADINUS AT THE KERGUELEN ISLANDS 1* 2 3 1 1 D. RENAULT , M. CHEVRIER , M. LAPARIE , P. VERNON & M. LEBOUVIER 1 Université de Rennes 1, UMR CNRS 6553 Ecobio, 263 avenue du Gal Leclerc. F-35042 Rennes, France. E-mails: [email protected]; [email protected]; [email protected] 2 Station Biologique de Paimpont, Université de Rennes 1, UMR CNRS 6553 Ecobio. F-35380 Paimpont, France. E- mail: [email protected]; 3 UR0633, Unité de Recherche Zoologie Forestière, INRA, 2163 Avenue de la Pomme de Pin, CS 40001 Ardon, 45075 Orléans, France. E-mail: [email protected] * Corresponding author. Tél: + 33 2 23 23 66 27; Fax: + 33 2 23 23 50 26 RÉSUMÉ.— Caractérisation des habitats colonisés par le coléoptère terrestre allochtone Merizodus soledadinus aux îles Kerguelen.— Dans le présent travail, nous avons conduit une étude de terrain visant à identifier les habitats colonisés par Merizodus soledadinus, un coléoptère terrestre allochtone afin de comprendre sa dynamique spatiale aux îles Kerguelen. Nous avons pratiqué un piégeage régulier dans plusieurs habitats côtiers sur l’île Haute, combiné à des recherches actives et opportunistes de cette espèce dans d’autres sites de cet archipel subantarctique. Au total 1081 sites ont été visités, et nos données ont révélé que les adultes de M. soledadinus se rencontrent très souvent sur la partie supérieure des estrans (372/540 obs., i.e. -
Heard and Mcdonald Islands Australia
HEARD AND MCDONALD ISLANDS AUSTRALIA Heard Island and the McDonald Islands are in the Southern Ocean, approximately 4,100 km south- west of Perth and 1,700 km from the Antarctic continent. Their distinctive conservation value is as one of the world’s rare pristine island ecosystems which have virtually no record of alien species and minimal human impact; also as the only volcanically active subantarctic islands they provide a window into ongoing tectonic activity, geomorphic processes and glacial dynamics. COUNTRY Australia NAME Heard and McDonald Islands NATURAL WORLD HERITAGE SERIAL SITE 1997: Inscribed on the World Heritage List under Natural Criteria viii and ix. STATEMENT OF OUTSTANDING UNIVERSAL VALUE [pending] The UNESCO World Heritage Committee issued the following statement at the time of inscription: Justification for Inscription The Committee inscribed this property under criteria (viii) and (ix). It noted that this site is the only volcanically active sub-Antarctic island and illustrates ongoing geomorphic processes and glacial dynamics in the coastal and submarine environment and sub-Antarctic flora and fauna, with no record of alien species. The Committee repeated its request by the sixteenth session for further documentation on the marine resources of the site. IUCN MANAGEMENT CATEGORY 1a Strict Nature Reserve BIOGEOGRAPHICAL PROVINCE Insulantarctica (7.4.9) GEOGRAPHICAL LOCATION Located in the southern Indian Ocean 4,100 km south-west of Australia and 1,700 km north of Mawson Base, Antarctica. Heard Island is at 53°06'S by 73°30'E with the McDonald Islands 43.5 km west of it at 53°03'S by 72°36'E. -
South, Tasmania
Biodiversity Summary for NRM Regions Guide to Users Background What is the summary for and where does it come from? This summary has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. It highlights important elements of the biodiversity of the region in two ways: • Listing species which may be significant for management because they are found only in the region, mainly in the region, or they have a conservation status such as endangered or vulnerable. • Comparing the region to other parts of Australia in terms of the composition and distribution of its species, to suggest components of its biodiversity which may be nationally significant. The summary was produced using the Australian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. The list of families covered in ANHAT is shown in Appendix 1. Groups notnot yet yet covered covered in inANHAT ANHAT are are not not included included in the in the summary. • The data used for this summary come from authoritative sources, but they are not perfect.