Engineered Approaches to in Situ Bioremediation of Chlorinated Solvents: Fundamentals and Field Applications EPA 542-R-00-008 July 2000 (Revised)
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Aerobic Cometabolism of Chlorinated Aliphatic Hydrocarbons by Subsurface Microbes Grown on Methane, Propane and Butane from the Mcclellan Air Force Base
AN ABSTRACT OF THE THESIS OF Adisorn Tovanabootr for the degree of Masters of Science in Civil Engineering presented on April 23, 1997. Title: Aerobic Cometabolism of Chlorinated Aliphatic Hydrocarbons by Subsurface Microbes Grown on Methane, Propane and Butane from the McClellan Air Force Base. Abstract approved: Lewis Semprini Subsurface microorganisms from the McClellan Air Force Base were grown in batch aquifer microcosms on methane, propane, and butane as gaseous cometabolic substrates. The potential for aerobic cometabolism of chlorinated aliphatic hydrocarbons including trichloroethylene (TCE), 1,1,1-trichloroethane (1,1,1-TCA), and chloroform (CF) was determined. Stimulation of microorganisms on all of the substrates tested indicates a diverse microbial community exists in the McClellan subsurface. Indigenous methane and propane-utilizers were capable of transforming TCE and CF. Propane- utilizers very effectively transformed TCA, while methane-utilizers could not transform 1,1,1-TCA. The butane-utilizers were not able to degrade any of the CAHs tested. TCE was transformed most rapidly during the period of active methane consumption, and continued at a slower rate for about 1 weeks after methane was consumed. The propane culture remained active for up to four weeks after propane was consumed, and the rate followed first order kinetics. Different TCE transformation yields (Tv) (mg CAH/mg substrate) developed in replicate microcosms with time. Changes in TCE transformation ability resulted from changes in TCE concentration or TCE product toxicity. Both methane and propane-utilizers showed a positive correlation between initial TCE transformation rates and primary substrate utilization rates. The ratio of the zero order TCE transformation rate to primary substrate utilization rate was directly proportional to the ultimate transformation yield. -
Biochemistry and Physiology of Halorespiration by Desulfitobacterium Dehalogenans
Biochemistry and Physiology of Halorespiration by Desulfitobacterium dehalogenans ..?.^TJ?*LE_ LANDBOUWCATALOGU S 0000 0807 1728 Promotor: Dr.W.M . deVo s hoogleraar in de microbiologie Co-promotoren: Dr.ir .A.J.M .Stam s universitair hoofddocent bij deleerstoelgroe p Microbiologie Dr.ir . G. Schraa universitair docent bij deleerstoelgroe p Microbiologie Stellingen 1. Halorespiratie is een weinig efficiente wijze van ademhalen. Dit proefschrift 2. Halorespiratie moet worden opgevat als verbreding en niet als specialisatie van het genus Desulfitobacterium. Dit proefschrift 3. Reductieve dehalogenases zijn geen nieuwe enzymen. 4. 16S-rRNA probes zijn minder geschikt voor het aantonen van specifieke metabole activiteiten in een complex ecosysteem. Loffler etal. (2000) AEM66 : 1369;Gottscha l &Kroonema n (2000)Bode m3 : 102 5. Het "twin-arginine" transportsysteem wordt niet goed genoeg begrepen om op basis van het voorkomen van het "twin-arginine" motief enzymen te lokaliseren. Berks etal. (2000)Mol .Microbiol .35 : 260 6. Asbesthoudende bodem is niet verontreinigd. 7. Biologische groente is een pleonasme. Stellingen behorende bij het proefschrift 'Biochemistry and physiology of halorespiration by Desulfitobacterium dehalogenans' van Bram A. van de Pas Wageningen, 6 december 2000 MJOQ^O \lZ°]0 ^ Biochemistry and Physiology of Halorespiration by Desulfitobacterium dehalogenans BramA. van de Pas Proefschrift ter verkrijging van de graad van doctor op gezag van derecto r magnificus van Wageningen Universiteit, dr. ir. L. Speelman, in het openbaar -
Technical Protocol for Evaluating Natural Attenuation of Chlorinated
United States Office of Research and EPA/600/R-98/128 Environmental Protection Development September 1998 Agency Washington DC 20460 Technical Protocol for Evaluating Natural Attenuation of Chlorinated Solvents in Ground Water TECHNICAL PROTOCOL FOR EVALUATING NATURAL ATTENUATION OF CHLORINATED SOLVENTS IN GROUND WATER by Todd H. Wiedemeier Parsons Engineering Science, Inc. Pasadena, California Matthew A. Swanson, David E. Moutoux, and E. Kinzie Gordon Parsons Engineering Science, Inc. Denver, Colorado John T. Wilson, Barbara H. Wilson, and Donald H. Kampbell United States Environmental Protection Agency National Risk Management Research Laboratory Subsurface Protection and Remediation Division Ada, Oklahoma Patrick E. Haas, Ross N. Miller and Jerry E. Hansen Air Force Center for Environmental Excellence Technology Transfer Division Brooks Air Force Base, Texas Francis H. Chapelle United States Geological Survey Columbia, South Carolina IAG #RW57936164 Project Officer John T. Wilson National Risk Management Research Laboratory Subsurface Protection and Remediation Division Ada, Oklahoma NATIONAL RISK MANAGEMENT RESEARCH LABORATORY OFFICE OF RESEARCH AND DEVELOPMENT U. S. ENVIRONMENTAL PROTECTION AGENCY CINCINNATI, OHIO 45268 i NOTICE The information in this document was developed through a collaboration between the U.S. EPA (Subsurface Protection and Remediation Division, National Risk Management Research Laboratory, Robert S. Kerr Environmental Research Center, Ada, Oklahoma [SPRD]) and the U.S. Air Force (U.S. Air Force Center for Environmental Excellence, Brooks Air Force Base, Texas [AFCEE]). EPA staff were primarily responsible for development of the conceptual framework for the approach presented in this document; staff of the U.S. Air Force and their contractors also provided substantive input. The U.S. Air Force was primarily responsible for field testing the approach presented in this document. -
Cometabolic Degradation of Polycyclic Aromatic Hydrocarbons (Pahs) and Aromatic Ethers by Phenol- and Ammonia-Oxidizing Bacteria
AN ABSTRACT OF THE DISSERTATION OF Soon Woong Chang for the degree of Doctor of Philosophy in Civil Engineering presented on November 11, 1997. Title: Cometabolic Degradation of Polycyclic Aromatic Hydrocarbons (PAHs) and Aromatic Ethers by Phenol- and Ammonia-Oxidizing Bacteria Redacted for Privacy Abstract approved: /Kenneth J. Williamson Cometabolic biodegradation processes are potentially useful for the bioremediation of hazardous waste sites. In this study the potential application of phenol- oxidizing and nitrifying bacteria as "priming biocatalysts" was examined in the degradation of polycyclic aromatic hydrocarbons (PAHs), aryl ethers, and aromatic ethers. We observed that a phenol-oxidizing Pseudomonas strain cometabolically degrades a range of 2- and 3-ringed PAHs. A sequencing batch reactor (SBR) was used to overcome the competitive effects between two substrates and the SBR was evaluated as a alternative technology to treat mixed contaminants including phenol and PAHs. We also have demonstrated that the nitrifying bacterium Nitrosomonas europaea can cometabolically degrade a wide range polycyclic aromatic hydrocarbons (PAHs), aryl ethers and aromatic ethers including naphthalene, acenaphthene, diphenyl ether, dibenzofuran, dibenzo-p-dioxin, and anisole. Our results indicated that all the compounds are transformed by N. europaea and that several unusual reactions are involved in these reactions. In the case of naphthalene oxidation, N. europaea generated predominantly 2 naphthol whereas other monooxygenases generate 1-naphthol as the major product. In the case of dibenzofuran oxidation, 3-hydroxydibenzofuran initially accumulated in the reaction medium and was then further transformed to 3-hydroxy nitrodibenzofuran in a pH- and nitrite-dependent abiotic reaction. A similar abiotic transformation reaction also was observed with other hydroxylated aryl ethers and PAHs. -
A Model of in Situ Bioremediation That Includes the Effect of Rate- Limited Sorption and Bioavailability J
A MODEL OF IN SITU BIOREMEDIATION THAT INCLUDES THE EFFECT OF RATE- LIMITED SORPTION AND BIOAVAILABILITY J. Huang and M.N. Goltz Department of Engineering and Environmental Management, Air Force Institute of Technol- ogy, Wright-Patterson Air Force Base, OH 45433-7765; Phone: (937) 255-2998, Fax: (937) 656-4699 ABSTRACT In situ bioremediation is a groundwater and soil remediation technology that makes use of indigenous or introduced microorganisms to degrade contaminants in the subsurface. One factor affecting the feasibility of in situ bioremediation is the availability of the contaminant to the microorganisms. It is typically assumed that the contaminant is only available for biodegradation in the aqueous phase. However, many organic contami- nants of interest are sorbed to soil in the subsurface, and the sorbed contaminant is presumably unavailable for bioremediation. If bioremediation is attempted, the rate of desorption of contaminant from the sorbed phase is a factor in determining the availability of the contaminant to the degrading microorganisms and hence, the efficacy of the remediation. In this work, a transport model is presented that accounts for both biodegradation and desorption kinetics. The model is run using realistic parameter values obtained from a recent field evaluation of in situ aerobic cometabolic bioremediation at Edwards AFB, to demonstrate the potential impact of rate-limited sorption on bioremediation efficacy. The model allows remediation managers to better understand the impact of the in situ bioremediation technology on the fate and transport of contaminants, ultimately helping these managers design and implement solutions to contamination problems. Key words: modeling, bioavailability, sorption, cometabolism, bioremediation BACKGROUND In situ bioremediation is a technology that is currently being studied (and increasingly imple- mented) in the hope that it may be useful in remediating the nations hazardous waste sites. -
Electron Donor and Acceptor Utilization by Halorespiring Bacteria'
Electron donor andaccepto r utilizationb y halorespiring bacteria Maurice L.G.C. Luijten CENTRALS LANDBOUWCATALOGUS 0000 0950 9080 Promotoren Prof.dr .W.M . de Vos Hoogleraar ind eMicrobiologi c Wageningen Universiteit Prof.dr .ir .A.J.M .Stam s Persoonlijk hoogleraar bij hetlaboratoriu mvoo r Microbiologic Laboratorium voor Microbiologic, Wageningen Universiteit Copromotoren Dr.G .Schra a Universitair docent Laboratorium voor Microbiologic, Wageningen Universiteit Dr.A.A.M . Langenhoff Senior researcher/project leader Milieubiotechnologie, TNO-MEP Promotiecommissie Prof. E.J.Bouwe r John's Hopkins University, Baltimore, USA Prof.dr .C .Hollige r EPFL, Lausanne, Switzerland Dr.F .Volkerin g Tauw bv, Deventer, Nederland Prof. dr.ir .W.H . Rulkens Wageningen Universteit Dit onderzoek is uitgevoerd binnen de onderzoekschool SENSE (Netherlands Research School forth e Socio-Economic andNatura l Sciences ofth e Environment). LV''-:- v. •:-:::'.Ifir Electron donor and acceptor utilizationb y halorespiring bacteria Maurice L.G.C.Luijte n Proefschrift Terverkrijgin g van de graadva n doctor opgeza gva n derecto r magnificus van Wageningen Universiteit, prof. dr. ir. L. Speelman, inhe t openbaar te verdedigen opvrijda g 11 juni 2004 desnamiddag s te half twee in deAula . \ '\ i ocXi ^ Electron donor and acceptor utilization byhalorespirin g bacteria Maurice L.G.C. Luijten Ph.D.thesi sWageninge n University, Wageningen, The Netherlands 2004 ISBN 90-5804-067-1 Front cover: Modified EMpictur e ofSulfurospirillum halorespirans PCE-M2 — ry ' Stellingen 1.El k nadeel heb zijn voordeel. Dit proefschrift. 2. De ene volledige reductie van PCE is de andere nog niet. Dit proefschrift. 3. Sectorale communicatie reikt niet ver genoeg. HRH the Prince of Orange, Wat. -
Detection of Dehalococcoides Spp. by Peptide Nucleic Acid Fluorescent in Situ Hybridization
This article was published in Journal of Molecular Microbiology and Biotechnology, 24, 142- 149, 2014 http://dx.doi.org/10.1159/000362790 Detection of Dehalococcoides spp. by Peptide Nucleic Acid Fluorescent in situ Hybridization Anthony S. Dankoa, c Silvia J. Fonteneteb Daniel de Aquino Leiteb, e Patrícia O. Leitãoa,c Carina Almeidab, d Charles E. Schaeferf Simon Vainbergf Robert J. Steffanf Nuno F. Azevedob aCentro de Investigação em Geo-Ambiente e Recursos (CIGAR), Departamento de Engenharia de Minas, Faculdade de Engenharia, and bLaboratory for Process Engineering, Environment, and Energy and Biotechnology Engineering (LEPABE), Department of Chemical Engineering, Faculty of Engineering, University of Porto, Porto, cCentro de Recursos Naturais e Ambiente (CERENA), Instituto Superior Técnico, Lisboa, and dInstitute for Biotechnology and Bioengineering (IBB), Center of Biological Engineering, Universidade do Minho, Braga, Portugal; eLANASE, Departamento de Engenharia de Alimentos, Faculdade de Engenharia, Universidade Federal da Grande Dourados, Dourados, Brazil; fCB&I Federal Services, LLC., Lawrenceville, N.J., USA Abstract Chlorinated solvents including tetrachloroethene (perchloroethene and trichloroethene), are widely used industrial solvents. Improper use and disposal of these chemicals has led to a widespread contamination. Anaerobic treatment technologies that utilize Dehalococcoides spp. can be an effective tool to remediate these contaminated sites. There- fore, the aim of this study was to develop, optimize and validate peptide nucleic acid (PNA) probes for the detection of Dehalococcoides spp. in both pure and mixed cultures. PNA probes were designed by adapting previously published DNA probes targeting the region of the point mutations de- scribed for discriminating between the Dehalococcoides spp. strain CBDB1 and strain 195 lineages. -
Evaluation of the Role of Dehalococcoides Organisms in the Natural Attenuation of Chlorinated Ethylenes in Ground Water
Evaluation of the Role of Dehalococcoides Organisms in the Natural Attenuation of Chlorinated Ethylenes in Ground Water EPA/600/R-06/029 July 2006 Evaluation of the Role of Dehalococcoides Organisms in the Natural Attenuation of Chlorinated Ethylenes in Ground Water Xiaoxia Lu National Research Council Post Doctoral Associate tenable at the U.S. Environmental Protection Agency Office of Research and Development National Risk Management Laboratory Ada, Oklahoma 74820 Donald H. Kampbell, and John T. Wilson U.S. Environmental Protection Agency Office of Research and Development National Risk Management Laboratory Ada, Oklahoma 74820 Support from the U.S. Air Force Center for Environmental Excellence through Interagency Agreement # RW-57939566 Project Officer John T. Wilson Ground Water and Ecosystems Restoration Division National Risk Management Research Laboratory Ada, Oklahoma 74820 National Risk Management Research Laboratory Office of Research and Development U.S. Environmental Protection Agency Cincinnati, Ohio 45268 Notice The U.S. Environmental Protection Agency through its Office of Research and Development funded the research described here. This work was conducted under in-house Task 3674, Monitored Natural Attenuation of Chlorinated Solvents, and in association with and with support from the U.S. Air Force Center for Environmental Excellence through Interagency Agreement # RW-57939566, Identification of Processes that Control Natural Attenuation at Chlorinated Solvent Spill Sites. Mention of trade names and commercial products does not constitute endorsement or recommendation for use. All research projects making conclusions and recommendations based on environmentally related measurements and funded by the U.S. Environ- mental Protection Agency are required to participate in the Agency Quality Assurance Program. -
Pseudomonas Aeruginosa Strain MA01 Aerobically Metabolizes The
Pseudomonas aeruginosa st rain MA01 aerobically metabolizes the aminodinitrotoluenes produced by 2,4,6=trinitrotoluenenitro group reduct ion Marc A. Alvarez, Christopher L. Kitts, James L. Botsford, and Pat J. Unkefer Abstract:Many microbes reduce the nitro substituents of 2,4,6-trinitrotoluene(TNT), producing aminodinitrotoluenes(ADNTs). These compounds are recalcitrant to further breakdown and are acutely toxic. In a search for organisms capable of metabolizing ADNTs, a bacterial strain was isolated for the ability to use 2-aminobenzoate (anthranilate) as sole C-source. This isolate, Pseudomonas aeruginosa MAO1, metabolized TNT by first reducing one nitro group to form either 2-amino-4,6-dinitrotoluene (2ADNT) or 4 -amino-2,6-dinitrotoluene(4ADNT). However, strain MA01 was distinct from other TNT-reducing organisms in that it transformed these compounds into highly polar metabolites through an 02-dependent process. Strain MAOl was able to cometabolize TNT, 2ADNT, and 4ADNT in the presence of a variety of carbon and energy sources. During aerobic cometabolism with succinate, 45% of uniformly ring-labeled [14C]TNT was transformed to highly polar compounds. Aerobic cometabolism of purified [14C]2ADN~and [14C]4ADNT with succinate as C-source produced similar amounts of these polar metabolites. During 02-limited cometabolism with succinate as C-source and nitrate as electron acceptor, less than 8% of the [14C]TNT was transformed to polar metabolites. Purified 2,6-diamino-4 -nitrotoluene was not metabolized, and while 2,4-diamino-6-nitrotoluenewas acetylated, the product (N-acetyl-2,4-diamino-6-nitrotoluene)was not further metabolized. Therefore, strain MAOl metabolized TNT by oxidation of the ADNTs and not by reduction the remaining nitro groups on the ADNTs. -
Guidelines: Natural Attenuation of Chlorinated Solvents in Ground Water
GUIDELINES NATURAL ATTENUATION OF CHLORINATED SOLVENTS IN GROUND WATER MINNESOTA POLLUTION CONTROL AGENCY SITE REMEDIATION SECTION © Minnesota Pollution Control Agency 2006 © Minnesota Pollution Control Agency 2006 TABLE OF CONTENTS EXECUTIVE SUMMARY ................................................................................................................................... III 1.0 SCREENING FOR NATURAL ATTENUATION.......................................................................................5 Screening for chlorinated ethylenes ...................................................................................................................7 Screening for contaminants other than chlorinated ethylenes.........................................................................8 2.0 DETAILED SITE CHARACTERIZATION: REFINEMENT OF THE SITE CONCEPTUAL MODEL...................................................................................................................................................................10 3.0 RATE ANALYSIS: ESTIMATES OF SITE-SPECIFIC ATTENUATION KINETICS ........................11 3.1 Falling contaminant concentrations: source decay terms......................................................................11 3.2 Groundwater attenuation rates and biodegradation rate (lambda) calculations................................12 3.3 Calculation of a natural attenuation capacity term ...............................................................................13 4.0 ABIOTIC DEGRADATION.........................................................................................................................14 -
Degradation of Polycyclic Aromatic Hydrocarbon by Pure Strain Isolated from Municipal Sludge: Synergistic and Cometabolism Phenomena
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by UTHM Institutional Repository International Conference on Environment 2010 (ICENV 2010) DEGRADATION OF POLYCYCLIC AROMATIC HYDROCARBON BY PURE STRAIN ISOLATED FROM MUNICIPAL SLUDGE: SYNERGISTIC AND COMETABOLISM PHENOMENA N. OTHMAN1,3, N. HUSSAIN2, S. ABDUL-TALIB3 1Engineering Faculty of Civil and Environmental Engineering, Universiti Tun Hussein Onn Malaysia, 86400 B.Pahat, Johor. Malaysia 2Faculty of Applied Science, Universiti Teknologi MARA, 40450 Shah Alam, Selangor. Malaysia 3Faculty of Civil Engineering, Universiti Teknologi MARA, 40450 Shah Alam, Selangor. Malaysia E-mail: [email protected] ABSTRACT Polycyclic aromatic hydrocarbons are classed as potentially hazardous chemicals of environmental and health concern. Some PAHs exhibit carcinogenic and mutagenic properties and are listed by the USEPA as priority pollutants. The principle process for the successful removal and elimination of PAHs from contaminated environment is microbial degradation. Many studies from temperate countries had reported on biodegradation of PAHs using microbial from petroleum contaminated area but limited information could be found from other medium. Thus, the previous studies have not investigated in detail the interaction among PAHs during biodegradation. This study was carried out to isolate PAHs degrading bacteria from municipal sludge and to determine the effect of enrichment substrate and PAH degradative bacteria activities during degradation of PAHs. Several microorganisms were isolated from municipal sludge for their ability to mineralize PAHs as sole carbon and energy source. Enrichment method process utilised single PAHs as a sole source of carbon. The pure culture was identified using the Biolog system. Biodegradation experiment was performed using 250 ml reactor flasks containing 50ml minimal media, 10% of bacterial inoculum and the specific PAHs. -
Final Report Use of Cometabolic Air Sparging to Remediate
Final Report Use of Cometabolic Air Sparging to Remediate Chloroethene-Contaminated Groundwater Aquifers by Battelle 505 King Avenue Columbus, OH 43201 July 31, 2001 CONTENTS FIGURES....................................................................................................................................... iv TABLES ......................................................................................................................................... v ABBREVIATIONS AND ACRONYMS...................................................................................... vi ACKNOWLEDGEMENTS.........................................................................................................viii 1. Introduction................................................................................................................................ 1 1.1 Background Information.................................................................................................... 1 1.2 Official DoD Requirements Statements............................................................................. 2 1.3 Objectives of the Demonstration ....................................................................................... 3 1.4 Regulatory Drivers............................................................................................................. 3 1.5 Previous Testing of the Technology .................................................................................. 4 2. Technology Description............................................................................................................