SPEX Certiprep Guide to Terpene Chemical Properties
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Molecular Regulation of Plant Monoterpene Biosynthesis in Relation to Fragrance
Molecular Regulation of Plant Monoterpene Biosynthesis In Relation To Fragrance Mazen K. El Tamer Promotor: Prof. Dr. A.G.J Voragen, hoogleraar in de Levensmiddelenchemie, Wageningen Universiteit Co-promotoren: Dr. ir. H.J Bouwmeester, senior onderzoeker, Business Unit Celcybernetica, Plant Research International Dr. ir. J.P Roozen, departement Agrotechnologie en Voedingswetenschappen, Wageningen Universiteit Promotiecommissie: Dr. M.C.R Franssen, Wageningen Universiteit Prof. Dr. J.H.A Kroeze, Wageningen Universiteit Prof. Dr. A.J van Tunen, Swammerdam Institute for Life Sciences, Universiteit van Amsterdam. Prof. Dr. R.G.F Visser, Wageningen Universiteit Mazen K. El Tamer Molecular Regulation Of Plant Monoterpene Biosynthesis In Relation To Fragrance Proefschrift ter verkrijging van de graad van doctor op gezag van de rector magnificus van Wageningen Universiteit, Prof. dr. ir. L. Speelman, in het openbaar te verdedigen op woensdag 27 november 2002 des namiddags te vier uur in de Aula Mazen K. El Tamer Molecular Regulation Of Plant Monoterpene Biosynthesis In Relation To Fragrance Proefschrift Wageningen Universiteit ISBN 90-5808-752-2 Cover and Invitation Design: Zeina K. El Tamer This thesis is dedicated to my Family & Friends Contents Abbreviations Chapter 1 General introduction and scope of the thesis 1 Chapter 2 Monoterpene biosynthesis in lemon (Citrus limon) cDNA isolation 21 and functional analysis of four monoterpene synthases Chapter 3 Domain swapping of Citrus limon monoterpene synthases: Impact 57 on enzymatic activity and -
Retention Indices for Frequently Reported Compounds of Plant Essential Oils
Retention Indices for Frequently Reported Compounds of Plant Essential Oils V. I. Babushok,a) P. J. Linstrom, and I. G. Zenkevichb) National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA (Received 1 August 2011; accepted 27 September 2011; published online 29 November 2011) Gas chromatographic retention indices were evaluated for 505 frequently reported plant essential oil components using a large retention index database. Retention data are presented for three types of commonly used stationary phases: dimethyl silicone (nonpolar), dimethyl sili- cone with 5% phenyl groups (slightly polar), and polyethylene glycol (polar) stationary phases. The evaluations are based on the treatment of multiple measurements with the number of data records ranging from about 5 to 800 per compound. Data analysis was limited to temperature programmed conditions. The data reported include the average and median values of retention index with standard deviations and confidence intervals. VC 2011 by the U.S. Secretary of Commerce on behalf of the United States. All rights reserved. [doi:10.1063/1.3653552] Key words: essential oils; gas chromatography; Kova´ts indices; linear indices; retention indices; identification; flavor; olfaction. CONTENTS 1. Introduction The practical applications of plant essential oils are very 1. Introduction................................ 1 diverse. They are used for the production of food, drugs, per- fumes, aromatherapy, and many other applications.1–4 The 2. Retention Indices ........................... 2 need for identification of essential oil components ranges 3. Retention Data Presentation and Discussion . 2 from product quality control to basic research. The identifi- 4. Summary.................................. 45 cation of unknown compounds remains a complex problem, in spite of great progress made in analytical techniques over 5. -
Variation in the Composition of the Essential Oil of Valeriana Officinalis L
Proc. Estonian Acad. Sci. Chem., 2007, 56, 2, 67–74 Variation in the composition of the essential oil of Valeriana officinalis L. roots from Estonia Ain Raala, Anne Oravb*, Elmar Araka, Tiiu Kailasb, and Mati Müüriseppb a Institute of Pharmacy, University of Tartu, Nooruse 1, 50411 Tartu, Estonia b Institute of Chemistry, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia Received 31 January 2007, in revised form 12 March 2007 Abstract. The volatile constituents from roots of Valeriana officinalis L. were investigated using GC and GC/MS methods. Valerianae radix samples were obtained from retail pharmacies or cultivated in Estonia. The roots of five V. officinalis samples yielded 0.28–1.16% essential oil in the cut drug, which usually corresponded (four samples) to the European Pharmacopeia standard (0.3%). The basic oil components among the identified 84 compounds were isovaleric acid (0–2.1%), α-pinene (0.4–3.6%), α-fenchene (0.6–5.8%), camphene (0.6–5.9%), bornyl acetate (8.8–33.7%), myrtenyl acetate (2.0–7.2%), alloaromadendrene (0.3–7.6%), myrtenyl isovalerate (1.1–2.5%), spathulenol (0.7–4.1%), sesquiterpene alcohol (0.8–6.6%), valerianol (0.3–16.7%), valeranone (0.5–9.4%), and valerenal (tr–14.7%). Valerian root oil from Estonia (four samples) was rich in bornyl acetate and valerenal. Bornyl acetate, valerianol, and valeranone dominated in one Estonian sample. Key words: Valeriana officinalis L., essential oil, bornyl acetate, valerenal, valerianol, valeranone. INTRODUCTION Valerian (Valeriana officinalis L.) is a well-known and frequently used medicinal plant, which has a long proven history of efficacy. -
And Their OH Reactivity in Various Agro-Ecosystems Sandy Bsaibes
Characterization of biogenic volatile organic compounds (BVOCs) and their OH reactivity in various agro-ecosystems Sandy Bsaibes To cite this version: Sandy Bsaibes. Characterization of biogenic volatile organic compounds (BVOCs) and their OH reactivity in various agro-ecosystems. Global Changes. Université Paris-Saclay, 2019. English. NNT : 2019SACLV093. tel-02614381 HAL Id: tel-02614381 https://tel.archives-ouvertes.fr/tel-02614381 Submitted on 20 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Characterization of biogenic volatile organic compounds and their OH reactivity in various : 2019SACLV093 agro-ecosystems NNT Thèse de doctorat de l’Université Paris-Saclay Préparée à l’Université de Versailles Saint-Quentin-en-Yvelines Ecole doctorale n°129 Sciences de l’Environnement d’île-de-France (SEIF) Spécialité de doctorat : chimie atmosphérique Thèse présentée et soutenue à Gif-sur-Yvette, le 12 Décembre 2019 par Sandy Bsaibes Composition du Jury : Didier Hauglustaine Directeur de Recherche, LSCE, CNRS Président Agnès Borbon Chargée de Recherche, LaMP, CNRS Rapporteur Jonathan Williams Senior Scientist, MPIC Rapporteur Corinne Jambert Maître de conférences, LA Examinateur Benjamin Loubet Directeur de Recherche, Ecosys, INRA Examinateur Valérie Gros Directeur de Recherche, LSCE, CNRS Directeur de thèse Contents Acknowledgements .............................................................................................................................. -
Sesquiterpenoids and Phenolics from Crepis Conyzifolia
Sesquiterpenoids and Phenolics from Crepis conyzifolia Wanda Kisiel* and Klaudia Michalska Department of Phytochemistry, Institute of Pharmacology, Polish Academy of Sciences, Pl-31-343 Krakow, Poland. Fax: +48 126374500. E-mail: [email protected] * Author for correspondence and reprint requests Z. Naturforsch. 56c, 961-964 (2001); received July 30/August 28, 2001 Crepis conyzifolia, Sesquiterpenoids, Phenolics From the roots of Crepis conyzifolia, two new and two known guaianolides were isolated together with three known phenylpropanoids. Structures of the new compounds were estab lished as 8ß-hydroxy-4ß, 15-dihydrozaluzanin C and 4ß, 15, llß, 13-tetrahydrozaluzanin C-3- O-ß-glucopyranoside by spectral methods. The identity of 8 -epiisolippidiol and dentalactone was also discussed. Introduction previously isolated from Crepis and Lactuca spe cies in our laboratory (Kisiel, 1983; Kisiel and Screening tests for potential anticancer agents Barszcz, 1995; Kisiel and Barszcz, 1997; Kisiel et from natural sources showed that crude alcoholic al., 2000). The identity of cichoriin (7) was estab extracts from plants belonging to the tribe Lactu- lished by comparison of its spectral data with those ceae of the Asteraceae exhibited chemoprotective in the literature (Kuwajima et al., 1992). The com effects on chemical carcinogenesis and differentia pound is reported for the first time from Crepis tion-inducing activities on human leukemia and species. Since no complete XH NMR data are mause melanoma cell lines. Some bioactive triter- available for 4 (Kisiel, 1983), we have included all pene and sesquiterpene lactone constituents of the our assignments in Table I, along with unreported plant extracts were isolated and identified (Taka- 13C NMR data in CDC13 and pyridine-d5. -
Hinokitiol Production in Suspension Cells of Thujopsis Dolabrata Var
55 Original Papers Plant Tissue Culture Letters, 12(1), 55-61(1995) Hinokitiol Production in Suspension Cells of Thujopsis dolabrata var. hondai Makino Ryo FUJII, Kazuo OZAKI, Migifumi INO and Hitoshi WATANABE Integrated Technology Laboratories, Takeda Chemical Industries, Ltd. 11, Ichijoji-takenouchi-cho, Sakyo-ku, Kyoto 606 Japan (Received May 19, 1994) (Accepted October 8, 1994) Suspension cells of Thujopsis dolabrata var. hondai Makino were used as the material for studying the culture conditions by a two-step culture method (cell growth step and secondary metabolite production step) for the production of hinokitiol (Q-thujaplicin). Murashige and Skoog's (MS) medium containing N03-N and NH4-N in the ratio 3-5:1 (total nitrogen 30-75 mM) with 1.0mg/l NAA and 0.2mg/l TDZ was most desirable for cell growth (MS-O medium). The growth showed 14-fold increase after 30 days of culture in this medium. A higher ratio of NH4-N to total nitrogen resulted in hinokitiol accumulation in the cells. When the cells were transferred to the modified MS-O medium with the ratio of N03-N:NH4-N changed to 1:2 (MS-PC medium), an increase of hinokitiol level was observed. Also feeding acetates to the medium enhanced hinokitiol accumula- tion considerably. The highest hinokitiol content of 422tg/g FW was obtained when the cells were cultured in MS-O medium supplemented with 4.3mM acetic acid. Introduction An irregular monoterpene hinokitiol (B-thujaplicin) is widely present in the heartwood of the families Cupressaceae1). Hinokitiol has antimicrobial properties, and recently it has been indicated that hinokitiol suppresses ethylene synthesis and respiration of some fruits and vegetables. -
Stimulation of Deep Somatic Tissue with Capsaicin Produces Long-Lasting Mechanical Allodynia and Heat Hypoalgesia That Depends on Early Activation of the Camp Pathway
The Journal of Neuroscience, July 1, 2002, 22(13):5687–5693 Stimulation of Deep Somatic Tissue with Capsaicin Produces Long-Lasting Mechanical Allodynia and Heat Hypoalgesia that Depends on Early Activation of the cAMP Pathway K. A. Sluka Graduate Program in Physical Therapy and Rehabilitation Science, Neuroscience Graduate Program, Pain Research Program, University of Iowa, Iowa City, Iowa 52242 Pain and hyperalgesia from deep somatic tissue (i.e., muscle tissue was reversed by spinal blockade of adenylate cyclase or and joint) are processed differently from that from skin. This protein kinase A (PKA). Interestingly, mechanical allodynia was study examined differences between deep and cutaneous tis- reversed if adenylate cyclase or PKA inhibitors were adminis- sue allodynia and the role of cAMP in associated behavioral tered spinally 24 hr, but not 1 week, after injection of capsaicin. changes. Capsaicin was injected into the plantar aspect of the Spinally administered 8-bromo-cAMP resulted in a similar pat- skin, plantar muscles of the paw, or ankle joint, and responses tern, with heat hypoalgesia and mechanical allodynia occurring to mechanical and heat stimuli were assessed until allodynia simultaneously. Thus, injection of capsaicin into deep tissues resolved. Capsaicin injected into skin resulted in a secondary results in a longer-lasting mechanical allodynia and heat hy- mechanical allodynia and heat hypoalgesia lasting ϳ3hr.In poalgesia compared with injection of capsaicin into skin. The contrast, capsaicin injection into muscle or joint resulted in a mechanical allodynia depends on early activation of the cAMP long-lasting bilateral (1–4 weeks) mechanical allodynia with a pathway during the first 24 hr but is independent of the cAMP simultaneous unilateral heat hypoalgesia. -
Valencene Synthase Polypeptides, Encoding Nucleic Acid Molecules and Uses Thereof
(19) TZZ¥Z_T (11) EP 3 085 778 A1 (12) EUROPEAN PATENT APPLICATION (43) Date of publication: (51) Int Cl.: 26.10.2016 Bulletin 2016/43 C12N 9/88 (2006.01) C12P 5/00 (2006.01) C12N 15/60 (2006.01) C12N 5/10 (2006.01) (2006.01) (2006.01) (21) Application number: 16171175.9 C12N 15/82 C12P 7/26 (22) Date of filing: 11.03.2014 (84) Designated Contracting States: (72) Inventors: AL AT BE BG CH CY CZ DE DK EE ES FI FR GB • SARAN, Dayal GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO Lexington, KY (US) PL PT RO RS SE SI SK SM TR • PARK, Grace Eunyoung Lexington, KY (US) (30) Priority: 14.03.2013 US 201361852462 P (74) Representative: Rees, Kerry (62) Document number(s) of the earlier application(s) in WP Thompson accordance with Art. 76 EPC: 138 Fetter Lane 14718824.7 / 2 970 934 London EC4A 1BT (GB) (71) Applicant: Evolva, Inc. Wilmington, New Castle County, DE 19808 (US) (54) VALENCENE SYNTHASE POLYPEPTIDES, ENCODING NUCLEIC ACID MOLECULES AND USES THEREOF (57) The present invention is directed to a recom- thase polypeptide, or a catalytically active fragment binant cell that produces valencene and aristolochene, thereof. The presnt invention also provides methods of wherein the recombinant cell comprises a heterologous producing valencene and aristolochene using a recom- nucleic acid that encodes a valencene synthase polypep- binant cell of the invention and compositions comprising tide, or a catalytically active fragment thereof; or the re- valencene and aristolochene. -
Biosynthesis of Natural Products
63 2. Biosynthesis of Natural Products - Terpene Biosynthesis 2.1 Introduction Terpenes are a large and varied class of natural products, produced primarily by a wide variety of plants, insects, microoroganisms and animals. They are the major components of resin, and of turpentine produced from resin. The name "terpene" is derived from the word "turpentine". Terpenes are major biosynthetic building blocks within nearly every living creature. Steroids, for example, are derivatives of the triterpene squalene. When terpenes are modified, such as by oxidation or rearrangement of the carbon skeleton, the resulting compounds are generally referred to as terpenoids. Some authors will use the term terpene to include all terpenoids. Terpenoids are also known as Isoprenoids. Terpenes and terpenoids are the primary constituents of the essential oils of many types of plants and flowers. Essential oils are used widely as natural flavor additives for food, as fragrances in perfumery, and in traditional and alternative medicines such as aromatherapy. Synthetic variations and derivatives of natural terpenes and terpenoids also greatly expand the variety of aromas used in perfumery and flavors used in food additives. Recent estimates suggest that over 30'000 different terpenes have been characterized from natural sources. Early on it was recognized that the majority of terpenoid natural products contain a multiple of 5C-atoms. Hemiterpenes consist of a single isoprene unit, whereas the monoterpenes include e.g.: Monoterpenes CH2OH CHO CH2OH OH Myrcens -
Use the Right Citrus-Based Cleaning Products to Avoid Corrosion Or Rust Bob Beckley, Project Leader
United States Department of Agriculture Facilities Forest Service Technology & Development Program March 2006 0673–2319–MTDC 7300/7100/5100/2400/2300 Use the Right Citrus-Based Cleaning Products to Avoid Corrosion or Rust Bob Beckley, Project Leader itrus-based cleaning products are commonly found in metal on their chain saws. The crew stopped using citrus-based residential and commercial settings. The ingredients in products because they believed citric acid was causing the these products vary widely (figure 1). While some of damage. However, the damage probably was caused by a C water-based citrus cleaning product. What To Look for in a Citrus-Based Cleaning Product The Material Safety Data Sheets (MSDSs) for chemical products list their ingredients. The MSDS for a citrus-based cleaner should list D-Limonene among the ingredients. D- Limonene is in the terpene family, which includes citrus and pine oils. Terpenes are generally not corrosive or harmful to metals or most plastics and polymers. Terpenes won’t cause rusting, pitting, etching, or staining. Citrus-based terpenes can dissolve heavy petroleum greases and residues in about 30 Figure 1—Citrus-based cleaners are commonly used in residential and minutes when they are used at ambient temperatures. commercial settings, but users often are unaware of the difference between citrus oil-based cleaning products and water-based products. A citrus oil-based cleaning product will not cause corrosion these products can cause corrosion or rust, others do not. The or rust. Such products are made from the oil found in the difference is based on the ingredients. Hundreds of cleaning orange peel, rather than the pulp and juice of the orange. -
Comparison of Biogenic Volatile Organic Compound Emissions from Broad Leaved and Coniferous Trees in Turkey
Environmental Impact II 647 Comparison of biogenic volatile organic compound emissions from broad leaved and coniferous trees in Turkey Y. M. Aydin1, B. Yaman1, H. Koca1, H. Altiok1, Y. Dumanoglu1, M. Kara1, A. Bayram1, D. Tolunay2, M. Odabasi1 & T. Elbir1 1Department of Environmental Engineering, Faculty of Engineering, Dokuz Eylul University, Turkey 2Department of Soil Science and Ecology, Faculty of Forestry, Istanbul University, Turkey Abstract Biogenic volatile organic compound (BVOC) emissions from thirty-eight tree species (twenty broad leaved and eighteen coniferous) grown in Turkey were measured. BVOC samples were collected with a specialized dynamic enclosure technique in forest areas where these tree species are naturally grown. In this method, the branches were enclosed in transparent nalofan bags maintaining their natural conditions and avoiding any source of stress. The air samples from the inlet and outlet of the bags were collected on an adsorbent tube containing Tenax. Samples were analyzed using a thermal desorption (TD) and gas chromatography mass spectrometry (GC/MS) system. Sixty-five BVOC compounds were analyzed in five major groups: isoprene, monoterpenes, sesquiterpens, oxygenated sesquiterpenes and other oxygenated VOCs. Emission factors were calculated and adjusted to standard conditions (1000 μmol/m2 s photosynthetically active radiation-PAR and 30°C temperature). Consistent with the literature, broad leaved trees emitted mainly isoprene while the coniferous trees emitted mainly monoterpenes. Even though fir species are coniferous trees, they emitted significant amounts of isoprene in addition to monoterpenes. Oak species showed a large inter-species variability in their emissions. Pine species emitted mainly monoterpenes and substantial amounts of oxygenated compounds. Keywords: BVOC emissions, dynamic enclosure system, emission factor, Turkey. -
(C5–C20) Emissions of Downy Birches
Atmos. Chem. Phys., 21, 8045–8066, 2021 https://doi.org/10.5194/acp-21-8045-2021 © Author(s) 2021. This work is distributed under the Creative Commons Attribution 4.0 License. Sesquiterpenes and oxygenated sesquiterpenes dominate the VOC (C5–C20) emissions of downy birches Heidi Hellén1, Arnaud P. Praplan1, Toni Tykkä1, Aku Helin1, Simon Schallhart1, Piia P. Schiestl-Aalto2,3,4, Jaana Bäck2,3, and Hannele Hakola1 1Atmospheric Composition Research Unit, Finnish Meteorological Institute, P.O. Box 503, 00101 Helsinki, Finland 2Institute for Atmospheric and Earth System Research/Forest Sciences, Helsinki, Finland 3Faculty of Agriculture and Forestry, University of Helsinki, Helsinki, Finland 4Department of Forest Ecology and Management, SLU, 901 83 Umeå, Sweden Correspondence: Heidi Hellén (heidi.hellen@fmi.fi) Received: 2 December 2020 – Discussion started: 16 December 2020 Revised: 23 March 2021 – Accepted: 28 April 2021 – Published: 26 May 2021 Abstract. Biogenic volatile organic compounds (BVOCs) 24 % and 17 % of the total SQT and OSQT emissions, re- emitted by the forests are known to have strong impacts in spectively. A stressed tree growing in a pot was also stud- the atmosphere. However, lots of missing reactivity is found, ied, and high emissions of α-farnesene and an unidentified especially in the forest air. Therefore better characterization SQT were detected together with high emissions of GLVs. of sources and identification/quantification of unknown re- Due to the relatively low volatility and the high reactivity of active compounds is needed. While isoprene and monoter- SQTs and OSQTs, downy birch emissions are expected to pene (MT) emissions of boreal needle trees have been studied have strong impacts on atmospheric chemistry, especially on quite intensively, there is much less knowledge on the emis- secondary organic aerosol (SOA) production.