An Imported Fungal Pathogen, Filobasidiella Neoformans Var

Total Page:16

File Type:pdf, Size:1020Kb

An Imported Fungal Pathogen, Filobasidiella Neoformans Var Jpn. J. Infect. Dis., 55, 2002 Laboratory and Epidemiology Communications A (〕ueensland Koala Kept in a Japanese Zoological Park was Carrier of an Imported Fungal Pathogen, Filobasidiella neoformans var. bacillispora (Cp7PtOCOCCuS neOformans var. gattii) Koichi Makimural,2*, Mizuki Karasawa3, Humio Hosoi3, Toshiki Kobayashi3, Nanako Kamijo3, Kazuhiro Kobayashi3, Hiroshi Hiramatsu3, Takako Akikawa3, Tomoko Yabe3, Ayumi Yamaguchi3, 0samu Ishida3, Arisa Murakamil, Ryuichi Fujisakil, Yayoi Nishiyamal,2, Katsuhisa Uchidal and Hideyo Yamaguchi1,2 J Teib)o UniversityInstitute ofMedical Mycology and 2Genome Research Center;乃i砂O UniversiO), 359 0tsuka, Hachioji, Too)0 19210395 and 3Tama Zoological Park, Hodokubo 7-1-1, Hino-shi, Too;0 191-0042 Communicated by Hiroshi Yoshikura (Accepted April 8, 2002) Filobasidiella neoformans var. bacillispora (anamorph: Cf7PtOCOCCuS neOformans var. gattii) (1 ) was isolated from a Queensland koala (Phascolactos cinereus adustus) kept in a zoologlCal park in Japan. To ourknowledge, this is first isola- tion of the variant yeast from an animal or human resident in Japan. A four-yearl01d male koala (bom in the Taropga Zoo, Australia) died of various neurological disorders, 1nCluding exophthalmo.s and swelling of the back of the left eye (Fig・ 1) and appetlte loss. Yeasts were isolated as pure cultures from nose discharge and autopsy materials (brain, nasal cavity, and lung), and diagnosed as Cryptococcus neoform?ns on the basis of the characteristic thick capsules. ExaminatlOn by an assimilation test, serologlCal test, and molecular biological test (2) revealed that the yeasts were F. neoformans var. bacillispora. Cryptococcosis is one of the four life-threatenlng, deepISeated Fig. 1. Frontal view ofdecorticated head. Exophthalmos ofleft eye and swelling of the back of eye (a汀OWS) were obseⅣed. fungal infections (pulmonary cryptococcosis,竺eningoen- cephalitis, etc.) in Japan, and the infection lS generally acquired by inhalation. This species ofbasidiomycetous yeast has two varieties: a Japanese domestic variety, F. neoformans intestine (1 ). In the endemic area, this yeast has been isolated var. neoformans (serotypes A and D) (3) and oneknown only from red gum trees (EucalJPtuS SPP.) (1), rotting trees (5), as an imported mycoses-causing variety, F. neoformans var. and animals including koala (1). In the present case, the fungus bacillispora (serotypes B and C) (4). The endemic area ofF・ was not isolated from the cage, its surroundings, red gum neoformans var. bacillispora infection is geographically trees provided as feed, Or the zookeepers who had been taking restricted to troplCal countries including Australia, Brazil, care of the koala. Five other koalas kept in the same cage were Southem Califbmia, Thailand, and others (1 ). free of the symptoms of the infection. Therefore, the risk of The clinical features of the cryptococcosis caused by the the spread of the infection appeared low in the zoological park. two varieties are similar, but infection due to F. neoformans It should be noted also that deepISeated mycoses including var. bacillispora tends to requlre lengthy antifungal treatment, cryptococcosis are not usually transmitted from animal to and is associated with more neurologlCal sequelae than that human or human to human. The koala probably acquired the due.to F・ neoformans var・ neoformens (1)・ Therefore, from a infection in the Taronga Zoo in Australia, where it was bom. clinlCal polnt Of view, differentiat10n diagnosis of the two The details of the present case will be reported elsewhere. agents is important. F. neofonnans var. neofonnans is present in pigeon droppings, This study was partly supported by Health Science Research Grants for Research on Emerglng and Re-emerglng Infec- ? major so.urce of infection, but F・ neoformans var・ bacillispora lS not, aS lt is thermosensitive and cannot suⅣive in plgeOn tious Diseases from Ministry of Health, Labour and Welfare of Japan. *Co汀eSpOnding author: Tel: +8ト426-78-3256, Fax: +8 1-426-78- 3256, E-mail: [email protected] 31 Jpn. J. Infect. Dis., 55, 2002 length polymorphism. J. Jpn. Assoc. Infect. Dis., 68, REFERENCES 1512-1517. L Sorrell, T・ C・ (2001): CりPtOCOCCuS neOformans variety 4. Tsunemi, T., Kamata, T., Fumimura, Y, Watanabe, M., gattii・ Med. Myco1., 39, 1551168. Yamawaki, M・, Saito, Y, Kanda, T., Ohashi, K., Suegara, 2・ Makimura, K" Tamura, Y・, Mochizuki, T・, Hasegawa, N・, Murayama, S., Makimura, K., Yamaguchi, H. and A., Tajiri, Y., Hanazawa, R., Uchida, K., Saito, H. and Mizusawa, H・ (200 1 ): Immunohistochemical diagnos.is YamFguchi, H・ (1999): Phylogenetic classification and of Cryptoco?cus neoformans var. gattii infection ln specleS identification of dermatophyte strains based on chronic menlngOenCePhalitis: the first case in Japan. DNA sequences ofnuclear ribosomal intemal transcribed Intem. Med., 40, 124ト1244. spacer i reglOnS. ∫. Clin. Microbio1., 37, 920-924. 5. Fortes, S. T., Lazera, M. S., Nishikawa, M. M., Macedo, R. 3・ Kohno, S., Vama, A., Kwon-Chung, K. ∫. and Hara, K. C・ and Wanke, B. (2001): First isolation of C77PtOCOCCuS (1994): Epidemiology studies of clinical isolates of neoformans var. gattii from a native jungle tree in the C77PtOCOCCuS neOfonnans of Japan by restriction fiagment Brazilian Amazon rain forest. Mycoses, 44, 1 37- 140. 32.
Recommended publications
  • Diversity of the Cryptococcus Neoformans-Cryptococcus Gattii Species Complex Marjan Bovers1, Ferry Hagen1 and Teun Boekhout1,2
    S4 Rev Iberoam Micol 2008; 25: S4-S12 Review Diversity of the Cryptococcus neoformans-Cryptococcus gattii species complex Marjan Bovers1, Ferry Hagen1 and Teun Boekhout1,2 1Yeast Research Group, CBS Fungal Diversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Department of Internal Medicine and Infectious Diseases, University Medical Centre Utrecht, The Netherlands Summary More than 110 years of study of the Cryptococcus neoformans and Cryptococcus gattii species complex has resulted in an enormous accumulation of fundamental, applied biological and clinical knowledge. Recent developments in our understanding of the diversity within the species complex are presented, emphasizing the intraspecific complexity, which includes species, microspecies, hybrids, serotypes and genotypes. Each of these may have different roles in disease. An overview of obsolete and current names is presented. Key words Cryptococcus neoformans, Cryptococcus gattii, Yeast, Taxonomy, Pathogen. Diversidad del complejo de especies Cryptococcus neoformans-Cryptococcus gattii Resumen Más de 110 años de estudio sobre el complejo de especies Cryptococcus neoformans y Cryptococcus gattii han dado lugar a un gran acúmulo de conocimiento básico, aplicado y clínico. En este artículo se describen los avances recientes en la comprensión de su diversidad, haciendo énfasis en la complejidad intraespecífica que presenta y que llega a englobar especies, microespecies, híbridos, serotipos y genotipos. Cada uno de estos grupos puede jugar un papel diferente en la enfermedad. Se presenta también una visión global de los nombres obsoletos y actuales de estos taxones. Palabras clave Cryptococcus neoformans, Cryptococcus gattii, Levaduras, Patógeno, Taxonomía. Introduction racteristics of the genus Saccharomyces were not present, he placed these species in the genus Cryptococcus [166].
    [Show full text]
  • Plant Life Magill’S Encyclopedia of Science
    MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D.
    [Show full text]
  • Zymobiomics Microbial Community DNA Standard II (Log Distribution)
    INSTRUCTION MANUAL ZymoBIOMICS™ Microbial Community DNA Standard II (Log Distribution) Catalog No. D6311 Highlights • Log abundance distribution: assess detection limit of as low as DNA of three microbes. • Accurate composition: cross-validated with multiple types of measurements. • Microbiomics QC: ideal for quality control of microbiome measurements Contents Product Contents ...................................................... 1 Product Specifications .............................................. 1 Product Description .................................................. 2 Strain Information ..................................................... 3 Protocol .................................................................... 4 Bioinformatics Analysis Recommendations ........ 4 Ordering Information ................................................. 5 Appendix A: Additional Strain Information ................. 6 Ordering Information and Related Products ............. 7 For Research Use Only Ver. 1.0.3 ZYMO RESEARCH CORP. Phone: (949) 679-1190 ▪ Toll Free: (888) 882-9682 ▪ Fax: (949) 266-9452 ▪ [email protected] ▪ www.zymoresearch.com Page 1 Satisfaction of all Zymo Product Contents Research products is guaranteed. If you are Storage dissatisfied with this product, Product Name D6311 please call 1-888-882-9682. Temperature ZymoBIOMICS™ Microbial Community Note – Integrity of kit 220ng / 20µl -20°C components is guaranteed DNA Standard II (Log Distribution) for up to one year from date of purchase. Product Specifications Source: genomic
    [Show full text]
  • Evolutionary Affinities of Heterobasidiomycetous Yeasts Estimated from 185 and 255 Ribosomal RNA Sequence Divergence
    6349 System. Appl. Microbiol. 12, 230-236 (1989) Evolutionary Affinities of Heterobasidiomycetous Yeasts Estimated from 185 and 255 Ribosomal RNA Sequence Divergence 2 2 EVELINE GUEHO\ CLETUS P. KURTZMAN , and STEPHEN W. PETERSON J lnstitut Pasteur, Unite de Mycologie, 75724 Paris Cedex 15, France Northern Regional Research Center, U.S. Department of Agriculture, Peoria, IL 61604, USA Received May 20, 1989 Summary Phylogenetic relationships among heterobasidiomycetous yeasts, including anamorphic and teleomorphic taxa, have been compared from the sequence similarity of small (18S) and large (25S) subunit ribosomal RNA. Species examined were Cystofilobasidium capitatum, Filobasidiella neoformans, Fi/obasidium floriforme, Leucosporidium scottii, Malassezia furfur, M. pachydermatis, Phaffia rhodozyma, Rhodos­ poridium toru/oides, Sporidiobolus johnsonii, Sterigmatosporidium polymorphum, Trichosporon beige/ii, T. cutaneum and T. pullulans. The taxa cluster into three main groups. One group contains the non­ teliospore forming genera Sterigmatosporidium, Filobasidiella, Filobasidium and the anamorphic species T. beigeIii and T. cutaneum. The teliospore formers Leucosporidium, Rhodosporidium and Sporidiobo/us, all of which have simple septal pores, cluster into a single group, despite the heterogeneity of carotenoid formation. By contrast, C. capitatum appears separate, not only from Rhodosporidium, but also from the Filobasidiaceae with which it shares a primitive dolipore septum. The uniqueness of the genus Malassezia among yeasts is confirmed,
    [Show full text]
  • Complementation of a Capsule-Deficient Mutation of Cryptococcus Neoformans Restores Its Virulence YUN C
    MOLECULAR AND CELLULAR BIOLOGY, July 1994, p. 4912-4919 Vol. 14, No. 7 0270-7306/94/$04.00+0 Copyright © 1994, American Society for Microbiology Complementation of a Capsule-Deficient Mutation of Cryptococcus neoformans Restores Its Virulence YUN C. CHANG AND K. J. KWON CHUNG* Laboratory of Clinical Investigation, National Institute ofAllergy and Infectious Diseases, National Institutes ofHealth, Bethesda, Maryland 20892 Received 25 January 1994/Returned for modification 4 March 1994/Accepted 12 April 1994 Capsule formation plays a significant role in the pathogenicity of Cryptococcus neoformans. To study the molecular basis of capsule synthesis, the capsule-deficient phenotype of a mutant strain was complemented by transformation. A plasmid rescued from the resulting Cap' transformant complemented a cap59 mutation which was mapped previously by classical recombination analysis. Gene deletion by homologous integration resulted in an acapsular phenotype, indicating that we have identified the CAPS9 gene. The CAP59 gene was assigned to chromosome I by Southern blot analysis of contour-clamped homogeneous electric field gel electrophoresis-resolved chromosomes of C. neoformans var. neoformans. Sequence comparison of genomic and cDNA clones indicated the presence of six introns. CAP59 encoded a 1.9-kb transcript and a deduced protein of 458 amino acids. Analysis of the nucleotide sequence revealed little similarity to existing sequences in the data bank. When the capsule-deficient phenotype was complemented, the originally avirulent C. neoformans strain became virulent for mice. In addition, the acapsular strain created by gene deletion of CAPS9 lost its virulence. This work demonstrates the molecular basis for capsule-related virulence and that the CAP59 gene is required for capsule formation.
    [Show full text]
  • Towards an Integrated Phylogenetic Classification of the Tremellomycetes
    http://www.diva-portal.org This is the published version of a paper published in Studies in mycology. Citation for the original published paper (version of record): Liu, X., Wang, Q., Göker, M., Groenewald, M., Kachalkin, A. et al. (2016) Towards an integrated phylogenetic classification of the Tremellomycetes. Studies in mycology, 81: 85 http://dx.doi.org/10.1016/j.simyco.2015.12.001 Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-1703 available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 81: 85–147. Towards an integrated phylogenetic classification of the Tremellomycetes X.-Z. Liu1,2, Q.-M. Wang1,2, M. Göker3, M. Groenewald2, A.V. Kachalkin4, H.T. Lumbsch5, A.M. Millanes6, M. Wedin7, A.M. Yurkov3, T. Boekhout1,2,8*, and F.-Y. Bai1,2* 1State Key Laboratory for Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China; 2CBS Fungal Biodiversity Centre (CBS-KNAW), Uppsalalaan 8, Utrecht, The Netherlands; 3Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig 38124, Germany; 4Faculty of Soil Science, Lomonosov Moscow State University, Moscow 119991, Russia; 5Science & Education, The Field Museum, 1400 S. Lake Shore Drive, Chicago, IL 60605, USA; 6Departamento de Biología y Geología, Física y Química Inorganica, Universidad Rey Juan Carlos, E-28933 Mostoles, Spain; 7Department of Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-10405 Stockholm, Sweden; 8Shanghai Key Laboratory of Molecular Medical Mycology, Changzheng Hospital, Second Military Medical University, Shanghai, PR China *Correspondence: F.-Y.
    [Show full text]
  • 12 Tremellomycetes and Related Groups
    12 Tremellomycetes and Related Groups 1 1 2 1 MICHAEL WEIß ,ROBERT BAUER ,JOSE´ PAULO SAMPAIO ,FRANZ OBERWINKLER CONTENTS I. Introduction I. Introduction ................................ 00 A. Historical Concepts. ................. 00 Tremellomycetes is a fungal group full of con- B. Modern View . ........................... 00 II. Morphology and Anatomy ................. 00 trasts. It includes jelly fungi with conspicuous A. Basidiocarps . ........................... 00 macroscopic basidiomes, such as some species B. Micromorphology . ................. 00 of Tremella, as well as macroscopically invisible C. Ultrastructure. ........................... 00 inhabitants of other fungal fruiting bodies and III. Life Cycles................................... 00 a plethora of species known so far only as A. Dimorphism . ........................... 00 B. Deviance from Dimorphism . ....... 00 asexual yeasts. Tremellomycetes may be benefi- IV. Ecology ...................................... 00 cial to humans, as exemplified by the produc- A. Mycoparasitism. ................. 00 tion of edible Tremella fruiting bodies whose B. Tremellomycetous Yeasts . ....... 00 production increased in China alone from 100 C. Animal and Human Pathogens . ....... 00 MT in 1998 to more than 250,000 MT in 2007 V. Biotechnological Applications ............. 00 VI. Phylogenetic Relationships ................ 00 (Chang and Wasser 2012), or extremely harm- VII. Taxonomy................................... 00 ful, such as the systemic human pathogen Cryp- A. Taxonomy in Flow
    [Show full text]
  • Cryptococcus Neoformans Variety Neoformans Serotype D (Filobasidiella Neoformans)
    Copyright 2004 by the Genetics Society of America DOI: 10.1534/genetics.103.023408 A Genetic Linkage Map of Cryptococcus neoformans variety neoformans Serotype D (Filobasidiella neoformans) Robert E. Marra,*,†,1 Johnny C. Huang,* Eula Fung,‡ Kirsten Nielsen,* Joseph Heitman,*,§ Rytas Vilgalys*,† and Thomas G. Mitchell* *Department of Molecular Genetics and Microbiology and §Howard Hughes Medical Institute, Duke University Medical Center, Durham, North Carolina 27710, †Department of Biology, Duke University, Durham, North Carolina 27710 and ‡Stanford Genome Technology Center, Palo Alto, California 94304 Manuscript received October 21, 2003 Accepted for publication January 16, 2004 ABSTRACT To construct a genetic linkage map of the heterothallic yeast, Cryptococcus neoformans (Filobasidiella neoformans), we crossed two mating-compatible strains and analyzed 94 progeny for the segregation of 301 polymorphic markers, consisting of 228 restriction site polymorphisms, 63 microsatellites, two indels, and eight mating-type (MAT)-associated markers. All but six markers showed no significant (P Ͻ 0.05) segrega- tion distortion. At a minimum LOD score of 6.0 and a maximum recombination frequency of 0.30, 20 cM. Average marker density is 5.4 cM 1500ف linkage groups were resolved, resulting in a map length of (range 1–28.7 cM). Hybridization of selected markers to blots of electrophoretic karyotypes unambiguously assigned all linkage groups to chromosomes and led us to conclude that the C. neoformans genome is kb/cM 13.2ف Mb, comprising 14 chromosomes ranging in size from 0.8 to 2.3 Mb, with a ratio of 20.2ف averaged across the genome. However, only 2 of 12 ungrouped markers hybridized to chromosome 10.
    [Show full text]
  • Gene Arrangement and Sequence of the 5S Rrna in Filobasidiella Neoformans (Cryptococcus Neoformans) As a Phylogenetic Indicator
    INTERNATIONALJOURNAL OF SYSTEMATIC BACTERIOLOGY, Apr. 1994, p. 209-213 Vol. 44, No. 2 0020-7713/94/$04.00+0 Copyright 0 1994, International Union of Microbiological Societies Gene Arrangement and Sequence of the 5s rRNA in Filobasidiella neoformans (Cryptococcus neoformans) as a Phylogenetic Indicator KYUNG J. KWON-CHUNG" AND YUN C. CHANG Laboratory of Clinical Investigation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892 We cloned the 5s rRNA gene and determined its organization in the four genes encoding rRNAs in a ribosomal DNA repeat unit of Filobasidiella neoformans, the teleomorph of Cryptococcus neoformans. The 5s rRNA gene contained 118 nucleotides and was located 1 kb upstream from the 18s rRNA gene within the 8.6-kb fragment of the ribosomal DNA repeat unit. The sequence of the 5s rRNA gene from F. neufurmans was more similar to the sequence of the 5s rRNA gene from Tremella mesenterica than to the sequences of the 5s rRNA genes from Filobasidium species. The arrangement of the rRNA genes in F. neoformans closely resembles the arrangement of the rRNA genes in mushrooms such as Schizophyllum commune, Agaricus bisporus, and Coprinus cinereus in that the 5s rRNA-coding region not only is located within the repeat unit that encodes the other rRNAs but also is transcribed in the same direction as the other rRNA genes. This is the first description of the arrangement of rRNA genes in a species belonging to the Heterobasidiomycetes. In 1989, the gene cluster encoding rRNAs in a strain of MATERLQLS AND METHODS Cryptococcus neoformans was cloned by Restrepo and Bar- bour, who used a ribosomal DNA (rDNA) clone of Saccharo- DNA extraction.
    [Show full text]
  • Graduate College Studies on Selected Enzymes of the Α
    GRADUATE COLLEGE STUDIES ON SELECTED ENZYMES OF THE α-AMINOADIPATE PATHWAY FOR LYSINE BIOSYNTHESIS IN Saccharomyces cerevisiae A Dissertation SUBMITTED TO THE GRADUATE FACULTY In partial fulfillment of the requirement for the Degree of Doctor of Philosophy By BABAK ANDI Norman, Oklahoma 2005 UMI Number: 3203304 UMI Microform 3203304 Copyright 2006 by ProQuest Information and Learning Company. All rights reserved. This microform edition is protected against unauthorized copying under Title 17, United States Code. ProQuest Information and Learning Company 300 North Zeeb Road P.O. Box 1346 Ann Arbor, MI 48106-1346 © Copyright by BABAK ANDI 2005 All Rights Reserved The Prologue to *Bertrand Russell's Autobiography What I Have Lived For Three passions, simple but overwhelmingly strong, have governed my life: the longing for love, the search for knowledge, and unbearable pity for the suffering of mankind. These passions, like great winds, have blown me hither and thither, in a wayward course, over a great ocean of anguish, reaching to the very verge of despair. I have sought love, first, because it brings ecstasy - ecstasy so great that I would often have sacrificed all the rest of life for a few hours of this joy. I have sought it, next, because it relieves loneliness--that terrible loneliness in which one shivering consciousness looks over the rim of the world into the cold unfathomable lifeless abyss. I have sought it finally, because in the union of love I have seen, in a mystic miniature, the prefiguring vision of the heaven that saints and poets have imagined. This is what I sought, and though it might seem too good for human life, this is what-- at last--I have found.
    [Show full text]
  • View of 3C As a New Biopesticide Ingredient
    Genomic Analysis, Population Quantification and Diversity Characterization of Cryptococcus flavescens DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Xiaoqing Rong, M.S. Graduate Program in Plant Pathology The Ohio State University 2013 Dissertation Committee: Dr. Brian B. McSpadden Gardener, Advisor Dr. Thomas K. Mitchell Dr. Pierce A. Paul Dr. Christopher G. Taylor Copyrighted by Xiaoqing Rong 2013 Abstract Cryptococcus flavescens strain OH182.9_3C (3C) has been shown to have biocontrol efficacy against Fusarium head blight (FHB) of wheat, and, 3C is currently under development as a biopesticide. The research described in this dissertation advanced that commercial development of this agent by providing new information about the biology, genetics, diversity, and ecology of this species for the control of Fusarium Head Blight. Such data may be used by the US EPA and the company developing the strain for the regulatory review of 3C as a new biopesticide ingredient. A draft genome sequence of 3C was obtained through high-throughput sequencing and short read assembly. Ab initio gene prediction and sequence similarity search were conducted to annotate the genome. Nine conserved regions were identified from the assembled genome sequence to develop molecular markers for population quantification and diversity characterization. Putative non-ribosomal peptide synthetase and glucanase genes were also found in the genome and may contribute to the biocontrol activity previously noted for the strain. A quantitative PCR (qPCR) assay was developed to quantify the abundance and population dynamics of 3C-like C. flavescens in wheat production systems.
    [Show full text]
  • The 100 Years of the Fungus Collection Mucl 1894-1994
    THE 100 YEARS OF THE FUNGUS COLLECTION MUCL 1894-1994 Fungal Taxonomy and Tropical Mycology: Quo vadis ? Taxonomy and Nomenclature of the Fungi Grégoire L. Hennebert Catholic University of Louvain, Belgium Notice of the editor This document is now published as an archive It is available on www.Mycotaxon.com It is also produced on CD and in few paperback copies G. L. Hennebert ed. Published by Mycotaxon, Ltd. Ithaca, New York, USA December 2010 ISBN 978-0-930845-18-6 (www pdf version) ISBN 978-0-930845-17-9 (paperback version) DOI 10.5248/2010MUCL.pdf 1894-1994 MUCL Centenary CONTENTS Lists of participants 8 Forword John Webser 13 PLENARY SESSION The 100 Year Fungus Culture Collection MUCL, June 29th, 1994 G.L. Hennebert, UCL Mycothèque de l'Université Catholique de Louvain (MUCL) 17 D. Hawksworth, IMI, U.K. Fungal genetic resource collections and biodiversity. 27 D. van der Mei, CBS, MINE, Netherlands The fungus culture collections in Europe. 34 J. De Brabandere, BCCM, Belgium The Belgian Coordinated Collections of Microorganisms. 40 Fungal Taxonomy and tropical Mycology G.L. Hennebert, UCL Introduction. Fungal taxonomy and tropical mycology: Quo vadis ? 41 C.P. Kurtzman, NRRL, USA Molecular taxonomy in the yeast fungi: present and future. 42 M. Blackwell, Louisiana State University, USA Phylogeny of filamentous fungi deduced from analysis of molecular characters: present and future. 52 J. Rammeloo, National Botanical Garden, Belgium Importance of morphological and anatomical characters in fungal taxonomy. 57 M.F. Roquebert, Natural History Museum, France Possible progress of modern morphological analysis in fungal taxonomy. 63 A.J.
    [Show full text]