A Window on Organic Mineral Evolution
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Mineral Classifications-No Links
CLASSIFYING MINERALS Minerals are divided into nine (9) broad classifications. They are typically classified based on the negatively charged (anionic) portion of their chemical composition. For example, copper oxide (CuO) consists of copper (Cu ++ ) and oxygen (O -- ) ions, and the negatively charged oxygen ion puts it in the “Oxide” classification (which also includes iron oxide, titanium dioxide, etc). The classifications are: Silicate class The largest group of minerals by far, the silicates are mostly composed of silicon and oxygen, combined with ions like aluminum, magnesium, iron, and calcium. Some important rock-forming silicates include the feldspars, quartz, olivines, pyroxenes, garnets, and micas. Carbonate class 2− The carbonate minerals contain the anion (CO 3) . They are deposited in marine settings from accumulated shells of marine life and also in evaporitic areas like the Great Salt Lake and karst regions where they form caves, stalactites and stalagmites. Typical carbonates include calcite and aragonite (both calcium carbonate), dolomite (magnesium/calcium carbonate) and siderite (iron carbonate). The carbonate class also includes the nitrate and borate minerals. Sulfate class 2− Sulfate minerals all contain the sulfate anion, SO 4 . Sulfates commonly form in evaporitic settings where highly saline waters slowly evaporate, in hydrothermal vein systems as gangue minerals and as secondary oxidation products of original sulfide minerals. Common sulfates include anhydrite (calcium sulfate), celestine (strontium sulfate), barite (barium sulfate), and gypsum (hydrated calcium sulfate). The sulfate class also includes the chromate, molybdate, selenate, sulfite, tellurate, and tungstate minerals. Halide class The halide minerals form the natural salts and include fluorite (calcium fluoride), halite (sodium chloride) and sylvite (potassium chloride). -
Stabilization and Destabilization of Soil Organic Matter: Mechanisms and Controls
13F7H GEODERLIA ELSEVIER Geoderma 74 (1996) 65-105 • Stabilization and destabilization of soil organic matter: mechanisms and controls Phillip Sollins, Peter Homann, Bruce A. Caldwell Department of Forest Science Oregon State University Corvallis, OR 97331, USA Receed 1 December 1993; revised 26 July 1995; accepted 3 April 1996 Abstract We present a conceptual model of the processes by which plant leaf and root litter is transformed to soil organic C and CO 2. Stabilization of a portion of the litter C yields material that resists further transformation; destabilization yields material that is more susceptible to microbial respiration. Stability of the organic C is viewed as resulting from three general sets of characteristics. Recalcitrance comprises, molecular-level characteristics of organic substances, including elemental composition, presence of functional groups, and molecular conformation, that influence their degradation by microbes and enzymes. Interactions refers to the inter-molecular interactions between organics and either inorganic substances or other organic substances that alter the rate of degradation of those organics or synthesis of new organics. Accessibility refers to the location of organic substances with respect to microbes and enzymes. Mechanisms by which these three characteristics change through time are reviewed along with controls on those mechanisms. This review suggests that the following changes in the study of soil organic matter dynamics would speed progress: (1) increased effort to incorporate results -
Role of Mineral Surfaces in Prebiotic Chemical Evolution. in Silico Quantum Mechanical Studies
life Review Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies Albert Rimola 1,*, Mariona Sodupe 1 and Piero Ugliengo 2,* 1 Departament de Química, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain; [email protected] 2 Dipartimento di Chimica and Nanostructured Interfaces and Surfaces (NIS), Università degli Studi di Torino, Via P. Giuria 7, 10125 Torino, Italy * Correspondence: [email protected] (A.R.); [email protected] (P.U.); Tel.: +39-011-670-4596 (P.U.) Received: 1 December 2018; Accepted: 12 January 2019; Published: 17 January 2019 Abstract: There is a consensus that the interaction of organic molecules with the surfaces of naturally-occurring minerals might have played a crucial role in chemical evolution and complexification in a prebiotic era. The hurdle of an overly diluted primordial soup occurring in the free ocean may have been overcome by the adsorption and concentration of relevant molecules on the surface of abundant minerals at the sea shore. Specific organic–mineral interactions could, at the same time, organize adsorbed molecules in well-defined orientations and activate them toward chemical reactions, bringing to an increase in chemical complexity. As experimental approaches cannot easily provide details at atomic resolution, the role of in silico computer simulations may fill that gap by providing structures and reactive energy profiles at the organic–mineral interface regions. Accordingly, numerous computational studies devoted to prebiotic chemical evolution induced by organic–mineral interactions have been proposed. The present article aims at reviewing recent in silico works, mainly focusing on prebiotic processes occurring on the mineral surfaces of clays, iron sulfides, titanium dioxide, and silica and silicates simulated through quantum mechanical methods based on the density functional theory (DFT). -
Mineralogy and Origin of Coarse-Grained Segregations in the Pyrometallurgical Zn-Pb Slags from Katowice-Wełnowiec (Poland)
Miner Petrol DOI 10.1007/s00710-016-0439-1 ORIGINAL PAPER Mineralogy and origin of coarse-grained segregations in the pyrometallurgical Zn-Pb slags from Katowice-Wełnowiec (Poland) R. Warchulski1 & A. Gawęda 1 & J. Janeczek1 & M. Kądziołka-Gaweł2 Received: 20 December 2015 /Accepted: 9 March 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract The unique among pyrometallurgical slags, coarse- Introduction grained (up to 2.5 cm) segregations (up to 40 cm long) rimmed by Baplitic^ border zones occur within holocrystalline histor- Pyrometallurgical slags from base-metal smelting have recent- ical Zn-smelting slag in Katowice, S Poland. Slag surrounding ly been studied extensively mainly with the purpose of the segregations consists of olivine, spinel series, melilite, assessing their environmental impact for many of them con- clinopyroxene, leucite, nepheline and sulphides. Ca-oliv- tain elevated concentrations of potentially toxic metals, in- ines, kalsilite and mica compositionally similar to cluding As, Cd, Cu, Pb and Zn (e.g. Ettler et al. 2001; oxykinoshitalite occur in border zones in addition to Puziewicz et al. 2007; Álvarez-Valero et al. 2009,Piatakand olivine, spinel series and melilite. Miarolitic and mas- Seal 2010; Vítková et al. 2010;Kierczaketal.2010;Ettlerand sive pegmatite-like segregations are built of subhedral Johan 2014). Those metals may be partitioned among phases crystals of melilite, leucite, spinel series, clinopyroxene with different leaching potential during weathering. and hematite. Melilite, clinopyroxenes and spinels in the Therefore, the detailed knowledge of phase composition of segregationsareenrichedinZnrelativelytooriginal slags is prerequisite for understanding their leaching behav- slag and to fine-grained border zones. -
Tracking Hidden Organic Carbon in Rocks Using Chemometrics And
www.nature.com/scientificreports OPEN Tracking hidden organic carbon in rocks using chemometrics and hyperspectral imaging Received: 4 October 2017 Céline Pisapia 1,2, Frédéric Jamme2, Ludovic Duponchel3 & Bénédicte Ménez1 Accepted: 25 January 2018 Finding traces of life or organic components of prebiotic interest in the rock record is an appealing goal Published: xx xx xxxx for numerous felds in Earth and space sciences. However, this is often hampered by the scarceness and highly heterogeneous distribution of organic compounds within rocks. We assess here an innovative analytical strategy combining Synchrotron radiation-based Fourier-Transform Infrared microspectroscopy (S-FTIR) and multivariate analysis techniques to track and characterize organic compounds at the pore level in complex oceanic rocks. S-FTIR hyperspectral images are analysed individually or as multiple image combinations (multiset analysis) using Principal Component Analyses (PCA) and Multivariate Curve Resolution – Alternating Least Squares (MCR-ALS). This approach allows extracting simultaneously pure organic and mineral spectral signatures and determining their spatial distributions and relationships. MCR-ALS analysis provides resolved S-FTIR signatures of 8 pure mineral and organic components showing the close association at a micrometric scale of organic compounds and secondary clays formed during rock alteration and known to catalyse organic synthesis. These results highlights the potential of the serpentinizing oceanic lithosphere to generate and preserve organic compounds of abiotic origin, in favour of the hydrothermal theory for the origin of life. Spectroscopic techniques and especially Synchrotron-based Fourier-Transform Infrared microspectroscopy (S-FTIR) have been used in geosciences for decades1–3. S-FTIR has notably been proven efcient for determining at the micrometer scale the mineral, fuid and organic phases contained in interplanetary dust particles, meteor- ites and terrestrial material4–10. -
Carbon Mineral Ecology: Predicting the Undiscovered Minerals of Carbon
American Mineralogist, Volume 101, pages 889–906, 2016 Carbon mineral ecology: Predicting the undiscovered minerals of carbon ROBERT M. HAZEN1,*, DANIEL R. HUMMER1, GRETHE HYSTAD2, ROBERT T. DOWNS3, AND JOSHUA J. GOLDEN3 1Geophysical Laboratory, Carnegie Institution, 5251 Broad Branch Road NW, Washington, D.C. 20015, U.S.A. 2Department of Mathematics, Computer Science, and Statistics, Purdue University Calumet, Hammond, Indiana 46323, U.S.A. 3Department of Geosciences, University of Arizona, 1040 East 4th Street, Tucson, Arizona 85721-0077, U.S.A. ABSTRACT Studies in mineral ecology exploit mineralogical databases to document diversity-distribution rela- tionships of minerals—relationships that are integral to characterizing “Earth-like” planets. As carbon is the most crucial element to life on Earth, as well as one of the defining constituents of a planet’s near-surface mineralogy, we focus here on the diversity and distribution of carbon-bearing minerals. We applied a Large Number of Rare Events (LNRE) model to the 403 known minerals of carbon, using 82 922 mineral species/locality data tabulated in http://mindat.org (as of 1 January 2015). We find that all carbon-bearing minerals, as well as subsets containing C with O, H, Ca, or Na, conform to LNRE distributions. Our model predicts that at least 548 C minerals exist on Earth today, indicating that at least 145 carbon-bearing mineral species have yet to be discovered. Furthermore, by analyzing subsets of the most common additional elements in carbon-bearing minerals (i.e., 378 C + O species; 282 C + H species; 133 C + Ca species; and 100 C + Na species), we predict that approximately 129 of these missing carbon minerals contain oxygen, 118 contain hydrogen, 52 contain calcium, and more than 60 contain sodium. -
7 30(1) 0007 Włodarczyk-Makuła
CIVIL AND ENVIRONMENTAL ENGINEERING REPORTS E-ISSN 2450-8594 CEER 2020; 30 (1): 074-086 DOI: 10.2478/ceer-2020-0007 Original Research Article CHARACTERISTICS OF PETROLEUM COMPOUNDS AND THEIR REMOVAL FROM THE AQUATIC ENVIRONMENT Maria WŁODARCZYK – MAKUŁA 1 Czestochowa University of Technology, Department of Environmental Engineering Czestochowa, Poland A b s t r a c t The aim of the study was to characterize the components of crude oil, with particular emphasis on those that have a toxic effect on organisms, and to describe the sources of pollution and the methodology for determining these compounds in aqueous solutions. In addition, the study presents the legal provisions in the field of petroleum compounds and practical methods for their removal in the event of uncontrolled emission of these compounds into the aquatic environment as well as methods used in the treatment of wastewater loaded with these compounds. Keywords: water, wastewater, surface water, soil petroleum compounds, BTX, PAH 1. INTRODUCTION Crude oil, both unprocessed and its products, pose a serious threat in the event of uncontrolled emissions to the aquatic and ground environment. This threat results from the possibility of migration of these compounds, relative stability and bioaccumulation in organisms inhabiting the aquatic or ground environment [1,2]. The crude oil includes paraffin (alkanes), naphthenic (cycloalkanes) and aromatic hydrocarbons, including polycyclic. The crude oil also contains elements such as sulphur, oxygen, nitrogen, iron, silicon, vanadium, sodium and 1 Corresponding author : Czestochowa University of Technology, 42 – 200 Czestochowa, 69 Dabrowskiego Str., +48 3250919, email: [email protected] CHARACTERISTICS OF PETROLRUM COMPOUNDS AND THEIR REMOVAL 75 FROM THE AQUATIC ENVIRONMENT nickel as well as organometallic and mineral compounds [2]. -
Nanostructural Origin of Blue Fluorescence in the Mineral Karpatite
Potticary, J. , Jensen, T. T., & Hall, S. R. (2017). Nanostructural origin of blue fluorescence in the mineral karpatite. Scientific Reports, 7(1), [9867]. https://doi.org/10.1038/s41598-017-10261-w Publisher's PDF, also known as Version of record License (if available): CC BY Link to published version (if available): 10.1038/s41598-017-10261-w Link to publication record in Explore Bristol Research PDF-document This is the final published version of the article (version of record). It first appeared online via Nature at https://www.nature.com/articles/s41598-017-10261-w. Please refer to any applicable terms of use of the publisher. University of Bristol - Explore Bristol Research General rights This document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: http://www.bristol.ac.uk/red/research-policy/pure/user-guides/ebr-terms/ www.nature.com/scientificreports OPEN Nanostructural origin of blue fuorescence in the mineral karpatite Received: 9 June 2017 Jason Potticary 1,2, Torsten T. Jensen 1,3 & Simon R. Hall1 Accepted: 7 August 2017 The colour of crystals is a function of their atomic structure. In the case of organic crystals, it is the Published: xx xx xxxx spatial relationships between molecules that determine the colour, so the same molecules in the same arrangement should produce crystals of the same colour, regardless of whether they arise geologically or synthetically. There is a naturally-occurring organic crystal known as karpatite which is prized for its beautiful blue fuorescence under ultra-violet illumination. -
Deep Carbon Through Deep Time Data-Driven Insights Robert M
20 Deep Carbon through Deep Time Data-Driven Insights robert m. hazen, yana bromberg, robert t. downs, ahmed eleish, paul g. falkowski, peter fox, donato giovannelli, daniel r. hummer, grethe hystad, joshua j. golden, andrew h. knoll, congrui li, chao liu, eli k. moore, shaunna m. morrison, a.d. muscente, anirudh prabhu, jolyon ralph, michelle y. rucker, simone e. runyon, lisa a. warden, and hao zhong 20.1 Introduction: Data and the Deep Carbon Observatory For most of the history of science, data-driven discovery has been difficult and time- consuming: a lifetime of meticulous data collection and thoughtful synthesis was required to recognize previously hidden, higher-dimensional trends in multivariate data. Recognition of processes such as biological evolution by natural selection (1,2), continental evolution by plate tectonics (3,4), atmospheric and ocean oxygenation by photosynthesis (5,6), and climate change (7,8) required decades of integrated data synthesis preceding the discovery and acceptance of critical Earth phenomena. How- ever, we stand at the precipice of a unique opportunity: to dramatically accelerate scientific discovery by coupling hard-won data resources with advanced analytical and visualization techniques (9,10). Today, Earth and life sciences are generating a multi- tude of data resources in numerous subdisciplines. Integration and synthesis of these diverse data resources will lead to an abductive, data-driven approach to investigating Earth’s mineralogical and geochemical history, as well as the coevolution of the geosphere and biosphere (11–13). In this chapter, we examine applications of data science in deep carbon research through three “use cases.” The first example focuses on geochemical and mineralogical anomalies from a period in Earth history (~1.3 to 0.9 Ga) when the supercontinent Rodinia was being assembled from previously scattered continental blocks. -
Summer 1989 Gems & Gemology
VOLUME XXV SUMMER 1989 I The quarterly journal of the Gemological Institute of America SUMMER 1989 Volume 25 No. 2 TABLE OF CONTENTS EDITORIAL 67 New Challenges for the Diamond Industry Richard T Liddicoat FEATURE 68 The Characteristics and Identification ARTICLES of Filled Diamonds John I. Koivula, Robert C. Kam~nerling, Emmanuel Fritsch, C. W Fryer, David Hargett, and Robert E. Kane NOTES , , , 84 A Preliminary Gemological Study of AND NEW Synthetic Diamond Thin Films TECHNIQUES Emmanuel Fritsch, Laurie Conner, and John I. Koivula Grading the Hope Diamond Robert Crowningshield Contribution to the Identification of Treated Colored Diamonds: Diamonds with Peculiar Color-Zoned Pavilions Emmanuel Fritsch and lames E. Shigley REGULAR 102 Gem Trade Lab Notes FEATURES 109 Editorial Forum 110 Gem News 119 Book Reviews 120 Gemological Abstracts ABOUT THE COVER: Fine diamonds in fine jewelry -like this superb necklace and matching earclips -represent the heart of the jewelry industry. Because of the premier importance of diamonds, however, the rewards of making a diamond "better" are potentially very great. Although historically there have been numerous diamond substitutes, modern technology has led to new industries devoted to the treatment of natural diamonds. Three of the articles in this issue deal with some of the most important-or potentially important-diamond treatments. The fourth deals with one of the world's most notorious untreated diamonds: the Hope. The necklace (97.75 ct total weight) and earclips (24.63 ct total weight) are courtesy of Van Cleef ed Arpels. Photo @ Harold e'J Erica Van Pelt - Photographers, Los Angeles, CA. Typesetting for Gems & Gemology is by Scientific Composition, Los Angeles, CA. -
Constraining Crustal Silica on Ancient Earth
Constraining crustal silica on ancient Earth C. Brenhin Kellera,1 and T. Mark Harrisonb,1 aDepartment of Earth Sciences, Dartmouth College, Hanover, NH 03755; and bDepartment of Earth, Planetary, and Space Sciences, University of California, Los Angeles, CA 90095 Contributed by T. Mark Harrison, July 21, 2020 (sent for review May 15, 2020; reviewed by Francis Albarede` and Jun Korenaga) Accurately quantifying the composition of continental crust on make our planet habitable: erosion by the wind, rain, and ice of Hadean and Archean Earth is critical to our understanding of the an active hydrosphere; the slow return of ancient felsic crust to physiography, tectonics, and climate of our planet at the dawn the mantle by sediment subduction and subduction–erosion; and of life. One longstanding paradigm involves the growth of a rel- the assimilation and metamorphism accompanying the birth of atively mafic planetary crust over the first 1 to 2 billion years new crust from mantle-derived magma (e.g., ref. 22). In compar- of Earth history, implying a lack of modern plate tectonics and ison to currently quiescent worlds like Mars (23) or our Moon a paucity of subaerial crust, and consequently lacking an effi- (24), most of Earth’s crust is geologically young (25). While cient mechanism to regulate climate. Others have proposed a this first-order challenge is well known, recent estimates of the more uniformitarian view in which Archean and Hadean conti- composition of Earth’s Archean crust have nonetheless reached nents were only slightly more mafic than at present. Apart from widely divergent results, from mafic (15–18) to felsic (26–28). -
List of Spectra /Compound Names
IS NIR Spectra Complete collection (6049 spectra) This collection includes all NIR spectra collected within this project. Those are organic and inorganic chemicals, pharmaceutical excipients, drugs, polymers, additives, coatings, dyes, pigments, toxic substances, hazardous substances like explosives, agrochemicals and other types of materials. This collection should be chosen by customers with broad range of analytical applications. The near infrared spectral library „IS NIR Spectra“ is a unique collection of 6049 NIR (near infrared) digital spectra. The spectra have been collected in range 4200-10000 cm-1 (=2.4 – 1 micrometers). „IS NIR Spectra“ is the biggest and newest NIR library available on the market. This spectral library has been designed for users who use their NIR spectrometer not only for quantitative and chemometric analysis, but also want to identify unknown samples or just want to use the library as reference spectra database. ra t IS means “Intergrating Sphere” and at the same time “Identify Samplec”. e Technical parameters: p The „IS NIR Spectra“ were collected using the FT-NIR Spectrometer equipped with Integrating Sphere Accessory. Resolution: standard 4cm-1 IR Customized resolution: upon special request the speNctra can be delivered in customized resolution to reach better correspondence with spectr a collected by customer NIR instrument Spectral range in wavenumbers units: 4200-1000I0S cm-1 Spectral range in wavelength units: 2.4 – 1 micr ometers Only one spectrum/compound covering the mentioned spectral range Typical text information about the sample inmcludes (when available): Compound name including synonyms o CAS number .c Chemical formula a Molecular weight tr Additional information about thec sample like manufacturer and comments.