Minerals 2014, 4, 519-540; doi:10.3390/min4020519 OPEN ACCESS minerals ISSN 2075-163X www.mdpi.com/journal/minerals Review Interaction of Natural Organic Matter with Layered Minerals: Recent Developments in Computational Methods at the Nanoscale Jeffery A. Greathouse 1,*, Karen L. Johnson 2 and H. Christopher Greenwell 3 1 Geochemistry Department, Sandia National Laboratories, P.O. Box 0754, Albuquerque, NM 87185-0754, USA 2 School of Engineering and Computing Sciences, Durham University, South Road, Durham DH1 3LE, UK; E-Mail:
[email protected] 3 Department of Earth Sciences, Durham University, South Road, Durham DH1 3LE, UK; E-Mail:
[email protected] * Author to whom correspondence should be addressed; E-Mail:
[email protected]; Tel.: +1-505-284-4895; Fax: +1-505-844-7354. Received: 5 March 2014; in revised form: 3 May 2014 / Accepted: 14 May 2014 / Published: 6 June 2014 Abstract: The role of mineral surfaces in the adsorption, transport, formation, and degradation of natural organic matter (NOM) in the biosphere remains an active research area owing to the difficulties in identifying proper working models of both NOM and mineral phases present in the environment. The variety of aqueous chemistries encountered in the subsurface (e.g., oxic vs. anoxic, variable pH) further complicate this field of study. Recently, the advent of nanoscale probes such as X-ray adsorption spectroscopy and surface vibrational spectroscopy applied to study such complicated interfacial systems have enabled new insight into NOM-mineral interfaces. Additionally, due to increasing capabilities in computational chemistry, it is now possible to simulate molecular processes of NOM at multiple scales, from quantum methods for electron transfer to classical methods for folding and adsorption of macroparticles.