Rhodium(II)-Catalyzed 1,3-Dipolar Cycloaddition Reactions
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Synthesis of Indole and Oxindole Derivatives Incorporating Pyrrolidino, Pyrrolo Or Imidazolo Moieties
From DEPARTMENT OF BIOSCIENCES AT NOVUM Karolinska Institutet, Stockholm, Sweden SYNTHESIS OF INDOLE AND OXINDOLE DERIVATIVES INCORPORATING PYRROLIDINO, PYRROLO OR IMIDAZOLO MOIETIES Stanley Rehn Stockholm 2004 All previously published papers have been reproduced with permission from the publishers. Published and printed by Karolinska University Press Box 200, SE-171 77 Stockholm, Sweden © Stanley Rehn, 2004 ISBN 91-7140-169-5 Till Amanda Abstract The focus of this thesis is on the synthesis of oxindole- and indole-derivatives incorporating pyrrolidins, pyrroles or imidazoles moieties. Pyrrolidino-2-spiro-3’-oxindole derivatives have been prepared in high yielding three-component reactions between isatin, α-amino acid derivatives, and suitable dipolarophiles. Condensation between isatin and an α-amino acid yielded a cyclic intermediate, an oxazolidinone, which decarboxylate to give a 1,3-dipolar species, an azomethine ylide, which have been reacted with several dipolarophiles such as N- benzylmaleimide and methyl acrylate. Both N-substituted and N-unsubstituted α- amino acids have been used as the amine component. 3-Methyleneoxindole acetic acid ethyl ester was reacted with p- toluenesulfonylmethyl isocyanide (TosMIC) under basic conditions which gave (in a high yield) a colourless product. Two possible structures could be deduced from the analytical data, a pyrroloquinolone and an isomeric ß-carboline. To clarify which one of the alternatives that was actually formed from the TosMIC reaction both the ß- carboline and the pyrroloquinolone were synthesised. The ß-carboline was obtained when 3-ethoxycarbonylmethyl-1H-indole-2-carboxylic acid ethyl ester was treated with a tosylimine. An alternative synthesis of the pyrroloquinolone was performed via a reduction of a 2,3,4-trisubstituted pyrrole obtained in turn by treatment of a vinyl sulfone with ethyl isocyanoacetate under basic conditions. -
Organic Chemistry
Wisebridge Learning Systems Organic Chemistry Reaction Mechanisms Pocket-Book WLS www.wisebridgelearning.com © 2006 J S Wetzel LEARNING STRATEGIES CONTENTS ● The key to building intuition is to develop the habit ALKANES of asking how each particular mechanism reflects Thermal Cracking - Pyrolysis . 1 general principles. Look for the concepts behind Combustion . 1 the chemistry to make organic chemistry more co- Free Radical Halogenation. 2 herent and rewarding. ALKENES Electrophilic Addition of HX to Alkenes . 3 ● Acid Catalyzed Hydration of Alkenes . 4 Exothermic reactions tend to follow pathways Electrophilic Addition of Halogens to Alkenes . 5 where like charges can separate or where un- Halohydrin Formation . 6 like charges can come together. When reading Free Radical Addition of HX to Alkenes . 7 organic chemistry mechanisms, keep the elec- Catalytic Hydrogenation of Alkenes. 8 tronegativities of the elements and their valence Oxidation of Alkenes to Vicinal Diols. 9 electron configurations always in your mind. Try Oxidative Cleavage of Alkenes . 10 to nterpret electron movement in terms of energy Ozonolysis of Alkenes . 10 Allylic Halogenation . 11 to make the reactions easier to understand and Oxymercuration-Demercuration . 13 remember. Hydroboration of Alkenes . 14 ALKYNES ● For MCAT preparation, pay special attention to Electrophilic Addition of HX to Alkynes . 15 Hydration of Alkynes. 15 reactions where the product hinges on regio- Free Radical Addition of HX to Alkynes . 16 and stereo-selectivity and reactions involving Electrophilic Halogenation of Alkynes. 16 resonant intermediates, which are special favor- Hydroboration of Alkynes . 17 ites of the test-writers. Catalytic Hydrogenation of Alkynes. 17 Reduction of Alkynes with Alkali Metal/Ammonia . 18 Formation and Use of Acetylide Anion Nucleophiles . -
Visible Light Photoredox Catalysis with Transition Metal Complexes: Application in Organic Synthesis
Visible Light Photoredox Catalysis with Transition Metal Complexes: Application in Organic Synthesis Penghao Chen Dong Group Seminar April, 10th, 2013 Introduction Kalyanasundaram, K. Coord. Chem. Rev. 1982, 46, 159 Introduction Stern‐Volmer Relationship Turro, N. J. Modern Molecular Photochemistry; Benjamin/Cummings: Menlo Park, CA, 1978. Stoichiometric Net Reductive Reactionreductant1. Reduction is required of Electron Poor Olefin O Bn NH2 2 Pac, C. et. al., J. Am. Chem. Soc. 1981, 103, 6495 Net Reductive Reaction 2. Reductive Dehalogenation Fukuzumi, S. et. al., J. Phys. Chem. 1990, 94, 722. Net Reductive Reaction 2. Reductive Dehalogenation Stephenson, C. R. J. et. al., J. Am. Chem. Soc. 2009, 131, 8756. Stephenson, C. R. J. et. al., Nature Chem. 2012, 4, 854 Net Reductive Reaction 3. Radical Cyclization Stephenson, C. R. J. et. al., Chem. Commun. 2010, 46, 4985 Stephenson, C. R. J. et. al., Nature Chem. 2012, 4, 854 Net Reductive Reaction 4. Epoxide and Aziridine Opening Fensterbank, L. et. al., Angew. Chem., Int. Ed. 2011, 50, 4463 Hasegawa, E. et. al., Tetrahedron 2006, 62, 6581 Guindon, Y. et. al., Synlett 1998, 213 Guindon, Y. et. al., Synlett 1995, 449 Net Oxidative Reaction 1. Functional Group Reactions Cano‐Yelo, H.; Deronzier, A. Tetrahedron Lett. 1984, 25, 5517 Net Oxidative Reaction 1. Functional Group Reactions Jiao, N. et. al., Org. Lett. 2011, 13, 2168 Net Oxidative Reaction 1. Functional Group Reactions Jørgensen, K. A.; Xiao, W.‐J. Angew. Chem., Int. Ed. 2012, 51, 784 Net Oxidative Reaction 2. Oxid. Generation of Iminium Ions Stephenson, C. R. J. et. al., J. Am. Chem. Soc. 2010, 132, 1464 Net Oxidative Reaction 2. -
Solvent Effects on Structure and Reaction Mechanism: a Theoretical Study of [2 + 2] Polar Cycloaddition Between Ketene and Imine
J. Phys. Chem. B 1998, 102, 7877-7881 7877 Solvent Effects on Structure and Reaction Mechanism: A Theoretical Study of [2 + 2] Polar Cycloaddition between Ketene and Imine Thanh N. Truong Henry Eyring Center for Theoretical Chemistry, Department of Chemistry, UniVersity of Utah, Salt Lake City, Utah 84112 ReceiVed: March 25, 1998; In Final Form: July 17, 1998 The effects of aqueous solvent on structures and mechanism of the [2 + 2] cycloaddition between ketene and imine were investigated by using correlated MP2 and MP4 levels of ab initio molecular orbital theory in conjunction with the dielectric continuum Generalized Conductor-like Screening Model (GCOSMO) for solvation. We found that reactions in the gas phase and in aqueous solution have very different topology on the free energy surfaces but have similar characteristic motion along the reaction coordinate. First, it involves formation of a planar trans-conformation zwitterionic complex, then a rotation of the two moieties to form the cycloaddition product. Aqueous solvent significantly stabilizes the zwitterionic complex, consequently changing the topology of the free energy surface from a gas-phase single barrier (one-step) process to a double barrier (two-step) one with a stable intermediate. Electrostatic solvent-solute interaction was found to be the dominant factor in lowering the activation energy by 4.5 kcal/mol. The present calculated results are consistent with previous experimental data. Introduction Lim and Jorgensen have also carried out free energy perturbation (FEP) theory simulations with accurate force field that includes + [2 2] cycloaddition reactions are useful synthetic routes to solute polarization effects and found even much larger solvent - formation of four-membered rings. -
Priya Mathew
PROGRESS TOWARDS THE TOTAL SYNTHESIS OF MITOMYCIN C By Priya Ann Mathew Dissertation Submitted to the Faculty of the Graduate School of Vanderbilt University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in Chemistry August, 2012 Nashville, Tennessee Approved: Professor Jeffrey N. Johnston Professor Brian O. Bachmann Professor Ned A. Porter Professor Carmelo J. Rizzo ACKNOWLEDGMENTS I would like to express my gratitude to everyone who made my graduate career a success. Firstly, I would like to thank my advisor, Professor Jeffrey Johnston, for his dedication to his students. He has always held us to the highest standards and he does everything he can to ensure our success. During the challenges we faced in this project, he has exemplified the true spirit of research, and I am especially grateful to him for having faith in my abilities even when I did not. I would like to acknowledge all the past and present members of the Johnston group for their intellectual discussion and their companionship. In particular, I would like to thank Aroop Chandra and Julie Pigza for their incredible support and guidance during my first few months in graduate school, Jayasree Srinivasan who worked on mitomycin C before me, and Anand Singh whose single comment “A bromine is as good as a carbon!” triggered the investigations detailed in section 2.6. I would also like to thank the other members of the group for their camaraderie, including Jessica Shackleford and Amanda Doody for their friendship, Hubert Muchalski for everything related to vacuum pumps and computers, Michael Danneman and Ken Schwieter for always making me laugh, and Matt Leighty and Ki Bum Hong for their useful feedback. -
The Arene–Alkene Photocycloaddition
The arene–alkene photocycloaddition Ursula Streit and Christian G. Bochet* Review Open Access Address: Beilstein J. Org. Chem. 2011, 7, 525–542. Department of Chemistry, University of Fribourg, Chemin du Musée 9, doi:10.3762/bjoc.7.61 CH-1700 Fribourg, Switzerland Received: 07 January 2011 Email: Accepted: 23 March 2011 Ursula Streit - [email protected]; Christian G. Bochet* - Published: 28 April 2011 [email protected] This article is part of the Thematic Series "Photocycloadditions and * Corresponding author photorearrangements". Keywords: Guest Editor: A. G. Griesbeck benzene derivatives; cycloadditions; Diels–Alder; photochemistry © 2011 Streit and Bochet; licensee Beilstein-Institut. License and terms: see end of document. Abstract In the presence of an alkene, three different modes of photocycloaddition with benzene derivatives can occur; the [2 + 2] or ortho, the [3 + 2] or meta, and the [4 + 2] or para photocycloaddition. This short review aims to demonstrate the synthetic power of these photocycloadditions. Introduction Photocycloadditions occur in a variety of modes [1]. The best In the presence of an alkene, three different modes of photo- known representatives are undoubtedly the [2 + 2] photocyclo- cycloaddition with benzene derivatives can occur, viz. the addition, forming either cyclobutanes or four-membered hetero- [2 + 2] or ortho, the [3 + 2] or meta, and the [4 + 2] or para cycles (as in the Paternò–Büchi reaction), whilst excited-state photocycloaddition (Scheme 2). The descriptors ortho, meta [4 + 4] cycloadditions can also occur to afford cyclooctadiene and para only indicate the connectivity to the aromatic ring, and compounds. On the other hand, the well-known thermal [4 + 2] do not have any implication with regard to the reaction mecha- cycloaddition (Diels–Alder reaction) is only very rarely nism. -
Predictive Models for Kinetic Parameters of Cycloaddition
Predictive Models for Kinetic Parameters of Cycloaddition Reactions Marta Glavatskikh, Timur Madzhidov, Dragos Horvath, Ramil Nugmanov, Timur Gimadiev, Daria Malakhova, Gilles Marcou, Alexandre Varnek To cite this version: Marta Glavatskikh, Timur Madzhidov, Dragos Horvath, Ramil Nugmanov, Timur Gimadiev, et al.. Predictive Models for Kinetic Parameters of Cycloaddition Reactions. Molecular Informatics, Wiley- VCH, 2018, 38 (1-2), pp.1800077. 10.1002/minf.201800077. hal-02346844 HAL Id: hal-02346844 https://hal.archives-ouvertes.fr/hal-02346844 Submitted on 5 Feb 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 0DQXVFULSW &OLFNKHUHWRGRZQORDG0DQXVFULSW&$UHYLVLRQGRF[ Predictive models for kinetic parameters of cycloaddition reactions Marta Glavatskikh[a,b], Timur Madzhidov[b], Dragos Horvath[a], Ramil Nugmanov[b], Timur Gimadiev[a,b], Daria Malakhova[b], Gilles Marcou[a] and Alexandre Varnek*[a] [a] Laboratoire de Chémoinformatique, UMR 7140 CNRS, Université de Strasbourg, 1, rue Blaise Pascal, 67000 Strasbourg, France; [b] Laboratory of Chemoinformatics and Molecular Modeling, Butlerov Institute of Chemistry, Kazan Federal University, Kremlyovskaya str. 18, Kazan, Russia Abstract This paper reports SVR (Support Vector Regression) and GTM (Generative Topographic Mapping) modeling of three kinetic properties of cycloaddition reactions: rate constant (logk), activation energy (Ea) and pre-exponential factor (logA). -
Aromatic Substitution Reactions: an Overview
Review Article Published: 03 Feb, 2020 SF Journal of Pharmaceutical and Analytical Chemistry Aromatic Substitution Reactions: An Overview Kapoor Y1 and Kumar K1,2* 1School of Pharmaceutical Sciences, Apeejay Stya University, Sohna-Palwal Road, Sohna, Gurgaon, Haryana, India 2School of Pharmacy and Technology Management, SVKM’s NMIMS University, Hyderabad, Telangana, India Abstract The introduction or replacement of substituent’s on aromatic rings by substitution reactions is one of the most fundamental transformations in organic chemistry. On the basis of the reaction mechanism, these substitution reactions can be divided into electrophilic, nucleophilic, radical, and transition metal catalyzed. This article also focuses on electrophilic and nucleophilic substitution mechanisms. Introduction The replacement of an atom, generally hydrogen, or a group attached to the carbon from the benzene ring by another group is known as aromatic substitution. The regioselectivity of these reactions depends upon the nature of the existing substituent and can be ortho, Meta or Para selective. Electrophilic Aromatic Substitution (EAS) reactions are important for synthetic purposes and are also among the most thoroughly studied classes of organic reactions from a mechanistic point of view. A wide variety of electrophiles can effect aromatic substitution. Usually, it is a substitution of some other group for hydrogen that is of interest, but this is not always the case. For example, both silicon and mercury substituent’s can be replaced by electrophiles. The reactivity of a particular electrophile determines which aromatic compounds can be successfully substituted. Despite the wide range of electrophilic species and aromatic ring systems that can undergo substitution, a single broad mechanistic picture encompasses most EAS reactions. -
Dppm-Derived Phosphonium Salts and Ylides As Ligand Precursors for S-Block Organometallics
Issue in Honor of Prof. Rainer Beckert ARKIVOC 2012 (iii) 210-225 Dppm-derived phosphonium salts and ylides as ligand precursors for s-block organometallics Jens Langer,* Sascha Meyer, Feyza Dündar, Björn Schowtka, Helmar Görls, and Matthias Westerhausen Institute of Inorganic and Analytical Chemistry, Friedrich-Schiller-University Jena Humboldtstraße 8, D-07743 Jena, Germany E-mail: [email protected] Dedicated to Professor Rainer Beckert on the Occasion of his 60th Birthday DOI: http://dx.doi.org/10.3998/ark.5550190.0013.316 Abstract The addition reaction of 1,1-bis(diphenylphosphino)methane (dppm) and haloalkanes R-X yields the corresponding phosphonium salts [Ph2PCH2PPh2R]X (1a: R = Me, X = I; 1b: R = Et, X = Br; 1c: R = iPr, X = I; 1d: R = CH2Mes, X = Br; 1e: R = tBu, X = Br). In case of the synthesis of 1e, [Ph2MePH]Br (3) was identified as a by-product. Deprotonation of 1 by KOtBu offers access to the corresponding phosphonium ylides [Ph2PCHPPh2R] (2a: R = Me; 2b: R = Et; 2c: R = iPr; 2d: R = CH2Mes) in good yields. Further deprotonation of 2a using n-butyllithium allows the isolation of the lithium complex [Li(Ph2PCHPPh2CH2)]n (4) and its monomeric tmeda adduct [(tmeda)Li(Ph2PCHPPh2CH2)] (4a). All compounds were characterized by NMR measurements and, except of 4, by X-ray diffraction experiments. Keywords: Phosphonium salt, phosphonium ylide, lithium, lithium phosphorus coupling Introduction Phosphonium ylides gained tremendous importance in organic chemistry, since Wittig and co- workers developed their alkene synthesis in the -
A New Withanolide from the Roots of Withania Somnifera
Indian Journal of Chemistry Vol. 47B, March 2008, pp. 485-487 Note Synthetic potentiality of α-chloronitrone in The most remarkable feature of both the nitrones 2 aldehyde synthesis: A new approach 1a,b is that they undergo SN reaction with benzyl chloride leading to the formation of benzaldehyde, a Bhaskar Chakraborty* & Manjit Singh Chhetri significant reaction in nitrone chemistry which Organic Chemistry Laboratory, Sikkim Govt. College proceeds through SNi reaction initially and forms Gangtok 737 102, India transient nitrones 2a,b. A new mechanistic pathway E-mail: [email protected] has been suggested for the synthesis of aldehyde (Scheme I). Received 9 August 2007; accepted (revised) 12 December 2007 The lone pair of electrons of the OH group of the i N-Phenyl-N-cyclohexyl-α-chloronitrones have been synthe- nitrones 1a,b play the most significant role in SN sized and a new method of synthesis of aldehyde has been mechanism for the formation of transient nitrones discovered involving SNi and SN2 reactions with benzyl chloride. 2a,b which reacts very quickly with benzyl chloride 2 and results in the formation of benzaldehyde with a Keywords: N-Phenyl-N-cyclohexyl-α-chloronitrone, SN reac- very good yield (72% and 63% respectively) along tion, aldehyde synthesis with furan derivative. The synthesis of N-phenyl-N-cyclohexyl-α-chloro- nitrones1 1a,b and their 1,3-dipolar cycloaddition Experimental Section reaction with different dipolarophiles have been Hand drawn silica gel (E. Merck) plates of 0.5-0.7 already established. Existing reports2-7 already mm thickness are used for TLC. -
Heterocyclic Chemistrychemistry
HeterocyclicHeterocyclic ChemistryChemistry Professor J. Stephen Clark Room C4-04 Email: [email protected] 2011 –2012 1 http://www.chem.gla.ac.uk/staff/stephenc/UndergraduateTeaching.html Recommended Reading • Heterocyclic Chemistry – J. A. Joule, K. Mills and G. F. Smith • Heterocyclic Chemistry (Oxford Primer Series) – T. Gilchrist • Aromatic Heterocyclic Chemistry – D. T. Davies 2 Course Summary Introduction • Definition of terms and classification of heterocycles • Functional group chemistry: imines, enamines, acetals, enols, and sulfur-containing groups Intermediates used for the construction of aromatic heterocycles • Synthesis of aromatic heterocycles • Carbon–heteroatom bond formation and choice of oxidation state • Examples of commonly used strategies for heterocycle synthesis Pyridines • General properties, electronic structure • Synthesis of pyridines • Electrophilic substitution of pyridines • Nucleophilic substitution of pyridines • Metallation of pyridines Pyridine derivatives • Structure and reactivity of oxy-pyridines, alkyl pyridines, pyridinium salts, and pyridine N-oxides Quinolines and isoquinolines • General properties and reactivity compared to pyridine • Electrophilic and nucleophilic substitution quinolines and isoquinolines 3 • General methods used for the synthesis of quinolines and isoquinolines Course Summary (cont) Five-membered aromatic heterocycles • General properties, structure and reactivity of pyrroles, furans and thiophenes • Methods and strategies for the synthesis of five-membered heteroaromatics -
Nitrogen, Oxygen and Sulfur Ylide Chemistry; Edited by JS Clark
1134 BOOKREVIEW Nitrogen, Oxygen and Sulfur Ylide Chemistry; edited fer protocol midway through. In addition to the carbene- by J. S. Clark; Oxford University Press: Oxford, 2002; and carbenoid-mediated methods in this chapter, two sec- hardback, £80.00, pp 292, ISBN 0-19-850017-3. tions by Sato deal with the desilylation of α-silylated ammonium and sulfonium salts. Ammonium and sulfonium ylides have been recognised The following chapter, on azomethine, carbonyl and thio- and utilised as intermediates in various reactions since carbonyl ylides, encompasses a wider range of synthetic the discovery of the Stevens rearrangement some sev- methods. In addition to the use of diazo compounds in enty-five years ago. In the past two or three decades, both intra- and intermolecular reactions, there are sec- however, the field has undergone a rapid expansion and tions on the generation of azomethine ylides by conden- now incorporates many useful transformations of oxo- sation of amines with aldehydes and by oxidation of nium, as well as ammonium and sulfonium ylides. The bis(silylmethyl)amines, and on the generation of carbo- reasons for this expansion are twofold – firstly, there has nyl ylides by reduction of bis(chloroalkyl)ethers. The been a recognition of the power and versatility of these final short chapter, on nitrile ylide chemistry, covers two intermediates for synthesis of complex organic mole- methods: the reaction of nitriles with metal carbenes and cules; and secondly, catalytic methods for their genera- the thermolysis of oxazaphospholines. tion have been developed which are milder, cleaner and Overall, the book achieves its aim of providing a useful more flexible than the traditional method of salt deproto- introduction to modern practical methods in ylide chem- nation.