Management of Carrot Diseases Common Post-Harvest Diseases the fi Eld Before Harvest

Total Page:16

File Type:pdf, Size:1020Kb

Management of Carrot Diseases Common Post-Harvest Diseases the fi Eld Before Harvest VEGEnotes Carrot Diseases CarVY only infects carrots and closely related Black root rot plants e.g. parsnip, coriander and chervil. Two fungi cause black root rot: Thielaviopsis Control basicola (Chalara elegans) and Chalaropsis • Avoid planting sequential side-by-side crops thielavioides. Roots affected by black root and separate crops by planting non-hosts, rot have large black superfi cial patches on them. These patches are often circular and VEGE such as brassicas, between them notes sometimes surrounded by a matt white halo. • Remove volunteer carrots and harvested carrot crops promptly Disease cycle Your levy @ work • Use a fallow period to break the infection The fungi that cause black root rot have a cycle wide host range and occur in soil. Carrots are likely to be contaminated with these fungi in Management of Carrot Diseases Common post-harvest diseases the fi eld before harvest. Bacterial soft rot Common leaf diseases • Use seed that has been treated with After harvest the fungi infect carrots through fungicide This is a soft, slimy, orange rot that can occur wounds or abrasions. Leaf blight • Use fungicide sprays, such as chlorothalonil, on any part of the carrot, although it is often They develop rapidly on Leaf blight is an extremely common, quickly copper, difenoconazole, mancozeb, metiram associated with the eyes. The rot can penetrate carrots stored at 25°C spreading fungal disease that initially occurs and zineb. Start the spraying program when deeply. It does not usually smell unpleasant and in high humidity. as patches within crops. The symptoms of the fi rst sign of blight appears unless there is secondary infection caused by Control leaf blight are small brown, dead spots on the other bacteria. Common root diseases • Losses caused by leaves and petioles (leaf stalks). These spots Soft rot is caused by black root rot can be grow rapidly and eventually join so that the Sclerotinia or cottony rot leaf yellows and dies. The petioles also break either Erwinia carotovora minimised by rapid Sclerotinia is a common fungal disease that during harvesting. subspecies carotovora or cooling of harvested affects many vegetables. It E. carotovora subspecies carrots and storing There are two types of leaf blight, Alternaria affects carrots both in the atroseptica. them at 0°C and Cercospora. Alternaria leaf blight is fi eld and in storage and Disease cycle • Minimise mechanical Symptoms of black caused by Alternaria dauci and/or A. radicina is caused by the fungus root rot. damage during and usually fi rst appears on the oldest Sclerotinia sclerotiorum. Erwinia spp. are common leaves. Cercospora leaf blight is caused harvesting and in the packing shed In the fi eld, the fi rst soil bacteria that survive on by Cercospora carotae and appears on the symptoms are water- crop residues. Carrots are Sclerotinia rot or cottony rot youngest leaves fi rst. likely to be contaminated soaked spots at the base with soft rot bacteria in See Sclerotinia above. Disease cycle of the petioles and at the fi eld before harvest. Further Information Both Alternaria and Cercospora can be carried the crown. The outer Symptoms of bacterial However, these bacteria on carrot seeds and once introduced into an leaves redden and wilt. soft rot. Dr Elaine Davison are readily spread in area will survive on carrot debris. They can There is often a white, Department of Agriculture Western Australia washing water during post- spread easily during rain or irrigation and can cottony fungal growth ph: (08) 9368 3690 harvest handling. also be carried on machinery. in the surrounding soil. email: [email protected] Eventually the top of the Soft rot bacteria enter carrots through wounds, Control Acknowledgements carrot becomes soft and but they can also be forced into the eyes if warm • Disease control is diffi cult on farms where slimy. carrots are dumped into deep cold water tanks. Dr Elaine Davison carrots are planted sequentially Once the bacteria are in the carrot root they Allan McKay • Some carrot varieties are more tolerant of cannot be killed by sanitisers such as chlorine. Dr Roger Jones Symptoms of sclerotinia. leaf blight than others Control Disclaimer: The Chief Executive Offi cer of the Department of Agriculture and the State of • Losses caused by soft rot bacteria can be Western Australia accept no liability whatsoever by reason of negligence or otherwise arising from the use or release of this information or any part of it. The Bottom Line minimised by cooling carrots as soon as • Fungal, nematode, viral and bacterial possible after harvest and then storing them DISCLAIMER: Every attempt is made to ensure the accuracy of all diseases can affect carrots at any stage of at 0°C statements and claims made in Vegenotes. However, due to the nature of the crop, from seedlings to cold storage • Minimise mechanical damage during the industry, it is impossible for us to know your precise circumstances. Therefore, we disclaim any responsibility for any action you take as a • Root and post-harvest diseases affect harvesting and in the packing shed result of reading Vegenotes. marketability of carrots, while foliar diseases affect the yield of crops ISSN: 1449 - 1397 Copyright©: Horticulture Australia 2004 Level 1, 50 Carrington Street • For export, growers should ensure that No part of this publication can be copied or reproduced without Sydney NSW 2000 Australia chemical use complies with the maximum the permission of the original authors. Telephone (02) 8295 2300 residue limits of the importing country Symptoms of leaf blight. VEGEnotes is coordinated, edited & printed by: Facsimile (02) 8295 2399 ARRIS Pty Ltd, ph 08 8303 7247 fax 08 8303 6752 www.horticulture.com.au Your levy @ work Spring 2004 VEGEnotes Carrot Diseases If slightly infected carrots are harvested the rot Disease cycle Disease cycle The four species of root lesion nematode continues to develop during storage and can Pythium spp. are soil borne pathogens that Root knot nematodes are diffi cult to control in Australia that infect carrots are: spread to adjacent carrots. persist as resting spores between crops. because they have wide host ranges. They Pratylenchus crenatus, P. neglectus, P. are more usually a problem in sandy soil. penetrans and P. thornei. These carrots then develop a soft, watery, slimy Pythium sulcatum only infects carrots and Root knot nematodes survive between crops rot at the crown. A white cottony fungus develops closely related plants, it can survive for at least Disease cycle on alternate hosts and in egg masses in the from this rot; it often contains small black two years between carrot crops. Pythium Like root knot nematodes, Pratylenchus are soil. sclerotes that look like mouse droppings. violae has a much wider host range and can diffi cult to control because they have wide Disease cycle survive for at least fi ve years between carrot When conditions are suitable, the eggs hatch host ranges, including cereal nurse crops. crops. and juvenile nematodes penetrate root tips. They are a problem in sandy soils and Sclerotinia is a common and widespread soil Female nematodes mature within the roots survive between crops either on alternate Cavity spot caused by Pythium sulcatum is borne pathogen, with a host range that includes and a gall develops around the nematode. hosts or as eggs in the soil. most severe in summer and autumn harvested both commercial crops and weeds. Black, hard These females lay eggs into a gelatinous crops, while cavity spot caused by Pythium When conditions are suitable, the eggs hatch sclerotes form on infected plant debris and these matrix on the root surface. The eggs either violae is most severe in winter harvested and juvenile nematodes penetrate carrot persist in the soil for up to fi ve years. hatch immediately or become dormant. crops. roots. The nematodes migrate and multiply Sclerotes close to the soil surface infect old Control within the roots. leaves and petioles. The infection spreads down Control • Soil sampling to assess the petioles to the crown, resulting in rotting at • Cavity spot control is diffi cult on farms with Control nematode numbers the top of the roots. limited rotation • Sample soil to assess nematode numbers before seeding is before seeding to determine whether a Control • Grow varieties such as Stefano and Navarre not always a reliable that are tolerant to cavity spot nematicide needs to be applied • Deep ploughing buries sclerotes formed on the indicator of whether a • Preplant fumigation with 1,3- • Do not allow carrots to become over mature soil surface nematicide needs to be dichloropropene, 1,3-dichloropropene • Check at www.apvma.gov.au to determine • Metalaxyl will reduce pythium diseases applied + chloropicrin, fenamiphos or metham which fungicides are registered for controlling when used at, or shortly after, seeding. If • Preplant fumigation with sodium. Minimise use due to the potential sclerotinia used frequently, metalaxyl may become 1,3-dichloropropene, for enhanced microbial degradation ineffective due to enhanced microbial 1,3-dichloropropene + • Post harvest losses are minimised by reducing Carrot virus Y (CarVY) mechanical damage during harvesting, by degradation chloropicrin, fenamiphos rapid cooling and storing carrots at 0°C • High soil pH can suppress cavity spot, or metham sodium. If CarVY is a serious disease, spread by however enhanced microbial degradation these chemicals are aphids and occuring throughout Australia. Cavity spot, damping off and root forking develops more rapidly on soils with high pH. used frequently they It infects carrots at any stage and is most Cavity spot is a widespread problem in Australia. Maintain soil pH in the range 6.5-7 in water may become ineffective Symptoms of root knot severe where carrots are grown all-year- nematode. because of enhanced round. It is particularly severe when carrots are grown (5.8-6.3 in CaCl2) microbial degradation with limited rotation.
Recommended publications
  • Activation of Defense Mechanisms Against Pathogens in Mosses and Flowering Plants
    Int. J. Mol. Sci. 2013, 14, 3178-3200; doi:10.3390/ijms14023178 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Review Activation of Defense Mechanisms against Pathogens in Mosses and Flowering Plants Inés Ponce de León 1,* and Marcos Montesano 2 1 Departamento de Biología Molecular, Instituto de Investigaciones Biológicas Clemente Estable, Avenida Italia 3318, CP 11600, Montevideo, Uruguay 2 Laboratorio de Fisiología Vegetal, Centro de Investigaciones Nucleares, Facultad de Ciencias, Mataojo 2055, CP 11400, Montevideo, Uruguay; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +598-24872605; Fax: +598-24875548. Received: 4 January 2013; in revised form: 23 January 2013 / Accepted: 23 January 2013 / Published: 4 February 2013 Abstract: During evolution, plants have developed mechanisms to cope with and adapt to different types of stress, including microbial infection. Once the stress is sensed, signaling pathways are activated, leading to the induced expression of genes with different roles in defense. Mosses (Bryophytes) are non-vascular plants that diverged from flowering plants more than 450 million years ago, allowing comparative studies of the evolution of defense-related genes and defensive metabolites produced after microbial infection. The ancestral position among land plants, the sequenced genome and the feasibility of generating targeted knock-out mutants by homologous recombination has made the moss Physcomitrella patens an attractive model to perform functional studies of plant genes involved in stress responses. This paper reviews the current knowledge of inducible defense mechanisms in P. patens and compares them to those activated in flowering plants after pathogen assault, including the reinforcement of the cell wall, ROS production, programmed cell death, activation of defense genes and synthesis of secondary metabolites and defense hormones.
    [Show full text]
  • The Pennsylvania State University
    The Pennsylvania State University The Graduate School Department of Plant Pathology and Environmental Microbiology CHARACTERIZATION OF Pythium and Phytopythium SPECIES FREQUENTLY FOUND IN IRRIGATION WATER A Thesis in Plant Pathology by Carla E. Lanze © 2015 Carla E. Lanze Submitted in Partial Fulfillment of the Requirement for the Degree of Master of Science August 2015 ii The thesis of Carla E. Lanze was reviewed and approved* by the following Gary W. Moorman Professor of Plant Pathology Thesis Advisor David M. Geiser Professor of Plant Pathology Interim Head of the Department of Plant Pathology and Environmental Microbiology Beth K. Gugino Associate Professor of Plant Pathology Todd C. LaJeunesse Associate Professor of Biology *Signatures are on file in the Graduate School iii ABSTRACT Some Pythium and Phytopythium species are problematic greenhouse crop pathogens. This project aimed to determine if pathogenic Pythium species are harbored in greenhouse recycled irrigation water tanks and to determine the ecology of the Pythium species found in these tanks. In previous research, an extensive water survey was performed on the recycled irrigation water tanks of two commercial greenhouses in Pennsylvania that experience frequent poinsettia crop loss due to Pythium aphanidermatum. In that work, only a preliminary identification of the baited species was made. Here, detailed analyses of the isolates were conducted. The Pythium and Phytopythium species recovered during the survey by baiting the water were identified and assessed for pathogenicity in lab and greenhouse experiments. The Pythium species found during the tank surveys were: a species genetically very similar to P. sp. nov. OOMYA1702-08 in Clade B2, two distinct species of unknown identity in Clade E2, P.
    [Show full text]
  • University of Dundee Genome Sequence of the Necrotrophic Plant
    University of Dundee Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire Levesque, C. Andre; Brouwer, Henk; Cano, Liliana; Hamilton, John P.; Holt, Carson; Huitema, Edgar Published in: Genome Biology DOI: 10.1186/gb-2010-11-7-r73 Publication date: 2010 Licence: CC BY Document Version Publisher's PDF, also known as Version of record Link to publication in Discovery Research Portal Citation for published version (APA): Levesque, C. A., Brouwer, H., Cano, L., Hamilton, J. P., Holt, C., Huitema, E., Raffaele, S., Robideau, G. P., Thines, M., Win, J., Zerillo, M. M., Beakes, G. W., Boore, J. L., Busam, D., Dumas, B., Ferriera, S., Fuerstenberg, S. I., Gachon, C. M. M., Gaulin, E., ... Buell, C. R. (2010). Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire. Genome Biology, 11(7), -. [R73]. https://doi.org/10.1186/gb-2010-11-7-r73 General rights Copyright and moral rights for the publications made accessible in Discovery Research Portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from Discovery Research Portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain. • You may freely distribute the URL identifying the publication in the public portal. Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim.
    [Show full text]
  • Epidemiology of Pythium Sulcatum Associated with Brown-Blotted Root Rot of Carrots
    日 植 病 報 62: 130-133 (1996) Ann. Phytopathol. Soc. Jpn. 62: 130-133 (1996) Epidemiology of Pythium sulcatum Associated with Brown-blotted Root Rot of Carrots Koji KAGEYAMA*, Misako TACHI*, Masakazu UMETSU* and Mitsuro HYAKUMACHI* Abstract Pythium sulcatum was a predominant species isolated from carrot lesions showing brown-blotted root rot, and induced the similar symptoms to those naturally occurring in carrot fields with artificial inoculation. The fungus was also isolated from asymptomatic storage and absorbing roots from seedling to harvest stage, especially during spring cropping season. The infection sites of P. sulcatum was the upper part of asymptomatic storage roots in which the blotted lesion might appear. P. ultimum, P. sylvaticum, P. coloratum and P. spinosum were also obtained from asymptomatic roots and residues of root or leaf, but these species showed slight pathogenicity. The absorbing root residue was found to be the primary infection source of P. sulcatum. P. sulcatum was widespread in the intensive carrot-cultivated area. (Received September 20, 1995; Accepted December 27, 1995) Key words: carrot, Pythium sulcatum, brown-blotted root rot, epidemiology. lesions were cut into ca. 5mm blocks, directly plated on INTRODUCTION the Pythium selective medium4) (cornmeal agar (CMA) amended with 5mg/l pimaricin, 100mg/l pentachloro- Brown-blotted root rot of carrot (Daucus carota L.) nitrobenzene and 100mg/l agrimycin), and incubated at first occurred in a main carrot-producing area of Chiba 25•Ž in the dark for 3-7 days. Prefecture9), and later in Kakamigahara of Gifu Prefec- Carrot materials together with storage and absorbing ture in which carrots have been cropped twice in a year.
    [Show full text]
  • Pythium Sulcatum, Symptoms of Cavity Spot on Mature Carrot, Root Dieback on Seedlings, and Forking Resulting from Seedling Damage
    MAY 13Pathogen of the month – May 2013 Fig. Oospores of Pythium sulcatum, symptoms of cavity spot on mature carrot, root dieback on seedlings, and forking resulting from seedling damage. Disease: Cavity spot of carrots (Daucus carota); Causal agent: Pythium sulcatum Classification: K: Chromista, D: Oomycota, C: Oomycetes, O: Pythiales, F: Pythiaceae Cavity spot is a widespread field disease of carrots. The spots are sunken, circular to elliptical lesions usually less than 10 mm across, and sometimes surrounded by a pale halo. The spots develop rapidly on roots that are close to harvest; severely affected carrots are unmarketable. This disease is mainly caused by P. sulcatum in Australia, but other Pythium spp. such P. violae are more important overseas. Biology and Ecology: Pythium spp. survive in Host Range: P. sulcatum is unusual in that its soil from many years as thick walled oospores. host range is limited to members of the family They produce zoospores in wet soil, so that Apiaceae, it can survive for at least 2 years disease severity can increase rapidly in wet between carrot crops. P. violae can infect a weather. much wider range of plants, which include many R.G. Pratt & J.E. Mitch. & J.E. R.G. Pratt crops such as wheat, lucerne and broccoli. P. sulcatum survives mainly as oospores; most isolates do not produce zoospores as Disease Impact: Carrots are an important crop abundantly as other species. It can be isolated in Australia where they are grown for the from carrot plants at all stages of development, domestic and export markets. Cavity spot is but symptoms of cavity spot usually appear common in crops that are grown with either no only when plants are close to maturity.
    [Show full text]
  • Microbial Suppression of Pythium Root Rot in Soilless Systems
    Microbial Suppression of Pythium Root Rot in Soilless Systems Cora McGehee B.S. Louisiana State University, 2015 A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science At the University of Connecticut 2018 Copyright by Cora Shields McGehee 2018 ii APPROVAL PAGE Master Thesis Microbial Suppression of Pythium Root Rot in Soilless Systems Presented by Cora Shields McGehee, B.S. Major Advisor_________________________________________________________________ Rosa E. Raudales Associate Advisor______________________________________________________________ Wade H. Elmer Associate Advisor_______________________________________________________________ Richard J. McAvoy University of Connecticut 2018 iii Acknowledgements I am beyond grateful to my major advisor Dr. Rosa Raudales for her hard work and dedication to the lab and innovative research projects. Her guidance and patience has made me into a stronger researcher and diligent worker. I also want to thank the other members of my committee Dr. Wade Elmer and Dr. Richard McAvoy for their time and generous advice. I want to thank Frederick Pettit, Shelley Durocher, and Ronald Brine for their assistance in the various greenhouse projects conducted. Thank you Margery Daughtrey for supplying isolates for experiments. Special thanks to Juan Cabrera, Sohan Aziz, Steve Olenski, Joy Tosakoon, and Carla Caballero for giving your time to help with experiments. Lastly a thank you to the office staff, Christine Strand and Nicole Gabelman for their assistance and kindness. Special thanks to the U.S. Department of Agriculture via the Connecticut Department of Agriculture Specialty Crop Block Grant # AG151260 for its support and funding of this work. Thank you to friends and family who supported me over the phone during this intense intellectual pursuit.
    [Show full text]
  • Carrot Cavity Spot
    Factsheet 03/03 Horticultural Bradbourne House Development East Malling Council Kent ME19 6DZ Carrots T: 01732 848383 F: 01732 848498 Project No. FV 5a–f E: [email protected] Carrot cavity spot By Tim Pettitt, HRI Wellesbourne and Peter Gladders, ADAS Cavity spot of carrot, caused by slow-growing Pythium species, is currently the most economically important disease problem in UK carrot crops. Affected carrots, with only one or two visible lesions, are rejected at grading. When disease incidence in the field passes a relatively low threshold it becomes uneconomical to harvest crops. This means that virtually 100% control is necessary to avoid economic losses. In a severe cavity spot season, 15–20% or more of crops can be rejected by pack-houses. This amounts to an estimated loss of £10.2 –13.6 million based on the 2000–2001 value of the crop (DEFRA Horticultural Statistics, 2001). Although good control of the disease was achieved in the early 1980s with metalaxyl and related fungicides, there have recently been increasing problems in the management of cavity spot. This factsheet summarises recent HDC funded research and its application for management of the disease. Symptoms of cavity spot The appearance of cavities normally starts as small, pale, sunken elliptical spots, under an apparently intact outer skin. These lesions gradually darken in colour to a greyish brown and, depending on environmental conditions (see below), they may increase in size rapidly, or expand more slowly with the natural growth of the carrot root. Eventually, the outer skin ruptures, leaving an open cavity where the tissues underneath have been attacked by the fungus and secondary organisms.
    [Show full text]
  • Management of Damping-Off Caused by Pythium Spp. in Organic
    MANAGEMENT OF DAMPING-OFF CAUSED BY PYTHIUM SPP. IN ORGANIC VEGETABLE PRODUCTION IN THE PACIFIC NORTHWEST By ANA VIDA CRISOSTOMO ALCALA A thesis submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY WASHINGTON STATE UNIVERSITY Department of Plant Pathology JULY 2013 To the Faculty of Washington State University: The members of the Committee appointed to examine the dissertation of ANA VIDA CRISOSTOMO ALCALA find it satisfactory and recommend that it be accepted. __________________________________ Lindsey du Toit, Ph.D., Chair __________________________________ Carol Miles, Ph.D. __________________________________ Tim Paulitz, Ph.D. __________________________________ Lyndon Porter, Ph.D. ii ACKNOWLEDGEMENTS Professional I am greatly indebted to four great scientists who mentored me in my PhD. My deepest gratitude is to Dr. Lindsey du Toit, my major advisor, for opening the door of opportunity for me to pursue my Ph.D. in the US, and for providing me with every chance to develop a variety of skills essential for this profession. Her enthusiasm, passion, and dedication to research have been inspirational to me. To my committee members, Dr. Carol Miles, Dr. Tim Paulitz, and Dr. Lyndon Porter, who generously took time to mentor me, by distance or whenever I got a chance to work on campus, as well as for generously sharing their expertise. To the very hardworking VSP crew: Mike, Barb, Sarah, John, and Anita, for all their help in one or many aspects of this project. Particularly to Mike, for his expertise and tremendous help in my field, greenhouse, and lab trials; Barb, for always being ready to help even beyond the call of duty, and for always making what seemed an impossible task possible.
    [Show full text]
  • University of Florida Thesis Or Dissertation Formatting
    INNOVATIVE TOOLS FOR STUDYING PLANT-RELATED OOMYCETE POPULATIONS OF POTENTIAL AND CURRENT THREAT IN AGRICULTURE IN ECUADOR By MARIA FERNANDA RATTI TORRES A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 2018 © 2018 Maria Fernanda Ratti Torres To my Obi-Wan Roberto, Yoda one for me. You have been nothing but supportive during these years, you make me proud of being your wife, but above all, you make me immensely happy. This is for you and for a marriage that has been put to rest for so long and it is ready to resume. ACKNOWLEDGMENTS I wish to thank my parents for all their effort and the patience, they are my pillar without whom I could not have pursued my Ph.D. studies. Also to my siblings Andrea and Pablo, my brother in law Carlos and my nephews, not only for their support, but for joking around all the time and cheering me up during this journey. Erica M. Goss deserves a special section only for her, but the formatting will not allow it. I cannot imagine having spent these years under anybody else’s guidance. She always challenged me to be better, to be calmed during stressful situations and to trust in myself. Her advices will be forever in my mind. Doing this research would have been impossible without helping hands around the world: Thanks to Esther Lilia P. for all her support, to Juan C., Carlos A., Jerry L.
    [Show full text]
  • Final Report
    Final Report Effective Management of Parsley Summer Root Rot Project leader: Dr Len Tesoriero Delivery partner: NSW Department of Primary Industries Project code: VG13101 Hort Innovation – Final Report Project: Effective Management of Parsley Summer Root Rot – VG13101 Disclaimer: Horticulture Innovation Australia Limited (Hort Innovation) makes no representations and expressly disclaims all warranties (to the extent permitted by law) about the accuracy, completeness, or currency of information in this Final Report. Users of this Final Report should take independent action to confirm any information in this Final Report before relying on that information in any way. Reliance on any information provided by Hort Innovation is entirely at your own risk. Hort Innovation is not responsible for, and will not be liable for, any loss, damage, claim, expense, cost (including legal costs) or other liability arising in any way (including from Hort Innovation or any other person’s negligence or otherwise) from your use or non‐use of the Final Report or from reliance on information contained in the Final Report or that Hort Innovation provides to you by any other means. Funding statement: This project has been funded by Hort Innovation, using the vegetable research and development levy, co‐ investment from NSW Department of Primary Industries and contributions from the Australian Government. Hort Innovation is the grower‐owned, not‐for‐profit research and development corporation for Australian horticulture. Publishing details: ISBN 978 0 7341 4454
    [Show full text]
  • Using Genomic Data to Understand Anthropogenic Influences on Oomycete and Phytophthora Communities, and the Evolution of an Alie
    USING GENOMIC DATA TO UNDERSTAND ANTHROPOGENIC INFLUENCES ON OOMYCETE AND PHYTOPHTHORA COMMUNITIES, AND THE EVOLUTION OF AN ALIEN INVASIVE SPECIES RESPONSIBLE FOR SUDDEN OAK DEATH, PHYTOPHTHORA RAMORUM. by ANGELA DALE A DISSERTATION SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in THE FACULTY OF GRADUATE AND POSTDOCTORAL STUDIES (Forestry) THE UNIVERSITY OF BRITISH COLUMBIA (Vancouver) April 2018 © Angela Dale, 2018 Abstract Emerging Phytophthora pathogens, often introduced, represent a threat to natural ecosystems. Phytophthora species are known for rapid adaptation and hybridization, which may be facilitated by anthropogenic activities. Little is known about natural Phytophthora and oomycete populations, or mechanisms behind rapid adaptation. We surveyed oomycete and Phytophthora communities from southwest B.C. under varying anthropogenic influences (urban, interface, natural) to determine effects on diversity, introductions and migration. We used DNA meta- barcoding to address these questions on oomycetes. We then focused on Phytophthora, adding baiting and culturing methods, and further sub-dividing urban sites into agricultural or residential. Finally, we studied an alien invasive species, Phytophthora ramorum responsible for sudden oak death, and how it overcame the invasion paradox, limited to asexual reproduction and presumed reduced adaptability. Anthropogenic activities increase oomycete and Phytophthora diversity. Putative introduced species and hybrids were more frequent in urban sites. Migration is suggested by shared species between urban and interface sites, and two known invasive species found in natural and interface sites. Different anthropogenic activities influence different communities. Abundance increased for some species in either residential or agricultural sites. Two hybrids appear to be spreading in different agricultural sites.
    [Show full text]
  • A Desk Study to Review Global Knowledge on Best Practice for Oomycete Root-Rot Detection and Control
    Project title: A desk study to review global knowledge on best practice for oomycete root-rot detection and control Project number: CP 126 Project leader: Dr Tim Pettitt Report: Final report, March 2015 Previous report: None Key staff: Dr G M McPherson Dr Alison Wakeham Location of project: University of Worcester Stockbridge Technology Centre Industry Representative: Russ Woodcock, Bordon Hill Nurseries Ltd, Bordon Hill, Stratford-upon-Avon, Warwickshire, CV37 9RY Date project commenced: April 2014 Date project completed April 2015 AHDB Horticulture is a Division of the Agriculture and Horticulture Development Board DISCLAIMER While the Agriculture and Horticulture Development Board seeks to ensure that the information contained within this document is accurate at the time of printing, no warranty is given in respect thereof and, to the maximum extent permitted by law the Agriculture and Horticulture Development Board accepts no liability for loss, damage or injury howsoever caused (including that caused by negligence) or suffered directly or indirectly in relation to information and opinions contained in or omitted from this document. ©Agriculture and Horticulture Development Board 2015. No part of this publication may be reproduced in any material form (including by photocopy or storage in any medium by electronic mean) or any copy or adaptation stored, published or distributed (by physical, electronic or other means) without prior permission in writing of the Agriculture and Horticulture Development Board, other than by reproduction in an unmodified form for the sole purpose of use as an information resource when the Agriculture and Horticulture Development Board or AHDB Horticulture is clearly acknowledged as the source, or in accordance with the provisions of the Copyright, Designs and Patents Act 1988.
    [Show full text]