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The Lichens' Microbiota, Still a Mystery?
fmicb-12-623839 March 24, 2021 Time: 15:25 # 1 REVIEW published: 30 March 2021 doi: 10.3389/fmicb.2021.623839 The Lichens’ Microbiota, Still a Mystery? Maria Grimm1*, Martin Grube2, Ulf Schiefelbein3, Daniela Zühlke1, Jörg Bernhardt1 and Katharina Riedel1 1 Institute of Microbiology, University Greifswald, Greifswald, Germany, 2 Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria, 3 Botanical Garden, University of Rostock, Rostock, Germany Lichens represent self-supporting symbioses, which occur in a wide range of terrestrial habitats and which contribute significantly to mineral cycling and energy flow at a global scale. Lichens usually grow much slower than higher plants. Nevertheless, lichens can contribute substantially to biomass production. This review focuses on the lichen symbiosis in general and especially on the model species Lobaria pulmonaria L. Hoffm., which is a large foliose lichen that occurs worldwide on tree trunks in undisturbed forests with long ecological continuity. In comparison to many other lichens, L. pulmonaria is less tolerant to desiccation and highly sensitive to air pollution. The name- giving mycobiont (belonging to the Ascomycota), provides a protective layer covering a layer of the green-algal photobiont (Dictyochloropsis reticulata) and interspersed cyanobacterial cell clusters (Nostoc spec.). Recently performed metaproteome analyses Edited by: confirm the partition of functions in lichen partnerships. The ample functional diversity Nathalie Connil, Université de Rouen, France of the mycobiont contrasts the predominant function of the photobiont in production Reviewed by: (and secretion) of energy-rich carbohydrates, and the cyanobiont’s contribution by Dirk Benndorf, nitrogen fixation. In addition, high throughput and state-of-the-art metagenomics and Otto von Guericke University community fingerprinting, metatranscriptomics, and MS-based metaproteomics identify Magdeburg, Germany Guilherme Lanzi Sassaki, the bacterial community present on L. -
Checklist of Argentine Agaricales 4
Checklist of the Argentine Agaricales 4. Tricholomataceae and Polyporaceae 1 2* N. NIVEIRO & E. ALBERTÓ 1Instituto de Botánica del Nordeste (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina 2Instituto de Investigaciones Biotecnológicas (UNSAM-CONICET) Intendente Marino Km 8.200, Chascomús, Buenos Aires, CP 7130, Argentina CORRESPONDENCE TO *: [email protected] ABSTRACT— A species checklist of 86 genera and 709 species belonging to the families Tricholomataceae and Polyporaceae occurring in Argentina, and including all the species previously published up to year 2011 is presented. KEY WORDS—Agaricomycetes, Marasmius, Mycena, Collybia, Clitocybe Introduction The aim of the Checklist of the Argentinean Agaricales is to establish a baseline of knowledge on the diversity of mushrooms species described in the literature from Argentina up to 2011. The families Amanitaceae, Pluteaceae, Hygrophoraceae, Coprinaceae, Strophariaceae, Bolbitaceae and Crepidotaceae were previoulsy compiled (Niveiro & Albertó 2012a-c). In this contribution, the families Tricholomataceae and Polyporaceae are presented. Materials & Methods Nomenclature and classification systems This checklist compiled data from the available literature on Tricholomataceae and Polyporaceae recorded for Argentina up to the year 2011. Nomenclature and classification systems followed Singer (1986) for families. The genera Pleurotus, Panus, Lentinus, and Schyzophyllum are included in the family Polyporaceae. The Tribe Polyporae (including the genera Polyporus, Pseudofavolus, and Mycobonia) is excluded. There were important rearrangements in the families Tricholomataceae and Polyporaceae according to Singer (1986) over time to present. Tricholomataceae was distributed in six families: Tricholomataceae, Marasmiaceae, Physalacriaceae, Lyophyllaceae, Mycenaceae, and Hydnaginaceae. Some genera belonging to this family were transferred to other orders, i.e. Rickenella (Rickenellaceae, Hymenochaetales), and Lentinellus (Auriscalpiaceae, Russulales). -
Diversity of Species of the Genus Conocybe (Bolbitiaceae, Agaricales) Collected on Dung from Punjab, India
Mycosphere 6(1): 19–42(2015) ISSN 2077 7019 www.mycosphere.org Article Mycosphere Copyright © 2015 Online Edition Doi 10.5943/mycosphere/6/1/4 Diversity of species of the genus Conocybe (Bolbitiaceae, Agaricales) collected on dung from Punjab, India Amandeep K1*, Atri NS2 and Munruchi K2 1Desh Bhagat College of Education, Bardwal-Dhuri-148024, Punjab, India 2Department of Botany, Punjabi University, Patiala-147002, Punjab, India. Amandeep K, Atri NS, Munruchi K 2015 – Diversity of species of the genus Conocybe (Bolbitiaceae, Agaricales) collected on dung from Punjab, India. Mycosphere 6(1), 19–42, Doi 10.5943/mycosphere/6/1/4 Abstract A study of diversity of coprophilous species of Conocybe was carried out in Punjab state of India during the years 2007 to 2011. This research paper represents 22 collections belonging to 16 Conocybe species growing on five diverse dung types. The species include Conocybe albipes, C. apala, C. brachypodii, C. crispa, C. fuscimarginata, C. lenticulospora, C. leucopus, C. magnicapitata, C. microrrhiza var. coprophila var. nov., C. moseri, C. rickenii, C. subpubescens, C. subxerophytica var. subxerophytica, C. subxerophytica var. brunnea, C. uralensis and C. velutipes. For all these taxa, dung types on which they were found growing are mentioned and their distinctive characters are described and compared with similar taxa along with a key for their identification. The taxonomy of ten taxa is discussed along with the drawings of morphological and anatomical features. Conocybe microrrhiza var. coprophila is proposed as a new variety. As many as six taxa, namely C. albipes, C. fuscimarginata, C. lenticulospora, C. leucopus, C. moseri and C. -
Aphyllophoraceous Wood-Inhabiting Fungi on Quercus Spp. in Italy
Posted June, 2008. Summary published in Mycotaxon 104: 425–428. 2008. Aphyllophoraceous wood-inhabiting fungi on Quercus spp. in Italy 1 1 ANNAROSA BERNICCHIA , ALESSANDRO BENNI ,GIUSEPPE 2 2 2 VENTURELLA , MARIA LETIZIA GARGANO , ALESSANDRO SAITTA & 3 SERGIO PÉREZ GORJÓN [email protected] [email protected] [email protected] [email protected] [email protected] [email protected] 1Dipartimento di Scienze e Tecnologie Agroambientali, Patologia Vegetale Università degli Studi di Bologna, Via Fanin 42, 40127 Bologna Italy 2Dipartimento di Scienze Botaniche, Università di Palermo, Via Archirafi 38, 90123 Palermo Italy 3Departamento de Botánica & Centro Hispano-Luso de Investigaciones Agrarias Universidad de Salamanca, Ldo. Méndez Nieto s/n, 37007 Salamanca Spain Abstract─240 species representing 100 genera of aphyllophoraceous fungi growing on Quercus spp. in Italy are listed. Some species are considered rare or infrequent in Italy, e.g. Bulbillomyces farinosus, Dendrothele dryina, Fomitopsis iberica, F. spraguei, Hyphoderma incrustatum, Inonotus andersonii. Key words─lignicolous fungi, diversity, oak woods Introduction In line with previous reports on Italian lignicolous fungi (Bernicchia 2000, Mayrhofer et al. 2001, Pérez Gorjón et al. 2006, Bernicchia et al. 2007a, b, c), a list of aphyllophoraceous fungi growing on Quercus spp. is announced. Oak forests are widely distributed in Europe, and 20 taxa of the genus Quercus L. occur in the European sector of Mediterranean region (Webb 1993). In Italy, the following species are widely distributed: Q. cerris L., Q. ilex L., Q. pubescens Willd., Q. petraea (Matt.) Liebl., Q. robur L. subsp. robur and Q. suber L.; these were the most common substrates from which aphyllophoraceous fungi have been collected. -
Supplementary Materials 1
Supplementary materials 1 Table S1 The characteristics of botanical preparations potentially containing alkenylbenzenes on the Chinese market. Botanical Pin Yin Name Form Ingredients Recommendation for daily intake (g) preparations (汉语) Plant food supplements (PFS) Si Ji Kang Mei Yang Xin Yuan -Rou Dou Kou xylooligosaccharide, isomalt, nutmeg (myristica PFS 1 Fu He Tang Pian tablet 4 tablets (1.4 g) fragrans), galangal, cinnamon, chicken gizzards (四季康美养心源-肉豆蔻复合糖片) Ai Si Meng Hui Xiang fennel seed, figs, prunes, dates, apples, St.Johns 2-4 tablets (2.8-5.6 g) PFS 2 Fu He Pian tablet Breed, jamaican ginger root (爱司盟茴香复合片) Zi Ran Mei Xiao Hui Xiaong Jiao Nang foeniculi powder, cinnamomi cortex, papaya PFS 3 capsule concentrated powder, green oat concentrated powder, 3 capsules (1.8 g) (自然美小茴香胶囊) brewer’s yeast, cabbage, monkey head mushroom An Mei Qi Hui Xiang Cao Ben Fu He Pian fennel seed, perilla seed, cassia seed, herbaceous PFS 4 tablet 1-2 tablets (1.4-2.8 g) (安美奇茴香草本复合片) complex papaya enzymes, bromelain enzymes, lactobacillus An Mei Qi Jiao Su Xian Wei Ying Yang Pian acidophilus, apple fiber, lemon plup fiber, fennel PFS 5 tablet seed, cascara sagrada, jamaican ginger root, herbal 2 tablets (2.7 g) (安美奇酵素纤维营养片) support complex (figs, prunes, dates, apples, St. Johns bread) Table S1 (continued) The characteristics of botanical preparations potentially containing alkenylbenzenes on the Chinese market. Pin Yin Name Botanical Form Ingredients Recommendation for daily intake (g) preparations (汉语) Gan Cao Pian glycyrrhiza uralensis, licorice -
Pt Reyes Species As of 12-1-2017 Abortiporus Biennis Agaricus
Pt Reyes Species as of 12-1-2017 Abortiporus biennis Agaricus augustus Agaricus bernardii Agaricus californicus Agaricus campestris Agaricus cupreobrunneus Agaricus diminutivus Agaricus hondensis Agaricus lilaceps Agaricus praeclaresquamosus Agaricus rutilescens Agaricus silvicola Agaricus subrutilescens Agaricus xanthodermus Agrocybe pediades Agrocybe praecox Alboleptonia sericella Aleuria aurantia Alnicola sp. Amanita aprica Amanita augusta Amanita breckonii Amanita calyptratoides Amanita constricta Amanita gemmata Amanita gemmata var. exannulata Amanita calyptraderma Amanita calyptraderma (white form) Amanita magniverrucata Amanita muscaria Amanita novinupta Amanita ocreata Amanita pachycolea Amanita pantherina Amanita phalloides Amanita porphyria Amanita protecta Amanita velosa Amanita smithiana Amaurodon sp. nova Amphinema byssoides gr. Annulohypoxylon thouarsianum Anthrocobia melaloma Antrodia heteromorpha Aphanobasidium pseudotsugae Armillaria gallica Armillaria mellea Armillaria nabsnona Arrhenia epichysium Pt Reyes Species as of 12-1-2017 Arrhenia retiruga Ascobolus sp. Ascocoryne sarcoides Astraeus hygrometricus Auricularia auricula Auriscalpium vulgare Baeospora myosura Balsamia cf. magnata Bisporella citrina Bjerkandera adusta Boidinia propinqua Bolbitius vitellinus Suillellus (Boletus) amygdalinus Rubroboleus (Boletus) eastwoodiae Boletus edulis Boletus fibrillosus Botryobasidium longisporum Botryobasidium sp. Botryobasidium vagum Bovista dermoxantha Bovista pila Bovista plumbea Bulgaria inquinans Byssocorticium californicum -
Fruiting Body Form, Not Nutritional Mode, Is the Major Driver of Diversification in Mushroom-Forming Fungi
Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi Marisol Sánchez-Garcíaa,b, Martin Rybergc, Faheema Kalsoom Khanc, Torda Vargad, László G. Nagyd, and David S. Hibbetta,1 aBiology Department, Clark University, Worcester, MA 01610; bUppsala Biocentre, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, SE-75005 Uppsala, Sweden; cDepartment of Organismal Biology, Evolutionary Biology Centre, Uppsala University, 752 36 Uppsala, Sweden; and dSynthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Center, 6726 Szeged, Hungary Edited by David M. Hillis, The University of Texas at Austin, Austin, TX, and approved October 16, 2020 (received for review December 22, 2019) With ∼36,000 described species, Agaricomycetes are among the and the evolution of enclosed spore-bearing structures. It has most successful groups of Fungi. Agaricomycetes display great di- been hypothesized that the loss of ballistospory is irreversible versity in fruiting body forms and nutritional modes. Most have because it involves a complex suite of anatomical features gen- pileate-stipitate fruiting bodies (with a cap and stalk), but the erating a “surface tension catapult” (8, 11). The effect of gas- group also contains crust-like resupinate fungi, polypores, coral teroid fruiting body forms on diversification rates has been fungi, and gasteroid forms (e.g., puffballs and stinkhorns). Some assessed in Sclerodermatineae, Boletales, Phallomycetidae, and Agaricomycetes enter into ectomycorrhizal symbioses with plants, Lycoperdaceae, where it was found that lineages with this type of while others are decayers (saprotrophs) or pathogens. We constructed morphology have diversified at higher rates than nongasteroid a megaphylogeny of 8,400 species and used it to test the following lineages (12). -
Agaricus Blazei Or Royal Sun Agaric, Inonotus Obliquus Or Chaga, and Ganoderma Lucidum Or Reishi
VOLUME 56: 4 July-August 2016 www.namyco.org Spaces Still Available for NAMA 2016 SHENANDOAH FORAY! There are still slots available for NAMA’s 2016 foray this September 8-11 in Front Royal, VA. Don’t miss out on this unique foray -- sign up today!* Exciting partnership with Shenandoah National Park. We are thrilled that many of this year’s field trips will be in Shenandoah National Park, authorized under a special research permit and “Bioblitz” designation. This gives NAMA members a unique opportunity to pick mushrooms in the park and contribute to a better understanding of the park’s mycoflora. We really hope you’ll join in on this project. Fantastic Faculty. As you know, field trips are only a part of the foray: at any given point on Friday and Saturday there also will be multiple presentations and workshops running. Speakers and workshop leaders will include: • Denis Benjamin • Susan Hopkins • Gary Lincoff • Alan and Arleen Bessette • Mark Jones • Brian Looney • Walt Sturgeon • Catherine Aime • Jay Justice • Shannon Nix • Rod Tulloss • Michael Castellano • Ryan Kepler • Conrad Schoch • Debbie Viess • Tradd Cotter • Patrick Leacock • Ann and Rob Simpson • Rytas Vilgalys • Roy Halling • James Lendemer • Dorothy Smullen You can read more about the faculty, workshops and walks (and see the great foray tshirt!) on the NAMA web- site (http://namyco.org/nama_shenandoah_foray.php). *To register go to http://mms.namyco.org/members/evr/ reg_event.php?orgcode=NAMA&evid=7001739. Great Location. The foray location is just 15 minutes away from Front Royal, VA, the northern gateway to Shenan- doah National Park. -
Universidade Federal Do Paraná Francisco Menino Destéfanis Vítola Antileishmanial Biocompounds Screening on Submerged Mycelia
UNIVERSIDADE FEDERAL DO PARANÁ FRANCISCO MENINO DESTÉFANIS VÍTOLA ANTILEISHMANIAL BIOCOMPOUNDS SCREENING ON SUBMERGED MYCELIAL CULTURE BROTHS OF TWELVE MACROMYCETE SPECIES CURITIBA 2008 FRANCISCO MENINO DESTÉFANIS VÍTOLA ANTILEISHMANIAL BIOCOMPOUNDS SCREENING ON SUBMERGED MYCELIAL CULTURE BROTHS OF TWELVE MACROMYCETE SPECIES Dissertation presented as a partial requisite for the obtention of a master’s degree in Bioprocesses Engineering and Biotechnology from the Bioprocesses Engineering and Biotechnology post-Graduation Program, Technology Sector, Federal University of Parana. Advisors: Prof. Dr. Carlos Ricardo Soccol Prof. Dr. Vanete Thomaz Soccol CURITIBA 2008 ACKNOWLEDGMENTS I would like to express my gratefulness for: My supervisors, Dr. Carlos Ricardo Soccol and Dr. Vanete Thomaz Soccol, for all the inspiration and patience. I am very thankful for this opportunity to take part and contribute on such a decent scientific field as that covered by this dissertation, mainly concerned with the application of biotechnology for noble purposes as solving health problems and improving quality of life. Dr. Jean Luc Tholozan and Dr. Jean Lorquin– Université de Provence et de la Mediterranée, for their efforts on international cooperation for science development. The expert mycologist, André de Meijer (SPVS), who gently colaborated with this work, identifying all the assessed mushrooms species. Dr. Luiz Cláudio Fernandes – physiology department – UFPR, for collaboration with instruction, equipments, and material for the radiolabelled thymidine methodology. Dr. Stênio Fragoso – IBMP, for collaborating with the scintillator equipment. Dr. Sílvio Zanatta – neurophysiology laboratory – UFPR, for helping with laboratory material and equipment. Marcelo Fernandes, that has been my colleague on mushroom research for the last years, for help with mushrooms collection, isolation and maintenance. -
Forest Fungi in Ireland
FOREST FUNGI IN IRELAND PAUL DOWDING and LOUIS SMITH COFORD, National Council for Forest Research and Development Arena House Arena Road Sandyford Dublin 18 Ireland Tel: + 353 1 2130725 Fax: + 353 1 2130611 © COFORD 2008 First published in 2008 by COFORD, National Council for Forest Research and Development, Dublin, Ireland. All rights reserved. No part of this publication may be reproduced, or stored in a retrieval system or transmitted in any form or by any means, electronic, electrostatic, magnetic tape, mechanical, photocopying recording or otherwise, without prior permission in writing from COFORD. All photographs and illustrations are the copyright of the authors unless otherwise indicated. ISBN 1 902696 62 X Title: Forest fungi in Ireland. Authors: Paul Dowding and Louis Smith Citation: Dowding, P. and Smith, L. 2008. Forest fungi in Ireland. COFORD, Dublin. The views and opinions expressed in this publication belong to the authors alone and do not necessarily reflect those of COFORD. i CONTENTS Foreword..................................................................................................................v Réamhfhocal...........................................................................................................vi Preface ....................................................................................................................vii Réamhrá................................................................................................................viii Acknowledgements...............................................................................................ix -
Herbariet Publ 2010-2019 (PDF)
Publikationer 2019 Amorim, B. S., Vasconcelos, T. N., Souza, G., Alves, M., Antonelli, A., & Lucas, E. (2019). Advanced understanding of phylogenetic relationships, morphological evolution and biogeographic history of the mega-diverse plant genus Myrcia and its relatives (Myrtaceae: Myrteae). Molecular phylogenetics and evolution, 138, 65-88. Anderson, C. (2019). Hiraea costaricensis and H. polyantha, Two New Species Of Malpighiaceae, and circumscription of H. quapara and H. smilacina. Edinburgh Journal of Botany, 1-16. Athanasiadis, A. (2019). Carlskottsbergia antarctica (Hooker fil. & Harv.) gen. & comb. nov., with a re-assessment of Synarthrophyton (Mesophyllaceae, Corallinales, Rhodophyta). Nova Hedwigia, 108(3-4), 291-320. Athanasiadis, A. (2019). Amphithallia, a genus with four-celled carpogonial branches and connecting filaments in the Corallinales (Rhodophyta). Marine Biology Research, 15(1), 13-25. Bandini, D., Oertel, B., Moreau, P. A., Thines, M., & Ploch, S. (2019). Three new hygrophilous species of Inocybe, subgenus Inocybe. Mycological Progress, 18(9), 1101-1119. Baranow, P., & Kolanowska, M. (2019, October). Sertifera hirtziana (Orchidaceae, Sobralieae), a new species from southeastern Ecuador. In Annales Botanici Fennici (Vol. 56, No. 4-6, pp. 205-209). Barboza, G. E., García, C. C., González, S. L., Scaldaferro, M., & Reyes, X. (2019). Four new species of Capsicum (Solanaceae) from the tropical Andes and an update on the phylogeny of the genus. PloS one, 14(1), e0209792. Barrett, C. F., McKain, M. R., Sinn, B. T., Ge, X. J., Zhang, Y., Antonelli, A., & Bacon, C. D. (2019). Ancient polyploidy and genome evolution in palms. Genome biology and evolution, 11(5), 1501-1511. Bernal, R., Bacon, C. D., Balslev, H., Hoorn, C., Bourlat, S. -
Taxons BW Fin 2013
Liste des 1863 taxons en Brabant Wallon au 31/12/2013 (1298 basidios, 436 ascos, 108 myxos et 21 autres) [1757 taxons au 31/12/2012, donc 106 nouveaux taxons] Remarque : Le nombre derrière le nom du taxon correspond au nombre de récoltes. Ascomycètes Acanthophiobolus helicosporus : 1 Cheilymenia granulata : 2 Acrospermum compressum : 4 Cheilymenia oligotricha : 6 Albotricha acutipila : 2 Cheilymenia raripila : 1 Aleuria aurantia : 31 Cheilymenia rubra : 1 Aleuria bicucullata : 1 Cheilymenia theleboloides : 2 Aleuria cestrica : 1 Chlorociboria aeruginascens : 3 Allantoporthe decedens : 2 Chlorosplenium viridulum : 4 Amphiporthe leiphaemia : 1 Choiromyces meandriformis : 1 Anthostomella rubicola : 2 Ciboria amentacea : 9 Anthostomella tomicoides : 2 Ciboria batschiana : 8 Anthracobia humillima : 1 Ciboria caucus : 15 Anthracobia macrocystis : 3 Ciboria coryli : 2 Anthracobia maurilabra : 1 Ciboria rufofusca : 1 Anthracobia melaloma : 3 Cistella grevillei : 1 Anthracobia nitida : 1 Cladobotryum dendroides : 1 Apiognomonia errabunda : 1 Claussenomyces atrovirens : 1 Apiognomonia hystrix : 4 Claviceps microcephala : 1 Aporhytisma urticae : 1 Claviceps purpurea : 2 Arachnopeziza aurata : 1 Clavidisculum caricis : 1 Arachnopeziza aurelia : 1 Coleroa robertiani : 1 Arthrinium sporophleum : 1 Colletotrichum dematium : 1 Arthrobotrys oligospora : 3 Colletotrichum trichellum : 2 Ascobolus albidus : 16 Colpoma quercinum : 1 Ascobolus brassicae : 4 Coniochaeta ligniaria : 1 Ascobolus carbonarius : 5 Coprotus disculus : 1 Ascobolus crenulatus : 11