Chaperone-Assisted Mitotic Actin Remodeling by BAG3 and HSPB8 Involves the Deacetylase HDAC6 and Its Substrate Cortactin
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Provided for Non-Commercial Research and Educational Use Only. Not for Reproduction, Distribution Or Commercial Use
Provided for non-commercial research and educational use only. Not for reproduction, distribution or commercial use. This chapter was originally published in the Comprehensive Biophysics, the copy attached is provided by Elsevier for the author’s benefit and for the benefit of the author’s institution, for non-commercial research and educational use. This includes without limitation use in instruction at your institution, distribution to specific colleagues, and providing a copy to your institution’s administrator. All other uses, reproduction and distribution, including without limitation commercial reprints, selling or licensing copies or access, or posting on open internet sites, your personal or institution’s website or repository, are prohibited. For exceptions, permission may be sought for such use through Elsevier’s permissions site at: http://www.elsevier.com/locate/permissionusematerial From D.N. Robinson, Y.-S. Kee, T. Luo and A. Surcel, Understanding How Dividing Cells Change Shape. In: Edward H. Egelman, editor: Comprehensive Biophysics, Vol 7, Cell Biophysics, Denis Wirtz. Oxford: Academic Press, 2012. pp. 48-72. ISBN: 978-0-12-374920-8 © Copyright 2012 Elsevier B.V. Academic Press. Author's personal copy 7.5 Understanding How Dividing Cells Change Shape DN Robinson, Y-S Kee, T Luo, and A Surcel, Johns Hopkins University, Baltimore, MD, USA r 2012 Elsevier B.V. All rights reserved. 7.5.1 Introduction 49 7.5.2 Physical Parameters 49 7.5.2.1 Membrane Surface Area and Membrane Remodeling 50 7.5.2.2 Cortical Tension and Cell Surface Curvature 50 7.5.3 The Mechanical Parts List 51 7.5.4 Mechanical Features of the Cortical Cytoskeletal Network 54 7.5.5 Dissecting Mechanics Across Variable Timescales and Length Scales 55 7.5.6 Mechanical Properties of Cytokinesis: Active vs. -
Atlas Antibodies in Breast Cancer Research Table of Contents
ATLAS ANTIBODIES IN BREAST CANCER RESEARCH TABLE OF CONTENTS The Human Protein Atlas, Triple A Polyclonals and PrecisA Monoclonals (4-5) Clinical markers (6) Antibodies used in breast cancer research (7-13) Antibodies against MammaPrint and other gene expression test proteins (14-16) Antibodies identified in the Human Protein Atlas (17-14) Finding cancer biomarkers, as exemplified by RBM3, granulin and anillin (19-22) Co-Development program (23) Contact (24) Page 2 (24) Page 3 (24) The Human Protein Atlas: a map of the Human Proteome The Human Protein Atlas (HPA) is a The Human Protein Atlas consortium cell types. All the IHC images for Swedish-based program initiated in is mainly funded by the Knut and Alice the normal tissue have undergone 2003 with the aim to map all the human Wallenberg Foundation. pathology-based annotation of proteins in cells, tissues and organs expression levels. using integration of various omics The Human Protein Atlas consists of technologies, including antibody- six separate parts, each focusing on References based imaging, mass spectrometry- a particular aspect of the genome- 1. Sjöstedt E, et al. (2020) An atlas of the based proteomics, transcriptomics wide analysis of the human proteins: protein-coding genes in the human, pig, and and systems biology. mouse brain. Science 367(6482) 2. Thul PJ, et al. (2017) A subcellular map of • The Tissue Atlas shows the the human proteome. Science. 356(6340): All the data in the knowledge resource distribution of proteins across all eaal3321 is open access to allow scientists both major tissues and organs in the 3. -
Mitotic Rounding Alters Cell Geometry to Ensure Efficient Bipolar Spindle Formation
Please cite this article in press as: Lancaster et al., Mitotic Rounding Alters Cell Geometry to Ensure Efficient Bipolar Spindle Formation, Developmental Cell (2013), http://dx.doi.org/10.1016/j.devcel.2013.03.014 Developmental Cell Article Mitotic Rounding Alters Cell Geometry to Ensure Efficient Bipolar Spindle Formation Oscar M. Lancaster,1,6 Mae¨ l Le Berre,5,6 Andrea Dimitracopoulos,1,4 Daria Bonazzi,5 Ewa Zlotek-Zlotkiewicz,5 Remigio Picone,1,4 Thomas Duke,2,3 Matthieu Piel,5,* and Buzz Baum1,* 1MRC Laboratory for Molecular Cell Biology 2London Centre for Nanotechnology 3Department of Physics and Astronomy 4CoMPLEX University College London, Gower Street, London WC1E 6BT, UK 5Systems Biology of Cell Division and Cell Polarity, UMR 144 Institut Curie/CNRS, 26 rue d’Ulm, 75248 Paris Cedex 05, France 6These two authors contributed equally to this work *Correspondence: [email protected] (M.P.), [email protected] (B.B.) http://dx.doi.org/10.1016/j.devcel.2013.03.014 SUMMARY chromatid cohesion and the movement of sister chromatids to opposite cell poles. Accurate animal cell division requires precise coordi- Mitotic progression is also accompanied by profound changes nation of changes in the structure of the microtubule- in actin filament organization (Kunda and Baum, 2009) that are based spindle and the actin-based cell cortex. Here, triggered by the activation of Ect2, RhoA, and Myosin II (Cramer we use a series of perturbation experiments to and Mitchison, 1997; Maddox and Burridge, 2003; Matthews dissect the relative roles of actin, cortical mechanics, et al., 2012). In combination with osmotic swelling (Stewart and cell shape in spindle formation. -
Encapsulation of the Cytoskeleton: Towards Mimicking the Mechanics of a Cell
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HCC and Cancer Mutated Genes Summarized in the Literature Gene Symbol Gene Name References*
HCC and cancer mutated genes summarized in the literature Gene symbol Gene name References* A2M Alpha-2-macroglobulin (4) ABL1 c-abl oncogene 1, receptor tyrosine kinase (4,5,22) ACBD7 Acyl-Coenzyme A binding domain containing 7 (23) ACTL6A Actin-like 6A (4,5) ACTL6B Actin-like 6B (4) ACVR1B Activin A receptor, type IB (21,22) ACVR2A Activin A receptor, type IIA (4,21) ADAM10 ADAM metallopeptidase domain 10 (5) ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 (4) ADCY2 Adenylate cyclase 2 (brain) (26) AJUBA Ajuba LIM protein (21) AKAP9 A kinase (PRKA) anchor protein (yotiao) 9 (4) Akt AKT serine/threonine kinase (28) AKT1 v-akt murine thymoma viral oncogene homolog 1 (5,21,22) AKT2 v-akt murine thymoma viral oncogene homolog 2 (4) ALB Albumin (4) ALK Anaplastic lymphoma receptor tyrosine kinase (22) AMPH Amphiphysin (24) ANK3 Ankyrin 3, node of Ranvier (ankyrin G) (4) ANKRD12 Ankyrin repeat domain 12 (4) ANO1 Anoctamin 1, calcium activated chloride channel (4) APC Adenomatous polyposis coli (4,5,21,22,25,28) APOB Apolipoprotein B [including Ag(x) antigen] (4) AR Androgen receptor (5,21-23) ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 (4) ARHGAP35 Rho GTPase activating protein 35 (21) ARID1A AT rich interactive domain 1A (SWI-like) (4,5,21,22,24,25,27,28) ARID1B AT rich interactive domain 1B (SWI1-like) (4,5,22) ARID2 AT rich interactive domain 2 (ARID, RFX-like) (4,5,22,24,25,27,28) ARID4A AT rich interactive domain 4A (RBP1-like) (28) ARID5B AT rich interactive domain 5B (MRF1-like) (21) ASPM Asp (abnormal -
A Glance on the Role of Actin in Osteogenic and Adipogenic
Khan et al. Stem Cell Research & Therapy (2020) 11:283 https://doi.org/10.1186/s13287-020-01789-2 REVIEW Open Access A glance on the role of actin in osteogenic and adipogenic differentiation of mesenchymal stem cells Asmat Ullah Khan† , Rongmei Qu† , Tingyu Fan , Jun Ouyang* and Jingxing Dai* Abstract Mesenchymal stem cells (MSCs) have the capacity to differentiate into multiple lineages including osteogenic and adipogenic lineages. An increasing number of studies have indicated that lineage commitment by MSCs is influenced by actin remodeling. Moreover, actin has roles in determining cell shape, nuclear shape, cell spreading, and cell stiffness, which eventually affect cell differentiation. Osteogenic differentiation is promoted in MSCs that exhibit a large spreading area, increased matrix stiffness, higher levels of actin polymerization, and higher density of stress fibers, whereas adipogenic differentiation is prevalent in MSCs with disrupted actin networks. In addition, the mechanical properties of F-actin empower cells to sense and transduce mechanical stimuli, which are also reported to influence differentiation. Various biomaterials, mechanical, and chemical interventions along with pathogen- induced actin alteration in the form of polymerization and depolymerization in MSC differentiation were studied recently. This review will cover the role of actin and its modifications through the use of different methods in inducing osteogenic and adipogenic differentiation. Keywords: Mesenchymal stem cells (MSCs), Actin, Osteogenesis, Adipogenesis cytoskeleton, Osteogenic differentiation, Adipogenic differentiation, Cytoskeleton Introduction however, this review will focus specifically on the role of Stem cells exhibit a great potential for use in tissue en- actin. gineering because of their regenerative capacity in many Actin is a globular protein with a molecular weight of tissues, including nervous tissue, muscle tissue, adipose approximately 42 kDa and consists of four structural do- tissue, cartilage tissue, and bone tissue. -
Anisotropic Cellular Mechanoresponse for Radial Size Maintenance Of
bioRxiv preprint doi: https://doi.org/10.1101/172916; this version posted November 15, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Anisotropic Cellular Mechanoresponse for 2 Radial Size Maintenance of Developing Epithelial Tubes 3 4 Tsuyoshi Hirashima*1 and Taiji Adachi2 5 1. Department of Pathology and Biology of Diseases, Graduate School of Medicine, 6 Kyoto University 7 2. Institute for Frontier Life and Medical Sciences, Kyoto University 8 9 10 Correspondence to: 11 Tsuyoshi Hirashima, Ph.D. 12 Department of Pathology and Biology of Diseases, Graduate School of Medicine, Kyoto 13 University, Yoshida-konoe-cho, Sakyo-ku, Kyoto 606-8315, Japan. 14 Tel/Fax: +81-75-753-9450 15 E-mail: [email protected] 16 1 bioRxiv preprint doi: https://doi.org/10.1101/172916; this version posted November 15, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 17 Abstract 18 Cellular behaviors responding to mechanical forces control the size of multicellular tissues as 19 demonstrated in isotropic size maintenance of developing tissues. However, how 20 mechanoresponse systems work to maintain anisotropic tissue size including tube radial size 21 remains unknown. Here we reveal the system underlying radial size maintenance of the 22 murine epididymal tubule by combining quantitative imaging, mathematical modeling, and 23 mechanical perturbations. -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Ikkγ Protein Is a Target of BAG3 Regulatory Activity in Human Tumor Growth
IKKγ protein is a target of BAG3 regulatory activity in human tumor growth Massimo Ammirantea,b,1, Alessandra Rosatib,c,1, Claudio Arrac,d, Anna Basileb,c, Antonia Falcob,c, Michela Festab,c, Maria Pascaleb,c, Morena d’Aveniab,c, Liberato Marzullob,c, Maria Antonietta Belisariob, Margot De Marcob,c, Antonio Barbierid, Aldo Giudiced, Gennaro Chiappettae, Emilia Vuttarielloe, Mario Monacoe, Patrizia Bonellid, Gaetano Salvatoref, Maria Di Benedettof, Satish L. Deshmaneg, Kamel Khalilig, Maria Caterina Turcob,c,2, and Arturo Leoneb aLaboratory of Gene Regulation and Signal Transduction, Department of Pharmacology and Cancer Center, School of Medicine, University of California, San Diego, La Jolla, CA 92093-0723; bDepartment of Pharmaceutical Sciences (DiFarma), University of Salerno, 84084 Fisciano, Italy; cBioUniverSA S.R.L., 84084 Fisciano, Italy; dAnimal Facility and eFunctional Genomic Unit National Cancer Institute, “Tumor Institute Fond. Pascale,” 80131 Naples, Italy; fPathological Anatomy, Federico II University, 80131 Naples, Italy; and gCenter For Neurovirology, Department of Neuroscience, Temple University, Philadelphia PA 19122 Edited* by Michael Karin, School of Medicine, University of California, La Jolla, CA, and approved March 17, 2010 (received for review July 10, 2009) BAG3, a member of the BAG family of heat shock protein (HSP) 70 leukemia results in a dramatic increase of basal as well as drug- cochaperones, is expressed in response to stressful stimuli in a number induced apoptosis (17, 18). Furthermore, BAG3 is overexpressed in of normal cell types and constitutively in a variety of tumors, including thyroid carcinomas, where higher levels of expression are reached in pancreas carcinomas, lymphocytic and myeloblastic leukemias, and anaplastic tumors compared with well-differentiated forms. -
Role and Regulation of the Actin-Regulatory Protein Hs1 in Tcr Signaling
University of Pennsylvania ScholarlyCommons Publicly Accessible Penn Dissertations Fall 2009 Role and Regulation of the Actin-Regulatory Protein Hs1 in Tcr Signaling Esteban Carrizosa University of Pennsylvania, [email protected] Follow this and additional works at: https://repository.upenn.edu/edissertations Part of the Cell Biology Commons, and the Immunology and Infectious Disease Commons Recommended Citation Carrizosa, Esteban, "Role and Regulation of the Actin-Regulatory Protein Hs1 in Tcr Signaling" (2009). Publicly Accessible Penn Dissertations. 91. https://repository.upenn.edu/edissertations/91 This paper is posted at ScholarlyCommons. https://repository.upenn.edu/edissertations/91 For more information, please contact [email protected]. Role and Regulation of the Actin-Regulatory Protein Hs1 in Tcr Signaling Abstract Numerous aspects of T cell function, including TCR signaling, migration, and execution of effector functions, depend on the actin cytoskeleton. Cytoskeletal rearrangements are driven by the action of actin-regulatory proteins, which promote or antagonize the assembly of actin filaments in esponser to external cues. In this work, we have examined the regulation and function of HS1, a poorly-understood actin regulatory protein, in T cells. This protein, which becomes tyrosine phosphorylated upon T cell activation, is thought to function primarily by stabilizing existing branched actin filaments. Loss of HS1 results in unstable actin responses upon TCR engagement and defective Ca2+ responses, leading to poor activation of the IL2 promoter. TCR engagement leads to phosphorylation of HS1 at Tyr 378 and Tyr 397, creating binding sites for SH2 domain-containing proteins, including Vav1 and Itk. Phosphorylation at these residues is required for Itk-dependent recruitment of HS1 to the IS, Vav1 IS localization, and HS1-dependent actin reorganization and IL2 production. -
Mitotic Cell Rounding Accelerates Epithelial Invagination
LETTER doi:10.1038/nature11792 Mitotic cell rounding accelerates epithelial invagination Takefumi Kondo1 & Shigeo Hayashi1,2 Mitotic cells assume a spherical shape by increasing their surface with apical depression ‘internalized cell rounding’, to distinguish itfrom tension and osmotic pressure by extensively reorganizing their canonical surface mitosis (surface cell rounding). interphase actin cytoskeleton into a cortical meshwork and their To determine whether cell rounding is required for invagination, we microtubules into the mitotic spindle1,2. Mitotic entry is known to analysed zygotic mutants of the cell-cycle gene Cyclin A (CycA), which interfere with tissue morphogenetic events that require cell-shape fail to enter mitosis 16 (ref. 17), and double parkeda3 (dupa3), which changes controlled by the interphase cytoskeleton, such as apical show a prolonged S phase 16 and delayed entry into mitosis 16 constriction3–5. However, here we show that mitosis plays an active (ref. 18). Tracheal invagination was initiated normally in the CycA role in the epithelial invagination of the Drosophila melanogaster and dupa3 mutants, but proceeded more slowly than in controls tracheal placode. Invagination begins with a slow phase under the (Fig. 2a, d, Supplementary Fig. 2 and Supplementary Video 3), indi- control of epidermal growth factor receptor (EGFR) signalling; in cating that entry into mitosis 16 is required for proper timing of the fast this process, the central apically constricted cells, which are sur- phase. rounded by intercalating cells6,7, form a shallow pit. This slow Although delayed, the accelerated invagination in the CycA or dupa3 phase is followed by a fast phase, in which the pit is rapidly mutants eventually occurred, allowing the formation of tube struc- depressed, accompanied by mitotic entry, which leads to the inter- tures (Fig. -
BAG3 and SYNPO (Synaptopodin) Facilitate Phospho-MAPT/Tau Degradation Via Autophagy In
ManuscriptbioRxiv - with preprint full author doi: https://doi.org/10.1101/518597 details ; this version posted January 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. BAG3 and SYNPO (synaptopodin) facilitate phospho-MAPT/Tau degradation via autophagy in neuronal processes Changyi Ji1, #, Maoping Tang1, #, Claudia Zeidler2, Jörg Höhfeld2 and Gail VW Johnson1, * 1 Department of Anesthesiology, University of Rochester, 601 Elmwood Ave, Box 604, Rochester, NY 14642, USA; 2 Institute for Cell Biology, University of Bonn, Ulrich-Haberland- Str. 61a, D-53121 Bonn, Germany # Contributed equally to this work *Corresponding Author: Gail V.W. Johnson: [email protected] Voice: +1-585-276-3740; ORCID: 0000-0003-3464-0404 Emails: Jörg Höhfeld – [email protected] Changyi Ji – [email protected] Maoping Tang – [email protected] Claudia Zeidler – [email protected] Key words: autophagosome, postsynaptic density, PPxY domain, SQSTM1/p62, synapse, WW domain Disclosure of Interest: The authors report no conflict of interest. Funding: This work was supported by NIH grant NS098769 to G.V.W.J. and DFG grant HO 1518/8-2 to J.H. 1 bioRxiv preprint doi: https://doi.org/10.1101/518597; this version posted January 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license.