Matrix Assisted Laser Desorption Ionization Time of Flight Mass Spectrometry “MALDI-TOF MS” Has Not Been Widely Applied Due to the Saturated Nature of Polyolefins
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An Introduction to Isotopic Calculations John M
An Introduction to Isotopic Calculations John M. Hayes ([email protected]) Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA, 30 September 2004 Abstract. These notes provide an introduction to: termed isotope effects. As a result of such effects, the • Methods for the expression of isotopic abundances, natural abundances of the stable isotopes of practically • Isotopic mass balances, and all elements involved in low-temperature geochemical • Isotope effects and their consequences in open and (< 200°C) and biological processes are not precisely con- closed systems. stant. Taking carbon as an example, the range of interest is roughly 0.00998 ≤ 13F ≤ 0.01121. Within that range, Notation. Absolute abundances of isotopes are com- differences as small as 0.00001 can provide information monly reported in terms of atom percent. For example, about the source of the carbon and about processes in 13 13 12 13 atom percent C = [ C/( C + C)]100 (1) which the carbon has participated. A closely related term is the fractional abundance The delta notation. Because the interesting isotopic 13 13 fractional abundance of C ≡ F differences between natural samples usually occur at and 13F = 13C/(12C + 13C) (2) beyond the third significant figure of the isotope ratio, it has become conventional to express isotopic abundances These variables deserve attention because they provide using a differential notation. To provide a concrete the only basis for perfectly accurate mass balances. example, it is far easier to say – and to remember – that Isotope ratios are also measures of the absolute abun- the isotope ratios of samples A and B differ by one part dance of isotopes; they are usually arranged so that the per thousand than to say that sample A has 0.3663 %15N more abundant isotope appears in the denominator and sample B has 0.3659 %15N. -
Mass Spectrometry: Quadrupole Mass Filter
Advanced Lab, Jan. 2008 Mass Spectrometry: Quadrupole Mass Filter The mass spectrometer is essentially an instrument which can be used to measure the mass, or more correctly the mass/charge ratio, of ionized atoms or other electrically charged particles. Mass spectrometers are now used in physics, geology, chemistry, biology and medicine to determine compositions, to measure isotopic ratios, for detecting leaks in vacuum systems, and in homeland security. Mass Spectrometer Designs The first mass spectrographs were invented almost 100 years ago, by A.J. Dempster, F.W. Aston and others, and have therefore been in continuous development over a very long period. However the principle of using electric and magnetic fields to accelerate and establish the trajectories of ions inside the spectrometer according to their mass/charge ratio is common to all the different designs. The following description of Dempster’s original mass spectrograph is a simple illustration of these physical principles: The magnetic sector spectrograph PUMP F DD S S3 1 r S2 Fig. 1: Dempster’s Mass Spectrograph (1918). Atoms/molecules are first ionized by electrons emitted from the hot filament (F) and then accelerated towards the entrance slit (S1). The ions then follow a semicircular trajectory established by the Lorentz force in a uniform magnetic field. The radius of the trajectory, r, is defined by three slits (S1, S2, and S3). Ions with this selected trajectory are then detected by the detector D. How the magnetic sector mass spectrograph works: Equating the Lorentz force with the centripetal force gives: qvB = mv2/r (1) where q is the charge on the ion (usually +e), B the magnetic field, m is the mass of the ion and r the radius of the ion trajectory. -
Infection Control in Dentistry: How to Asepsis Photographic Mirrors?
Infection control in dentistry: how to asepsis photographic mirrors? Amanda Osório Ayres de Freitas* Mariana Marquezan* Giselle Naback Lemes Vilani* Rodrigo César Santiago* Luiz Felipe de Miranda Costa* Sandra Regina Torres** Abstract: The aim of this study was to evaluate the efficacy of six different methods of disinfection and sterilization of intraoral photographic mirrors through microbiological testing and to analysis their potential harm to mirrors’ surface. Fourteen occlusal mirrors were divided into seven groups. Group 1 comprised two mirrors as received from manufacturer. The other six groups comprised mirrors disinfected/sterilized by autoclave, immersion in enzymatic detergent, and friction with chlorhexidine detergent, chlorhexidine wipes, common detergent and 70% ethylic alcohol. Microbiological and quality surface analyses were performed. Sterilization in autoclave was microbiologic effective, but caused damage to the mirror surface. Chlorhexidine (in wipes or detergent) and liquid soap were effective disinfectant agents for photographic mirrors decontamination, without harmful effect on its surface. Enzymatic detergent immersion and friction with 70% ethylic alcohol were not effective as disinfectant agents for photographic mirrors decontamination. According to the results, the more effective and safe methods for photographic mirrors disinfection were friction with chlorhexidine wipes or detergent, as well as liquid soap. Results, the most efficacious methods for photographic mirrors disinfection were friction with chlorhexidine wipes and detergent, as well as common detergent. Descriptors: Dental Instruments; Decontamination; Microbiology; Surface Properties. *Doutoranda em Odontologia na Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brasil **Pósdoutora em odontologia pela University of Washington (UW), Seattle, WA, Estados Unidos ISSN 22365843 │ 93 Introduction Dental photography is an important tool for diagnostic and treatment planning, and it’s also a registration of the patient’s condition before and after treatment. -
POLYMER STRUCTURE and CHARACTERIZATION Professor
POLYMER STRUCTURE AND CHARACTERIZATION Professor John A. Nairn Fall 2007 TABLE OF CONTENTS 1 INTRODUCTION 1 1.1 Definitions of Terms . 2 1.2 Course Goals . 5 2 POLYMER MOLECULAR WEIGHT 7 2.1 Introduction . 7 2.2 Number Average Molecular Weight . 9 2.3 Weight Average Molecular Weight . 10 2.4 Other Average Molecular Weights . 10 2.5 A Distribution of Molecular Weights . 11 2.6 Most Probable Molecular Weight Distribution . 12 3 MOLECULAR CONFORMATIONS 21 3.1 Introduction . 21 3.2 Nomenclature . 23 3.3 Property Calculation . 25 3.4 Freely-Jointed Chain . 27 3.4.1 Freely-Jointed Chain Analysis . 28 3.4.2 Comment on Freely-Jointed Chain . 34 3.5 Equivalent Freely Jointed Chain . 37 3.6 Vector Analysis of Polymer Conformations . 38 3.7 Freely-Rotating Chain . 41 3.8 Hindered Rotating Chain . 43 3.9 More Realistic Analysis . 45 3.10 Theta (Θ) Temperature . 47 3.11 Rotational Isomeric State Model . 48 4 RUBBER ELASTICITY 57 4.1 Introduction . 57 4.2 Historical Observations . 57 4.3 Thermodynamics . 60 4.4 Mechanical Properties . 62 4.5 Making Elastomers . 68 4.5.1 Diene Elastomers . 68 0 4.5.2 Nondiene Elastomers . 69 4.5.3 Thermoplastic Elastomers . 70 5 AMORPHOUS POLYMERS 73 5.1 Introduction . 73 5.2 The Glass Transition . 73 5.3 Free Volume Theory . 73 5.4 Physical Aging . 73 6 SEMICRYSTALLINE POLYMERS 75 6.1 Introduction . 75 6.2 Degree of Crystallization . 75 6.3 Structures . 75 Chapter 1 INTRODUCTION The topic of polymer structure and characterization covers molecular structure of polymer molecules, the arrangement of polymer molecules within a bulk polymer material, and techniques used to give information about structure or properties of polymers. -
ADVANCED SPECTROMETER Introduction
ADVANCED SPECTROMETER Introduction In principle, a spectrometer is the simplest of scientific very sensitive detection and precise measurement, a real instruments. Bend a beam of light with a prism or diffraction spectrometer is a bit more complicated. As shown in Figure grating. If the beam is composed of more than one color of 1, a spectrometer consists of three basic components; a light, a spectrum is formed, since the various colors are collimator, a diffracting element, and a telescope. refracted or diffracted to different angles. Carefully measure The light to be analyzed enters the collimator through a the angle to which each color of light is bent. The result is a narrow slit positioned at the focal point of the collimator spectral "fingerprint," which carries a wealth of information lens. The light leaving the collimator is therefore a thin, about the substance from which the light emanates. parallel beam, which ensures that all the light from the slit In most cases, substances must be hot if they are to emit strikes the diffracting element at the same angle of inci- light. But a spectrometer can also be used to investigate cold dence. This is necessary if a sharp image is to be formed. substances. Pass white light, which contains all the colors of The diffracting element bends the beam of light. If the beam the visible spectrum, through a cool gas. The result is an is composed of many different colors, each color is dif- absorption spectrum. All the colors of the visible spectrum fracted to a different angle. are seen, except for certain colors that are absorbed by the gas. -
Polymers Division
National Institute of Standards and Technology Technology Administration U.S. Department of MSEL Commerce NISTIR 6796 FY 2001 PROGRAMS September 2001 AND ACCOMPLISHMENTS POLYMERS DIVISION Advance measurement methods to characterize microstructure failure in composites This optical image is a planar array of glass fibers embedded in epoxy resin matrix deformed under tension. The arrays are used to investigate the failure initiation in fibrous composites. In the optical image, the fibers are spaced (30 to 45) mm apart and the dark regions along each fiber are cracks that extend into the surrounding polymer matrix. The light blue regions that connect the fiber breaks show high deformation shear bands that emanate from the tips of the matrix cracks. National Institute of Standards and Technology Karen H. Brown, MATERIALS Acting Director Technology SCIENCE AND Administration ENGINEERING U.S. Department of Commerce Donald L. Evans, Secretary LABORATORY T OF C EN OM M M T E R R FY 2001 PROGRAMS A C P E E D AND U N A I C T I E R D E S M ACCOMPLISHMENTS T A ATES OF POLYMERS DIVISION Eric J. Amis, Chief Bruno M. Fanconi, Deputy NISTIR 6796 September 2001 Table of Contents Executive Summary ............................................................................................................................................................. 1 Technical Highlights Mass Spectrometry of Polyethylene ......................................................................................................................... 4 Combinatorial Study of -
A Study of Rawitz's 'Inversion Staining' by ALEKSANDRA PRZEL^CKA
231 A Study of Rawitz's 'Inversion Staining' By ALEKSANDRA PRZEL^CKA {From the Cytological Laboratory, Department of Zoology, University Museum, Oxford, and the Nencki Institute, 3 Pasteur St., Warsaw 22; present address, Nencki Institute) SUMMAHY The Rawitz method involves mordanting with tannic acid and potassium antimony tartrate, and staining with basic fuchsine. The mordanting causes basic fuchsine to act as though it were an acid dye ('inversion staining'). A modification of the method is described in the present paper. This modification makes it possible to obtain the same results in a shorter time. The chief substances stained by Rawitz's method are phospholipids, certain pro- teins, and certain polysaccharides. Although the method cannot be regarded as a cytochemical test in the strict sense, yet it gives useful indications of chemical composition and in addition is valuable to the morphological cytologist as a technique for showing certain cytoplasmic inclusions (mitotic spindle, acrosome, mitochondria, 'Golgi apparatus' of certain cells). INTRODUCTION T is well known that the so-called 'Golgi apparatus' is extremely difficult to I reveal by any staining method. Baker, in the course of his investigation on this organelle in the epididymis of the mouse, found that it can be stained by basic fuchsin after a special mordanting process (1957). The method was taken from Rawitz (1895), who found that basic fuchsin, if mordanted with tannic acid and potassium antimony tartrate, loses the character of a dye for chro- matin and colours the cytoplasm instead. Rawitz called this effect 'inversion staining'. Since this technique, when applied to various kinds of cytological material, gave good selectivity in visualizing certain delicate cell structures, it seemed interesting to investigate the nature of the chemical compounds which are responsible for positive Rawitz staining. -
Good Practice Guide for Isotope Ratio Mass Spectrometry, FIRMS (2011)
Good Practice Guide for Isotope Ratio Mass Spectrometry Good Practice Guide for Isotope Ratio Mass Spectrometry First Edition 2011 Editors Dr Jim Carter, UK Vicki Barwick, UK Contributors Dr Jim Carter, UK Dr Claire Lock, UK Acknowledgements Prof Wolfram Meier-Augenstein, UK This Guide has been produced by Dr Helen Kemp, UK members of the Steering Group of the Forensic Isotope Ratio Mass Dr Sabine Schneiders, Germany Spectrometry (FIRMS) Network. Dr Libby Stern, USA Acknowledgement of an individual does not indicate their agreement with Dr Gerard van der Peijl, Netherlands this Guide in its entirety. Production of this Guide was funded in part by the UK National Measurement System. This publication should be cited as: First edition 2011 J. F. Carter and V. J. Barwick (Eds), Good practice guide for isotope ratio mass spectrometry, FIRMS (2011). ISBN 978-0-948926-31-0 ISBN 978-0-948926-31-0 Copyright © 2011 Copyright of this document is vested in the members of the FIRMS Network. IRMS Guide 1st Ed. 2011 Preface A few decades ago, mass spectrometry (by which I mean organic MS) was considered a “black art”. Its complex and highly expensive instruments were maintained and operated by a few dedicated technicians and its output understood by only a few academics. Despite, or because, of this the data produced were amongst the “gold standard” of analytical science. In recent years a revolution occurred and MS became an affordable, easy to use and routine technique in many laboratories. Although many (rightly) applaud this popularisation, as a consequence the “black art” has been replaced by a “black box”: SAMPLES GO IN → → RESULTS COME OUT The user often has little comprehension of what goes on “under the hood” and, when “things go wrong”, the inexperienced operator can be unaware of why (or even that) the results that come out do not reflect the sample that goes in. -
Beyond GPC Light Scattering for Absolute Polymer
J U N E 2 0 1 6 BEYOND GPC: USING LIGHT SCATTERING FOR ABSOLUTE POLYMER CHARACTERIZATION BEYOND GPC: USING LIGHT TOC SCATTERING FOR ABSOLUTE Table of contents POLYMER CHARACTERIZation Adding MALS Detection to GPC Overcoming Fear, Uncertainty, and Doubt in GPC: The Need for an Absolute Measurement of Molar Mass 04 Mark W. Spears, Jr. Characterizing Polymer Branching Principles of Detection and Characterization of Branching in Synthetic and Natural Polymers by MALS 11 Stepan Podzimek Analyzing Polymerization Processes Light-Scattering Techniques for Analyzing Polymerization Processes An interview with Judit E. Puskas 18 SEC–MALS vs. AF4–MALS Characterization of Styrene-Butadiene Rubbers by SEC–MALS and AF4–MALS 20 Stepan Podzimek The Most Interesting Man in Light Scattering. photo: © PeteBleyer.com We Call Him Dad. Dr. Philip Wyatt is the father of Multi-Angle Light delight them with unexpectedly attentive cus- Scattering (MALS) detection. Together with his tomer service. Check. After all, we don’t just want sons, Geof and Cliff, he leads his company to to sell our instruments, we want to help you do produce the industry’s most advanced instruments great work with them. Because at Wyatt Technol- by upholding two core premises: First, build top ogy, our family extends beyond our last name to quality instruments to serve scientists. Check. Then everyone who uses our products. For essential macromolecular and nanoparticle characterization—The Solution is Light™ © 2015 Wyatt Technology. All rights reserved. All trademarks and registered trademarks are properties of their respective holders. OVERCOMING FEAR, UNCERTAINTY, AND DOubT IN GPC: THE NEED FOR AN AbSOluTE MEASUREMENT OF MOLAR MASS Mark W. -
Eosin Staining
Science of H & E Andrew Lisowski, M.S., HTL (A.S.C.P.) 1 Hematoxylin and Eosin Staining “The desired end result of a tissue stained with hematoxylin and eosin is based upon what seems to be almost infinite factors. Pathologists have individual preferences for section thickness, intensities, and shades. The choice of which reagents to use must take into consideration: cost, method of staining, option of purchasing commercially-prepared or technician-prepared reagents, safety, administration policies, convenience, availability, quality, technical limitations, as well as personal preference.” Guidelines for Hematoxylin and Eosin Staining National Society for Histotechnology 2 Why Do We Stain? In order to deliver a medical diagnosis, tissues must be examined under a microscope. Once a tissue specimen has been processed by a histology lab and transferred onto a glass slide, it needs to be appropriately stained for microscopic evaluation. This is because unstained tissue lacks contrast: when viewed under the microscope, everything appears in uniform dull grey color. Unstained tissue H&E stained tissue 3 What Does "Staining" Do? . Contrasts different cells . Highlights particular features of interest . Illustrates different cell structures . Detects infiltrations or deposits in the tissue . Detect pathogens Superbly contrasted GI cells Placenta’s large blood H&E stain showing extensive vessels iron deposits There are different staining techniques to reveal different structures of the cell 4 What is H&E Staining? As its name suggests, H&E stain makes use of a combination of two dyes – hematoxylin and eosin. It is often termed as “routine staining” as it is the most common way of coloring otherwise transparent tissue specimen. -
Spectrum 100 Series User's Guide
MOLECULAR SPECTROSCOPY SPECTRUM 100 SERIES User’s Guide 2 . Spectrum 100 Series User’s Guide Release History Part Number Release Publication Date L1050021 A October 2005 Any comments about the documentation for this product should be addressed to: User Assistance PerkinElmer Ltd Chalfont Road Seer Green Beaconsfield Bucks HP9 2FX United Kingdom Or emailed to: [email protected] Notices The information contained in this document is subject to change without notice. Except as specifically set forth in its terms and conditions of sale, PerkinElmer makes no warranty of any kind with regard to this document, including, but not limited to, the implied warranties of merchantability and fitness for a particular purpose. PerkinElmer shall not be liable for errors contained herein for incidental consequential damages in connection with furnishing, performance or use of this material. Copyright Information This document contains proprietary information that is protected by copyright. All rights are reserved. No part of this publication may be reproduced in any form whatsoever or translated into any language without the prior, written permission of PerkinElmer, Inc. Copyright © 2005 PerkinElmer, Inc. Trademarks Registered names, trademarks, etc. used in this document, even when not specifically marked as such, are protected by law. PerkinElmer is a registered trademark of PerkinElmer, Inc. Spectrum, Spectrum 100, and Spectrum 100N are trademarks of PerkinElmer, Inc. Spectrum 100 Series User’s Guide . 3 Contents Contents............................................................................................... -
Theoretical Calculations for Electron Impact Ionization of Atoms and Molecules
Scholars' Mine Doctoral Dissertations Student Theses and Dissertations Fall 2017 Theoretical calculations for electron impact ionization of atoms and molecules Sadek Mohamed Fituri Amami Follow this and additional works at: https://scholarsmine.mst.edu/doctoral_dissertations Part of the Atomic, Molecular and Optical Physics Commons Department: Physics Recommended Citation Amami, Sadek Mohamed Fituri, "Theoretical calculations for electron impact ionization of atoms and molecules" (2017). Doctoral Dissertations. 2617. https://scholarsmine.mst.edu/doctoral_dissertations/2617 This thesis is brought to you by Scholars' Mine, a service of the Missouri S&T Library and Learning Resources. This work is protected by U. S. Copyright Law. Unauthorized use including reproduction for redistribution requires the permission of the copyright holder. For more information, please contact [email protected]. THEORETICAL CALCULATIONS FOR ELECTRON IMPACT IONIZATION OF ATOMS AND MOLECULES by SADEK MOHAMED FITURI AMAMI A DISSERTATION Presented to the Graduate Faculty of the MISSOURI UNIVERSITY OF SCIENCE AND TECHNOLOGY In Partial Fulfillment of the Requirements for the Degree DOCTOR OF PHILOSOPHY in PHYSICS 2017 Approved by Don H. Madison, Advisor Jerry L. Peacher Michael Schulz Daniel Fischer Gregory Gelles Copyright 2017 SADEK MOHAMED FITURI AMAMI All Rights Reserved iii PUBLICATION DISSERTATION OPTION This dissertation consists of the following ten articles which have been published as follows: Paper I: Pages 31-54 have been published by Phys Rev A.91.032707 (March 2015). Paper II: Pages 55-78 have been published by Phys Rev A.90.012704 (July 2014). Paper III: Pages 79-93 have been published by J. Phys. B: At. Mol. Opt. Phys. 49 185202 (September 2016).