Stromatolite Explorer Microbial Mat Marine Ecology: Microbial
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A Study on the Phototrophic Microbial Mat Communities of Sulphur Mountain Thermal Springs and Their Association with the Endangered, Endemic Snail Physella Johnsoni
A Study on the Phototrophic Microbial Mat Communities of Sulphur Mountain Thermal Springs and their Association with the Endangered, Endemic Snail Physella johnsoni By Michael Bilyj A thesis submitted to the Faculty of Graduate Studies in partial fulfillment of the requirements for the degree of Master of Science Department of Microbiology Faculty of Science University of Manitoba Winnipeg, Manitoba October 2011 © Copyright 2011, Michael A. Bilyj 1 Abstract The seasonal population fluctuation of anoxygenic phototrophs and the diversity of cyanobacteria at the Sulphur Mountain thermal springs of Banff, Canada were investigated and compared to the drastic population changes of the endangered snail Physella johnsoni. A new species and two strains of Rhodomicrobium were taxonomically characterized in addition to new species of Rhodobacter and Erythromicrobium. Major mat-forming organisms included Thiothrix-like species, oxygenic phototrophs of genera Spirulina, Oscillatoria, and Phormidium and purple nonsulfur bacteria Rhodobacter, Rhodopseudomonas and Rhodomicrobium. Aerobic anoxygenic phototrophs comprised upwards of 9.6 x 104 CFU/cm2 of mat or 18.9% of total aerobic heterotrophic bacterial isolates at certain sites, while maximal purple nonsulfur and purple sulfur bacteria were quantified at 3.2 x 105 and 2.0 x 106 CFU/cm2 of mat, respectively. Photosynthetic activity measurements revealed incredibly productive carbon fixation rates averaging 40.5 mg C/cm2/24 h. A temporal mismatch was observed for mat area and prokaryote-based organics to P. johnsoni population flux in a ―tracking inertia‖ manner. 2 Acknowledgements It is difficult to express sufficient gratitude to my supervisor Dr. Vladimir Yurkov for his unfaltering patience, generosity and motivation throughout this entire degree. -
University of Iowa Instruments in Space
University of Iowa Instruments in Space A-D13-089-5 Wind Van Allen Probes Cluster Mercury Earth Venus Mars Express HaloSat MMS Geotail Mars Voyager 2 Neptune Uranus Juno Pluto Jupiter Saturn Voyager 1 Spaceflight instruments designed and built at the University of Iowa in the Department of Physics & Astronomy (1958-2019) Explorer 1 1958 Feb. 1 OGO 4 1967 July 28 Juno * 2011 Aug. 5 Launch Date Launch Date Launch Date Spacecraft Spacecraft Spacecraft Explorer 3 (U1T9)58 Mar. 26 Injun 5 1(U9T68) Aug. 8 (UT) ExpEloxrpelro r1e r 4 1915985 8F eJbu.l y1 26 OEGxOpl o4rer 41 (IMP-5) 19697 Juunlye 2 281 Juno * 2011 Aug. 5 Explorer 2 (launch failure) 1958 Mar. 5 OGO 5 1968 Mar. 4 Van Allen Probe A * 2012 Aug. 30 ExpPloiorenre 3er 1 1915985 8M Oarc. t2. 611 InEjuxnp lo5rer 45 (SSS) 197618 NAouvg.. 186 Van Allen Probe B * 2012 Aug. 30 ExpPloiorenre 4er 2 1915985 8Ju Nlyo 2v.6 8 EUxpKlo 4r e(rA 4ri1el -(4IM) P-5) 197619 DJuenc.e 1 211 Magnetospheric Multiscale Mission / 1 * 2015 Mar. 12 ExpPloiorenre 5e r 3 (launch failure) 1915985 8A uDge.c 2. 46 EPxpiolonreeerr 4130 (IMP- 6) 19721 Maarr.. 313 HMEaRgCnIe CtousbpeShaetr i(cF oMxu-1ltDis scaatelell itMe)i ssion / 2 * 2021081 J5a nM. a1r2. 12 PionPeioenr e1er 4 1915985 9O cMt.a 1r.1 3 EExpxlpolorerer r4 457 ( S(IMSSP)-7) 19721 SNeopvt.. 1263 HMaalogSnaett oCsupbhee Sriact eMlluitlet i*scale Mission / 3 * 2021081 M5a My a2r1. 12 Pioneer 2 1958 Nov. 8 UK 4 (Ariel-4) 1971 Dec. 11 Magnetospheric Multiscale Mission / 4 * 2015 Mar. -
Thermophilic Lithotrophy and Phototrophy in an Intertidal, Iron-Rich, Geothermal Spring 2 3 Lewis M
bioRxiv preprint doi: https://doi.org/10.1101/428698; this version posted September 27, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Thermophilic Lithotrophy and Phototrophy in an Intertidal, Iron-rich, Geothermal Spring 2 3 Lewis M. Ward1,2,3*, Airi Idei4, Mayuko Nakagawa2,5, Yuichiro Ueno2,5,6, Woodward W. 4 Fischer3, Shawn E. McGlynn2* 5 6 1. Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA 02138 USA 7 2. Earth-Life Science Institute, Tokyo Institute of Technology, Meguro, Tokyo, 152-8550, Japan 8 3. Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 9 91125 USA 10 4. Department of Biological Sciences, Tokyo Metropolitan University, Hachioji, Tokyo 192-0397, 11 Japan 12 5. Department of Earth and Planetary Sciences, Tokyo Institute of Technology, Meguro, Tokyo, 13 152-8551, Japan 14 6. Department of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth 15 Science and Technology, Natsushima-cho, Yokosuka 237-0061, Japan 16 Correspondence: [email protected] or [email protected] 17 18 Abstract 19 Hydrothermal systems, including terrestrial hot springs, contain diverse and systematic 20 arrays of geochemical conditions that vary over short spatial scales due to progressive interaction 21 between the reducing hydrothermal fluids, the oxygenated atmosphere, and in some cases 22 seawater. At Jinata Onsen, on Shikinejima Island, Japan, an intertidal, anoxic, iron- and 23 hydrogen-rich hot spring mixes with the oxygenated atmosphere and sulfate-rich seawater over 24 short spatial scales, creating an enormous range of redox environments over a distance ~10 m. -
The Vulnerability of Microbial Ecosystems in a Changing Climate: Potential Impact in Shark Bay
life Review The Vulnerability of Microbial Ecosystems in a Changing Climate: Potential Impact in Shark Bay Max Reinold 1,2, Hon Lun Wong 1,2, Fraser I. MacLeod 1,2, Julia Meltzer 1,2, April Thompson 1,2 and Brendan P. Burns 1,2,* 1 School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney 2052, Australia 2 Australian Centre for Astrobiology, The University of New South Wales, Sydney 2052, Australia * Correspondence: [email protected]; Tel.: +612-9385-3659; Fax: +612-9385-1591 Received: 30 July 2019; Accepted: 28 August 2019; Published: 2 September 2019 Abstract: The potential impact of climate change on eukaryotes, including humans, has been relatively well described. In contrast, the contribution and susceptibility of microorganisms to a changing climate have, until recently, received relatively less attention. In this review, the importance of microorganisms in the climate change discourse is highlighted. Microorganisms are responsible for approximately half of all primary production on earth, support all forms of macroscopic life whether directly or indirectly, and often persist in “extreme” environments where most other life are excluded. In short, microorganisms are the life support system of the biosphere and therefore must be included in decision making regarding climate change. Any effects climate change will have on microorganisms will inevitably impact higher eukaryotes and the activity of microbial communities in turn can contribute to or alleviate the severity of the changing climate. It is of vital importance that unique, fragile, microbial ecosystems are a focus of research efforts so that their resilience to extreme weather events and climate change are thoroughly understood and that conservation efforts can be implemented as a response. -
Stromatolites
Stromatolites What is a stromatolite? A stromatolite (literally, ‘layered rock’) is a solid structure created by single-celled microbes called cyanobacteria (blue-green algae). The cyanobacteria form colonies and trap sediment with their sticky surface coatings. The trapped sediment reacts to calcium carbonate in the water to form limestone. These limestone deposits build up very slowly – it can take a stromatolite 100 years to grow 5 cm. A 1 m-high stromatolite might be 2,000 years old! Where are they found? Shark Bay’s stromatolites are found around the shallows of Hamelin Pool , located in the southern part of the eastern bay. Between 4,000 to 6,000 years ago a massive seagrass bank called the Fauré Sill began to block tidal flow into Hamelin Pool, causing the water to become extremely concentrated, or hypersaline. The water in Hamelin Pool is twice as salty as water in the open ocean! Animals that would normally graze on algae, such as chitons and snails, cannot survive in these conditions. Around 3,000 years ago cyanobacteria started flourishing, forming stromatolites much as they did billions of years ago. More than 50 species of cyanobacteria live in Hamelin Pool. What do they look like? Stromatolites look like a cross between a cauliflower and a rock. However, unlike rocks they are actually alive – each stromatolite has a top surface layer teeming with living, active cyanobacteria. At least 3,000 million cyanobacteria can fit in 1 m2! Because cyanobacteria are plants, they photosynthesise their energy from the sun. A by-product of photosynthesis is oxygen, and if you look very carefully you may see the stromatolites gently ‘fizzing’ as tiny bubbles of oxygen are released by the cyanobacteria into the water. -
Fiscal Year 1973, and Are the EROS Program Also Supports the ERTS Data Proiected at Almost $1 Million for Fiscal Year 1974
Aeronautics and Space Report of the President r973 Activities NOTE TO READERS: ALL PRINTED PAGES ARE INCLUDED, UNNUMBERED BLANK PAGES DURING SCANNING AND QUALITY CONTROL CHECK HAVE BEEN DELETED Aeronautics and Space Report of the President 1973 A c tivities National Aeronautics and Space Administration Washington, D.C. 20546 President’s Message of Transmittal To the Congress of the United States: the European Space Conference has agreed to con- struct a space laboratory-Spacelab-for use with the I am pleased to transmit this report on our Nation’s Shuttle. progress in aeronautics and space activities during Notable progress has also been made with the Soviet 1973. Union in preparing the Apollo-Soyuz Test Project This year has been particularly significant in that scheduled for 1975. We are continuing to cooperate many past efforts to apply the benefits of space tech- with other nations in space activities and sharing of nology and information to the solution of problems on scientific information. These efforts contribute to global Earth are now coming to fruition. Experimental data peace and prosperity. from the manned Skylab station and the unmanned While we stress the use of current technology to solve Earth Resources Technology Satellite are already being current problems, we are employing unmanned space- used operationally for resource discovery and manage- craft to stimulate further advances in technology and ment, environmental information, land use planning, to obtain knowledge that can aid us in solving future and other applications. problems. Pioneer 10 gave us our first closeup glimpse Communications satellites have become one of the of Jupiter and transmitted data which will enhance principal methods of international communication our knowledge of Jupiter, the solar system, and ulti- and are an important factor in meeting national de- mately our own planet. -
The Mysterious Microbial Mats
Submarine Ring of Fire 2012: NE Lau Basin Expedition The Mysterious Microbial Mats Focus Ecological role of microbial mats in hydrothermal vent ecosystems Grade Level 5-6 (Life Science) Focus Question What is the role of microbial mats in hydrothermal vent ecosystems? Learning Objectives n Students will plan an investigation using a model ecosystem to explain some of the components of an anaerobic ecosystem. n Students will construct explanations for the potential role of microbial mats in hydrothermal vent ecosystems. Materials For each student group: q Directions for setting up Winogradsky columns from http:// quest.arc.nasa.gov/projects/astrobiology/fieldwork/lessons/ Winogradsky_5_8.pdf q Two 2-liter plastic soda bottles q Black mud from a local river, lake, or estuary, approximately 2.5 l q 2.5 l of water from each mud/sand location used q 1 small bucket q 250 ml graduated cylinder or 1 cup measure q 1 paint stirrer or large spoon q 1 sheet of newspaper q 1 tablespoon powdered chalk q One hard boiled egg yolk or one tablespoon calcium sulfate q 1 set measuring spoons q Aluminum foil or plastic wrap and rubber band q Masking tape and markers for labeling columns q (Optional) Pencil sharpener for crushing chalk q (Optional) Mortar and pestle for making egg yolk powder q (Optional) 1 lamp with 40- to 60-watt light bulb q (Optional) Microscopes and materials for making wet mounts Image captions/credits on Page 2. Audio-Visual Materials q (Optional) Interactive whiteboard 1 www.oceanexplorer.noaa.gov Submarine Ring of Fire 2012: NE Lau -
Carbon Cycling and Calcification in Hypersaline Microbial Mats
Carbon cycling and calcification in hypersaline microbial mats Dissertation zur Erlangung des Doktorgrades der Naturwissenschaften - Dr. rer. nat.- Dem Fachbereich Biologie/Chemie der Universität Bremen vorgelegt von Rebecca Ludwig Bremen März 2004 Die vorliegende Arbeit wurde in der Zeit von Oktober 2000 bis März 2004 am Max-Planck-Institut für marine Mikrobiologie in Bremen angefertigt. Gutachter Prof. Dr. Bo Barker Jørgensen Prof. Dr. Gunter O. Kirst Prüfer Prof. Dr. Friederike Koenig Dr. Henk M. Jonkers Tag des Promotionskolloqiums: 14. Mai 2004 Table of contents Table of contents Thesis outline v 1 Introduction 1 Prologue 3 Carbon cycle in microbial mats: Organisms and metabolism 8 Gradients and adaptations to diel changes 17 Calcification 20 Principles and applications of microsensors 22 Sampling/study sites 28 2 Structure and function of Chiprana mats 37 Structural and functional analysis of a microbial mat ecosystem from a unique permanent hypersaline inland lake: ‘La Salada de Chiprana’ (NE Spain) 3 Rate limitation in microbial mats 71 Limitation of oxygenic photosynthesis and respiration by phosphate and organic nitrogen in a hypersaline mat: A microsensor study 4 Effect of salinity on benthic photosynthesis 89 Reduced gas diffusivity and solubility limit metabolic rates in benthic phototrophs at high salinities 5 Calcification mechanism in a microbial mat 109 Photosynthesis controlled calcification in a hypersaline microbial mat 6 Stromatolite calcification and bioerosion 127 Balance between microbial calcification and metazoan bioerosion in modern stromatolitic oncolites Discussion 145 Summary 151 Zusammenfassung 153 Appendix 155 Danksagung 155 List of publications 157 iii Outline Thesis outline Five manuscripts are included in this thesis that investigate the carbon cycle in microbial mats with a special emphasis on community carbon flow and mechanisms of microbial calcification. -
Go Los Angeles Explorer Pass - Los Angeles, CA for Up-To-Date Information on Available Attractions, Please Check Out: Gocity.Com/Los-Angeles/En-Us/EXP-Guide
Leisure Pass Group - Go Los Angeles Explorer Pass - Los Angeles, CA For up-to-date information on available attractions, please check out: gocity.com/los-angeles/en-us/EXP-Guide Explore LA’s top attractions and get up to 60% off admission with the Go Los Angeles Explorer Pass. Choose 3, 4, 5 or 7 activities from a list of over 30 attractions and tours. Go behind the scenes at Warner Bros. Studios, hop on and off a Big Bus tour, take a selfie with your favorite celebrity at Madame Tussauds Hollywood, or ride thrilling roller coasters at Six Flags Magic Mountain. Browse the free guidebook to plan your itinerary as you go. Your pass is fully digital and valid for 30 days from first attraction visit. Free admission to ALL of these attractions! Big Bus LA 1-Day Classic Ticket Perry’s Beach Café and Rentals – Mountain Warner Bros. Studio Tour (R) Bike OR Roller Skates (All Day) Madame Tussauds Hollywood The Huntington Library, Art Collection & Aquarium of the Pacific* Botanical Gardens Night Star Tour K1 Speed Indoor Karting plus membership Hollywood Behind-the-Scenes Tour by Red Los Angeles Zoo Line Tours (R) California Science Center IMAX Movie Harbor Cruise in Long Beach iFly Hollywood (1 Flight Package) (R) TCL Chinese Theatre Tour or Movie and a Shanti Hot Yoga drink Big Bus Celebrity Lifestyle & Homes Tour The Hollywood Movie Experience by Red Line Bucca di Beppo – Farmer’s Market $15 dining Tours (R) credit Harbor Cruise in San Pedro Seaside – Santa Monica Pier $15 dining credit Hollywood Hills Hike by Bikes & Hikes LA Dave & Busters Play & Dine Package Natural History Museum of LA LA Galaxy Game Ticket La Brea Tar Pits and Museum Celebrity Bike Tour (Self-Guided) by Bikes & Whale Watch in Long Beach Hikes LA Whale Watch in San Pedro Food, Arts, Culture DTLA Walking Tour GRAMMY Museum (R) – Reservations required Battleship IOWA Museum – Express Entry *These attractions are AFCTP partners and may be a better value independent of the Smart Destination website. -
“How to Make a Microbial Mat”
Science Lesson Plan: How to Make a Microbial Mat Brad Bebout, Allison Pfeifer, Erich Fleming, Adrienne Frisbee, Jan Winter NASA Ames Research Center Background Microbes have shaped the atmosphere and climate of Earth over geologic time. Microbes may be important in the search for life both within our solar system and on extrasolar planets. Some of the earliest and most widespread evidence of life on Earth were in the form of microbial mats. Microbial mats are complex, usually layered collections of microorganisms that can be observed in a number of aquatic ecosystems. They are complete ecosystems in miniature. In this activity, students create living versions of the microbial mats that have existed on earth for 3.5 billion years. Living microbial mats constructed in plastic boxes. Main Concepts Photosynthetic microbial mats are complex ecosystems that generally exhibit vertical gradients in light, and chemical compounds. These gradients are established by photosynthesis at the top of the mat and control the functioning of the intact ecosystem. Scientific Question What factors contribute to the vertical structure of microbial mats in the field? Objectives 1. The students will create their own microbial mat. 2. The microbial mat will be available for later experimentation and/or observation. Abstract of Lesson Microbial mats are defined as layered communities of microorganisms that are only a few millimeters thick. Many biogeochemical processes are conducted by the organisms in the mat to sustain life. For example, the mats perform photosynthesis, and respiration, and can acquire nitrogen through the process of nitrogen fixation. The mat community is a fully functioning ecosystem containing both producers and consumers or organic carbon. -
Analysis of Stromatolite Reservoir Potential Using Computed Tomography By: Grant Noennig
Analysis of Stromatolite Reservoir Potential using Computed Tomography By: Grant Noennig A thesis submitted in partial fulfillment of the requirements of the degree of Bachelor of Arts (Geology) At Gustavus Adolphus College 2016 Volumetric Analysis of Stromatolite Reservoir Potential using Computed Tomography By: Grant Noennig Under the supervision of Dr. Julie Bartley ABSTRACT Stromatolites are lithified microbial mats formed when microbes bind and trap carbonate grains or induce precipitation of carbonate material (Ahr et al., 2011). If sufficient porosity occurs within these microbialites, they have potential to contain and transmit fluids, such as petroleum. Carbonate rock accounts for more than half of the world's oil reservoirs and 40% of the world's natural gas reservoirs, but due to the complexity of fractures and matrix composing these beds, their reservoir potentials are difficult to estimate (EIA, 2013). Stromatolites from the Laney Member of the hydrocarbon-rich Green River Formation in the central United States offer an opportunity to study reservoir potential in a well-exposed succession. Most research on carbonate reservoir potential is sedimentary, stratigraphic, or petrophysical, but more complex reservoirs like stromatolites require specific techniques to determine their potential (Rezende et al., 2013). In order to determine the porosity, permeability, and pore-connectivity of this facies, samples from this location were cut into rectangular blocks and scanned using x-ray computed tomography (XRCT) at the University of Minnesota. XRCT analysis allows for the quantification of porosity and permeability values to evaluate the reservoir potential at a small scale, in three dimensions. Preliminary results indicate that Green River stromatolites are highly variable in their porosity characteristics, but some have sufficient porosity and permeability to be effective reservoir rock. -
Grain Trapping by Microbial Mats: Implications for Stromatolites
Grain trapping by microbial mats: Implications for stromatolites Frank Corsetti Department of Earth Sciences University of Southern California Rocks = Time Rocks = Environment Rocks = History of Life Stromatolite sharkbay.org Stromatolite Textbook Definition • laminated • organo-sedimentary structure • built by microbes (CCALA) Cyanobacteria Cyanobacteria microbial mat (“pond scum”) Stromatolite Textbook Definition Trapping and Binding 100 microns Stromatolite courtesy of Y. Ibarra Textbook Definition Mineral Precipitation Stromatolite Significance • Macroscopic from Microscopic Stromatolite Significance putative • Oldest fossils in the world ^ Warrawoona Fm Western Australia 3.5 Ga 2 cm Ancient Life: Greatest Hits Cambrian explosion Hadean Archean Proterozoic Phan. 4.0 3.0 2.0 1.0 0 billions of years LETTERS NATURE | Vol 457 | 5 February 2009 Masirah Bay Fm. soft-body parts, as detected in Doushantuo phosphorites19,22, is rare in ααα ααα αββ the geological record. Siliceous sponge spicules are metastable and S R C (17%) they can be difficult to isolate and identify unambiguously in clastic 26 sediments. Moreover, several orders of Demospongiae completely *** * 358 → 217 lack mineral skeletons. On the other hand, the studies of the lipid ααα ααα compositions of Porifera show a remarkable diversity of distinctive αββ C27 (21%) 13,27,28 R structures with abundance patterns aligned to phylogeny S 372 → 217 The demosponge biomarker record for the Huqf Supergroup supports the hypothesis that Metazoa first achieved ecological 1 αββ ααα ααα prominence in shallow marine waters of the Cryogenian . It has been C28 (16%) 386 → 217 proposed that Neoproterozoic sponges and rangeomorphs feeding S R on reactive dissolved or particulate marine organic matter29 may have progressively oxygenated their benthic environments as they moved ααα ααα αββ 24 C29 (39%) from shallow water into deeper waters .