HUMAN GENE MAPPING WORKSHOPS C.1973–C.1991
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(APOCI, -C2, and -E and LDLR) and the Genes C3, PEPD, and GPI (Whole-Arm Translocation/Somatic Cell Hybrids/Genomic Clones/Gene Family/Atherosclerosis) A
Proc. Natl. Acad. Sci. USA Vol. 83, pp. 3929-3933, June 1986 Genetics Regional mapping of human chromosome 19: Organization of genes for plasma lipid transport (APOCI, -C2, and -E and LDLR) and the genes C3, PEPD, and GPI (whole-arm translocation/somatic cell hybrids/genomic clones/gene family/atherosclerosis) A. J. LUSIS*t, C. HEINZMANN*, R. S. SPARKES*, J. SCOTTt, T. J. KNOTTt, R. GELLER§, M. C. SPARKES*, AND T. MOHANDAS§ *Departments of Medicine and Microbiology, University of California School of Medicine, Center for the Health Sciences, Los Angeles, CA 90024; tMolecular Medicine, Medical Research Council Clinical Research Centre, Harrow, Middlesex HA1 3UJ, United Kingdom; and §Department of Pediatrics, Harbor Medical Center, Torrance, CA 90509 Communicated by Richard E. Dickerson, February 6, 1986 ABSTRACT We report the regional mapping of human from defects in the expression of the low density lipoprotein chromosome 19 genes for three apolipoproteins and a lipopro- (LDL) receptor and is strongly correlated with atheroscle- tein receptor as well as genes for three other markers. The rosis (15). Another relatively common dyslipoproteinemia, regional mapping was made possible by the use of a reciprocal type III hyperlipoproteinemia, is associated with a structural whole-arm translocation between the long arm of chromosome variation of apolipoprotein E (apoE) (16). Also, a variety of 19 and the short arm of chromosome 1. Examination of three rare apolipoprotein deficiencies result in gross perturbations separate somatic cell hybrids containing the long arm but not of plasma lipid transport; for example, apoCII deficiency the short arm of chromosome 19 indicated that the genes for results in high fasting levels oftriacylglycerol (17). -
Wellcome Trust Annual Report and Financial Statements 2017 Contents
Annual Report and Financial Statements 2017 2 Wellcome Trust Annual Report and Financial Statements 2017 Contents Report from the Chair and the Director 5 Trustee’s Report 8 What we do 8 Review of Charitable Activities 9 Review of Investment Activities 18 Financial Review 29 Structure and Governance 34 Risk Management 37 Remuneration Report 40 Audit Committee Report 43 Independent Auditor’s Report 45 Financial Statements 58 Consolidated Statement of Financial Activities 58 Consolidated Balance Sheet 59 Statement of Financial Activities of the Trust 60 Balance Sheet of the Trust 61 Consolidated Cash Flow Statement 62 Notes to the Financial Statements 63 Reference and Administrative Details 117 3 Wellcome Trust Annual Report and Financial Statements 2017 “ At Wellcome, we believe in the power of ideas to improve health” Jeremy Farrar Director 4 Wellcome Trust Annual Report and Financial Statements 2017 Report from the Chair and the Director “Our core approach is funding people to explore great ideas, at every step of the way from discovery to impact” At Wellcome, we believe in the power of ideas to improve cause of maternal mortality in the world. It also includes health. Funded from our independent investment portfolio, supporting research in the humanities and social sciences, we support thousands of scientists and researchers in more such as a project which this year published ethical guidelines than 70 countries, as well as innovators, educators and artists. for involving pregnant women in Zika vaccine research. Together, we take on big problems, fuel imaginations and spark And resources like the Human Induced Pluripotent Stem Cell debate, working always to achieve better health for everyone. -
Harnessing the Power of Epigenetics for Targeted Nutrition
SPONSOR FEATURE SPONSOR FEATURE NESTLÉ RESEARCH: Harnessing the power of epigenetics for targeted nutrition Authors Diet and genomes interact. Because of its contin- products that are nutritious, safe, promote and Martin Kussmann*, Jennifer Dean*, uous and lifelong impact, nutrition might be the maintain health, and prevent disease. With the Rondo P. Middleton†, Peter J. van most important environmental factor for human advent and development of many new technolo- Bladeren* & Johannes le Coutre* health. Molecular nutrition research strives gies, molecular nutrition research has opened to understand this interaction. Nutrigenetics up new doors of understanding – not only con- *Nestlé Research Center, addresses how an individual’s genetic make-up cerning which dietary components may impact 1000 Lausanne 26, Switzerland. leads to a predisposition for nutritional health; an organism’s health, but also how. These new †Nestlé Purina Research, St. Louis, MO, nutrigenomics (encompassing transcriptomics, insights have allowed a greater understanding 63164 USA. proteomics and metabonomics) asks how nutri- of the systems involved at multiple levels, from tion modulates gene expression; and epigenetics whole animal to the cellular and molecular lev- provides insights into a new level of regulation els. Although challenges in this area still remain, involving mechanisms of development, parental the main focus continues to be the improvement gene imprinting and metabolic programming that of health through diet. Modern molecular nutri- are beyond genetic control. tional research aims at health promotion, dis- Tailoring diets and nutrient compositions to the ease prevention, performance improvement and needs of consumer groups that share the same benefit-risk assessment1. health state, life stage or life style is a main goal Nutrition has conventionally been considered of current nutritional research. -
Gene Mapping Techniques
Developmental Neurobiology, edited by Philippe Evrard and Alexandre Minkowski. Nestle Nutrition Workshop Series, Vol. 12. Nestec Ltd., Vevey/Raven Press, Ltd., New York © 1989. Gene Mapping Techniques Jean-Louis Guenet Institut Pasteur, 75724 Paris Cedex 15, France Very accurate gene mapping is essential in both man and laboratory mammals (1- 3). Several techniques have been used over the last 50 years to localize mammalian genes on the chromosomes of a given species. This chapter reviews these tech- niques, with special emphasis on the most recent ones that represent a true break- through in formal genetics. CLASSICAL GENE MAPPING TECHNIQUES AND THEIR LIMITATIONS When two genes are linked they have a tendency to cosegregate during successive generations. The closer the linkage, the more absolute is the cosegregation. This is the fundamental principle of gene mapping, which has been successfully applied to all species, including plants, over many years. In mammals such as humans and mice, the continued discovery of marker genes scattered throughout the genome has facilitated the mapping of new genes so that we now possess for these two species, particularly the mouse, linkage maps that are far more detailed than those existing for other mammals. In the mouse, special matings can be set up, with appropriate stocks, to test for possible autosomal linkage after two successive reproductive rounds: In general, cross-back crosses are used, cross-intercrosses being reserved for studies in which the viability or the fertility of the homozygous mutant under study is impaired. In humans investigations concerning linkage are based on pedigree analysis. In other words, for both species it is essential to define as a starting point a situa- tion where two genes are heterozygous and either in repulsion A + / + B or in cou- pling AB/ + +, then to look for changes in this configuration after a reproductive cycle (forms in coupling giving rise to forms in repulsion and vice versa), and fi- nally to count the percentage or frequency of these recombination events. -
Uman Enome News
uman enome news ISSN:l050-6101 Vol. 3, No.1, May 1991 DOE Holds Contractor-Grantee Workshop Physical Mapping Efforts Going Well; Gels Increasing Sequencing Efficiency he DOE Human Genome Prograll1 held its second Contractor-Grantee Workshop Charles R. Cantor and HGMIS gratefully Tin Santa Fe, New Mexico, on February l7-W. More than 200 program-sponsored acknowledge contribu scientists attended the meeting, in addition to invited guests and industry represen tions to this article by tatives. DOE-supported human genome research projects are conducted at 7 DOE Elbert W. Branscomb, national laboratories (including its 3 human genome centers), 37 major universities, Anthony V. Carrano, and 32 companies through collaborations and awards. Projects were represented by Leroy E. Hood, oral presentations or posters. Robert K. Moyzis, and Robert J. Robbins. Six platform sessions focused on the more focus is needed on the immediate following: informatics needs of ongoing biology projects. • physical mapping progress, Many parallel efforts under way in cloning, • large DNA fragment cloning, informatics, mapping, and sequencing will • strategies for preparing samples for further improve the technologies required for efficient DNA sequencing, genomics. Program participants feel that this situation is healthy at present and that a few • new methods for a variety of genome efforts, • DNA sequencing instrumentation, and In This fssue .•. • database and computer algorithm needs for existing or projected genome Page Genome News research. 1 DOE Holds Contractor-Grantee Workshop David Galas, Associate Director, Office of 5 LANL, Life Technologies Approve CRADA Health and Environmental Research (OHER), 6 Conncil on Competitiveness Urges Action spoke about the relationship between the 7 Moore Calls Tech Transfer Critical to Fntnre' Human Genome Program and other OHER 8 NIH Discusses eDNA Role with Invited Group programs. -
Biochemistry and the Genomic Revolution 1.1
Dedication About the authors Preface Tools and Techniques Clinical Applications Molecular Evolution Supplements Supporting Biochemistry, Fifth Edition Acknowledgments I. The Molecular Design of Life 1. Prelude: Biochemistry and the Genomic Revolution 1.1. DNA Illustrates the Relation between Form and Function 1.2. Biochemical Unity Underlies Biological Diversity 1.3. Chemical Bonds in Biochemistry 1.4. Biochemistry and Human Biology Appendix: Depicting Molecular Structures 2. Biochemical Evolution 2.1. Key Organic Molecules Are Used by Living Systems 2.2. Evolution Requires Reproduction, Variation, and Selective Pressure 2.3. Energy Transformations Are Necessary to Sustain Living Systems 2.4. Cells Can Respond to Changes in Their Environments Summary Problems Selected Readings 3. Protein Structure and Function 3.1. Proteins Are Built from a Repertoire of 20 Amino Acids 3.2. Primary Structure: Amino Acids Are Linked by Peptide Bonds to Form Polypeptide Chains 3.3. Secondary Structure: Polypeptide Chains Can Fold Into Regular Structures Such as the Alpha Helix, the Beta Sheet, and Turns and Loops 3.4. Tertiary Structure: Water-Soluble Proteins Fold Into Compact Structures with Nonpolar Cores 3.5. Quaternary Structure: Polypeptide Chains Can Assemble Into Multisubunit Structures 3.6. The Amino Acid Sequence of a Protein Determines Its Three-Dimensional Structure Summary Appendix: Acid-Base Concepts Problems Selected Readings 4. Exploring Proteins 4.1. The Purification of Proteins Is an Essential First Step in Understanding Their Function 4.2. Amino Acid Sequences Can Be Determined by Automated Edman Degradation 4.3. Immunology Provides Important Techniques with Which to Investigate Proteins 4.4. Peptides Can Be Synthesized by Automated Solid-Phase Methods 4.5. -
Precision Medicine As Treatment for Primary Immu- Nodeficiency and Immune Dysregulation
Archive of SID Immunology and Genetics Journal Received: 19 October 2019 Accepted: 24 November 2019 Review Article Published online: 22 December 2019 Doi: 10.22034/igj.2019.206436.1026 Precision Medicine as Treatment for Primary Immu- nodeficiency and Immune Dysregulation Rodrigo Hoyos-Bachiloglu1, Craig D. Platt2* 1 Department of Pediatric Infectious Diseases and Immunology,Pontificia Universidad Católica de Chile, Santiago, Chile 2 Division of Immunology, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA Abstract “Precision medicine” is the use of therapy that targets the molecular basis of a patient’s disease process. This approach is increasingly well-established in treatment of monogenic disorders of immunity, in- cluding primary immunodeficiencies and primary immune regulatory disorders. This is due to the exquisite detail with which many immune pathways have been defined, and the wide variety of immune modulatory medications that target these pathways. Here we review many of the most effective uses of this approach and suggest a framework for classifying these strategies. Keywords Precision medicine, Targeted therapy, Primary immunodeficiency disease, immune dys- regulation. * Corresponding author: Craig D. Platt E-mail: [email protected] 1. Department of Pediatric Infectious Diseases and Immunology,Pontificia Universidad Católica de Chile, Santiago, Chile2. Division of Immunology, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA Introduction large and increasing repertoire of immune mod- Widespread availability of “next generation” se- ulatory medications, many designed for treating quencing techniques, including targeted sequenc- common autoimmune diseases, are available ing panels and whole exome sequencing has for use as targeted therapies. In this review, we ushered in an era where monogenic causes of im- present a framework for classifying “precision munodeficiency and immune dysregulation can medicine” strategies in hopes that this will aid be determined with speed and precision. -
Genetic Mapping and Manipulation: Chapter 2-Two-Point Mapping with Genetic Markers* §
Genetic mapping and manipulation: Chapter 2-Two-point mapping with genetic markers* § David Fay , Department of Molecular Biology, University of Wyoming, Laramie, Wyoming 82071-3944 USA Table of Contents 1. The basics ..............................................................................................................................1 2. Calculating map distances ......................................................................................................... 3 3. Other considerations ................................................................................................................. 5 4. References ..............................................................................................................................6 1. The basics The basics. Two-point mapping, wherein a mutation in the gene of interest is mapped against a marker mutation, is primarily used to assign mutations to individual chromosomes. It can also give at least a rough indication of distance between the mutation and the markers used. On the surface, the concept of two-point mapping to determine chromosomal linkage is relatively straightforward. It can, however, be the source of some confusion when it comes to processing the actual data based on phenotypic frequencies to accurately determine genetic distances. It is also worth noting that most researchers don't bother much with exhaustive two-point mapping anymore. Once we've assigned our mutation to a linkage group, it's generally off to the races with three-point and SNP mapping -
Female Fellows of the Royal Society
Female Fellows of the Royal Society Professor Jan Anderson FRS [1996] Professor Ruth Lynden-Bell FRS [2006] Professor Judith Armitage FRS [2013] Dr Mary Lyon FRS [1973] Professor Frances Ashcroft FMedSci FRS [1999] Professor Georgina Mace CBE FRS [2002] Professor Gillian Bates FMedSci FRS [2007] Professor Trudy Mackay FRS [2006] Professor Jean Beggs CBE FRS [1998] Professor Enid MacRobbie FRS [1991] Dame Jocelyn Bell Burnell DBE FRS [2003] Dr Philippa Marrack FMedSci FRS [1997] Dame Valerie Beral DBE FMedSci FRS [2006] Professor Dusa McDuff FRS [1994] Dr Mariann Bienz FMedSci FRS [2003] Professor Angela McLean FRS [2009] Professor Elizabeth Blackburn AC FRS [1992] Professor Anne Mills FMedSci FRS [2013] Professor Andrea Brand FMedSci FRS [2010] Professor Brenda Milner CC FRS [1979] Professor Eleanor Burbidge FRS [1964] Dr Anne O'Garra FMedSci FRS [2008] Professor Eleanor Campbell FRS [2010] Dame Bridget Ogilvie AC DBE FMedSci FRS [2003] Professor Doreen Cantrell FMedSci FRS [2011] Baroness Onora O'Neill * CBE FBA FMedSci FRS [2007] Professor Lorna Casselton CBE FRS [1999] Dame Linda Partridge DBE FMedSci FRS [1996] Professor Deborah Charlesworth FRS [2005] Dr Barbara Pearse FRS [1988] Professor Jennifer Clack FRS [2009] Professor Fiona Powrie FRS [2011] Professor Nicola Clayton FRS [2010] Professor Susan Rees FRS [2002] Professor Suzanne Cory AC FRS [1992] Professor Daniela Rhodes FRS [2007] Dame Kay Davies DBE FMedSci FRS [2003] Professor Elizabeth Robertson FRS [2003] Professor Caroline Dean OBE FRS [2004] Dame Carol Robinson DBE FMedSci -
Biology, Bioinformatics, Bioengineering, Biophysics, Biostatistics, Neuroscience, Medicine, Ophthalmology, and Dentistry
Biology, Bioinformatics, Bioengineering, Biophysics, Biostatistics, Neuroscience, Medicine, Ophthalmology, and Dentistry This section contains links to textbooks, books, and articles in digital libraries of several publishers (Springer, Elsevier, Wiley, etc.). Most links will work without login on any campus (or remotely using the institution’s VPN) where the institution (company) subscribes to those digital libraries. For De Gruyter and the associated university presses (Chicago, Columbia, Harvard, Princeton, Yale, etc.) you may have to go through your institution’s library portal first. A red title indicates an excellent item, and a blue title indicates a very good (often introductory) item. A purple year of publication is a warning sign. Titles of Open Access (free access) items are colored green. The library is being converted to conform to the university virtual library model that I developed. This section of the library was updated on 06 September 2021. Professor Joseph Vaisman Computer Science and Engineering Department NYU Tandon School of Engineering This section (and the library as a whole) is a free resource published under Attribution-NonCommercial-NoDerivatives 4.0 International license: You can share – copy and redistribute the material in any medium or format under the following terms: Attribution, NonCommercial, and NoDerivatives. https://creativecommons.org/licenses/by-nc-nd/4.0/ Copyright 2021 Joseph Vaisman Table of Contents Food for Thought Biographies Biology Books Articles Web John Tyler Bonner Morphogenesis Evolution -
The Circular Genetic Map of Phage 813 by Ron Baker and Irwin Tessman
THE CIRCULAR GENETIC MAP OF PHAGE 813 BY RON BAKER AND IRWIN TESSMAN DEPARTMENT OF BIOLOGICAL SCIENCES, PURDUE UNIVERSITY, LAFAYETTE, INDIANA Communicated by S. E. Luria, July 24, 1967 Because of its small size1 phage S13 is suitable for a study of all its genes and their functions. With this aim, conditionally lethal mutants of the suppressible (su) and temperature-sensitive (t) type have been isolated and classified into seven complementation groups, and the general function of five of the genes implicitly defined by these complementation groups has been determined.8-10 This paper is concerned with the mapping of the seven known phage genes, with the ultimate aim of understanding both the organization of the phage genome and the mechanism by which it undergoes genetic recombination. Although the DNA molecule of S13, as shown for the closely related phage ,X174, is physically circular both in the single-stranded form of the mature virus11 and in the double-stranded replicative form,12' 13 this does not necessarily imply that the genetic map should also be circular since circular DNA is neither necessary nor sufficient for genetic circularity. On the one hand, a linear DNA molecule can give rise to a circular genetic map if the nucleotide sequences are circularly permuted;14 an example is the T2-T4 phage system.'5-17 On the other hand, a circular DNA can yield a linear map if recombination involves opening of the ring at a unique site, as seems to occur for phage X, which forms a closed DNA molecule after infections yet has a linear vegetative and prophage genetic map.19 In this report it will be shown that the genetic map of S13, as determined entirely by 3-factor crosses, is indeed circular, and, as might be expected for a circular genome, the occurrence of double recombination events appears to be the rule. -
Clinical Molecular Genetics in the Uk C.1975–C.2000
CLINICAL MOLECULAR GENETICS IN THE UK c.1975–c.2000 The transcript of a Witness Seminar held by the History of Modern Biomedicine Research Group, Queen Mary, University of London, on 5 February 2013 Edited by E M Jones and E M Tansey Volume 48 2014 ©The Trustee of the Wellcome Trust, London, 2014 First published by Queen Mary, University of London, 2014 The History of Modern Biomedicine Research Group is funded by the Wellcome Trust, which is a registered charity, no. 210183. ISBN 978 0 90223 888 6 All volumes are freely available online at www.history.qmul.ac.uk/research/modbiomed/ wellcome_witnesses/ Please cite as: Jones E M, Tansey E M. (eds) (2014) Clinical Molecular Genetics in the UK c.1975–c.2000. Wellcome Witnesses to Contemporary Medicine, vol. 48. London: Queen Mary, University of London. CONTENTS What is a Witness Seminar? v Acknowledgements E M Tansey and E M Jones vii Illustrations and credits ix Abbreviations xi Ancillary guides xiii Introduction Professor Bob Williamson xv Transcript Edited by E M Jones and E M Tansey 1 Appendix 1 Photograph, with key, of delegates attending The Molecular Biology of Thalassaemia conference in Kolimbari, Crete, 1978 88 Appendix 2 Extracts from the University of Leiden postgraduate course Restriction Fragment Length Polymorphisms and Human Genetics, 1982 91 Appendix 3 Archival material of the Clinical Molecular Genetics Society 95 Biographical notes 101 References 113 Index 131 Witness Seminars: Meetings and Publications 143 WHAT IS A WITNESS SEMINAR? The Witness Seminar is a specialized form of oral history, where several individuals associated with a particular set of circumstances or events are invited to meet together to discuss, debate, and agree or disagree about their memories.