The Fluid—Mosaic Model of Membrane Structure: Still Relevant to Understanding the Structure, Function and Dynamics of Biological Membranes After More Than 40 Years☆
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Common Features of All Cells Bacterial
www.denniskunkel.com Tour of the Cell part 1 Today’s Topics • Finish Nucleic Acids Cells • Properties of all cells – Prokaryotes and Eukaryotes • Functions of Major Cellular Organelles – Information – Synthesis&Transport – Energy Conversion – Recycling – Structure and Movement Bacterial cell Animal Cell 9/12/12 (Prokaryote) (Eukaryote) 2 www.denniskunkel.com Common features of all cells • Plasma Membrane – defines inside from outside • Cytosol – Semifluid “inside” of the cell • DNA “chromosomes” - Genetic material – hereditary instructions • Ribosomes – “factories” to synthesize proteins 4 Plasma membrane Bacterial (Prokaryotic) Cell Ribosomes! Plasma membrane! Bacterial Cell wall! chromosome ! Phospholipid bilayer Proteins 0.5 !m! Flagella! No internal membranes 5 6 1 Figure 6.2b 1 cm Eukaryotic Cell Frog egg 1 mm Human egg 100 µm Most plant and animal cells 10 m µ Nucleus Most bacteria Light microscopy Mitochondrion 1 µm Super- 100 nm Smallest bacteria Viruses resolution microscopy Ribosomes 10 nm Electron microscopy Proteins Lipids 1 nm Small molecules Contains internal organelles 7 0.1 nm Atoms endoplasmicENDOPLASMIC RETICULUM reticulum (ER) ENDOPLASMIC RETICULUM (ER) NUCLEUS NUCLEUS Rough ER Smooth ER nucleus Rough ER Smooth ER Nucleus Plasma membrane Plasma membrane Centrosome Centrosome cytoskeletonCYTOSKELETON CYTOSKELETON Microfilaments You should Microfilaments Intermediate filaments know everything Intermediate filaments Microtubules in Fig 6.9 ribosomesRibosomes Microtubules Ribosomes cytosol GolgiGolgi apparatus apparatus Golgi apparatus Peroxisome Peroxisome In animal cells but not plant cells: In animal cells but not plant cells: Lysosome Lysosomes Lysosome Lysosomes Figure 6.9 Centrioles Figure 6.9 Centrioles Mitochondrion lysosome Flagella (in some plant 9sperm) Mitochondrion Flagella (in some plant10 sperm) mitochondrion Nuclear envelope Nucleus Nucleus 1 !m Nucleolus Chromatin Nuclear envelope: Inner membrane Outer membrane Pores Pore complex Rough ER Surface of nuclear envelope. -
Expression and Localization of Myosin VI in Developing Mouse Spermatids
Histochem Cell Biol DOI 10.1007/s00418-017-1579-z ORIGINAL PAPER Expression and localization of myosin VI in developing mouse spermatids Przemysław Zakrzewski1 · Robert Lenartowski2 · Maria Jolanta Re˛dowicz3 · Kathryn G. Miller4 · Marta Lenartowska1 Accepted: 4 May 2017 © The Author(s) 2017. This article is an open access publication Abstract Myosin VI (MVI) is a versatile actin-based and Sertoli cell actin hoops. Since this is the frst report of motor protein that has been implicated in a variety of dif- MVI expression and localization during mouse spermio- ferent cellular processes, including endo- and exocytic genesis and MVI partners in developing sperm have not yet vesicle traffcking, Golgi morphology, and actin structure been identifed, we discuss some probable roles for MVI stabilization. A role for MVI in crucial actin-based pro- in this process. During early stages, MVI is hypothesized cesses involved in sperm maturation was demonstrated in to play a role in Golgi morphology and function as well Drosophila. Because of the prominence and importance of as in actin dynamics regulation important for attachment actin structures in mammalian spermiogenesis, we inves- of developing acrosome to the nuclear envelope. Next, tigated whether MVI was associated with actin-mediated the protein might also play anchoring roles to help gener- maturation events in mammals. Both immunofuorescence ate forces needed for spermatid head elongation. Moreo- and ultrastructural analyses using immunogold labeling ver, association of MVI with actin that accumulates in showed that MVI was strongly linked with key structures the Sertoli cell ectoplasmic specialization and other actin involved in sperm development and maturation. -
Bacterial Cell Membrane
BACTERIAL CELL MEMBRANE Dr. Rakesh Sharda Department of Veterinary Microbiology NDVSU College of Veterinary Sc. & A.H., MHOW CYTOPLASMIC MEMBRANE ➢The cytoplasmic membrane, also called a cell membrane or plasma membrane, is about 7 nanometers (nm; 1/1,000,000,000 m) thick. ➢It lies internal to the cell wall and encloses the cytoplasm of the bacterium. ➢It is the most dynamic structure of a prokaryotic cell. Structure of cell membrane ➢The structure of bacterial plasma membrane is that of unit membrane, i.e., a fluid phospholipid bilayer, composed of phospholipids (40%) and peripheral and integral proteins (60%) molecules. ➢The phospholipids of bacterial cell membranes do not contain sterols as in eukaryotes, but instead consist of saturated or monounsaturated fatty acids (rarely, polyunsaturated fatty acids). ➢Many bacteria contain sterol-like molecules called hopanoids. ➢The hopanoids most likely stabilize the bacterial cytoplasmic membrane. ➢The phospholipids are amphoteric molecules with a polar hydrophilic glycerol "head" attached via an ester bond to two non-polar hydrophobic fatty acid tails. ➢The phospholipid bilayer is arranged such that the polar ends of the molecules form the outermost and innermost surface of the membrane while the non-polar ends form the center of the membrane Fluid mosaic model ➢The plasma membrane contains proteins, sugars, and other lipids in addition to the phospholipids. ➢The model that describes the arrangement of these substances in lipid bilayer is called the fluid mosaic model ➢Dispersed within the bilayer are various structural and enzymatic proteins, which carry out most membrane functions. ➢Some membrane proteins are located and function on one side or another of the membrane (peripheral proteins). -
Spring 2013 Lecture 23
CHM333 LECTURES 23: 3/25/13 SPRING 2013 Professor Christine Hrycyna LIPIDS III EFFECT OF CHOLESTEROL ON MEMBRANES: - Bulky rigid molecule - Moderates fluidity of membranes – both increases and decreases o Cholesterol in membranes DECREASES fluidity because it is rigid o Prevents crystallization (making solid) of fatty acyl side chains by fitting between them. Disrupts close packing of fatty acyl chains. Therefore, INCREASED fluidity BIOLOGICAL MEMBRANES CONTAIN PROTEINS AS WELL AS LIPIDS: - Proteins are 20-80% of cell membrane - Rest is lipid or carbohydrate; supramolecular assembly of lipid, protein and carbohydrate - Proteins are also distributed asymmetrically - TWO classes of Membrane Proteins: o Integral Membrane Proteins o Peripheral Membrane Proteins 178 CHM333 LECTURES 23: 3/25/13 SPRING 2013 Professor Christine Hrycyna - INTEGRAL MEMBRANE PROTEINS o Located WITHIN the lipid bilayer o Usually span the bilayer one or more times – called transmembrane (TM) proteins o Hydrophobic amino acids interact with fatty acid chains in the hydrophobic core of the membrane o Can be removed from the membrane with detergents like SDS – need to disrupt the hydrophobic interactions § Membrane Disruption Animation: o http://www.youtube.com/watch?v=AHT37pvcjc0 o Function: § Transporters – moving molecules into or out of cells or cell membranes § Receptors – transmitting signals from outside of the cell to the inside - β Barrel Integral Membrane Proteins § Barrel-shaped membrane protein that is made up of antiparallel β-strands with hydrophilic (interior) and hydrophobic (facing lipid tails). § So far found only in outer membranes of Gram-negative bacteria, cell wall of Gram-positive bacteria, and outer membranes of mitochondria and chloroplasts. 179 CHM333 LECTURES 23: 3/25/13 SPRING 2013 Professor Christine Hrycyna - α-Helical Membrane Proteins - Can cross the membrane once or many times and have multiple transmembrane segments. -
Biological Membranes and Transport Membranes Define the External
Biological Membranes and Transport Membranes define the external boundaries of cells and regulate the molecular traffic across that boundary; in eukaryotic cells, they divide the internal space into discrete compartments to segregate processes and components. Membranes are flexible, self-sealing, and selectively permeable to polar solutes. Their flexibility permits the shape changes that accompany cell growth and movement (such as amoeboid movement). With their ability to break and reseal, two membranes can fuse, as in exocytosis, or a single membrane-enclosed compartment can undergo fission to yield two sealed compartments, as in endocytosis or cell division, without creating gross leaks through cellular surfaces. Because membranes are selectively permeable, they retain certain compounds and ions within cells and within specific cellular compartments, while excluding others. Membranes are not merely passive barriers. Membranes consist of just two layers of molecules and are therefore very thin; they are essentially two-dimensional. Because intermolecular collisions are far more probable in this two-dimensional space than in three-dimensional space, the efficiency of enzyme-catalyzed processes organized within membranes is vastly increased. The Molecular Constituents of Membranes Molecular components of membranes include proteins and polar lipids, which account for almost all the mass of biological membranes, and carbohydrate present as part of glycoproteins and glycolipids. Each type of membrane has characteristic lipids and proteins. The relative proportions of protein and lipid vary with the type of membrane, reflecting the diversity of biological roles (as shown in table 12-1, see below). For example, plasma membranes of bacteria and the membranes of mitochondria and chloroplasts, in which many enzyme-catalyzed processes take place, contain more protein than lipid. -
Cell-Cell Interactions
7 Cell-Cell Interactions Concept Outline 7.1 Cells signal one another with chemicals. Receptor Proteins and Signaling between Cells. Receptor proteins embedded in the plasma membrane change shape when they bind specific signal molecules, triggering a chain of events within the cell. Types of Cell Signaling. Cell signaling can occur between adjacent cells, although chemical signals called hormones act over long distances. 7.2 Proteins in the cell and on its surface receive signals from other cells. Intracellular Receptors. Some receptors are located within the cell cytoplasm. These receptors respond to lipid- soluble signals, such as steroid hormones. Cell Surface Receptors. Many cell-to-cell signals are water-soluble and cannot penetrate membranes. Instead, the signals are received by transmembrane proteins protruding out from the cell surface. 7.3 Follow the journey of information into the cell. FIGURE 7.1 Persimmon cells in close contact with one another. These Initiating the Intracellular Signal. Cell surface receptors plant cells and all cells, no matter what their function, interact often use “second messengers” to transmit a signal to the with their environment, including the cells around them. cytoplasm. Amplifying the Signal: Protein Kinase Cascades. Surface receptors and second messengers amplify signals as id you know that each of the 100 trillion cells of your they travel into the cell, often toward the cell nucleus. Dbody shares one key feature with the cells of tigers, bumblebees, and persimmons (figure 7.1)—a feature that 7.4 Cell surface proteins mediate cell-cell interactions. most bacteria and protists lack? Your cells touch and com- The Expression of Cell Identity. -
Phosphatases and Differentiation of the Golgi Apparatus
J. Cell Sci. 4, 455-497 (1969) 455 Printed in Great Britain PHOSPHATASES AND DIFFERENTIATION OF THE GOLGI APPARATUS MARIANNE DAUWALDER, W. G. WHALEY AND JOYCE E. KEPHART The Cell Research Institute, Tlie University of Texas at Austin, Texas, U.S.A. SUMMARY Cytochemical techniques for the electron microscopic localization of inosine diphosphatase, thiamine pyrophosphatase, and acid phosphatase have been applied to the developing root tip of Zea mays. Following formaldehyde fixation the Golgi apparatus of most of the cells showed reaction specificity for IDPase and TPPase. Following glutaraldehyde fixation marked localiza- tion of IDPase reactivity in the Golgi apparatus was limited to the root cap, the epidermis, and the phloem. A parallelism was apparent between the sequential morphological development of the apparatus for the secretion of a polysaccharide product, the fairly direct incorporation of tritiated glucose into the apparatus to become a component of this product and the develop- ment of the enzyme reactivity. Acid phosphatase, generally accepted as a lysosomal marker, was found in association with the Golgi apparatus in only a few cell types near the apex of the root. The localization was usually in a single cisterna at the face of the apparatus toward which the production of secretory vesicles builds up and associated regions of what may be smooth endoplasmic reticulum. Since the cell types involved were limited regions of the cap and epidermis and some initial cells, no functional correlates of the reactivity were apparent. Despite the presence of this lysosomal marker, no structures clearly identifiable as ' lysosomes' were found and the lack of reaction specificity in the vacuoles did not allow them to be so defined. -
Membrane Transport, Absorption and Distribution of Drugs
Chapter 2 1 Pharmacokinetics: Membrane Transport, Absorption and Distribution of Drugs Pharmacokinetics is the quantitative study of drug movement in, through and out of the body. The overall scheme of pharmacokinetic processes is depicted in Fig. 2.1. The intensity of response is related to concentration of the drug at the site of action, which in turn is dependent on its pharmacokinetic properties. Pharmacokinetic considerations, therefore, determine the route(s) of administration, dose, and latency of onset, time of peak action, duration of action and frequency of administration of a drug. Fig. 2.1: Schematic depiction of pharmacokinetic processes All pharmacokinetic processes involve transport of the drug across biological membranes. Biological membrane This is a bilayer (about 100 Å thick) of phospholipid and cholesterol molecules, the polar groups (glyceryl phosphate attached to ethanolamine/choline or hydroxyl group of cholesterol) of these are oriented at the two surfaces and the nonpolar hydrocarbon chains are embedded in the matrix to form a continuous sheet. This imparts high electrical resistance and relative impermeability to the membrane. Extrinsic and intrinsic protein molecules are adsorbed on the lipid bilayer (Fig. 2.2). Glyco- proteins or glycolipids are formed on the surface by attachment to polymeric sugars, 2 aminosugars or sialic acids. The specific lipid and protein composition of different membranes differs according to the cell or the organelle type. The proteins are able to freely float through the membrane: associate and organize or vice versa. Some of the intrinsic ones, which extend through the full thickness of the membrane, surround fine aqueous pores. CHAPTER2 Fig. -
Vocabulario De Morfoloxía, Anatomía E Citoloxía Veterinaria
Vocabulario de Morfoloxía, anatomía e citoloxía veterinaria (galego-español-inglés) Servizo de Normalización Lingüística Universidade de Santiago de Compostela COLECCIÓN VOCABULARIOS TEMÁTICOS N.º 4 SERVIZO DE NORMALIZACIÓN LINGÜÍSTICA Vocabulario de Morfoloxía, anatomía e citoloxía veterinaria (galego-español-inglés) 2008 UNIVERSIDADE DE SANTIAGO DE COMPOSTELA VOCABULARIO de morfoloxía, anatomía e citoloxía veterinaria : (galego-español- inglés) / coordinador Xusto A. Rodríguez Río, Servizo de Normalización Lingüística ; autores Matilde Lombardero Fernández ... [et al.]. – Santiago de Compostela : Universidade de Santiago de Compostela, Servizo de Publicacións e Intercambio Científico, 2008. – 369 p. ; 21 cm. – (Vocabularios temáticos ; 4). - D.L. C 2458-2008. – ISBN 978-84-9887-018-3 1.Medicina �������������������������������������������������������������������������veterinaria-Diccionarios�������������������������������������������������. 2.Galego (Lingua)-Glosarios, vocabularios, etc. políglotas. I.Lombardero Fernández, Matilde. II.Rodríguez Rio, Xusto A. coord. III. Universidade de Santiago de Compostela. Servizo de Normalización Lingüística, coord. IV.Universidade de Santiago de Compostela. Servizo de Publicacións e Intercambio Científico, ed. V.Serie. 591.4(038)=699=60=20 Coordinador Xusto A. Rodríguez Río (Área de Terminoloxía. Servizo de Normalización Lingüística. Universidade de Santiago de Compostela) Autoras/res Matilde Lombardero Fernández (doutora en Veterinaria e profesora do Departamento de Anatomía e Produción Animal. -
IB DIPLOMA PROGRAMME Debora M
OXFORD IB PREPARED BIOLOGY IB DIPLOMA PROGRAMME Debora M. Primrose Contents Introduction iv 9 Plant biology (AHL) 1 Cell biology 9.1 Transport in the xylem of plants 103 9.2 Transport in the phloem of plants 107 1.1 Introduction to cells 2 9.3 Growth in plants 110 1.2 Ultrastructure of cells 4 9.4 Reproduction in plants 113 1.3 Membrane structure 6 1.4 Membrane transport 7 10 Genetics and evolution (AHL) 1.5 The origin of cells 9 10.1 Meiosis 117 1.6 Cell division 11 10.2 Inheritance 121 2 Molecular biology 10.3 Gene pools and speciation 125 2.1 Molecules to metabolism 14 11 Animal physiology (AHL) 2.2 Water 15 11.1 Antibody production and vaccination 128 2.3 Carbohydrates and lipids 16 11.2 Movement 133 2.4 Proteins 20 11.3 The kidney and osmoregulation 137 2.5 Enzymes 21 11.4 Sexual reproduction 141 2.6 Structure of DNA and RNA 23 2.7 DNA replication, transcription and translation 24 12 Data-based and practical questions 147 2.8 Cell respiration 26 2.9 Photosynthesis 28 A Neurobiology and behaviour 3 Genetics A.1 Neural development 157 A.2 The human brain 159 3.1 Genes 30 A.3 Perception of stimuli 161 3.2 Chromosomes 32 A.4 Innate and learned behaviour (AHL) 165 3.3 Meiosis 33 A.5 Neuropharmacology (AHL) 167 3.4 Inheritance 35 A.6 Ethology (AHL) 169 3.5 Genetic modification and biotechnology 37 B Biotechnology and bioinformatics 4 Ecology B.1 Microbiology: organisms in industry 172 4.1 Species, communities and ecosystems 40 B.2 Biotechnology in agriculture 174 4.2 Energy flow 43 B.3 Environmental protection 178 4.3 Carbon cycling 45 -
Predicting Protein-Membrane Interfaces of Peripheral Membrane
bioRxiv preprint doi: https://doi.org/10.1101/2021.06.28.450157; this version posted June 29, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Predicting protein-membrane interfaces of pe- ripheral membrane proteins using ensemble machine learning Alexios Chatzigoulas1,2,* and Zoe Cournia1,* 1Biomedical Research Foundation, Academy of Athens, 4 Soranou Ephessiou, 11527 Athens, Greece, 2Depart- ment of Informatics and Telecommunications, National and Kapodistrian University of Athens, 15784 Athens, Greece *To whom correspondence should be addressed. Abstract Motivation: Abnormal protein-membrane attachment is involved in deregulated cellular pathways and in disease. Therefore, the possibility to modulate protein-membrane interactions represents a new promising therapeutic strategy for peripheral membrane proteins that have been considered so far undruggable. A major obstacle in this drug design strategy is that the membrane binding domains of peripheral membrane proteins are usually not known. The development of fast and efficient algorithms predicting the protein-membrane interface would shed light into the accessibility of membrane-protein interfaces by drug-like molecules. Results: Herein, we describe an ensemble machine learning methodology and algorithm for predicting membrane-penetrating residues. We utilize available experimental data in the literature for training 21 machine learning classifiers and a voting classifier. Evaluation of the ensemble classifier accuracy pro- duced a macro-averaged F1 score = 0.92 and an MCC = 0.84 for predicting correctly membrane-pen- etrating residues on unknown proteins of an independent test set. -
Role of Cholesterol in Lipid Raft Formation: Lessons from Lipid Model Systems
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Biochimica et Biophysica Acta 1610 (2003) 174–183 www.bba-direct.com Review Role of cholesterol in lipid raft formation: lessons from lipid model systems John R. Silvius* Department of Biochemistry, McGill University, Montre´al, Que´bec, Canada H3G 1Y6 Received 21 March 2002; accepted 16 October 2002 Abstract Biochemical and cell-biological experiments have identified cholesterol as an important component of lipid ‘rafts’ and related structures (e.g., caveolae) in mammalian cell membranes, and membrane cholesterol levels as a key factor in determining raft stability and organization. Studies using cholesterol-containing bilayers as model systems have provided important insights into the roles that cholesterol plays in determining lipid raft behavior. This review will discuss recent progress in understanding two aspects of lipid–cholesterol interactions that are particularly relevant to understanding the formation and properties of lipid rafts. First, we will consider evidence that cholesterol interacts differentially with different membrane lipids, associating particularly strongly with saturated, high-melting phospho- and sphingolipids and particularly weakly with highly unsaturated lipid species. Second, we will review recent progress in reconstituting and directly observing segregated raft-like (liquid-ordered) domains in model membranes that mimic the lipid compositions of natural membranes incorporating raft domains. D 2003 Elsevier Science B.V. All rights reserved. Keywords: Sterol; Phospholipid; Sphingolipid; Lipid bilayer; Lipid monolayer; Membrane domain 1. Introduction Two major observations suggest that cholesterol–lipid interactions play an important role in the formation of rafts Cholesterol–lipid interactions have long been recognized in animal cell membranes.