1 Contrasting Implications of the Frequentist and Bayesian
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Bayesian Versus Frequentist Statistics for Uncertainty Analysis
- 1 - Disentangling Classical and Bayesian Approaches to Uncertainty Analysis Robin Willink1 and Rod White2 1email: [email protected] 2Measurement Standards Laboratory PO Box 31310, Lower Hutt 5040 New Zealand email(corresponding author): [email protected] Abstract Since the 1980s, we have seen a gradual shift in the uncertainty analyses recommended in the metrological literature, principally Metrologia, and in the BIPM’s guidance documents; the Guide to the Expression of Uncertainty in Measurement (GUM) and its two supplements. The shift has seen the BIPM’s recommendations change from a purely classical or frequentist analysis to a purely Bayesian analysis. Despite this drift, most metrologists continue to use the predominantly frequentist approach of the GUM and wonder what the differences are, why there are such bitter disputes about the two approaches, and should I change? The primary purpose of this note is to inform metrologists of the differences between the frequentist and Bayesian approaches and the consequences of those differences. It is often claimed that a Bayesian approach is philosophically consistent and is able to tackle problems beyond the reach of classical statistics. However, while the philosophical consistency of the of Bayesian analyses may be more aesthetically pleasing, the value to science of any statistical analysis is in the long-term success rates and on this point, classical methods perform well and Bayesian analyses can perform poorly. Thus an important secondary purpose of this note is to highlight some of the weaknesses of the Bayesian approach. We argue that moving away from well-established, easily- taught frequentist methods that perform well, to computationally expensive and numerically inferior Bayesian analyses recommended by the GUM supplements is ill-advised. -
Practical Statistics for Particle Physics Lecture 1 AEPS2018, Quy Nhon, Vietnam
Practical Statistics for Particle Physics Lecture 1 AEPS2018, Quy Nhon, Vietnam Roger Barlow The University of Huddersfield August 2018 Roger Barlow ( Huddersfield) Statistics for Particle Physics August 2018 1 / 34 Lecture 1: The Basics 1 Probability What is it? Frequentist Probability Conditional Probability and Bayes' Theorem Bayesian Probability 2 Probability distributions and their properties Expectation Values Binomial, Poisson and Gaussian 3 Hypothesis testing Roger Barlow ( Huddersfield) Statistics for Particle Physics August 2018 2 / 34 Question: What is Probability? Typical exam question Q1 Explain what is meant by the Probability PA of an event A [1] Roger Barlow ( Huddersfield) Statistics for Particle Physics August 2018 3 / 34 Four possible answers PA is number obeying certain mathematical rules. PA is a property of A that determines how often A happens For N trials in which A occurs NA times, PA is the limit of NA=N for large N PA is my belief that A will happen, measurable by seeing what odds I will accept in a bet. Roger Barlow ( Huddersfield) Statistics for Particle Physics August 2018 4 / 34 Mathematical Kolmogorov Axioms: For all A ⊂ S PA ≥ 0 PS = 1 P(A[B) = PA + PB if A \ B = ϕ and A; B ⊂ S From these simple axioms a complete and complicated structure can be − ≤ erected. E.g. show PA = 1 PA, and show PA 1.... But!!! This says nothing about what PA actually means. Kolmogorov had frequentist probability in mind, but these axioms apply to any definition. Roger Barlow ( Huddersfield) Statistics for Particle Physics August 2018 5 / 34 Classical or Real probability Evolved during the 18th-19th century Developed (Pascal, Laplace and others) to serve the gambling industry. -
This History of Modern Mathematical Statistics Retraces Their Development
BOOK REVIEWS GORROOCHURN Prakash, 2016, Classic Topics on the History of Modern Mathematical Statistics: From Laplace to More Recent Times, Hoboken, NJ, John Wiley & Sons, Inc., 754 p. This history of modern mathematical statistics retraces their development from the “Laplacean revolution,” as the author so rightly calls it (though the beginnings are to be found in Bayes’ 1763 essay(1)), through the mid-twentieth century and Fisher’s major contribution. Up to the nineteenth century the book covers the same ground as Stigler’s history of statistics(2), though with notable differences (see infra). It then discusses developments through the first half of the twentieth century: Fisher’s synthesis but also the renewal of Bayesian methods, which implied a return to Laplace. Part I offers an in-depth, chronological account of Laplace’s approach to probability, with all the mathematical detail and deductions he drew from it. It begins with his first innovative articles and concludes with his philosophical synthesis showing that all fields of human knowledge are connected to the theory of probabilities. Here Gorrouchurn raises a problem that Stigler does not, that of induction (pp. 102-113), a notion that gives us a better understanding of probability according to Laplace. The term induction has two meanings, the first put forward by Bacon(3) in 1620, the second by Hume(4) in 1748. Gorroochurn discusses only the second. For Bacon, induction meant discovering the principles of a system by studying its properties through observation and experimentation. For Hume, induction was mere enumeration and could not lead to certainty. Laplace followed Bacon: “The surest method which can guide us in the search for truth, consists in rising by induction from phenomena to laws and from laws to forces”(5). -
Statistical Modelling
Statistical Modelling Dave Woods and Antony Overstall (Chapters 1–2 closely based on original notes by Anthony Davison and Jon Forster) c 2016 StatisticalModelling ............................... ......................... 0 1. Model Selection 1 Overview............................................ .................. 2 Basic Ideas 3 Whymodel?.......................................... .................. 4 Criteriaformodelselection............................ ...................... 5 Motivation......................................... .................... 6 Setting ............................................ ................... 9 Logisticregression................................... .................... 10 Nodalinvolvement................................... .................... 11 Loglikelihood...................................... .................... 14 Wrongmodel.......................................... ................ 15 Out-of-sampleprediction ............................. ..................... 17 Informationcriteria................................... ................... 18 Nodalinvolvement................................... .................... 20 Theoreticalaspects.................................. .................... 21 PropertiesofAIC,NIC,BIC............................... ................. 22 Linear Model 23 Variableselection ................................... .................... 24 Stepwisemethods.................................... ................... 25 Nuclearpowerstationdata............................ .................... -
The Likelihood Principle
1 01/28/99 ãMarc Nerlove 1999 Chapter 1: The Likelihood Principle "What has now appeared is that the mathematical concept of probability is ... inadequate to express our mental confidence or diffidence in making ... inferences, and that the mathematical quantity which usually appears to be appropriate for measuring our order of preference among different possible populations does not in fact obey the laws of probability. To distinguish it from probability, I have used the term 'Likelihood' to designate this quantity; since both the words 'likelihood' and 'probability' are loosely used in common speech to cover both kinds of relationship." R. A. Fisher, Statistical Methods for Research Workers, 1925. "What we can find from a sample is the likelihood of any particular value of r [a parameter], if we define the likelihood as a quantity proportional to the probability that, from a particular population having that particular value of r, a sample having the observed value r [a statistic] should be obtained. So defined, probability and likelihood are quantities of an entirely different nature." R. A. Fisher, "On the 'Probable Error' of a Coefficient of Correlation Deduced from a Small Sample," Metron, 1:3-32, 1921. Introduction The likelihood principle as stated by Edwards (1972, p. 30) is that Within the framework of a statistical model, all the information which the data provide concerning the relative merits of two hypotheses is contained in the likelihood ratio of those hypotheses on the data. ...For a continuum of hypotheses, this principle -
People's Intuitions About Randomness and Probability
20 PEOPLE’S INTUITIONS ABOUT RANDOMNESS AND PROBABILITY: AN EMPIRICAL STUDY4 MARIE-PAULE LECOUTRE ERIS, Université de Rouen [email protected] KATIA ROVIRA Laboratoire Psy.Co, Université de Rouen [email protected] BRUNO LECOUTRE ERIS, C.N.R.S. et Université de Rouen [email protected] JACQUES POITEVINEAU ERIS, Université de Paris 6 et Ministère de la Culture [email protected] ABSTRACT What people mean by randomness should be taken into account when teaching statistical inference. This experiment explored subjective beliefs about randomness and probability through two successive tasks. Subjects were asked to categorize 16 familiar items: 8 real items from everyday life experiences, and 8 stochastic items involving a repeatable process. Three groups of subjects differing according to their background knowledge of probability theory were compared. An important finding is that the arguments used to judge if an event is random and those to judge if it is not random appear to be of different natures. While the concept of probability has been introduced to formalize randomness, a majority of individuals appeared to consider probability as a primary concept. Keywords: Statistics education research; Probability; Randomness; Bayesian Inference 1. INTRODUCTION In recent years Bayesian statistical practice has considerably evolved. Nowadays, the frequentist approach is increasingly challenged among scientists by the Bayesian proponents (see e.g., D’Agostini, 2000; Lecoutre, Lecoutre & Poitevineau, 2001; Jaynes, 2003). In applied statistics, “objective Bayesian techniques” (Berger, 2004) are now a promising alternative to the traditional frequentist statistical inference procedures (significance tests and confidence intervals). Subjective Bayesian analysis also has a role to play in scientific investigations (see e.g., Kadane, 1996). -
Introduction to Bayesian Estimation
Introduction to Bayesian Estimation March 2, 2016 The Plan 1. What is Bayesian statistics? How is it different from frequentist methods? 2. 4 Bayesian Principles 3. Overview of main concepts in Bayesian analysis Main reading: Ch.1 in Gary Koop's Bayesian Econometrics Additional material: Christian P. Robert's The Bayesian Choice: From decision theoretic foundations to Computational Implementation Gelman, Carlin, Stern, Dunson, Wehtari and Rubin's Bayesian Data Analysis Probability and statistics; What's the difference? Probability is a branch of mathematics I There is little disagreement about whether the theorems follow from the axioms Statistics is an inversion problem: What is a good probabilistic description of the world, given the observed outcomes? I There is some disagreement about how we interpret data/observations and how we make inference about unobservable parameters Why probabilistic models? Is the world characterized by randomness? I Is the weather random? I Is a coin flip random? I ECB interest rates? It is difficult to say with certainty whether something is \truly" random. Two schools of statistics What is the meaning of probability, randomness and uncertainty? Two main schools of thought: I The classical (or frequentist) view is that probability corresponds to the frequency of occurrence in repeated experiments I The Bayesian view is that probabilities are statements about our state of knowledge, i.e. a subjective view. The difference has implications for how we interpret estimated statistical models and there is no general -
Hybrid of Naive Bayes and Gaussian Naive Bayes for Classification: a Map Reduce Approach
International Journal of Innovative Technology and Exploring Engineering (IJITEE) ISSN: 2278-3075, Volume-8, Issue-6S3, April 2019 Hybrid of Naive Bayes and Gaussian Naive Bayes for Classification: A Map Reduce Approach Shikha Agarwal, Balmukumd Jha, Tisu Kumar, Manish Kumar, Prabhat Ranjan Abstract: Naive Bayes classifier is well known machine model could be used without accepting Bayesian probability learning algorithm which has shown virtues in many fields. In or using any Bayesian methods. Despite their naive design this work big data analysis platforms like Hadoop distributed and simple assumptions, Naive Bayes classifiers have computing and map reduce programming is used with Naive worked quite well in many complex situations. An analysis Bayes and Gaussian Naive Bayes for classification. Naive Bayes is manily popular for classification of discrete data sets while of the Bayesian classification problem showed that there are Gaussian is used to classify data that has continuous attributes. sound theoretical reasons behind the apparently implausible Experimental results show that Hybrid of Naive Bayes and efficacy of types of classifiers[5]. A comprehensive Gaussian Naive Bayes MapReduce model shows the better comparison with other classification algorithms in 2006 performance in terms of classification accuracy on adult data set showed that Bayes classification is outperformed by other which has many continuous attributes. approaches, such as boosted trees or random forests [6]. An Index Terms: Naive Bayes, Gaussian Naive Bayes, Map Reduce, Classification. advantage of Naive Bayes is that it only requires a small number of training data to estimate the parameters necessary I. INTRODUCTION for classification. The fundamental property of Naive Bayes is that it works on discrete value. -
The Interplay of Bayesian and Frequentist Analysis M.J.Bayarriandj.O.Berger
Statistical Science 2004, Vol. 19, No. 1, 58–80 DOI 10.1214/088342304000000116 © Institute of Mathematical Statistics, 2004 The Interplay of Bayesian and Frequentist Analysis M.J.BayarriandJ.O.Berger Abstract. Statistics has struggled for nearly a century over the issue of whether the Bayesian or frequentist paradigm is superior. This debate is far from over and, indeed, should continue, since there are fundamental philosophical and pedagogical issues at stake. At the methodological level, however, the debate has become considerably muted, with the recognition that each approach has a great deal to contribute to statistical practice and each is actually essential for full development of the other approach. In this article, we embark upon a rather idiosyncratic walk through some of these issues. Key words and phrases: Admissibility, Bayesian model checking, condi- tional frequentist, confidence intervals, consistency, coverage, design, hierar- chical models, nonparametric Bayes, objective Bayesian methods, p-values, reference priors, testing. CONTENTS 5. Areas of current disagreement 6. Conclusions 1. Introduction Acknowledgments 2. Inherently joint Bayesian–frequentist situations References 2.1. Design or preposterior analysis 2.2. The meaning of frequentism 2.3. Empirical Bayes, gamma minimax, restricted risk 1. INTRODUCTION Bayes Statisticians should readily use both Bayesian and 3. Estimation and confidence intervals frequentist ideas. In Section 2 we discuss situations 3.1. Computation with hierarchical, multilevel or mixed in which simultaneous frequentist and Bayesian think- model analysis ing is essentially required. For the most part, how- 3.2. Assessment of accuracy of estimation ever, the situations we discuss are situations in which 3.3. Foundations, minimaxity and exchangeability 3.4. -
Adjusted Probability Naive Bayesian Induction
Adjusted Probability Naive Bayesian Induction 1 2 Geo rey I. Webb and Michael J. Pazzani 1 Scho ol of Computing and Mathematics Deakin University Geelong, Vic, 3217, Australia. 2 Department of Information and Computer Science University of California, Irvine Irvine, Ca, 92717, USA. Abstract. NaiveBayesian classi ers utilise a simple mathematical mo del for induction. While it is known that the assumptions on which this mo del is based are frequently violated, the predictive accuracy obtained in discriminate classi cation tasks is surprisingly comp etitive in compar- ison to more complex induction techniques. Adjusted probability naive Bayesian induction adds a simple extension to the naiveBayesian clas- si er. A numeric weight is inferred for each class. During discriminate classi cation, the naiveBayesian probability of a class is multiplied by its weight to obtain an adjusted value. The use of this adjusted value in place of the naiveBayesian probabilityisshown to signi cantly improve predictive accuracy. 1 Intro duction The naiveBayesian classi er Duda & Hart, 1973 provides a simple approachto discriminate classi cation learning that has demonstrated comp etitive predictive accuracy on a range of learning tasks Clark & Niblett, 1989; Langley,P., Iba, W., & Thompson, 1992. The naiveBayesian classi er is also attractive as it has an explicit and sound theoretical basis which guarantees optimal induction given a set of explicit assumptions. There is a drawback, however, in that it is known that some of these assumptions will b e violated in many induction scenarios. In particular, one key assumption that is frequently violated is that the attributes are indep endent with resp ect to the class variable. -
Frequentism-As-Model
Frequentism-as-model Christian Hennig, Dipartimento di Scienze Statistiche, Universita die Bologna, Via delle Belle Arti, 41, 40126 Bologna [email protected] July 14, 2020 Abstract: Most statisticians are aware that probability models interpreted in a frequentist manner are not really true in objective reality, but only idealisations. I argue that this is often ignored when actually applying frequentist methods and interpreting the results, and that keeping up the awareness for the essential difference between reality and models can lead to a more appropriate use and in- terpretation of frequentist models and methods, called frequentism-as-model. This is elaborated showing connections to existing work, appreciating the special role of i.i.d. models and subject matter knowledge, giving an account of how and under what conditions models that are not true can be useful, giving detailed interpreta- tions of tests and confidence intervals, confronting their implicit compatibility logic with the inverse probability logic of Bayesian inference, re-interpreting the role of model assumptions, appreciating robustness, and the role of “interpretative equiv- alence” of models. Epistemic (often referred to as Bayesian) probability shares the issue that its models are only idealisations and not really true for modelling reasoning about uncertainty, meaning that it does not have an essential advantage over frequentism, as is often claimed. Bayesian statistics can be combined with frequentism-as-model, leading to what Gelman and Hennig (2017) call “falsifica- arXiv:2007.05748v1 [stat.OT] 11 Jul 2020 tionist Bayes”. Key Words: foundations of statistics, Bayesian statistics, interpretational equiv- alence, compatibility logic, inverse probability logic, misspecification testing, sta- bility, robustness 1 Introduction The frequentist interpretation of probability and frequentist inference such as hy- pothesis tests and confidence intervals have been strongly criticised recently (e.g., Hajek (2009); Diaconis and Skyrms (2018); Wasserstein et al. -
The P–T Probability Framework for Semantic Communication, Falsification, Confirmation, and Bayesian Reasoning
philosophies Article The P–T Probability Framework for Semantic Communication, Falsification, Confirmation, and Bayesian Reasoning Chenguang Lu School of Computer Engineering and Applied Mathematics, Changsha University, Changsha 410003, China; [email protected] Received: 8 July 2020; Accepted: 16 September 2020; Published: 2 October 2020 Abstract: Many researchers want to unify probability and logic by defining logical probability or probabilistic logic reasonably. This paper tries to unify statistics and logic so that we can use both statistical probability and logical probability at the same time. For this purpose, this paper proposes the P–T probability framework, which is assembled with Shannon’s statistical probability framework for communication, Kolmogorov’s probability axioms for logical probability, and Zadeh’s membership functions used as truth functions. Two kinds of probabilities are connected by an extended Bayes’ theorem, with which we can convert a likelihood function and a truth function from one to another. Hence, we can train truth functions (in logic) by sampling distributions (in statistics). This probability framework was developed in the author’s long-term studies on semantic information, statistical learning, and color vision. This paper first proposes the P–T probability framework and explains different probabilities in it by its applications to semantic information theory. Then, this framework and the semantic information methods are applied to statistical learning, statistical mechanics, hypothesis evaluation (including falsification), confirmation, and Bayesian reasoning. Theoretical applications illustrate the reasonability and practicability of this framework. This framework is helpful for interpretable AI. To interpret neural networks, we need further study. Keywords: statistical probability; logical probability; semantic information; rate-distortion; Boltzmann distribution; falsification; verisimilitude; confirmation measure; Raven Paradox; Bayesian reasoning 1.