Exploration of Algal Varieties from Panikhaiti Area of Guwahati Using Winogradsky Column
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Efficient Microscale Screening of Various Haematococcus Pluvialis Strains for Growth and Astaxanthin Production
Efficient microscale screening of various Haematococcus pluvialis strains for growth and astaxanthin production Inaugural-Dissertation zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Universität zu Köln vorgelegt von Zehra Çebi aus Köln Köln, 2017 Berichterstatter: Prof. Dr. Michael Melkonian (Gutachter) Prof Dr. Burkhard Becker Tag der mündlichen Prüfung: 23.01.2017 3 Zusammenfassung Das Ketocarotenoid Astaxanthin wird in der Natur von einigen Algen, Pflanzen, Pilzen und Bakterien synthetisiert. Hierbei besitzt die Grünalge Haematococcus pluvialis mit bis zu 4% des Trockengewichtes die höchste Kapazität Astaxanthin zu akkumulieren. Kommerziell wird natürliches Astaxanthin aus H. pluvialis als pharmazeutisch-funktionelles Lebensmittel für den Menschen und hauptsächlich als Färbemittel in der Aquakultur verwendet. Aufgrund hoher Produktionskosten von natürlichem Astaxanthin aus H. pluvialis wird der kommerzielle Astaxanthinmarkt von dem synthetischen Analogon dominiert. Da jedoch die Nachfrage für natürliches Astaxanthin stetig steigt, laufen die Bestrebungen zur Verbesserung von Massenkultursystemen für H. pluvialis, insbesondere auf technischer Ebene, auf Hochtouren, um die Produktionskosten zu senken und damit die Konkurrenzfähigkeit von natürlichem Astaxanthin auf dem Carotenoidmarkt zu erhöhen. Der Fokus dieser Doktorarbeit liegt auf der Verbesserung der H. pluvialis Produktivität auf biologischer Ebene, nämlich durch Selektion und genetische Manipulation eines effizienten H. pluvialis Stammes. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
And Macro-Algae: Utility for Industrial Applications
MICRO- AND MACRO-ALGAE: UTILITY FOR INDUSTRIAL APPLICATIONS Outputs from the EPOBIO project September 2007 Prepared by Anders S Carlsson, Jan B van Beilen, Ralf Möller and David Clayton Editor: Dianna Bowles cplpressScience Publishers EPOBIO: Realising the Economic Potential of Sustainable Resources - Bioproducts from Non-food Crops © September 2007, CNAP, University of York EPOBIO is supported by the European Commission under the Sixth RTD Framework Programme Specific Support Action SSPE-CT-2005-022681 together with the United States Department of Agriculture. Legal notice: Neither the University of York nor the European Commission nor any person acting on their behalf may be held responsible for the use to which information contained in this publication may be put, nor for any errors that may appear despite careful preparation and checking. The opinions expressed do not necessarily reflect the views of the University of York, nor the European Commission. Non-commercial reproduction is authorized, provided the source is acknowledged. Published by: CPL Press, Tall Gables, The Sydings, Speen, Newbury, Berks RG14 1RZ, UK Tel: +44 1635 292443 Fax: +44 1635 862131 Email: [email protected] Website: www.cplbookshop.com ISBN 13: 978-1-872691-29-9 Printed in the UK by Antony Rowe Ltd, Chippenham CONTENTS 1 INTRODUCTION 1 2 HABITATS AND PRODUCTION SYSTEMS 4 2.1 Definition of terms 4 2.2 Macro-algae 5 2.2.1 Habitats for red, green and brown macro-algae 5 2.2.2 Production systems 6 2.3 Micro-algae 9 2.3.1 Applications of micro-algae 9 2.3.2 Production -
The Symbiotic Green Algae, Oophila (Chlamydomonadales
University of Connecticut OpenCommons@UConn Master's Theses University of Connecticut Graduate School 12-16-2016 The yS mbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History Nikolaus Schultz University of Connecticut - Storrs, [email protected] Recommended Citation Schultz, Nikolaus, "The yS mbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History" (2016). Master's Theses. 1035. https://opencommons.uconn.edu/gs_theses/1035 This work is brought to you for free and open access by the University of Connecticut Graduate School at OpenCommons@UConn. It has been accepted for inclusion in Master's Theses by an authorized administrator of OpenCommons@UConn. For more information, please contact [email protected]. The Symbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History Nikolaus Eduard Schultz B.A., Trinity College, 2014 A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science at the University of Connecticut 2016 Copyright by Nikolaus Eduard Schultz 2016 ii ACKNOWLEDGEMENTS This thesis was made possible through the guidance, teachings and support of numerous individuals in my life. First and foremost, Louise Lewis deserves recognition for her tremendous efforts in making this work possible. She has performed pioneering work on this algal system and is one of the preeminent phycologists of our time. She has spent hundreds of hours of her time mentoring and teaching me invaluable skills. For this and so much more, I am very appreciative and humbled to have worked with her. Thank you Louise! To my committee members, Kurt Schwenk and David Wagner, thank you for your mentorship and guidance. -
Surfactant-Aided Dispersed Air Flotation As a Harvesting and Pre-Extraction Treatment for Chlorella Saccharophila
SURFACTANT-AIDED DISPERSED AIR FLOTATION AS A HARVESTING AND PRE-EXTRACTION TREATMENT FOR CHLORELLA SACCHAROPHILA by Mariam Alhattab Submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy at Dalhousie University Halifax, Nova Scotia August 2018 © Copyright by Mariam Alhattab, 2018 DEDICATION I dedicate this thesis to my parents, Tayser and Manal Alhattab, my brothers (Mohammed, Ahmed, and Mahmoud), my husband (Ismail Alghalayini), my niece (Minu), and my friends (Farah Hamodat and Halah Shahin). Without their support, patience and love, the completion of this work would not have been possible. ii TABLE OF CONTENTS List of Tables ................................................................................................................... viii List of Figures .................................................................................................................... xi Abstract ...................................................................................................................... xiii List of Abbreviations Used .............................................................................................. xiv Acknowledgements .......................................................................................................... xvi Chapter 1 Introduction ......................................................................................................1 Chapter 2 Literature Review .............................................................................................6 -
Chilling Out: the Evolution and Diversification of Psychrophilic Algae with a Focus on Chlamydomonadales
Polar Biol (2017) 40:1169–1184 DOI 10.1007/s00300-016-2045-4 REVIEW Chilling out: the evolution and diversification of psychrophilic algae with a focus on Chlamydomonadales 1 1 1 Marina Cvetkovska • Norman P. A. Hu¨ner • David Roy Smith Received: 20 February 2016 / Revised: 20 July 2016 / Accepted: 10 October 2016 / Published online: 21 October 2016 Ó Springer-Verlag Berlin Heidelberg 2016 Abstract The Earth is a cold place. Most of it exists at or Introduction below the freezing point of water. Although seemingly inhospitable, such extreme environments can harbour a Almost 80 % of the Earth’s biosphere is permanently variety of organisms, including psychrophiles, which can below 5 °C, including most of the oceans, the polar, and withstand intense cold and by definition cannot survive at alpine regions (Feller and Gerday 2003). These seemingly more moderate temperatures. Eukaryotic algae often inhospitable places are some of the least studied but most dominate and form the base of the food web in cold important ecosystems on the planet. They contain a huge environments. Consequently, they are ideal systems for diversity of prokaryotic and eukaryotic organisms, many of investigating the evolution, physiology, and biochemistry which are permanently adapted to the cold (psychrophiles) of photosynthesis under frigid conditions, which has (Margesin et al. 2007). The environmental conditions in implications for the origins of life, exobiology, and climate such habitats severely limit the spread of terrestrial plants, change. Here, we explore the evolution and diversification and therefore, primary production in perpetually cold of photosynthetic eukaryotes in permanently cold climates. environments is largely dependent on microbes. -
Chloroplast Phylogenomic Analysis of Chlorophyte Green Algae Identifies a Novel Lineage Sister to the Sphaeropleales (Chlorophyceae) Claude Lemieux*, Antony T
Lemieux et al. BMC Evolutionary Biology (2015) 15:264 DOI 10.1186/s12862-015-0544-5 RESEARCHARTICLE Open Access Chloroplast phylogenomic analysis of chlorophyte green algae identifies a novel lineage sister to the Sphaeropleales (Chlorophyceae) Claude Lemieux*, Antony T. Vincent, Aurélie Labarre, Christian Otis and Monique Turmel Abstract Background: The class Chlorophyceae (Chlorophyta) includes morphologically and ecologically diverse green algae. Most of the documented species belong to the clade formed by the Chlamydomonadales (also called Volvocales) and Sphaeropleales. Although studies based on the nuclear 18S rRNA gene or a few combined genes have shed light on the diversity and phylogenetic structure of the Chlamydomonadales, the positions of many of the monophyletic groups identified remain uncertain. Here, we used a chloroplast phylogenomic approach to delineate the relationships among these lineages. Results: To generate the analyzed amino acid and nucleotide data sets, we sequenced the chloroplast DNAs (cpDNAs) of 24 chlorophycean taxa; these included representatives from 16 of the 21 primary clades previously recognized in the Chlamydomonadales, two taxa from a coccoid lineage (Jenufa) that was suspected to be sister to the Golenkiniaceae, and two sphaeroplealeans. Using Bayesian and/or maximum likelihood inference methods, we analyzed an amino acid data set that was assembled from 69 cpDNA-encoded proteins of 73 core chlorophyte (including 33 chlorophyceans), as well as two nucleotide data sets that were generated from the 69 genes coding for these proteins and 29 RNA-coding genes. The protein and gene phylogenies were congruent and robustly resolved the branching order of most of the investigated lineages. Within the Chlamydomonadales, 22 taxa formed an assemblage of five major clades/lineages. -
Engineering Astaxanthin Biosynthesis by Intragenic Pseudogene Revival in Chlamydomonas Reinhardtii
bioRxiv preprint doi: https://doi.org/10.1101/535989; this version posted January 31, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Turning a green alga red: engineering astaxanthin biosynthesis by intragenic pseudogene revival in Chlamydomonas reinhardtii. Federico Perozeni1, Stefano Cazzaniga1, Thomas Baier2, Francesca Zanoni1, Gianni Zoccatelli1, Kyle J. Lauersen2, Lutz Wobbe2, Matteo Ballottari1*. 1 Department of Biotechnology, University of Verona, Strada le Grazie 15, 37134 Verona, Italy 2Bielefeld University, Faculty of Biology, Center for Biotechnology (CeBiTec), Universitätsstrasse 27, 33615, Bielefeld, Germany. *Address for correspondence: Matteo Ballottari, Dipartimento di Biotecnologie, Università di Verona, Strada le Grazie 15, 37134 Verona Italy; Tel: +390458027807; E-mail: [email protected] Summary The green alga Chlamydomonas reinhardtii does not synthesize high-value ketocarotenoids like canthaxanthin and astaxanthin, however, a β-carotene ketolase (CrBKT) can be found in its genome. CrBKT is poorly expressed, contains a long C-terminal extension not found in homologues and likely represents a pseudogene in this alga. Here, we used synthetic re-design of this gene to enable its constitutive overexpression from the nuclear genome of C. reinhardtii. Overexpression of the optimized CrBKT extended native carotenoid biosynthesis to generate ketocarotenoids in the algal host causing noticeable changes the green algal colour to a reddish-brown. We found that up to 50% of native carotenoids could be converted into astaxanthin and more than 70% into other ketocarotenoids by robust CrBKT overexpression. Modification of the carotenoid metabolism did not impair growth or biomass productivity of C. -
Quaeritorhiza Haematococci Is a New Species of Parasitic Chytrid of the Commercially Grown Alga, Haematococcus Pluvialis
Mycologia ISSN: (Print) (Online) Journal homepage: https://www.tandfonline.com/loi/umyc20 Quaeritorhiza haematococci is a new species of parasitic chytrid of the commercially grown alga, Haematococcus pluvialis Joyce E. Longcore , Shan Qin , D. Rabern Simmons & Timothy Y. James To cite this article: Joyce E. Longcore , Shan Qin , D. Rabern Simmons & Timothy Y. James (2020) Quaeritorhizahaematococci is a new species of parasitic chytrid of the commercially grown alga, Haematococcuspluvialis , Mycologia, 112:3, 606-615, DOI: 10.1080/00275514.2020.1730136 To link to this article: https://doi.org/10.1080/00275514.2020.1730136 View supplementary material Published online: 09 Apr 2020. Submit your article to this journal Article views: 90 View related articles View Crossmark data Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=umyc20 MYCOLOGIA 2020, VOL. 112, NO. 3, 606–615 https://doi.org/10.1080/00275514.2020.1730136 Quaeritorhiza haematococci is a new species of parasitic chytrid of the commercially grown alga, Haematococcus pluvialis Joyce E. Longcore a, Shan Qin b, D. Rabern Simmons c, and Timothy Y. James c aSchool of Biology and Ecology, University of Maine, Orono, Maine 04469-5722; bPhycological LLC, Gilbert, Arizona 85297-1977; cDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan 48109-1085 ABSTRACT ARTICLE HISTORY Aquaculture companies grow the green alga Haematococcus pluvialis (Chlorophyta) to extract the Received 28 October 2019 carotenoid astaxanthin to sell, which is used as human and animal dietary supplements. We were Accepted 12 February 2020 requested to identify an unknown pathogen of H. -
4 – RESULTS & Discussion
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS DEPARTAMENTO DE BIOLOGIA VEGETAL Towards improvement of Haematococcus pluvialis cultures by cell sorting and UV mutagenesis Filipa Faria Rosa Mestrado em Microbiologia Aplicada Dissertação orientada por: Doutor Luís Tiago Guerra Professora Doutora Ana Tenreiro 2017 Towards improvement of Haematococcus pluvialis cultures by cell sorting and UV mutagenesis Filipa Faria Rosa 2017 This thesis was fully performed at A4F – Algae for Future and Bugworkers Laboratory | M&B – BioISI | Teclabs under the direct supervision of Doutor Luís Tiago Guerra. Professora Doutora Ana Tenreiro was the internal supervisor in the scope of the Master in Applied Microbiology of the Faculty of Sciences of the University of Lisbon. 4 – RESULTS & DISCUSSION 4 – RESULTS & DISCUSSION ACKNOWLEDGMENTS First of all, I would like to show my gratitude to the administration of A4F – Alga for Future. Not only they gave me the opportunity of carrying out my master thesis but also I was able to work in two laboratories, A4F and Bugworkers Laboratory | M&B – BioISI | Teclabs, thanks to their partnership. It was an exceptional and exclusive experience which I will never forget. I want to thank Dr. Luis Tiago Guerra, my supervisor at A4F, and Professora Doutora Ana Tenreiro, my supervisor at Bugworkers Laboratory | M&B – BioISI | Teclabs. I am especially grateful for all the knowledge and guidance given along the entire thesis, as well as the availability they showed to help whenever I needed. Not least, thank for the advices, patience, trust and other contributions that allowed the improvement of this work. I am thankful to all my A4F’s colleagues, especially the ones from the laboratory, who gave me all their support and most important, provided me great and unforgettable moments in the laboratory. -
Growth of Haematococcus Pluvialis Flotow in Alternative Media L
http://dx.doi.org/10.1590/1519-6984.23013 Original Article Growth of Haematococcus pluvialis Flotow in alternative media L. H. Sipaúba-Tavaresa*, F. A. Berchielli-Moraisa and B. Scardoeli-Truzzia aLimnology and Plankton Production Laboratory, Aquaculture Center, Universidade Estadual Paulista “Júlio de Mesquita Filho” – UNESP, Via de Acesso Prof. Paulo D. Castellane, s/n, CEP 14884-900, Jaboticabal, SP, Brazil *e-mail: [email protected] Received: December 10, 2013 – Accepted: May 22, 2014 – Distributed: November 30, 2015 (With 3 figures) Abstract Current study investigates the effect of two alternative media: NPK (20-5-20) fertilizer and NPK plus macrophyte (M+NPK) compared to the commercial medium (WC) under growth rate and physiological parameters in batch culture mode (2-L), and verifies whether the use of fertilizer (NPK) and macrophyte (Eichhornia crassipes) would be a good tool for Haematococcus pluvialis culture in the laboratory. The highest number of cells of H. pluvialis has been reported in NPK medium (5.4 × 105cells.mL–1) on the 28th day, and in the M+NPK and WC media (4.1 × 105 cells.mL–1 and 2.1 × 105 cells.mL–1) on the 26th day, respectively. Chlorophyll-a contents were significantly higher (p<0.05) in NPK medium (41-102 µg.L–1) and lower in WC and M+NPK media (14-61 µg.L–1). The astaxanthin content was less than 0.04 mg.L–1. Production cost of 10-L of H. pluvialis was low in all media, and NPK and M+NPK media had a cost reduction of 65% and 82%, respectively when compared with commercial medium (WC). -
Of New Zealand Alpine Algae for the Production of Secondary
ISOLATION, CHARACTERISTATION AND SCREENING OF NEW ZEALAND ALPINE ALGAE FOR THE PRODUCTION OF SECONDARY METABOLITES IN PHOTOBIOREACTORS A thesis submitted in fulfilment of the requirements for the Degree of Doctor of Philosophy in Chemical and Process Engineering University of Canterbury By KISHORE GOPALAKRISHNAN Department of Chemical and Process Engineering, University of Canterbury, Christchurch, New Zealand 2015 i DEDICATED TO MY BELOVED FATHER MR GOPALAKRISHNAN SUBRAMANIAN. ii ABSTRACT This inter-disciplinary thesis is concerned with the production of polyunsaturated fatty acids (PUFAs) from newly isolated and identified alpine microalgae, and the optimization of the temperature, photon flux density (PFD), and carbon dioxide (CO2) concentration for their mass production in an airlift photobioreactor (AL-PBR). Thirteen strains of microalgae were isolated from the alpine zone in Canyon Creek, Canterbury, New Zealand. Ten species were characterized by traditional means, including ultrastructure, and subjected to phylogenetic analysis to determine their relationships with other strains. Because alpine algae are exposed to extreme conditions, and such as those that favor the production of secondary metabolites, it was hypothesized that alpine strains could be a productive source of PUFAs. Fatty acid (FA) profiles were generated from seven of the characterized strains and three of the uncharacterized strains. Some taxa from Canyon Creek were already identified from other alpine and polar zones, as well as non-alpine zones. The strains included relatives of species from deserts, one newly published taxon, and two probable new species that await formal naming. All ten distinct species identified were chlorophyte green algae, with three belonging to the class Trebouxiophyceae and seven to the class Chlorophyceae.