SWFSC Archive
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
A Practical Handbook for Determining the Ages of Gulf of Mexico And
A Practical Handbook for Determining the Ages of Gulf of Mexico and Atlantic Coast Fishes THIRD EDITION GSMFC No. 300 NOVEMBER 2020 i Gulf States Marine Fisheries Commission Commissioners and Proxies ALABAMA Senator R.L. “Bret” Allain, II Chris Blankenship, Commissioner State Senator District 21 Alabama Department of Conservation Franklin, Louisiana and Natural Resources John Roussel Montgomery, Alabama Zachary, Louisiana Representative Chris Pringle Mobile, Alabama MISSISSIPPI Chris Nelson Joe Spraggins, Executive Director Bon Secour Fisheries, Inc. Mississippi Department of Marine Bon Secour, Alabama Resources Biloxi, Mississippi FLORIDA Read Hendon Eric Sutton, Executive Director USM/Gulf Coast Research Laboratory Florida Fish and Wildlife Ocean Springs, Mississippi Conservation Commission Tallahassee, Florida TEXAS Representative Jay Trumbull Carter Smith, Executive Director Tallahassee, Florida Texas Parks and Wildlife Department Austin, Texas LOUISIANA Doug Boyd Jack Montoucet, Secretary Boerne, Texas Louisiana Department of Wildlife and Fisheries Baton Rouge, Louisiana GSMFC Staff ASMFC Staff Mr. David M. Donaldson Mr. Bob Beal Executive Director Executive Director Mr. Steven J. VanderKooy Mr. Jeffrey Kipp IJF Program Coordinator Stock Assessment Scientist Ms. Debora McIntyre Dr. Kristen Anstead IJF Staff Assistant Fisheries Scientist ii A Practical Handbook for Determining the Ages of Gulf of Mexico and Atlantic Coast Fishes Third Edition Edited by Steve VanderKooy Jessica Carroll Scott Elzey Jessica Gilmore Jeffrey Kipp Gulf States Marine Fisheries Commission 2404 Government St Ocean Springs, MS 39564 and Atlantic States Marine Fisheries Commission 1050 N. Highland Street Suite 200 A-N Arlington, VA 22201 Publication Number 300 November 2020 A publication of the Gulf States Marine Fisheries Commission pursuant to National Oceanic and Atmospheric Administration Award Number NA15NMF4070076 and NA15NMF4720399. -
Dean Oz/Μ: ;Z: Date
The evolutionary history of reproductive strategies in sculpins of the subfamily oligocottinae Item Type Thesis Authors Buser, Thaddaeus J. Download date 26/09/2021 18:39:58 Link to Item http://hdl.handle.net/11122/4549 THE EVOLUTIONARY HISTORY OF REPRODUCTIVE STRATEGIES IN SCULPINS OF THE SUBFAMILY OLIGOCOTTINAE By Thaddaeus J. Buser RECOMMENDED: Dr. Anne Beaudreau Dr. J. Andres Lopez Advisory Committee Chair Dr. Shannon Atkinson Fisheries Division Graduate Program Chair APPROVED: Dr. Michael Castellini ·. John Eichel erger Dean oZ/µ:_;z: Date THE EVOLUTIONARY HISTORY OF REPRODUCTIVE STRATEGIES IN SCULPINS OF THE SUBFAMILY OLIGOCOTTINAE A THESIS Presented to the Faculty of the University of Alaska Fairbanks in Partial Fulfillment of the Requirements for the Degree of Title Page MASTER OF SCIENCE By Thaddaeus J. Buser, B.Sc. Fairbanks, Alaska May 2014 v Abstract The sculpin subfamily Oligocottinae is a group of 17 nearshore species and is noteworthy for the fact that it contains both intertidal and subtidal species, copulating and non- copulating species, and many species with very broad geographic ranges. These factors, as well as the consistency with which the constituent genera have been grouped together historically, make the Oligocottinae an ideal group for the study of the evolution of a reproductive mode known as internal gamete association (IGA), which is unique to sculpins. I conducted a phylogenetic study of the oligocottine sculpins based on an extensive molecular dataset consisting of DNA sequences from eight genomic regions. From the variability present in those sequences, I inferred phylogenetic relationships using parsimony, maximum likelihood, and Bayesian inference. Results of these phylogenetic analyses show that some historical taxonomy and classifications require revision to align taxonomy with evolutionary relatedness. -
Humboldt Bay Fishes
Humboldt Bay Fishes ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> ·´¯`·._.·´¯`·.. ><((((º>`·._ .·´¯`·. _ .·´¯`·. ><((((º> Acknowledgements The Humboldt Bay Harbor District would like to offer our sincere thanks and appreciation to the authors and photographers who have allowed us to use their work in this report. Photography and Illustrations We would like to thank the photographers and illustrators who have so graciously donated the use of their images for this publication. Andrey Dolgor Dan Gotshall Polar Research Institute of Marine Sea Challengers, Inc. Fisheries And Oceanography [email protected] [email protected] Michael Lanboeuf Milton Love [email protected] Marine Science Institute [email protected] Stephen Metherell Jacques Moreau [email protected] [email protected] Bernd Ueberschaer Clinton Bauder [email protected] [email protected] Fish descriptions contained in this report are from: Froese, R. and Pauly, D. Editors. 2003 FishBase. Worldwide Web electronic publication. http://www.fishbase.org/ 13 August 2003 Photographer Fish Photographer Bauder, Clinton wolf-eel Gotshall, Daniel W scalyhead sculpin Bauder, Clinton blackeye goby Gotshall, Daniel W speckled sanddab Bauder, Clinton spotted cusk-eel Gotshall, Daniel W. bocaccio Bauder, Clinton tube-snout Gotshall, Daniel W. brown rockfish Gotshall, Daniel W. yellowtail rockfish Flescher, Don american shad Gotshall, Daniel W. dover sole Flescher, Don stripped bass Gotshall, Daniel W. pacific sanddab Gotshall, Daniel W. kelp greenling Garcia-Franco, Mauricio louvar -
Stock Status Report 2016
FLOUNDERS – Paralichthyidae Family [link 1] The Pleuronectiformes are characterized by their considerable metamorphosis where from a bilateral symmetry at the larval level ends in juveniles and adults laterally compressed with both eyes on one side of the head. The monophyly of the order is supported by three morphological synapomorphs, the ocular migration during ontogeny, the anterior position of the dorsal fin origin and the presence of an organ that allows the eyes to protrude above the surface of the body. Most species are grouped mainly in the Paralichthyidae family and to a lesser extent in the Pleuronectidae, Achiropsettidae and Cynoglossidae families (Fabré and Díaz de Astarloa, 1996). The family Paralichthyidae, composed of species of high commercial value, is one of the most important fisheries resources exploited in artisanal and demersal fisheries in Argentine and Uruguayan waters (Fabré and Díaz de Astarloa, 1996; Díaz de Astarloa and Munroe, 1998). In the southwest Atlantic Ocean species of Paralichthys occur from northern Brazil 1º N (Carvalho-Filho, 1999; Walsh et al., 2015) to central Patagonia, Argentina at ca. 47ºS (Díaz de Astarloa and Munroe, 1998). Throughout the southwest Atlantic region, species of Paralichthys occur in diverse habitats including coastal shallow-waters in areas containing muddy and silty substrata such as turbid estuaries, and also on sandy substrata in moderate depths on the continental shelf. In addition, some species of Paralichthys like P. isosceles also found on deep-water substrata located on the outer continental shelf. The difficulty in identifying Pleuronectiform species and in particular Paralichthys species has led to different studies on traditional taxonomy (Cousseau and Díaz de Astarloa, 1991; Díaz de Astarloa, 1995a, 1995b, 1996; Díaz de Astarloa and Munroe, 1998; Díaz de Astarloa et al, 2006), external morphology (Díaz de Astarloa 1994) and partial aspects of cranial osteology (Díaz de Astarloa, 1991, 2005, Díaz de Astarloa et.al., 2018). -
A Checklist of the Fishes of the Monterey Bay Area Including Elkhorn Slough, the San Lorenzo, Pajaro and Salinas Rivers
f3/oC-4'( Contributions from the Moss Landing Marine Laboratories No. 26 Technical Publication 72-2 CASUC-MLML-TP-72-02 A CHECKLIST OF THE FISHES OF THE MONTEREY BAY AREA INCLUDING ELKHORN SLOUGH, THE SAN LORENZO, PAJARO AND SALINAS RIVERS by Gary E. Kukowski Sea Grant Research Assistant June 1972 LIBRARY Moss L8ndillg ,\:Jrine Laboratories r. O. Box 223 Moss Landing, Calif. 95039 This study was supported by National Sea Grant Program National Oceanic and Atmospheric Administration United States Department of Commerce - Grant No. 2-35137 to Moss Landing Marine Laboratories of the California State University at Fresno, Hayward, Sacramento, San Francisco, and San Jose Dr. Robert E. Arnal, Coordinator , ·./ "':., - 'I." ~:. 1"-"'00 ~~ ~~ IAbm>~toriesi Technical Publication 72-2: A GI-lliGKL.TST OF THE FISHES OF TtlE MONTEREY my Jl.REA INCLUDING mmORH SLOUGH, THE SAN LCRENZO, PAY-ARO AND SALINAS RIVERS .. 1&let~: Page 14 - A1estria§.·~iligtro1ophua - Stone cockscomb - r-m Page 17 - J:,iparis'W10pus." Ribbon' snailt'ish - HE , ,~ ~Ei 31 - AlectrlQ~iu.e,ctro1OphUfi- 87-B9 . .', . ': ". .' Page 31 - Ceb1diehtlrrs rlolaCewi - 89 , Page 35 - Liparis t!01:f-.e - 89 .Qhange: Page 11 - FmWulns parvipin¢.rl, add: Probable misidentification Page 20 - .BathopWuBt.lemin&, change to: .Mhgghilu§. llemipg+ Page 54 - Ji\mdJ11ui~~ add: Probable. misidentifioation Page 60 - Item. number 67, authOr should be .Hubbs, Clark TABLE OF CONTENTS INTRODUCTION 1 AREA OF COVERAGE 1 METHODS OF LITERATURE SEARCH 2 EXPLANATION OF CHECKLIST 2 ACKNOWLEDGEMENTS 4 TABLE 1 -
COMMON NAME SCIENTIFIC NAME BYCATCH UNIT CV FOOTNOTE(S) Mid-Atlantic Bottom Longline American Lobster Homarus Americanus 35.43 P
TABLE 3.4.2a GREATER ATLANTIC REGION FISH BYCATCH BY FISHERY (2015) Fishery bycatch ratio = bycatch / (bycatch + landings). These fisheries include numerous species with bycatch estimates of 0.00; these 0.00 species are listed in Annexes 1-3 for Table 3.4.2a. All estimates are live weights. 1, 4 COMMON NAME SCIENTIFIC NAME BYCATCH UNIT CV FOOTNOTE(S) Mid-Atlantic Bottom Longline American lobster Homarus americanus 35.43 POUND 1.41 t Gadiformes, other Gadiformes 2,003.72 POUND .51 o, t Jonah crab Cancer borealis 223.42 POUND .67 t Monkfish Lophius americanus 309.83 POUND .49 e, f Night shark Carcharhinus signatus 593.28 POUND .7 t Offshore hake Merluccius albidus 273.33 POUND 1.41 Ray-finned fishes, other (demersal) Actinopterygii 764.63 POUND .64 o, t Red hake Urophycis chuss 313.85 POUND 1.39 k Scorpionfishes, other Scorpaeniformes 10.12 POUND 1.41 o, t Shark, unc Chondrichthyes 508.53 POUND .7 o, t Skate Complex Rajidae 27,670.53 POUND .34 n, o Smooth dogfish Mustelus canis 63,484.98 POUND .68 t Spiny dogfish Squalus acanthias 32,369.85 POUND 1.12 Tilefish Lopholatilus chamaeleonticeps 65.80 POUND 1.41 White hake Urophycis tenuis 51.63 POUND .85 TOTAL FISHERY BYCATCH 129,654.74 POUND TOTAL FISHERY LANDINGS 954,635.64 POUND TOTAL CATCH (Bycatch + Landings) 1,084,290.38 POUND FISHERY BYCATCH RATIO (Bycatch/Total Catch) 0.12 Mid-Atlantic Clam/Quahog Dredge American lobster Homarus americanus 4,853.05 POUND .95 t Atlantic angel shark Squatina dumeril 5,313.55 POUND .96 t Atlantic surfclam Spisula solidissima 184,454.52 POUND .93 Benthic -
Guide to the Coastal Marine Fishes of California
STATE OF CALIFORNIA THE RESOURCES AGENCY DEPARTMENT OF FISH AND GAME FISH BULLETIN 157 GUIDE TO THE COASTAL MARINE FISHES OF CALIFORNIA by DANIEL J. MILLER and ROBERT N. LEA Marine Resources Region 1972 ABSTRACT This is a comprehensive identification guide encompassing all shallow marine fishes within California waters. Geographic range limits, maximum size, depth range, a brief color description, and some meristic counts including, if available: fin ray counts, lateral line pores, lateral line scales, gill rakers, and vertebrae are given. Body proportions and shapes are used in the keys and a state- ment concerning the rarity or commonness in California is given for each species. In all, 554 species are described. Three of these have not been re- corded or confirmed as occurring in California waters but are included since they are apt to appear. The remainder have been recorded as occurring in an area between the Mexican and Oregon borders and offshore to at least 50 miles. Five of California species as yet have not been named or described, and ichthyologists studying these new forms have given information on identification to enable inclusion here. A dichotomous key to 144 families includes an outline figure of a repre- sentative for all but two families. Keys are presented for all larger families, and diagnostic features are pointed out on most of the figures. Illustrations are presented for all but eight species. Of the 554 species, 439 are found primarily in depths less than 400 ft., 48 are meso- or bathypelagic species, and 67 are deepwater bottom dwelling forms rarely taken in less than 400 ft. -
Fishes-Of-The-Salish-Sea-Pp18.Pdf
NOAA Professional Paper NMFS 18 Fishes of the Salish Sea: a compilation and distributional analysis Theodore W. Pietsch James W. Orr September 2015 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce Papers NMFS National Oceanic and Atmospheric Administration Kathryn D. Sullivan Scientifi c Editor Administrator Richard Langton National Marine Fisheries Service National Marine Northeast Fisheries Science Center Fisheries Service Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Offi ce of Science and Technology Fisheries Research and Monitoring Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientifi c Publications Offi ce 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service - The NOAA Professional Paper NMFS (ISSN 1931-4590) series is published by the Scientifi c Publications Offi ce, National Marine Fisheries Service, The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original NOAA, 7600 Sand Point Way NE, research reports, taxonomic keys, species synopses, fl ora and fauna studies, and data- Seattle, WA 98115. intensive reports on investigations in fi shery science, engineering, and economics. The Secretary of Commerce has Copies of the NOAA Professional Paper NMFS series are available free in limited determined that the publication of numbers to government agencies, both federal and state. They are also available in this series is necessary in the transac- exchange for other scientifi c and technical publications in the marine sciences. -
Ichthyoplankton and Station Data for Manta (Surface) Tows Taken on California Cooperative Oceanic Fisheries Investigations Survey Cruises in 1984
.+-..e__.*_ NOMTechnical Memorandum NMFS MAY 2002 ICHTHYOPLANKTON AND STATION DATA FOR MANTA (SURFACE) TOWS TAKEN ON CALIFORNIA COOPERATIVE OCEANIC FISHERIES INVESTIGATIONS SURVEY CRUISES IN 1984 Sharon R. Charter Richard L. Charter H. Geoffrey Moser NOM-TM-NMFS-SWFSC-320 U.S. DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration National Marine Fisheries Service Southwest Fisheries Science Center The National Oceanic and Atmospheric Administration (NOAA), organized in 1970, has evolved into an agency which establishes national policies and manages and conserves our oceanic, coastal, and atmospheric resources. An organizational element within NOAA, the Office of Fisheries is responsible for fisheries policy and the direction of the National Marine Fisheries Service (NMFS). In addition to its formal publications, the NMFS uses the NOAA Technical Memorandum series to issue informal scientific and technical publications when complete formal review and editorial processing are not appropriate or feasible. Documents within this series, however, reflect sound professional work and may be referenced in the formal scientific and technical literature. NOMTechnical Memorandum NMFS This TM senes is used for documentation and timely communicationof preliminary results, interim reports, or special purpose information. The TMs have not received complete formal review, editorial control, or detailed editing. MAY 2002 ICHTHYOPLANKTON AND STATION DATA FOR MANTA (SURFACE) TOWS TAKEN ON CALIFORNIA COOPERATIVE OCEANIC FISHERIES INVESTIGATIONS SURVEY CRUISES IN 1984 Sharon R. Charter, Richard L. Charter, and H. Geoffrey Moser National Oceanic and Atmospheric Administration National Marine Fisheries Service Southwest Fisheries Science Center 8604 La Jolla Shores Drive La Jolla, California, USA 92037 NOM-TM-NMFS-SWFSC-320 U.S. DEPARTMENT OF COMMERCE Donald L. -
Floating Nurseries? Scyphozoan Jellyfish, Their Food and Their Rich Symbiotic Fauna in a Tropical Estuary
Floating nurseries? Scyphozoan jellyfish, their food and their rich symbiotic fauna in a tropical estuary José M. Riascos1, Willington Aguirre2, Charlotte Hopfe3, Diego Morales1, Ángela Navarrete1 and José Tavera1 1 Instituto de Ciencias del Mar y Limnología, Universidad del Valle, Cali, Colombia 2 Bahía Málaga, Consejo Comunitario Comunidad Negra de La Plata Bahía Málaga, Buenaventura, Colombia 3 Department of Biomaterials, Universität Bayreuth, Bayreuth, Germany ABSTRACT Background. The anthropogenic modification of trophic pathways is seemingly prompting the increase of jellyfish populations at the expense of planktivorous fishes. However, gross generalizations are often made because the most basic aspects of trophic ecology and the diverse interactions of jellyfish with fishes remain poorly described. Here we inquire on the dynamics of food consumption of the medusoid stage of the scyphozoan jellyfish Stomolophus meleagris and characterize the traits and diversity of its symbiotic community. Methods. S. meleagris and their associated fauna were sampled in surface waters between November 2015 and April 2017 in Málaga Bay, an estuarine system at the Colombian Pacific. Stomach contents of medusae were examined and changes in prey composition and abundance over time analysed using a multivariate approach. The associated fauna was identified and the relationship between the size of medusae and the size those organisms tested using least-square fitting procedures. Results. The presence of S. meleagris medusa in surface waters was seasonal. The gut contents analysis revealed that algae, copepods and fish early life stages were the more abundant items, and PERMANOVA analysis showed that the diet differed within the seasons (P(perm) D 0:001) but not between seasons (P(perm) D 0:134). -
RACE Species Codes and Survey Codes 2018
Alaska Fisheries Science Center Resource Assessment and Conservation Engineering MAY 2019 GROUNDFISH SURVEY & SPECIES CODES U.S. Department of Commerce | National Oceanic and Atmospheric Administration | National Marine Fisheries Service SPECIES CODES Resource Assessment and Conservation Engineering Division LIST SPECIES CODE PAGE The Species Code listings given in this manual are the most complete and correct 1 NUMERICAL LISTING 1 copies of the RACE Division’s central Species Code database, as of: May 2019. This OF ALL SPECIES manual replaces all previous Species Code book versions. 2 ALPHABETICAL LISTING 35 OF FISHES The source of these listings is a single Species Code table maintained at the AFSC, Seattle. This source table, started during the 1950’s, now includes approximately 2651 3 ALPHABETICAL LISTING 47 OF INVERTEBRATES marine taxa from Pacific Northwest and Alaskan waters. SPECIES CODE LIMITS OF 4 70 in RACE division surveys. It is not a comprehensive list of all taxa potentially available MAJOR TAXONOMIC The Species Code book is a listing of codes used for fishes and invertebrates identified GROUPS to the surveys nor a hierarchical taxonomic key. It is a linear listing of codes applied GROUNDFISH SURVEY 76 levelsto individual listed under catch otherrecords. codes. Specifically, An individual a code specimen assigned is to only a genus represented or higher once refers by CODES (Appendix) anyto animals one code. identified only to that level. It does not include animals identified to lower The Code listing is periodically reviewed -
Phylogeny of Stromateiformes (Teleostei; Percomorphacea) Based on Phenotypic Data
Murilo Nogueira de Lima Pastana Phylogeny of Stromateiformes (Teleostei; Percomorphacea) based on phenotypic data Relações filogenéticas de Stromateiformes (Teleostei; Percomorphacea) com base em dados fenotípicos São Paulo 2019 Murilo Nogueira de Lima Pastana Phylogeny of Stromateiformes (Teleostei; Percomorphacea) based on phenotypic data Relações filogenéticas de Stromateiformes (Teleostei; Percomorphacea) com base em dados fenotípicos Versão Original Tese apresentada ao Programa de Pós- Graduação do Museu de Zoologia da Universidade de São Paulo para obtenção do título de Doutor em Ciências (Sistemática, Taxonomia Animal e Biodiversidade). Orientador: Prof. Dr. Aléssio Datovo São Paulo 2019 Não autorizo a reprodução e divulgação total ou parcial deste trabalho, por qualquer meio convencional ou eletrônico, para fins de estudo e pesquisa, desde que citada a fonte. Serviço de Biblioteca e Documentação Museu de Zoologia da Universidade de São Paulo Catalogação na Publicação Pastana, Murilo Nogueira de Lima Phylogeny of Stromateiformes (Teleostei; Percomorphacea) based on phenotypic data = Relações filogenéticas de Stromateiformes (Teleostei; Percomorphacea) com base em dados fenotípicos/ Murilo Nogueira de Lima Pastana; orientador Aléssio Datovo. São Paulo 2019. 309p. Tese apresentada ao Programa de Pós-Graduação em Sistemática, Taxonomia e Biodiversidade, Museu de Zoologia, Universidade de São Paulo, 2019. Versão original 1. Teleostei- filogenia. 2. Morfologia – Stromateiformes. I. Datovo, Alessio, orient. II. Título. CDU 597.5 PASTANA, Murilo Nogueira de Lima Phylogeny of Stromateiformes (Teleostei; Percomorphacea) based on phenotypic data Relações filogenéticas de Stromateiformes (Teleostei; Percomorphacea) com base em dados fenotípicos Tese apresentada ao Programa de Pós-Graduação do Museu de Zoologia da Universidade de São Paulo para obtenção do título de Doutor em Ciências (Sistemática, Taxonomia Animal e Biodiversidade).