Changes in Philornis Infestation Behavior Threaten Darwin's Finch Survival
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Cross-Temporal Analysis of Genetic Diversity in the Endangered Medium Tree Finch (Camarhynchus Pauper) and Closely Related Darwin’S Finches
Cross-Temporal Analysis of Genetic Diversity in the Endangered Medium Tree Finch (Camarhynchus pauper) and Closely Related Darwin’s Finches By Colleen Metzger B.S., Juniata College, 2009 A thesis submitted to the Graduate School of the University of Cincinnati Department of Biological Sciences In partial fulfillment of the requirements For the degree of Master of Science Committee Chair: Kenneth Petren, Ph.D. November 2012 Abstract Natural history collections can provide a direct view of past genotypes, which allows greater insight into evolutionary processes that are relevant for conservation and management. However, few studies have used broad surveys of multilocus genotypes from the past to address the wide range of processes that can affect conservation planning of a species today. Therefore, we assessed the history and status of the critically endangered medium tree finch, Camarhynchus pauper, an endemic finch of the Galápagos Islands. Using ancient DNA techniques, we quantified cross-temporal genetic change for 16 microsatellite loci in this species and its relatives. We tested the hypothesis that C. pauper has undergone a recent reduction in population size and loss of genetic diversity, and evaluated the hypothesis that C. pauper is genetically distinct from its two closest relatives, C. parvulus and C. psittacula. We assessed whether decline in C. pauper has led to increased hybridization with other species and evaluated a long-standing hypothesis of its origin from C. psittacula on another island using genetic distances, assignment tests, and migration analyses. Genetic diversity declined significantly in C. pauper over time, and several other tree finch populations showed similar losses of genetic diversity. -
Ecuador & the Galapagos Islands
Ecuador & the Galapagos Islands - including Sacha Lodge Extension Naturetrek Tour Report 29 January – 20 February 2018 Medium Ground-finch Blue-footed Booby Wire-tailed Manakin Galapagos Penguin Green Sea Turtle Report kindly compiled by Tour participants Sally Wearing, Rowena Tye, Debbie Hardie and Sue Swift Images courtesy of David Griffiths, Sue Swift, Debbie Hardie, Jenny Tynan, Rowena Tye, Nick Blake and Sally Wearing Naturetrek Mingledown Barn Wolf’s Lane Chawton Alton Hampshire GU34 3HJ UK T: +44 (0)1962 733051 E: [email protected] W: www.naturetrek.co.uk Tour Report Ecuador & the Galapagos Islands - including Sacha Lodge Extension Tour Leader in the Galapagos: Juan Tapia with 13 Naturetrek Clients This report has kindly been compiled by tour participants Sally Wearing, Rowena Tye, Debbie Hardie and Sue Swift. Day 1 Monday 29th January UK to Quito People arrived in Quito via Amsterdam with KLM or via Madrid with Iberia, while Tony came separately from the USA. Everyone was met at the airport and taken to the Hotel Vieja Cuba; those who were awake enough went out to eat before a good night’s rest. Day 2 Tuesday 30th January Quito. Weather: Hot and mostly sunny. The early risers saw the first few birds of the trip outside the hotel: Rufous- collared Sparrow, Great Thrush and Eared Doves. After breakfast, an excellent guide took us on a bus and walking tour of Quito’s old town. This started with the Basilica del Voto Nacional, where everyone marvelled at the “grotesques” of native Ecuadorian animals such as frigatebirds, iguanas and tortoises. -
FIELD GUIDES BIRDING TOURS: Galapagos: an Intimate Look At
Field Guides Tour Report Galapagos: An Intimate Look at Darwin's Islands II 2014 Jul 5, 2014 to Jul 15, 2014 Megan Edwards Crewe with Peter Freire For our tour description, itinerary, past triplists, dates, fees, and more, please VISIT OUR TOUR PAGE. For those interested in natural history, the Galapagos Islands are a wonderland. Every island is a revelation. The animals -- though wild and unfettered -- are so trusting as to seem tame. Our week's cruise brought us within arm's length of Galapagos Tortoises the size of coffee tables and whip-fast lava lizards. Albatrosses snoozed in the middle of paths. Mockingbirds investigated bare toes. Boobies stomped their way through our group. "Darwin's Finches" circled as if planning to land atop heads or arms or camera lenses. And everywhere, we could settle in for extended studies of plants or birds or insects or herps or fish, secure in the knowledge that they just wouldn't care that we were there. As you might expect in such a naturalist's paradise, there were many, many highlights. Waved Albatrosses called and bowed and clattered their beaks together, or brooded small chicks (which look surprisingly poodle- The Swallow-tailed Gull is surely one of the world's most handsome seabirds. (Photo by guide Megan like, thanks to their curly feathers). Blue-footed Edwards Crewe) Boobies whistled and grunted and solemnly displayed their extraordinary feet to each other. Well-camouflaged Short-eared Owls lurked among a whirling mass of Wedge-rumped Storm-Petrels, waiting for an opportunity -- and a one-eyed hunter gobbled its hapless prey nearly at our feet. -
Can Darwin's Finches and Their Native Ectoparasites Survive the Control of Th
Insect Conservation and Diversity (2017) 10, 193–199 doi: 10.1111/icad.12219 FORUM & POLICY Coextinction dilemma in the Galapagos Islands: Can Darwin’s finches and their native ectoparasites survive the control of the introduced fly Philornis downsi? 1 2 MARIANA BULGARELLA and RICARDO L. PALMA 1School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand and 2Museum of New Zealand Te Papa Tongarewa, Wellington, New Zealand Abstract. 1. The survival of parasites is threatened directly by environmental alter- ation and indirectly by all the threats acting upon their hosts, facing coextinction. 2. The fate of Darwin’s finches and their native ectoparasites in the Galapagos Islands is uncertain because of an introduced avian parasitic fly, Philornis downsi, which could potentially drive them to extinction. 3. We documented all known native ectoparasites of Darwin’s finches. Thir- teen species have been found: nine feather mites, three feather lice and one nest mite. No ticks or fleas have been recorded from them yet. 4. Management options being considered to control P. downsi include the use of the insecticide permethrin in bird nests which would not only kill the invasive fly larvae but the birds’ native ectoparasites too. 5. Parasites should be targeted for conservation in a manner equal to that of their hosts. We recommend steps to consider if permethrin-treated cotton sta- tions are to be deployed in the Galapagos archipelago to manage P. downsi. Key words. Chewing lice, coextinction, Darwin’s finches, dilemma, ectoparasites, feather mites, Galapagos Islands, permethrin, Philornis downsi. Introduction species have closely associated species which are also endangered (Dunn et al., 2009). -
Inbreeding in Darwin's Medium Ground Finches (Geospiza Fortis)
Evohaion, 43(6),1989, pp. 1273-1284 INBREEDING IN DARWIN'S MEDIUM GROUND FINCHES (GEOSPIZA FORTIS) H, LISLE GIBBS'" Museum ofZoology and Department ofBiology, The University ofMichigan, Ann Arbor, MI48109-1079 AND PETER R. GRANT Department ofBiology, Princeton University, Princeton, NJ 08544-1008 Abstract. - We studied the frequency and causes of inbreeding and its effect on reproductive success in a population of Darwin's Medium Ground Finches iGeospiza fortis) on Isla Daphne Major, Galapagos, during four breeding seasons (1981, 1983, 1984, and 1987). Pedigree analysis showed that levels of inbreeding were low but comparable with those observed in other passerine birds. For pairs with at least half of their grandparents known, approximately 20% of all pairings were between detectably related birds. The frequency ofpairings between closely related birds (coefficient of kinship [</>] ~ 0.250) among all pairs was 0.6%. We detected no effect of inbreeding on repro ductive success, although sample sizes were small. The observed reproductive output of related pairs was not significantly different from the output ofunrelated pairs, and there was no correlation between a pair's kinship coefficient and an estimate of the potential magnitude of inbreeding depression. Comparisons with a study ofGreat Tits (Parus major) by van Noordwijk and Scharloo (1981) suggest that, even if present, the fitness costs of inbreeding in this population of G. fortis would be low. Observed levels of inbreeding in each breeding episode were accurately predicted by simulations of random mating in which relatedness had no influence on pairing between in dividuals. This result suggests that levels ofinbreeding in this population are determined more by demographic factors than by behavioral avoidance of mating with kin. -
WILDLIFE CHECKLIST Reptiles the Twenty-Two Species of Galapagos
WILDLIFE CHECKLIST Reptiles The twenty-two species of Galapagos reptiles belong to five families, tortoises, marine turtles, lizards/iguanas, geckos and Clasifications snakes. Twenty of these species are endemic to the * = Endemic archipelago and many are endemic to individual islands. The Islands are well-known for their giant tortoises ever since their R = Resident discovery and play an important role in the development of Charles Darwin's theory of evolution. The name "Galapagos" M = Migrant originates from the spanish word "galapago" that means saddle. * Santa Fe land Iguana Conolophus pallidus Iguana Terrestre de Santa Fe * Giant Tortoise (11 Geochelone elephantopus Tortuga Gigante subspecies) M Pacific Green Sea Chelonia mydas Tortuga Marina Turtle * Marine Iguana * (7 Amblyrhynchus cristatus Iguana Marina subspecies) * Galapagos land Conolophus subcristatus Iguana Terrestre Iguana * Lava lizard (7 species) Tropidurus spp Lagartija de Lava Phyllodactylus * Gecko (6 species) Gecko galapagoensis * Galapagos snake (3 Culebras de Colubridae alsophis species) Galapagos Sea Birds The Galapagos archipelago is surrounded by thousands of miles of open ocean which provide seabirds with a prominent place in the fauna of the Islands . There are 19 resident species (5 are endemic), most of which are seen by visitors. There may be as many as 750,000 seabirds in Galapagos, including 30% of the world's blue-footed boobies, the world's largest red- footed booby colony and perhaps the largest concentration of masked boobies in the world (Harris, -
Galapagos Endemics Cruise: October-November 2013
Tropical Birding Trip Report Galapagos Endemics Cruise: October-November 2013 A Tropical Birding SET DEPARTURE tour Galapagos Endemics Cruise 24 October – 2 November 2013 A visit to the largest Waved Albatross colony in the world was an undoubted highlight Tropical Birding Tour leader: Jose Illanes (With Galapagos Naturalist Guide Jairo) 1 www.tropicalbirding.com +1-409-515-0514 [email protected] Page Tropical Birding Trip Report Galapagos Endemics Cruise: October-November 2013 Itinerary: Day 1 Arrival in Quito/night Quito Day 2 Quito to Baltra and Santa Cruz Day 3 Genovesa Day 4 Isabela to Bartolome Day 5 Bartolome to San Cristobal Day 6 San Cristobal to Española Day 7 Española Day 8 Floreana and Santa Cruz Day 9 North Seymour to Quito Day 10 Departure from Quito October 25: Quito to Baltra and Santa Cruz As for anybody going to the Galapagos Islands, it is perceived, correctly, as unique and amazing, and, as we were sitting on the plane, everybody’s minds were focused on getting there, and wishing they were there already! I had not been to the Galapagos for a while, and so I had my own excitement of returning to the islands myself knowing this would be a marked change from my usual tours within the jungles and rainforests of the mainland. This was to be a tour where the views of the birds were my least concern, as everything shows well. As we arrived at the main entry port to the Galapagos, the tiny island of Baltra, 2 www.tropicalbirding.com +1-409-515-0514 [email protected] Page Tropical Birding Trip Report Galapagos Endemics Cruise: October-November 2013 everyone’s eyes were glued to the window, taking in their first sights of the islands, which, for some, included their first Galapagos Doves flying by. -
The Size of Beaks of Darwin's Finches on the Galápagos Islands Is Influenced by Natural Selection
NOT FOR SALE TheT size of beaks of Darwin’s fi nches on the Galápagos 8 IIslands is infl uenced by natural selection. © Roberts and Company Publishers, ISBN: 9781936221172, due August 15, 2012, For examination purposes only FINAL PAGES ZE_Ch08_p218-253.indd 218 7/18/12 2:06 PM NOT FOR SALE Natural Selection Empirical Studies in the Wild Learning Objectives • Describe the diff erences between directional selection and stabilizing selection. • Demonstrate how predators can act as agents of selection. • Explain how scarlet kingsnakes can exhibit a colorful pattern in one part of their range and be much redder in another. • Defi ne extended phenotypes. • Explain how replicated natural experiments can be used to examine evolutionary change in response to selection. • Analyze how selective sweeps can be detected within genomes. • Describe three genetic changes that have been identifi ed in the evolution of maize. • Explain how Bt resistance came about in insects. • Explain how body size and gape width could have evolved in Australian snakes in response to the invasion of cane toads. • Discuss how fi shing regulations could aff ect growth rates of fi sh populations. Charles Darwin managed to visit only a handful of the Galápa- gos Islands in 1835 while on his journey aboard the Beagle. Among the many islands he passed by was a tiny volcanic cone known as Daphne Major. Even today, it is not an easy place to visit. To set foot on Daphne Major, you have to approach a steep cliff in a small boat and then take an acrobatic leap onto a tiny ledge. -
The Origin of Species: the Beak of the Finch [NARRATOR:] Our Planet
The Origin of Species: The Beak of the Finch [NARRATOR:] Our planet has millions of species. Over 300,000 beetles alone. 17,000 butterflies. Thousands of mammals, fish and birds, all astonishingly different. How did so many species come to be? To seek insights into that question, researchers are focusing on places where species recently arose, such as the remote Galápagos Islands. [CARROLL:] Scientists are making observations and conducting experiments that would have surprised Charles Darwin. And they're discovering new insights into what the great naturalist called the "mystery of mysteries": How new species form. [NARRATOR:] The Galápagos Islands are one of the most spectacular landscapes in the world, home to a variety of species that live nowhere else. Biologists Peter and Rosemary Grant have been seeking answers to how species arise by focusing on one of the smaller islands, called Daphne Major. [PETER GRANT:] When we started out, we had no plan for the long term. In fact, we thought it was just going to be just a few years, maybe two years. [NARRATOR:] Two years have turned into a 40-year odyssey. The Grants have returned every summer since 1973. [ROSEMARY GRANT:] Oh, there's a bird. [PETER GRANT:] Is that 306? [ROSEMARY GRANT:] Three oh metal six. [NARRATOR:] Here, they've made some of the most remarkable observations in the history of field research as they studied the famed Galápagos finches. The finches were first brought to scientists' attention by Charles Darwin, when his voyage around South America brought him to this cluster of islands 600 miles from mainland Ecuador. -
Order Evolutionary Adaptation Response to the Environment
Order Response to the environment Evolutionary adaptation Reproduction Regulation Energy processing Growth and development 1 The biosphere Tissues Ecosystems Organs and organ systems Communities Cells Organelles Organisms Atoms Populations Molecules 2 Sunlight Leaves absorb light energy from Leaves take in the sun. carbon dioxide CO2 from the air and release oxygen. O2 Cycling of chemical nutrients Leaves fall to Water and Animals eat the ground and minerals in leaves and fruit are decomposed the soil are from the tree. by organisms taken up by that return the tree minerals to the through soil. its roots. 3 Sunlight Heat When energy is used Producers absorb light to do work, some energy and transform it into energy is converted to chemical energy. thermal energy, which is lost as heat. An animal’s muscle cells convert Chemical chemical energy energy from food to kinetic energy, the energy of motion. A plant’s cells use chemical energy to do Chemical energy in work such as growing food is transferred new leaves. from plants to consumers. (a) Energy flow from sunlight to (b) Using energy to do work producers to consumers 4 (a) Wings (b) Wing bones 5 Prokaryotic cell Eukaryotic cell DNA (no nucleus) Membrane Membrane Cytoplasm Nucleus (membrane- enclosed) Membrane- DNA (throughout enclosed organelles nucleus) 1 µm 6 Sperm cell Nuclei containing DNA Fertilized egg with DNA from Embryo’s cells with Egg cell both parents copies of inherited DNA Offspring with traits inherited from both parents 7 Nucleus A DNA C Nucleotide T A T Cell A C C G T A G T A (a) DNA double helix (b) Single strand of DNA 8 A Negative feedback Enzyme 1 B D Enzyme 2 Excess D blocks a step. -
Genetic Adaptation and Speciation in Darwin S Finches and Atlantic Herring
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Lamichhaney Et Al. 2015. Evolution of Darwin's Finches and Their Beaks
ARTICLE doi:10.1038/nature14181 Evolution of Darwin’s finches and their beaks revealed by genome sequencing Sangeet Lamichhaney1*, Jonas Berglund1*, Markus Sa¨llman Alme´n1, Khurram Maqbool2, Manfred Grabherr1, Alvaro Martinez-Barrio1, Marta Promerova´1, Carl-Johan Rubin1, Chao Wang1, Neda Zamani1,3, B. Rosemary Grant4, Peter R. Grant4, Matthew T. Webster1 & Leif Andersson1,2,5 Darwin’s finches, inhabiting the Gala´pagos archipelago and Cocos Island, constitute an iconic model for studies of speci- ation and adaptive evolution. Here we report the results of whole-genome re-sequencing of 120 individuals representing all of the Darwin’s finch species and two close relatives. Phylogenetic analysis reveals important discrepancies with the phenotype-based taxonomy. We find extensive evidence for interspecific gene flow throughout the radiation. Hybrid- ization has given rise to species of mixed ancestry. A 240 kilobase haplotype encompassing the ALX1 gene that encodes a transcription factor affecting craniofacial development is strongly associated with beak shape diversity across Darwin’s finch species as well as within the medium ground finch (Geospiza fortis), a species that has undergone rapid evolution of beak shape in response to environmental changes. The ALX1 haplotype has contributed to diversification of beak shapes among the Darwin’s finches and, thereby, to an expanded utilization of food resources. Adaptive radiations are particularly informative for understanding the diversification throughout phylogeny, and report the discovery of a locus ecological and genetic basis of biodiversity1,2. Those causes are best iden- with a major effect on beak shape. tified in young radiations, as they represent the early stages of diver- sification when phenotypic transitions between species are small and Considerable nucleotide diversity interpretable and extinctions are likely to be minimal3.