Mushroom Poisoning Outbreaks — China, 2020
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Diversity of MSDIN Family Members in Amanitin-Producing Mushrooms
He et al. BMC Genomics (2020) 21:440 https://doi.org/10.1186/s12864-020-06857-8 RESEARCH ARTICLE Open Access Diversity of MSDIN family members in amanitin-producing mushrooms and the phylogeny of the MSDIN and prolyl oligopeptidase genes Zhengmi He, Pan Long, Fang Fang, Sainan Li, Ping Zhang and Zuohong Chen* Abstract Background: Amanitin-producing mushrooms, mainly distributed in the genera Amanita, Galerina and Lepiota, possess MSDIN gene family for the biosynthesis of many cyclopeptides catalysed by prolyl oligopeptidase (POP). Recently, transcriptome sequencing has proven to be an efficient way to mine MSDIN and POP genes in these lethal mushrooms. Thus far, only A. palloides and A. bisporigera from North America and A. exitialis and A. rimosa from Asia have been studied based on transcriptome analysis. However, the MSDIN and POP genes of many amanitin-producing mushrooms in China remain unstudied; hence, the transcriptomes of these speices deserve to be analysed. Results: In this study, the MSDIN and POP genes from ten Amanita species, two Galerina species and Lepiota venenata were studied and the phylogenetic relationships of their MSDIN and POP genes were analysed. Through transcriptome sequencing and PCR cloning, 19 POP genes and 151 MSDIN genes predicted to encode 98 non- duplicated cyclopeptides, including α-amanitin, β-amanitin, phallacidin, phalloidin and 94 unknown peptides, were found in these species. Phylogenetic analysis showed that (1) MSDIN genes generally clustered depending on the taxonomy of the genus, while Amanita MSDIN genes clustered depending on the chemical substance; and (2) the POPA genes of Amanita, Galerina and Lepiota clustered and were separated into three different groups, but the POPB genes of the three distinct genera were clustered in a highly supported monophyletic group. -
Phd. Thesis Sana Jabeen.Pdf
ECTOMYCORRHIZAL FUNGAL COMMUNITIES ASSOCIATED WITH HIMALAYAN CEDAR FROM PAKISTAN A dissertation submitted to the University of the Punjab in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in BOTANY by SANA JABEEN DEPARTMENT OF BOTANY UNIVERSITY OF THE PUNJAB LAHORE, PAKISTAN JUNE 2016 TABLE OF CONTENTS CONTENTS PAGE NO. Summary i Dedication iii Acknowledgements iv CHAPTER 1 Introduction 1 CHAPTER 2 Literature review 5 Aims and objectives 11 CHAPTER 3 Materials and methods 12 3.1. Sampling site description 12 3.2. Sampling strategy 14 3.3. Sampling of sporocarps 14 3.4. Sampling and preservation of fruit bodies 14 3.5. Morphological studies of fruit bodies 14 3.6. Sampling of morphotypes 15 3.7. Soil sampling and analysis 15 3.8. Cleaning, morphotyping and storage of ectomycorrhizae 15 3.9. Morphological studies of ectomycorrhizae 16 3.10. Molecular studies 16 3.10.1. DNA extraction 16 3.10.2. Polymerase chain reaction (PCR) 17 3.10.3. Sequence assembly and data mining 18 3.10.4. Multiple alignments and phylogenetic analysis 18 3.11. Climatic data collection 19 3.12. Statistical analysis 19 CHAPTER 4 Results 22 4.1. Characterization of above ground ectomycorrhizal fungi 22 4.2. Identification of ectomycorrhizal host 184 4.3. Characterization of non ectomycorrhizal fruit bodies 186 4.4. Characterization of saprobic fungi found from fruit bodies 188 4.5. Characterization of below ground ectomycorrhizal fungi 189 4.6. Characterization of below ground non ectomycorrhizal fungi 193 4.7. Identification of host taxa from ectomycorrhizal morphotypes 195 4.8. -
Mycosphere Essays 15. Ganoderma Lucidum - Are the Beneficial Medical Properties Substantiated?
Mycosphere 7 (6): 687–715 (2016) ISSN 2077 7019 www.mycosphere.org Article Mycosphere Copyright © 2016 Online Edition Doi 10.5943/mycosphere/7/6/1 Mycosphere Essays 15. Ganoderma lucidum - are the beneficial medical properties substantiated? Hapuarachchi KK1,2,3, Wen TC1, Jeewon R4, Wu XL5 and Kang JC1 1The Engineering Research Center of Southwest Bio–Pharmaceutical Resource Ministry of Education, Guizhou University, Guiyang 550025, Guizhou Province, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand 4Department of Health Sciences, Faculty of Science, University of Mauritius, Mauritius, 80837 5Guizhou Academy of Sciences, Guiyang, 550009, Guizhou Province, China Hapuarachchi KK, Wen TC, Jeewon R, Wu XL, Kang JC. 2016 – Mycosphere Essays 15. Ganoderma lucidum - are the beneficial medical properties substantiated?. Mycosphere 7(6), 687– 715, Doi 10.5943/mycosphere/7/6/1 Abstract Ganoderma lucidum, commonly treated as Lingzhi mushroom, is a traditional Chinese medicine which has been widely used over two millennia in Asian countries for maintaining vivacity and longevity. Numerous publications can be found reporting that G. lucidum may possess various beneficial medical properties and contributes to a variety of biological actions by primary metabolites, such as polysaccharides, proteins and triterpenes. Although G. lucidum still remains as a popular agent in commercial products, there is a lack of scientific study on the safety and effectiveness of G. lucidum in humans. There have been some reports of human trials using G. lucidum as a direct control agent for various diseases including arthritis, asthma, diabetes, gastritis, hepatitis, hypertension and neurasthenia, but scientific evidence is still inconclusive. -
Análise Em Larga Escala Das Regiões Intergênicas ITS, ITS1 E ITS2 Para O Filo Basidiomycota (Fungi)
UNIVERSIDADE FEDERAL DE MINAS GERAIS INSTITUTO DE CIÊNCIAS BIOLÓGICAS PROGRAMA INTERUNIDADES DE PÓS-GRADUAÇÃO EM BIOINFORMÁTICA DISSERTAÇÃO DE MESTRADO FRANCISLON SILVA DE OLIVEIRA Análise em larga escala das regiões intergênicas ITS, ITS1 e ITS2 para o filo Basidiomycota (Fungi) Belo Horizonte 2015 Francislon Silva de Oliveira Análise em larga escala das regiões intergênicas ITS, ITS1 e ITS2 para o filo Basidiomycota (Fungi) Dissertação apresentada ao Programa Interunidades de Pós-Graduação em Bioinformática da UFMG como requisito parcial para a obtenção do grau de Mestre em Bioinformática. ORIENTADOR: Prof. Dr. Guilherme Oliveira Correa CO-ORIENTADOR: Prof. Dr. Aristóteles Góes-Neto Belo Horizonte 2015 AGRADECIMENTOS À minha família e amigos pelo amor e confiança depositadas em mim. Aos meus orientadores Guilherme e Aristóteles por todo o suporte oferecido durante todo o mestrado. À Fernanda Badotti pelas discussões biológicas sobre o tema de DNA barcoding e por estar sempre disposta a ajudar. À toda equipe do Centro de Excelência em Bioinformática pelos maravilhosos momentos que passamos juntos. Muito obrigado por toda paciência nesse momento final de turbulência do mestrado. Aos membros do Center for Tropical and Emerging Global Diseases pela sensacional receptividade durante o meu estágio de quatro meses na University of Georgia. Um agradecimento especial à Dra. Jessica Kissinger pelos conselhos científicos e à Betsy pela atenção e disponibilidade de ajudar a qualquer momento. Aos colegas do programa de pós-graduação em bioinformática da UFMG pelos momentos de descontração e discussão científica na mesa do bar !. Aos membros da secretaria do programa de pós-graduação pela simpatia e vontade de ajudar sempre. -
Mushrooms of Southwestern BC Latin Name Comment Habitat Edibility
Mushrooms of Southwestern BC Latin name Comment Habitat Edibility L S 13 12 11 10 9 8 6 5 4 3 90 Abortiporus biennis Blushing rosette On ground from buried hardwood Unknown O06 O V Agaricus albolutescens Amber-staining Agaricus On ground in woods Choice, disagrees with some D06 N N Agaricus arvensis Horse mushroom In grassy places Choice, disagrees with some D06 N F FV V FV V V N Agaricus augustus The prince Under trees in disturbed soil Choice, disagrees with some D06 N V FV FV FV FV V V V FV N Agaricus bernardii Salt-loving Agaricus In sandy soil often near beaches Choice D06 N Agaricus bisporus Button mushroom, was A. brunnescens Cultivated, and as escapee Edible D06 N F N Agaricus bitorquis Sidewalk mushroom In hard packed, disturbed soil Edible D06 N F N Agaricus brunnescens (old name) now A. bisporus D06 F N Agaricus campestris Meadow mushroom In meadows, pastures Choice D06 N V FV F V F FV N Agaricus comtulus Small slender agaricus In grassy places Not recommended D06 N V FV N Agaricus diminutivus group Diminutive agariicus, many similar species On humus in woods Similar to poisonous species D06 O V V Agaricus dulcidulus Diminutive agaric, in diminitivus group On humus in woods Similar to poisonous species D06 O V V Agaricus hondensis Felt-ringed agaricus In needle duff and among twigs Poisonous to many D06 N V V F N Agaricus integer In grassy places often with moss Edible D06 N V Agaricus meleagris (old name) now A moelleri or A. -
Diversity of MSDIN Family Members in Amanitin- Producing Mushrooms and the Phylogeny of the MSDIN and Prolyl Oligopeptidase Gene
Diversity of MSDIN family members in amanitin-producing mushrooms and the phylogeny of the MSDIN and prolyl oligopeptidase genes Zhengmi He Hunan Normal University Pan Long Hunan Normal University Fang Fang Hunan Normal University Sainan Li Hunan Normal University Ping Zhang Hunan Normal University Zuohong Chen ( [email protected] ) Hunan Normal University Research article Keywords: Amanita, Galerina, Lepiota, cyclopeptide toxin, prolyl oligopeptidase, horizontal gene transfer Posted Date: January 29th, 2020 DOI: https://doi.org/10.21203/rs.2.22199/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Version of Record: A version of this preprint was published on June 26th, 2020. See the published version at https://doi.org/10.1186/s12864-020-06857-8. Page 1/26 Abstract Background Amanitin-producing mushrooms, mainly distributed in the genera Amanita , Galerina and Lepiota , possess MSDIN gene family for the biosynthesis of many cyclopeptides catalyzed by prolyl oligopeptidase (POP). Recently, transcriptome sequencing has proven to be a ecient way to mine MSDIN and POP genes in these lethal mushrooms. Until now, only A . palloides and A. bisporigera from North America and A . exitialis from Asia have been studied based on transcriptome analysis. However, MSDIN and POP genes of many amanitin-producing mushrooms in China remain unstudied, and hence the transcriptomes of these speices deserve to be analysed. Results In this study, the MSDIN and POP genes from ten Amanita species, two Galerina species and Lepiota venenata were studied and the phylogenetic relationships of their MSDIN and POP genes were analyzed. Through transcriptome sequencing and PCR cloning, 19 POP genes and 151 MSDIN genes predicted to encode 98 non-duplicated cyclopeptides, including α-amanitin, β-amanitin, phallacidin, phalloidin and 94 unknown peptides, were found in these species. -
New Species of Amanita Subgen. Lepidella from Guyana
VOLUME 3 JUNE 2019 Fungal Systematics and Evolution PAGES 1–12 doi.org/10.3114/fuse.2019.03.01 New species of Amanita subgen. Lepidella from Guyana K.S. Mighell1, T.W. Henkel1*, R.A. Koch2, A. Goss1, M.C. Aime2 1Department of Biological Sciences, Humboldt State University, Arcata, CA 95521, USA 2Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 47907, USA *Corresponding author: [email protected] Key words: Abstract: New species of Amanita subgen. Lepidella are described from Guyana. Amanita cyanochlorinosma sp. ectomycorrhizal fungi nov., Amanita fulvoalba sp. nov., and Amanita guyanensis sp. nov. represent the latest additions to the growing Guiana Shield body of newly described ectomycorrhizal fungi native to Dicymbe-dominated tropical rainforests. Macro- and monodominant forests micromorphological characters, habitat, and DNA sequence data for the ITS, nrLSU, rpb2, and ef1-α are provided Neotropics for each taxon, and b-tubulin for most. Distinctive morphological features warrant the recognition of the three new new taxa species and a molecular phylogenetic analysis of taxa acrossAmanita subgen. Lepidella corroborates their infrageneric systematics placements. taxonomy Effectively published online: 28 November 2018. INTRODUCTION from the tropics (Thongbai et al. 2016). Tropical Amanita species frequently occur in spatially restricted mono- or co-dominant Amanita (Amanitaceae, Agaricomycetes, Basidiomycota) is a stands of ECM host trees, and thus appear to have smaller Editor-in-Chief monophyleticProf. dr P.W. Crous, Westerdijk mushroom Fungal Biodiversity genus Institute, with P.O. cosmopolitan Box 85167, 3508 AD Utrecht, distribution The Netherlands. geographic ranges. They can, however, be a major component E-mail: [email protected] (Drehmel et al. -
Identification of Cyclopropylacetyl-(R)-Carnitine, a Unique Chemical Marker of the Fatally Toxic Mushroom Russula Subnigricans
602 Chem. Pharm. Bull. 64, 602–608 (2016) Vol. 64, No. 6 Regular Article Identification of Cyclopropylacetyl-(R)-carnitine, a Unique Chemical Marker of the Fatally Toxic Mushroom Russula subnigricans Masanori Matsuura, Suguru Kato, Yoko Saikawa, Masaya Nakata, and Kimiko Hashimoto* Department of Applied Chemistry, Faculty of Science and Technology, Keio University; 3–14–1 Hiyoshi, Kohoku-ku, Yokohama 223–8522, Japan. Received December 20, 2015; accepted March 17, 2016 A toxic mushroom, Russula subnigricans, causes fatal poisoning by mistaken ingestion. In spite of the potent bioactivity, the responsible toxin had not been identified for about 50 years since its first documenta- tion. Recently, we isolated an unstable toxin and determined the structure. The slow elucidation was partly due to the instability of the toxin and also due to misidentification of R. subnigricans for similar mushrooms. To discriminate genuine Russula subnigricans from similar unidentified Russula species, we searched for a unique chemical marker contained in the mushroom. Cyclopropylacetyl-(R)-carnitine specific to R. subnigri- cans was identified as a novel compound whose 1H-NMR signals appearing in the upfield region were easily recognizable among the complicated signals of the crude extract. Key words cyclopropylacetyl-(R)-carnitine; cycloprop-2-ene carboxylic acid; russuphelin G; mushroom poisoning; Russula subnigricans; Russulaceae Mushroom poisonings attributable to the Russulaceae cause of accidental poisonings. The three representative Rus- mushroom Russula subnigricans were first documented in sula species identified to date in Japan are R. subnigricans, R. 1954 in Japan.1) In the past 50 years, the following seven nigricans, and R. densifolia; the latter two are considered to poisonings have occurred: [deaths/cases (year, place where be edible after cooking. -
R Mcilvainea 0 Journal of American Amateur Mycology
A COMPARISON OF TAXONOMIC KEYS TO SPECIES WITHIN THE GENUS RUSSULA Jane E. Smith U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station, r_Mcilvainea 3200 Jefferson Way, Corvallis, OR 97331, USA and Journal of American Amateur Mycology Teresa Lebel 0 National Herbarium of Victoria, Royal Botanic Gardens Melbourne, Birdwood Avenue, South Yarra 3141, Victoria, Australia Published by the North American Mycological Association Vol. 15 No. 1 2001 Abstract More than 700 dried collections of Russula from a large scale four-year study conducted in the western Cascade Range of Oregon were examined and identified with the aid of several recently published species descriptions and keys to species within the genus Russula. Few regional taxonomic references to this genus were available at the time of the study. The strengths and lim- itations of the keys to this and other situations are described. A comparison of each keys species or species groupings for the species we encountered is pro- vided. Suggestions for identifying Russula species in large scale ecological studies are discussed. Introduction The recent advent of large scale ecological studies designed to provide knowl- edge about fungal communities and species diversity has created a dilemma for mycologists with respect to accurately and efficiently processing large numbers of collections. In ideal situations, mycologists limit collections of fungi in a day to numbers that allow meticulous examination and recording of detailed fresh notes. Specimens are then dried and later positively identi- fied to species using both macro- and microscopic characters. Ecological studies typically require sampling from randoml y selected areas large enough in size to ensure adequate sporocarp production for statistical comparisons. -
Poisoning Associated with the Use of Mushrooms a Review of the Global
Food and Chemical Toxicology 128 (2019) 267–279 Contents lists available at ScienceDirect Food and Chemical Toxicology journal homepage: www.elsevier.com/locate/foodchemtox Review Poisoning associated with the use of mushrooms: A review of the global T pattern and main characteristics ∗ Sergey Govorushkoa,b, , Ramin Rezaeec,d,e,f, Josef Dumanovg, Aristidis Tsatsakish a Pacific Geographical Institute, 7 Radio St., Vladivostok, 690041, Russia b Far Eastern Federal University, 8 Sukhanova St, Vladivostok, 690950, Russia c Clinical Research Unit, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran d Neurogenic Inflammation Research Center, Mashhad University of Medical Sciences, Mashhad, Iran e Aristotle University of Thessaloniki, Department of Chemical Engineering, Environmental Engineering Laboratory, University Campus, Thessaloniki, 54124, Greece f HERACLES Research Center on the Exposome and Health, Center for Interdisciplinary Research and Innovation, Balkan Center, Bldg. B, 10th km Thessaloniki-Thermi Road, 57001, Greece g Mycological Institute USA EU, SubClinical Research Group, Sparta, NJ, 07871, United States h Laboratory of Toxicology, University of Crete, Voutes, Heraklion, Crete, 71003, Greece ARTICLE INFO ABSTRACT Keywords: Worldwide, special attention has been paid to wild mushrooms-induced poisoning. This review article provides a Mushroom consumption report on the global pattern and characteristics of mushroom poisoning and identifies the magnitude of mortality Globe induced by mushroom poisoning. In this work, reasons underlying mushrooms-induced poisoning, and con- Mortality tamination of edible mushrooms by heavy metals and radionuclides, are provided. Moreover, a perspective of Mushrooms factors affecting the clinical signs of such toxicities (e.g. consumed species, the amount of eaten mushroom, Poisoning season, geographical location, method of preparation, and individual response to toxins) as well as mushroom Toxins toxins and approaches suggested to protect humans against mushroom poisoning, are presented. -
Severe but Reversible Acute Kidney Injury Resulting from Amanita Punctata Poisoning
Kidney Res Clin Pract 34 (2015) 233e236 Kidney Research and Clinical Practice journal homepage: http://www.krcp-ksn.com Contents lists available at ScienceDirect Case Report Severe but reversible acute kidney injury resulting from Amanita punctata poisoning Eunjung Kang, Ka-Young Cheong, Min-Jeong Lee, Seirhan Kim, Gyu-Tae Shin, * Heungsoo Kim, In-Whee Park Department of Nephrology, Ajou University School of Medicine, Suwon, Korea A BSTRACT Article history: Mushroom-related poisoning can cause acute kidney injury. Here we report a case Received 9 December 2014 of acute kidney injury after ingestion of Amanita punctata, which is considered an Received in revised form edible mushroom. Gastrointestinal symptoms occurred within 24 hours from the 30 March 2015 Accepted 27 May 2015 mushroom intake and were followed by an asymptomatic period, acute kidney Available online 29 July 2015 injury, and elevation of liver and pancreatic enzymes. Kidney function recovered with supportive care. Nephrotoxic mushroom poisoning should be considered as a Keywords: cause of acute kidney injury. Acute kidney injury Amanita punctata Copyright © 2015. The Korean Society of Nephrology. Published by Elsevier Ltd. This Mushroom poisoning is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Introduction intoxication (orellanine-containing mushrooms) is well known to cause severe irreversible renal failure. About 1,900 species of mushrooms grow in Korea. Among Amanita vaginata var punctata (A. punctata) belongs to genus them, 243 (13%) species are poisonous. Mushroom poisoning Amanita section Vaginatae as a variety of A. vaginata. It is occurs every year. Forty-eight cases of mushroom poisoning considered edible mushroom [3e6]. -
August-2005-Inoculum.Pdf
Supplement to Mycologia Vol. 56(4) August 2005 Newsletter of the Mycological Society of America — In This Issue — Fungal Cell Biology: Centerpiece for a New Department of Microbiology in Mexico Fungal Cell Biology: Centerpiece for a New Department By Meritxell Riquelme of Microbiology in Mexico . 1 With a strong emphasis on Fungal Cell Biology, a new De- Cordyceps Diversity partment of Microbiology was created at the Center for Scien- in Korea . 3 tific Research and Higher Education of Ensenada (CICESE) lo- MSA Business . 5 cated in Ensenada, a small city in the northwest of Baja Abstracts . 6 California, Mexico, 60 miles south of the Mexico-US border. Mycological News . 68 Founded in 1973, CICESE is one of the most prestigious re- search centers in the country conducting basic and applied re- Mycologist’s Bookshelf . 71 search and training both national and international graduate stu- Mycological Classifieds . 74 dents in the areas of Earth Science, Applied Physics and Mycology On-Line . 75 Oceanology. Just 2 years ago a new Experimental and Applied Calender of Events . 76 Biology Division was created under the direction of Salomon Sustaining Members . 78 Bartnicki-Garcia, who retired after 38 years as faculty member of the Department of Plant Pathology at the University of Cali- — Important Dates — fornia, Riverside and decided to move south to his country of origin to create a Division in an area that was not developed at August 15 Deadline: CICESE. The Experimental and Applied Biology Division is Inoculum 56(5) July 23-28, 2005: Continued on following page International Union of Microbiology Societies (Bacteriology and Applied Microbiology, Mycology, and Virology) July 30-August 5, 2005: MSA-MSJ, Hilo, HI August 15-19, 2005: International Congress on the Systematics and Ecology of Myxomycetes V Editor — Richard E.