Talin-Mediated Force Transmission and Talin Rod Domain Unfolding
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Wiskott-Aldrich Syndrome: the Actin Cytoskeleton and Immune Cell Function
Disease Markers 29 (2010) 157–175 157 DOI 10.3233/DMA-2010-0735 IOS Press The Wiskott-Aldrich syndrome: The actin cytoskeleton and immune cell function Michael P. Blundella, Austen Wortha,b, Gerben Boumaa and Adrian J. Thrashera,b,∗ aMolecular Immunology Unit, UCL Institute of Child Health, London, UK bDepartment of Immunology, Great Ormond Street Hospital NHS Trust, Great Ormond Street, London, UK Abstract. Wiskott-Aldrich syndrome (WAS) is a rare X-linked recessive primary immunodeficiency characterised by immune dysregulation, microthrombocytopaenia, eczema and lymphoid malignancies. Mutations in the WAS gene can lead to distinct syndrome variations which largely, although not exclusively, depend upon the mutation. Premature termination and deletions abrogate Wiskott-Aldrich syndrome protein (WASp) expression and lead to severe disease (WAS). Missense mutations usually result in reduced protein expression and the phenotypically milder X-linked thrombocytopenia (XLT) or attenuated WAS [1–3]. More recently however novel activating mutations have been described that give rise to X-linked neutropenia (XLN), a third syndrome defined by neutropenia with variable myelodysplasia [4–6]. WASP is key in transducing signals from the cell surface to the actin cytoskeleton, and a lack of WASp results in cytoskeletal defects that compromise multiple aspects of normal cellular activity including proliferation, phagocytosis, immune synapse formation, adhesion and directed migration. Keywords: Wiskott-Aldrich syndrome, actin polymerization, lymphocytes, -
Defining Functional Interactions During Biogenesis of Epithelial Junctions
ARTICLE Received 11 Dec 2015 | Accepted 13 Oct 2016 | Published 6 Dec 2016 | Updated 5 Jan 2017 DOI: 10.1038/ncomms13542 OPEN Defining functional interactions during biogenesis of epithelial junctions J.C. Erasmus1,*, S. Bruche1,*,w, L. Pizarro1,2,*, N. Maimari1,3,*, T. Poggioli1,w, C. Tomlinson4,J.Lees5, I. Zalivina1,w, A. Wheeler1,w, A. Alberts6, A. Russo2 & V.M.M. Braga1 In spite of extensive recent progress, a comprehensive understanding of how actin cytoskeleton remodelling supports stable junctions remains to be established. Here we design a platform that integrates actin functions with optimized phenotypic clustering and identify new cytoskeletal proteins, their functional hierarchy and pathways that modulate E-cadherin adhesion. Depletion of EEF1A, an actin bundling protein, increases E-cadherin levels at junctions without a corresponding reinforcement of cell–cell contacts. This unexpected result reflects a more dynamic and mobile junctional actin in EEF1A-depleted cells. A partner for EEF1A in cadherin contact maintenance is the formin DIAPH2, which interacts with EEF1A. In contrast, depletion of either the endocytic regulator TRIP10 or the Rho GTPase activator VAV2 reduces E-cadherin levels at junctions. TRIP10 binds to and requires VAV2 function for its junctional localization. Overall, we present new conceptual insights on junction stabilization, which integrate known and novel pathways with impact for epithelial morphogenesis, homeostasis and diseases. 1 National Heart and Lung Institute, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK. 2 Computing Department, Imperial College London, London SW7 2AZ, UK. 3 Bioengineering Department, Faculty of Engineering, Imperial College London, London SW7 2AZ, UK. 4 Department of Surgery & Cancer, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK. -
Bioinformatic Analysis of Structure and Function of LIM Domains of Human Zyxin Family Proteins
International Journal of Molecular Sciences Article Bioinformatic Analysis of Structure and Function of LIM Domains of Human Zyxin Family Proteins M. Quadir Siddiqui 1,† , Maulik D. Badmalia 1,† and Trushar R. Patel 1,2,3,* 1 Alberta RNA Research and Training Institute, Department of Chemistry and Biochemistry, University of Lethbridge, 4401 University Drive, Lethbridge, AB T1K 3M4, Canada; [email protected] (M.Q.S.); [email protected] (M.D.B.) 2 Department of Microbiology, Immunology and Infectious Disease, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive, Calgary, AB T2N 4N1, Canada 3 Li Ka Shing Institute of Virology, University of Alberta, Edmonton, AB T6G 2E1, Canada * Correspondence: [email protected] † These authors contributed equally to the work. Abstract: Members of the human Zyxin family are LIM domain-containing proteins that perform critical cellular functions and are indispensable for cellular integrity. Despite their importance, not much is known about their structure, functions, interactions and dynamics. To provide insights into these, we used a set of in-silico tools and databases and analyzed their amino acid sequence, phylogeny, post-translational modifications, structure-dynamics, molecular interactions, and func- tions. Our analysis revealed that zyxin members are ohnologs. Presence of a conserved nuclear export signal composed of LxxLxL/LxxxLxL consensus sequence, as well as a possible nuclear localization signal, suggesting that Zyxin family members may have nuclear and cytoplasmic roles. The molecular modeling and structural analysis indicated that Zyxin family LIM domains share Citation: Siddiqui, M.Q.; Badmalia, similarities with transcriptional regulators and have positively charged electrostatic patches, which M.D.; Patel, T.R. -
Biological Effect of the Interaction Between Mental Retardation Related Protein
生物化学与生物物理进展 ProgressinBiochemistryandBiophysics 2013,40(11):1124~1131 www.pibb.ac.cn BiologicalEffectofTheInteractionBetween MentalRetardationRelatedProtein (FXR1P)andCMAS* MAYun1)**,QINLing-Xue1)**,DONGXiao1),LIBin-Yuan1),WANGChang-Bo1), XUCan2),WANGSan-Hu1),HEShu-Ya1)*** (1) DepartmentofBiochemistry&Biology,UniversityofSouthChina,Hengyang 421001,China; 2) DepartmentofCardiologyofTheFisrtAffiliatedHospitalofUniversityofSouthChina,Hengyang 421001,China) Abstract FragileXsyndrome(FXS)isageneticmentalretardationdisease,withincidencesecondonlytotrisomy21syndrome. FragileXmentalretardationprotein(FMRP),isthecausativefactorofFXSandencodedbytheFragileXmentalretardation1(FMR1) gene,whichiswidelyexpressedincellsofthenerve,muscle,andtestes.FragileXrelatedprotein1(FXR1P)isencodedbya homologousgeneto FMR1———FragileXrelatedgene1(FXR1)andcaninteractwithproteinsandRNAs.Manyillnesseswere involvedinthealteredexpressionof FXR1.TounderstandthebiologicaleffectoftheinteractionbetweenFXR1PandCMAS,we constructedaFXR1 overexpressionvectorandinvestigateditsexpressioninPC12(theratpheochromocytoma)cellsandVSMC (vascularsmoothmusclecell)andtheeffectoftheoverexpressiononcellmorphologyandseveralcellprocessesrelatedto CMP-N-acetylneuraminicacidsynthetase(CMAS)activity.Wedemonstratethattheoverexpressionof FXR1 genecanincreaseactivity ofCMASinPC12cellsandprovideacertaindegreegrowthprotectionforthatcells.Thus,itsuggestsFXR1Pisatissue-specific regulatortoaltertheconcentrationofGM1inPC12cells,butnotinVSMC. Keywords FXR1P,CMAS,GM1,biologicaleffect,PC12,VSMC DOI:10.3724/SP.J.1206.2013.00004 -
Structural Basis of Thymosin-Β4/Profilin Exchange Leading to Actin Filament Polymerization
Structural basis of thymosin-β4/profilin exchange leading to actin filament polymerization Bo Xuea,1,2, Cedric Leyratb,1, Jonathan M. Grimesb,c, and Robert C. Robinsona,d aInstitute of Molecular and Cell Biology, A*STAR (Agency for Science, Technology and Research), Biopolis, Singapore 138673; bDivision of Structural Biology, Henry Wellcome Building for Genomic Medicine, Oxford, OX3 7BN, United Kingdom; cDiamond Light Source Ltd., Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom; and dDepartment of Biochemistry, National University of Singapore, Singapore 117597 Edited by Thomas D. Pollard, Yale University, New Haven, CT, and approved September 22, 2014 (received for review June 30, 2014) Thymosin-β4(Tβ4) and profilin are the two major sequestering shared between Tβ4 and profilin. During phases of polymeriza- proteins that maintain the pool of monomeric actin (G-actin) within tion, the profilin–actin complex gives up its actin to the elon- cells of higher eukaryotes. Tβ4 prevents G-actin from joining a fila- gating filaments. The liberated profilin competes with Tβ4 for its ment, whereas profilin:actin only supports barbed-end elongation. bound ATP–G-actin, effectively restoring the pool of polymeri- Here, we report two Tβ4:actin structures. The first structure shows zation-competent actin. On filament dissociation, ADP-actin is that Tβ4 has two helices that bind at the barbed and pointed faces preferentially sequestered by profiling because of the afore- of G-actin, preventing the incorporation of the bound G-actin into mentioned difference in its affinity toward profilin and Tβ4. In a filament. The second structure displays a more open nucleotide the profilin:actin complex, nucleotide exchange is enhanced, and binding cleft on G-actin, which is typical of profilin:actin structures, the resulting ATP-actin is subject to competition between pro- with a concomitant disruption of the Tβ4 C-terminal helix interac- filin and Tβ4, resulting in the restoration of the pool of Tβ4- tion. -
Alpha;-Actinin-4 Promotes Metastasis in Gastric Cancer
Laboratory Investigation (2017) 97, 1084–1094 © 2017 USCAP, Inc All rights reserved 0023-6837/17 α-Actinin-4 promotes metastasis in gastric cancer Xin Liu and Kent-Man Chu Metastasis increases the mortality rate of gastric cancer, which is the third leading cause of cancer-associated deaths worldwide. This study aims to identify the genes promoting metastasis of gastric cancer (GC). A human cell motility PCR array was used to analyze a pair of tumor and non-tumor tissue samples from a patient with stage IV GC (T3N3M1). Expression of the dysregulated genes was then evaluated in GC tissue samples (n = 10) and cell lines (n =6) via qPCR. Expression of α-actinin-4 (ACTN4) was validated in a larger sample size (n = 47) by qPCR, western blot and immunohistochemistry. Knockdown of ACTN4 with specific siRNAs was performed in GC cells, and adhesion assays, transwell invasion assays and migration assays were used to evaluate the function of these cells. Expression of potential targets of ACTN4 were then evaluated by qPCR. Thirty upregulated genes (greater than twofold) were revealed by the PCR array. We focused on ACTN4 because it was upregulated in 6 out of 10 pairs of tissue samples and 5 out of 6 GC cell lines. Further study indicated that ACTN4 was upregulated in 22/32 pairs of tissue samples at stage III & IV (P = 0.0069). Knockdown of ACTN4 in GC cells showed no significant effect on cell proliferation, but significantly increased cell-matrix adhesion, as well as reduced migration and invasion of AGS, MKN7 and NCI-N87 cells. -
Profilin and Formin Constitute a Pacemaker System for Robust Actin
RESEARCH ARTICLE Profilin and formin constitute a pacemaker system for robust actin filament growth Johanna Funk1, Felipe Merino2, Larisa Venkova3, Lina Heydenreich4, Jan Kierfeld4, Pablo Vargas3, Stefan Raunser2, Matthieu Piel3, Peter Bieling1* 1Department of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany; 2Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany; 3Institut Curie UMR144 CNRS, Paris, France; 4Physics Department, TU Dortmund University, Dortmund, Germany Abstract The actin cytoskeleton drives many essential biological processes, from cell morphogenesis to motility. Assembly of functional actin networks requires control over the speed at which actin filaments grow. How this can be achieved at the high and variable levels of soluble actin subunits found in cells is unclear. Here we reconstitute assembly of mammalian, non-muscle actin filaments from physiological concentrations of profilin-actin. We discover that under these conditions, filament growth is limited by profilin dissociating from the filament end and the speed of elongation becomes insensitive to the concentration of soluble subunits. Profilin release can be directly promoted by formin actin polymerases even at saturating profilin-actin concentrations. We demonstrate that mammalian cells indeed operate at the limit to actin filament growth imposed by profilin and formins. Our results reveal how synergy between profilin and formins generates robust filament growth rates that are resilient to changes in the soluble subunit concentration. DOI: https://doi.org/10.7554/eLife.50963.001 *For correspondence: peter.bieling@mpi-dortmund. mpg.de Introduction Competing interests: The Eukaryotic cells move, change their shape and organize their interior through dynamic actin net- authors declare that no works. -
Atlas Journal
Atlas of Genetics and Cytogenetics in Oncology and Haematology Home Genes Leukemias Tumors Cancer prone Deep Insight Case Reports Portal Journals Teaching X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA Atlas Journal Atlas Journal versus Atlas Database: the accumulation of the issues of the Journal constitutes the body of the Database/Text-Book. TABLE OF CONTENTS Volume 13, Number 7, July 2009 Previous Issue / Next Issue Genes ABL1 (v-abl Abelson murine leukemia viral oncogene homolog 1) (9q34.1) - updated. Ali G Turhan. Atlas Genet Cytogenet Oncol Haematol 2009; 13 (7): 757-766. [Full Text] [PDF] URL : http://atlasgeneticsoncology.org/Genes/ABL.html BCL2L12 (BCL2-like 12 (proline-rich)) (19q13.3). Christos Kontos, Hellinida Thomadaki, Andreas Scorilas. Atlas Genet Cytogenet Oncol Haematol 2009; 13 (7): 767-771. [Full Text] [PDF] URL : http://atlasgeneticsoncology.org/Genes/BCL2L12ID773ch19q13.html BCR (Breakpoint cluster region) (22q11.2) - updated. Ali G Turhan. Atlas Genet Cytogenet Oncol Haematol 2009; 13 (7): 772-779. [Full Text] [PDF] URL : http://atlasgeneticsoncology.org/Genes/BCR.html ENAH (enabled homolog (Drosophila)) (1q42.12). Paola Nisticò, Francesca Di Modugno. Atlas Genet Cytogenet Oncol Haematol 2009; 13 (7): 780-785. [Full Text] [PDF] URL : http://atlasgeneticsoncology.org/Genes/ENAHID44148ch1q42.html FGFR2 (fibroblast growth factor receptor 2) (10q26.13). Masaru Katoh. Atlas Genet Cytogenet Oncol Haematol 2009; 13 (7): 786-799. [Full Text] [PDF] URL : http://atlasgeneticsoncology.org/Genes/FGFR2ID40570ch10q26.html MAPK6 (mitogen-activated protein kinase 6) (15q21.2). Sylvain Meloche. Atlas Genet Cytogenet Oncol Haematol 2009; 13 (7): 800-804. -
Role and Regulation of the P53-Homolog P73 in the Transformation of Normal Human Fibroblasts
Role and regulation of the p53-homolog p73 in the transformation of normal human fibroblasts Dissertation zur Erlangung des naturwissenschaftlichen Doktorgrades der Bayerischen Julius-Maximilians-Universität Würzburg vorgelegt von Lars Hofmann aus Aschaffenburg Würzburg 2007 Eingereicht am Mitglieder der Promotionskommission: Vorsitzender: Prof. Dr. Dr. Martin J. Müller Gutachter: Prof. Dr. Michael P. Schön Gutachter : Prof. Dr. Georg Krohne Tag des Promotionskolloquiums: Doktorurkunde ausgehändigt am Erklärung Hiermit erkläre ich, dass ich die vorliegende Arbeit selbständig angefertigt und keine anderen als die angegebenen Hilfsmittel und Quellen verwendet habe. Diese Arbeit wurde weder in gleicher noch in ähnlicher Form in einem anderen Prüfungsverfahren vorgelegt. Ich habe früher, außer den mit dem Zulassungsgesuch urkundlichen Graden, keine weiteren akademischen Grade erworben und zu erwerben gesucht. Würzburg, Lars Hofmann Content SUMMARY ................................................................................................................ IV ZUSAMMENFASSUNG ............................................................................................. V 1. INTRODUCTION ................................................................................................. 1 1.1. Molecular basics of cancer .......................................................................................... 1 1.2. Early research on tumorigenesis ................................................................................. 3 1.3. Developing -
Force-Independent Interactions of Talin and Vinculin Govern Integrin-Mediated Mechanotransduction
bioRxiv preprint doi: https://doi.org/10.1101/629683; this version posted May 7, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Force-independent interactions of talin and vinculin govern integrin-mediated mechanotransduction Paul Atherton1, Franziska Lausecker1, Alexandre Carisey1, Andrew Gilmore1, David Critchley2, Igor Barsukov3, and Christoph Ballestrem1, 1Wellcome Trust Centre for Cell-Matrix Research, University of Manchester, Manchester M13 9PT, UK. 2Department of Biochemistry, University of Leicester, Lancaster Road, Leicester LE1 9HN, UK. 3Institute of Integrative Biology, University of Liverpool, BioSciences Building, Crown Street, Liverpool L69 7ZB, UK. Talin, vinculin and paxillin are core components of the dy- C-terminal D5 tail domain (Vt) that masks the talin binding namic link between integrins and actomyosin. Here we study site in the D1 domain (Cohen et al., 2005). Furthermore, a the mechanisms that mediate their activation and association FRET conformation sensor has shown that vinculin is in an using a mitochondrial-targeting assay, structure-based mutants, open conformation within FAs (Chen et al., 2005). For talin, and advanced microscopy. As expected, full-length vinculin and the primary auto-inhibitory interaction is between the F3 do- talin are auto-inhibited and do not interact with each other in main of the N-terminal FERM domain and R9, one of the this state. Contrary to previous models that propose a critical 13 -helical bundles (R1-R13) in the flexible C-terminal rod role for forces driving talin-vinculin association, our data show a that force-independent relief of auto-inhibition is sufficient to (Calderwood et al., 2013). -
Downregulation of Glial Genes Involved in Synaptic Function
RESEARCH ARTICLE Downregulation of glial genes involved in synaptic function mitigates Huntington’s disease pathogenesis Tarik Seref Onur1,2,3†, Andrew Laitman2,4,5†, He Zhao2, Ryan Keyho2, Hyemin Kim2, Jennifer Wang2, Megan Mair1,2,3, Huilan Wang6, Lifang Li1,2, Alma Perez2, Maria de Haro1,2, Ying-Wooi Wan2, Genevera Allen2,7, Boxun Lu6, Ismael Al-Ramahi1,2, Zhandong Liu2,4,5, Juan Botas1,2,3,4* 1Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States; 2Jan and Dan Duncan Neurological Research Institute at Texas Children’s Hospital, Houston, United States; 3Genetics & Genomics Graduate Program, Baylor College of Medicine, Houston, United States; 4Quantitative & Computational Biosciences, Baylor College of Medicine, Houston, United States; 5Department of Pediatrics, Baylor College of Medicine, Houston, United States; 6State Key Laboratory of Medical Neurobiology and MOE Frontiers Center for Brain Science, Fudan University, Shanghai, China; 7Departments of Electrical & Computer Engineering, Statistics and Computer Science, Rice University, Houston, United States Abstract Most research on neurodegenerative diseases has focused on neurons, yet glia help form and maintain the synapses whose loss is so prominent in these conditions. To investigate the contributions of glia to Huntington’s disease (HD), we profiled the gene expression alterations of *For correspondence: Drosophila expressing human mutant Huntingtin (mHTT) in either glia or neurons and compared [email protected] these changes to what is observed in HD human and HD mice striata. A large portion of conserved genes are concordantly dysregulated across the three species; we tested these genes in a high- †These authors contributed throughput behavioral assay and found that downregulation of genes involved in synapse assembly equally to this work mitigated pathogenesis and behavioral deficits. -
Loss of Mouse Cardiomyocyte Talin-1 and Talin-2 Leads to Β-1 Integrin
Loss of mouse cardiomyocyte talin-1 and talin-2 leads PNAS PLUS to β-1 integrin reduction, costameric instability, and dilated cardiomyopathy Ana Maria Mansoa,b,1, Hideshi Okadaa,b, Francesca M. Sakamotoa, Emily Morenoa, Susan J. Monkleyc, Ruixia Lia, David R. Critchleyc, and Robert S. Rossa,b,1 aDivision of Cardiology, Department of Medicine, University of California at San Diego School of Medicine, La Jolla, CA 92093; bCardiology Section, Department of Medicine, Veterans Administration Healthcare, San Diego, CA 92161; and cDepartment of Molecular Cell Biology, University of Leicester, Leicester LE1 9HN, United Kingdom Edited by Kevin P. Campbell, Howard Hughes Medical Institute, University of Iowa, Iowa City, IA, and approved May 30, 2017 (received for review January 26, 2017) Continuous contraction–relaxation cycles of the heart require ognized as key mechanotransducers, converting mechanical per- strong and stable connections of cardiac myocytes (CMs) with turbations to biochemical signals (5, 6). the extracellular matrix (ECM) to preserve sarcolemmal integrity. The complex of proteins organized by integrins has been most CM attachment to the ECM is mediated by integrin complexes commonly termed focal adhesions (FA) by studies performed in localized at the muscle adhesion sites termed costameres. The cells such as fibroblasts in a 2D environment. It is recognized that ubiquitously expressed cytoskeletal protein talin (Tln) is a compo- this structure is important for organizing and regulating the me- nent of muscle costameres that links integrins ultimately to the chanical and signaling events that occur upon cellular adhesion to sarcomere. There are two talin genes, Tln1 and Tln2. Here, we ECM (7, 8).