Review of Hair Cell Synapse Defects in Sensorineural Hearing Impairment
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PLATFORM ABSTRACTS Abstract Abstract Numbers Numbers Tuesday, November 6 41
American Society of Human Genetics 62nd Annual Meeting November 6–10, 2012 San Francisco, California PLATFORM ABSTRACTS Abstract Abstract Numbers Numbers Tuesday, November 6 41. Genes Underlying Neurological Disease Room 134 #196–#204 2. 4:30–6:30pm: Plenary Abstract 42. Cancer Genetics III: Common Presentations Hall D #1–#6 Variants Ballroom 104 #205–#213 43. Genetics of Craniofacial and Wednesday, November 7 Musculoskeletal Disorders Room 124 #214–#222 10:30am–12:45 pm: Concurrent Platform Session A (11–19): 44. Tools for Phenotype Analysis Room 132 #223–#231 11. Genetics of Autism Spectrum 45. Therapy of Genetic Disorders Room 130 #232–#240 Disorders Hall D #7–#15 46. Pharmacogenetics: From Discovery 12. New Methods for Big Data Ballroom 103 #16–#24 to Implementation Room 123 #241–#249 13. Cancer Genetics I: Rare Variants Room 135 #25–#33 14. Quantitation and Measurement of Friday, November 9 Regulatory Oversight by the Cell Room 134 #34–#42 8:00am–10:15am: Concurrent Platform Session D (47–55): 15. New Loci for Obesity, Diabetes, and 47. Structural and Regulatory Genomic Related Traits Ballroom 104 #43–#51 Variation Hall D #250–#258 16. Neuromuscular Disease and 48. Neuropsychiatric Disorders Ballroom 103 #259–#267 Deafness Room 124 #52–#60 49. Common Variants, Rare Variants, 17. Chromosomes and Disease Room 132 #61–#69 and Everything in-Between Room 135 #268–#276 18. Prenatal and Perinatal Genetics Room 130 #70–#78 50. Population Genetics Genome-Wide Room 134 #277–#285 19. Vascular and Congenital Heart 51. Endless Forms Most Beautiful: Disease Room 123 #79–#87 Variant Discovery in Genomic Data Ballroom 104 #286–#294 52. -
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8358 • The Journal of Neuroscience, June 11, 2014 • 34(24):8358–8372 Cellular/Molecular Specialized Postsynaptic Morphology Enhances Neurotransmitter Dilution and High-Frequency Signaling at an Auditory Synapse Cole W. Graydon,1,2* Soyoun Cho,3* Jeffrey S. Diamond,1 Bechara Kachar,2 Henrique von Gersdorff,3 and William N. Grimes1,4 1Synaptic Physiology Section, National Institute of Neurological Disorders and Stroke, and 2Section on Structural Cell Biology, National Institute on Deafness and Other Communication Disorders, Bethesda, Maryland 20892, 3Vollum Institute, Oregon Health & Science University, Portland, Oregon 97239, and 4Howard Hughes Medical Institute/University of Washington, Department of Biophysics and Physiology, Seattle, Washington 98195 Sensory processing in the auditory system requires that synapses, neurons, and circuits encode information with particularly high temporalandspectralprecision.Intheamphibianpapillia,soundfrequenciesupto1kHzareencodedalongatonotopicarrayofhaircells and transmitted to afferent fibers via fast, repetitive synaptic transmission, thereby promoting phase locking between the presynaptic and postsynaptic cells. Here, we have combined serial section electron microscopy, paired electrophysiological recordings, and Monte Carlo diffusion simulations to examine novel mechanisms that facilitate fast synaptic transmission in the inner ear of frogs (Rana catesbeiana and Rana pipiens). Three-dimensional anatomical reconstructions reveal specialized spine-like contacts between individual afferent fibers and -
Hearing Loss Epidemic the Hair Cell
Hearing loss epidemic One in ten (30 million) Americans has hearing loss FUTURE THERAPIES FOR INNER - Causes include heredity, aging, noise exposure, disease EAR REGENERATION - Number is expected to double by 2030 Hearing loss is the #1 birth defect in America Albert Edge - 1 in 1000 newborns is born profoundly deaf Harvard Medical School - 2-3/1000 will have partial/progressive hearing loss Massachusetts Eye and Ear Infirmary Hearing loss prevalence increases with age - 1 in 3 over 65 years has significant hearing loss - Among seniors, hearing loss is the 3rd most prevalent condition 2 The inner ear The hair cell Auditory Hair Bundle Nerve Middle Ear Sensory hairs vibrate, "tip-links"open ion channels into hair cell Ions flow into hair cell, Inner Ear changing its electrical potential Hair External Ear Cells 3 4 1 The nerve fiber Sensorineural hearing loss: Hair cells and nerve fibers Cochlear Implant can directly stimulate Electric potential causes chemical neurotransmitter release from synapse Sensory Cell Loss NeurotransmitterNeurotransmitter diffuses to nerve fiber and excites electrical activity in the form of action potentials Hair Cell Nerve Fiber Loss 5 6 Regeneration of hair cells in chick inner ear Can stem cell-derived inner ear progenitors replace lost hair cells in vivo (and restore hearing)? Normal Hair Cells Damaged Hair Cells Regenerated Hair Cell Bundles Li et al., TMM (2004) 2 Approaches to regenerating inner ear cells Gene therapy I. Generation of inner ear cells by gene therapy • New hair cells: transfer Atoh1 gene II. -
A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
Noninvasive Sleep Monitoring in Large-Scale Screening of Knock-Out Mice
bioRxiv preprint doi: https://doi.org/10.1101/517680; this version posted January 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. Noninvasive sleep monitoring in large-scale screening of knock-out mice reveals novel sleep-related genes Shreyas S. Joshi1*, Mansi Sethi1*, Martin Striz1, Neil Cole2, James M. Denegre2, Jennifer Ryan2, Michael E. Lhamon3, Anuj Agarwal3, Steve Murray2, Robert E. Braun2, David W. Fardo4, Vivek Kumar2, Kevin D. Donohue3,5, Sridhar Sunderam6, Elissa J. Chesler2, Karen L. Svenson2, Bruce F. O'Hara1,3 1Dept. of Biology, University of Kentucky, Lexington, KY 40506, USA, 2The Jackson Laboratory, Bar Harbor, ME 04609, USA, 3Signal solutions, LLC, Lexington, KY 40503, USA, 4Dept. of Biostatistics, University of Kentucky, Lexington, KY 40536, USA, 5Dept. of Electrical and Computer Engineering, University of Kentucky, Lexington, KY 40506, USA. 6Dept. of Biomedical Engineering, University of Kentucky, Lexington, KY 40506, USA. *These authors contributed equally Address for correspondence and proofs: Shreyas S. Joshi, Ph.D. Dept. of Biology University of Kentucky 675 Rose Street 101 Morgan Building Lexington, KY 40506 U.S.A. Phone: (859) 257-2805 FAX: (859) 257-1717 Email: [email protected] Running title: Sleep changes in knockout mice bioRxiv preprint doi: https://doi.org/10.1101/517680; this version posted January 11, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Intrinsically Different Retinal Progenitor Cells Produce Specific Types Of
PERSPECTIVES These clonal data demonstrated that OPINION RPCs are generally multipotent. However, these data could not determine whether Intrinsically different retinal the variability in clones was due to intrinsic differences among RPCs or extrinsic and/ progenitor cells produce specific or stochastic effects on equivalent RPCs or their progeny. Furthermore, the fates identi- fied within a clone demonstrated an RPC’s types of progeny ‘potential’ but not the ability of an RPC to make a specific cell type at a specific devel- Connie Cepko opmental time or its ‘competence’ (BOX 2). Moreover, although many genes that regu- Abstract | Lineage studies conducted in the retina more than 25 years ago late the development of retinal cell types demonstrated the multipotency of retinal progenitor cells (RPCs). The number have been studied, using the now classical and types of cells produced by individual RPCs, even from a single time point in gain- and loss‑of‑function approaches18,19, development, were found to be highly variable. This raised the question of the precise roles of such regulators in defin- whether this variability was due to intrinsic differences among RPCs or to extrinsic ing an RPC’s competence or potential have not been well elucidated, as most studies and/or stochastic effects on equivalent RPCs or their progeny. Newer lineage have examined the outcome of a perturba- studies that have made use of molecular markers of RPCs, retrovirus-mediated tion on the development of a cell type but lineage analyses of specific RPCs and live imaging have begun to provide answers not the stage and/or cell type in which such a to this question. -
The Glutamate–Aspartate Transporter GLAST Mediates Glutamate Uptake at Inner Hair Cell Afferent Synapses in the Mammalian Cochlea
The Journal of Neuroscience, July 19, 2006 • 26(29):7659–7664 • 7659 Brief Communications The Glutamate–Aspartate Transporter GLAST Mediates Glutamate Uptake at Inner Hair Cell Afferent Synapses in the Mammalian Cochlea Elisabeth Glowatzki,1 Ning Cheng,2 Hakim Hiel,1 Eunyoung Yi,1 Kohichi Tanaka,4 Graham C. R. Ellis-Davies,5 Jeffrey D. Rothstein,3 and Dwight E. Bergles1,2 Departments of 1Otolaryngology–Head and Neck Surgery, 2Neuroscience, and 3Neurology, Johns Hopkins University, Baltimore, Maryland 21205, 4Laboratory of Molecular Neuroscience, School of Biomedical Science and Medical Research Institute, Tokyo Medical and Dental University, Tokyo 113- 8510, Japan, and 5Department of Pharmacology and Physiology, Drexel University College of Medicine, Philadelphia, Pennsylvania 19102 Ribbon synapses formed between inner hair cells (IHCs) and afferent dendrites in the mammalian cochlea can sustain high rates of release, placing strong demands on glutamate clearance mechanisms. To investigate the role of transporters in glutamate removal at these synapses, we made whole-cell recordings from IHCs, afferent dendrites, and glial cells adjacent to IHCs [inner phalangeal cells (IPCs)] in whole-mount preparations of rat organ of Corti. Focal application of the transporter substrate D-aspartate elicited inward currents in IPCs, which were larger in the presence of anions that permeate the transporter-associated anion channel and blocked by the transporter antagonist D,L-threo--benzyloxyaspartate. These currents were produced by glutamate–aspartate transporters (GLAST) (excitatory amino acid transporter 1) because they were weakly inhibited by dihydrokainate, an antagonist of glutamate transporter-1 Ϫ/Ϫ (excitatory amino acid transporter 2) and were absent from IPCs in GLAST cochleas. -
Cells of Adult Brain Germinal Zone Have Properties Akin to Hair Cells and Can Be Used to Replace Inner Ear Sensory Cells After Damage
Cells of adult brain germinal zone have properties akin to hair cells and can be used to replace inner ear sensory cells after damage Dongguang Weia,1, Snezana Levica, Liping Niea, Wei-qiang Gaob, Christine Petitc, Edward G. Jonesa, and Ebenezer N. Yamoaha,1 aDepartment of Anesthesiology and Pain Medicine, Center for Neuroscience, Program in Communication and Sensory Science, University of California, 1544 Newton Court, Davis, CA 95618; bDepartment of Molecular Biology, Genentech, Inc., South San Francisco, CA 94080; and cUnite´deGe´ne´ tique et Physiologie de l’Audition, Unite´Mixte de Recherche S587, Institut National de la Sante´et de la Recherche Me´dicale-Universite´Paris VI, Colle`ge de France, Institut Pasteur, 25 Rue du Dr Roux, 75724 Paris, Cedex 15, France Edited by David Julius, University of California, San Francisco, CA, and approved October 27, 2008 (received for review August 15, 2008) Auditory hair cell defect is a major cause of hearing impairment, often and have an actin-filled process as in the HCs. Thus, we surmise that leading to spiral ganglia neuron (SGN) degeneration. The cell loss that cells of the adult forebrain germinal zone might be potential follows is irreversible in mammals, because inner ear hair cells (HCs) candidate cells to be used autologously for the replacement of have a limited capacity to regenerate. Here, we report that in the nonrenewable HCs and SGNs. adult brain of both rodents and humans, the ependymal layer of the Ependymal cells adjacent to the spinal canal proliferate exten- lateral ventricle contains cells with proliferative potential, which sively upon spinal cord injuries (16, 17). -
Lack of Fractalkine Receptor on Macrophages Impairs Spontaneous Recovery of Ribbon Synapses After Moderate Noise Trauma in C57BL/6 Mice Tejbeer Kaur
Washington University School of Medicine Digital Commons@Becker Open Access Publications 2019 Lack of fractalkine receptor on macrophages impairs spontaneous recovery of ribbon synapses after moderate noise trauma in C57BL/6 mice Tejbeer Kaur Anna C. Clayman Andrew J. Nash Angela D. Schrader Mark E. Warchol See next page for additional authors Follow this and additional works at: https://digitalcommons.wustl.edu/open_access_pubs Authors Tejbeer Kaur, Anna C. Clayman, Andrew J. Nash, Angela D. Schrader, Mark E. Warchol, and Kevin K. Ohlemiller fnins-13-00620 June 12, 2019 Time: 17:26 # 1 ORIGINAL RESEARCH published: 13 June 2019 doi: 10.3389/fnins.2019.00620 Lack of Fractalkine Receptor on Macrophages Impairs Spontaneous Recovery of Ribbon Synapses After Moderate Noise Trauma in C57BL/6 Mice Tejbeer Kaur1*, Anna C. Clayman2, Andrew J. Nash2, Angela D. Schrader1, Mark E. Warchol1 and Kevin K. Ohlemiller1,2 1 Department of Otolaryngology, Washington University School of Medicine, St. Louis, MO, United States, 2 Program in Audiology and Communication Sciences, Washington University School of Medicine, St. Louis, MO, United States Noise trauma causes loss of synaptic connections between cochlear inner hair cells (IHCs) and the spiral ganglion neurons (SGNs). Such synaptic loss can trigger slow and progressive degeneration of SGNs. Macrophage fractalkine signaling is critical for neuron survival in the injured cochlea, but its role in cochlear synaptopathy is Edited by: unknown. Fractalkine, a chemokine, is constitutively expressed by SGNs and signals Isabel Varela-Nieto, via its receptor CX3CR1 that is expressed on macrophages. The present study Spanish National Research Council characterized the immune response and examined the function of fractalkine signaling (CSIC), Spain in degeneration and repair of cochlear synapses following noise trauma. -
Smelling Better with Chloride COMMENTARY Stephan Fringsa,1
COMMENTARY Smelling better with chloride COMMENTARY Stephan Fringsa,1 The sense of smell and its astonishing performance coding is the solution to the problem of low-selectivity pose biologists with ever new riddles. How can the receptors (2). system smell almost anything that gets into the nose, However, the necessity to operate OSNs with fuzzy distinguish it from countless other odors, memorize odorant receptors creates another problem, as it limits it forever, and trigger reliably adequate behavior? the efficacy of the transduction process. OSNs trans- Among the senses, the olfactory system always duce chemical signals through a metabotropic path- seems to do things differently. The olfactory sensory way (Fig. 1A). Such pathways translate external stimuli neurons (OSNs) in the nose were suggested to use an into cellular responses by G-protein–coupled recep- unusual way of signal amplification to help them in tors. Their efficacy depends on the duration of recep- responding to weak stimuli. This chloride-based tor activity: the longer the receptor is switched on, the mechanism is somewhat enigmatic and controversial. more G protein can be activated. This is well studied in A team of sensory physiologists from The Johns photoreceptors, where the rhodopsin molecule may Hopkins University School of Medicine has now de- stay active for more than a second after absorbing a veloped a method to study this process in detail. photon. Within this time, it can activate hundreds of G Li et al. (1) demonstrate how OSNs amplify their proteins, one after the other, thus eliciting a robust electrical response to odor stimulation using chlo- cellular response to a single photon. -
Whole Exome Sequencing in Families at High Risk for Hodgkin Lymphoma: Identification of a Predisposing Mutation in the KDR Gene
Hodgkin Lymphoma SUPPLEMENTARY APPENDIX Whole exome sequencing in families at high risk for Hodgkin lymphoma: identification of a predisposing mutation in the KDR gene Melissa Rotunno, 1 Mary L. McMaster, 1 Joseph Boland, 2 Sara Bass, 2 Xijun Zhang, 2 Laurie Burdett, 2 Belynda Hicks, 2 Sarangan Ravichandran, 3 Brian T. Luke, 3 Meredith Yeager, 2 Laura Fontaine, 4 Paula L. Hyland, 1 Alisa M. Goldstein, 1 NCI DCEG Cancer Sequencing Working Group, NCI DCEG Cancer Genomics Research Laboratory, Stephen J. Chanock, 5 Neil E. Caporaso, 1 Margaret A. Tucker, 6 and Lynn R. Goldin 1 1Genetic Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD; 2Cancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD; 3Ad - vanced Biomedical Computing Center, Leidos Biomedical Research Inc.; Frederick National Laboratory for Cancer Research, Frederick, MD; 4Westat, Inc., Rockville MD; 5Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD; and 6Human Genetics Program, Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, MD, USA ©2016 Ferrata Storti Foundation. This is an open-access paper. doi:10.3324/haematol.2015.135475 Received: August 19, 2015. Accepted: January 7, 2016. Pre-published: June 13, 2016. Correspondence: [email protected] Supplemental Author Information: NCI DCEG Cancer Sequencing Working Group: Mark H. Greene, Allan Hildesheim, Nan Hu, Maria Theresa Landi, Jennifer Loud, Phuong Mai, Lisa Mirabello, Lindsay Morton, Dilys Parry, Anand Pathak, Douglas R. Stewart, Philip R. Taylor, Geoffrey S. Tobias, Xiaohong R. Yang, Guoqin Yu NCI DCEG Cancer Genomics Research Laboratory: Salma Chowdhury, Michael Cullen, Casey Dagnall, Herbert Higson, Amy A. -
The Genetic Relationship Between Paroxysmal Movement Disorders and Epilepsy
Review article pISSN 2635-909X • eISSN 2635-9103 Ann Child Neurol 2020;28(3):76-87 https://doi.org/10.26815/acn.2020.00073 The Genetic Relationship between Paroxysmal Movement Disorders and Epilepsy Hyunji Ahn, MD, Tae-Sung Ko, MD Department of Pediatrics, Asan Medical Center Children’s Hospital, University of Ulsan College of Medicine, Seoul, Korea Received: May 1, 2020 Revised: May 12, 2020 Seizures and movement disorders both involve abnormal movements and are often difficult to Accepted: May 24, 2020 distinguish due to their overlapping phenomenology and possible etiological commonalities. Par- oxysmal movement disorders, which include three paroxysmal dyskinesia syndromes (paroxysmal Corresponding author: kinesigenic dyskinesia, paroxysmal non-kinesigenic dyskinesia, paroxysmal exercise-induced dys- Tae-Sung Ko, MD kinesia), hemiplegic migraine, and episodic ataxia, are important examples of conditions where Department of Pediatrics, Asan movement disorders and seizures overlap. Recently, many articles describing genes associated Medical Center Children’s Hospital, University of Ulsan College of with paroxysmal movement disorders and epilepsy have been published, providing much infor- Medicine, 88 Olympic-ro 43-gil, mation about their molecular pathology. In this review, we summarize the main genetic disorders Songpa-gu, Seoul 05505, Korea that results in co-occurrence of epilepsy and paroxysmal movement disorders, with a presenta- Tel: +82-2-3010-3390 tion of their genetic characteristics, suspected pathogenic mechanisms, and detailed descriptions Fax: +82-2-473-3725 of paroxysmal movement disorders and seizure types. E-mail: [email protected] Keywords: Dyskinesias; Movement disorders; Seizures; Epilepsy Introduction ies, and paroxysmal dyskinesias [3,4]. Paroxysmal dyskinesias are an important disease paradigm asso- Movement disorders often arise from the basal ganglia nuclei or ciated with overlapping movement disorders and seizures [5].