Clinical Genetic Molecular Biologist Scientist Program
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A Comprehensive Framework to Reinforce Evidence Synthesis Features in Cloud-Based Systematic Review Tools
applied sciences Article A Comprehensive Framework to Reinforce Evidence Synthesis Features in Cloud-Based Systematic Review Tools Tatiana Person 1,* , Iván Ruiz-Rube 1 , José Miguel Mota 1 , Manuel Jesús Cobo 1 , Alexey Tselykh 2 and Juan Manuel Dodero 1 1 Department of Informatics Engineering, University of Cadiz, 11519 Puerto Real, Spain; [email protected] (I.R.-R.); [email protected] (J.M.M.); [email protected] (M.J.C.); [email protected] (J.M.D.) 2 Department of Information and Analytical Security Systems, Institute of Computer Technologies and Information Security, Southern Federal University, 347922 Taganrog, Russia; [email protected] * Correspondence: [email protected] Abstract: Systematic reviews are powerful methods used to determine the state-of-the-art in a given field from existing studies and literature. They are critical but time-consuming in research and decision making for various disciplines. When conducting a review, a large volume of data is usually generated from relevant studies. Computer-based tools are often used to manage such data and to support the systematic review process. This paper describes a comprehensive analysis to gather the required features of a systematic review tool, in order to support the complete evidence synthesis process. We propose a framework, elaborated by consulting experts in different knowledge areas, to evaluate significant features and thus reinforce existing tool capabilities. The framework will be used to enhance the currently available functionality of CloudSERA, a cloud-based systematic review Citation: Person, T.; Ruiz-Rube, I.; Mota, J.M.; Cobo, M.J.; Tselykh, A.; tool focused on Computer Science, to implement evidence-based systematic review processes in Dodero, J.M. -
Molecular Biology for Computer Scientists
CHAPTER 1 Molecular Biology for Computer Scientists Lawrence Hunter “Computers are to biology what mathematics is to physics.” — Harold Morowitz One of the major challenges for computer scientists who wish to work in the domain of molecular biology is becoming conversant with the daunting intri- cacies of existing biological knowledge and its extensive technical vocabu- lary. Questions about the origin, function, and structure of living systems have been pursued by nearly all cultures throughout history, and the work of the last two generations has been particularly fruitful. The knowledge of liv- ing systems resulting from this research is far too detailed and complex for any one human to comprehend. An entire scientific career can be based in the study of a single biomolecule. Nevertheless, in the following pages, I attempt to provide enough background for a computer scientist to understand much of the biology discussed in this book. This chapter provides the briefest of overviews; I can only begin to convey the depth, variety, complexity and stunning beauty of the universe of living things. Much of what follows is not about molecular biology per se. In order to 2ARTIFICIAL INTELLIGENCE & MOLECULAR BIOLOGY explain what the molecules are doing, it is often necessary to use concepts involving, for example, cells, embryological development, or evolution. Bi- ology is frustratingly holistic. Events at one level can effect and be affected by events at very different levels of scale or time. Digesting a survey of the basic background material is a prerequisite for understanding the significance of the molecular biology that is described elsewhere in the book. -
Outline of Science
Outline of science The following outline is provided as a topical overview of • Empirical method – science: • Experimental method – The steps involved in order Science – systematic effort of acquiring knowledge— to produce a reliable and logical conclusion include: through observation and experimentation coupled with logic and reasoning to find out what can be proved or 1. Asking a question about a natural phenomenon not proved—and the knowledge thus acquired. The word 2. Making observations of the phenomenon “science” comes from the Latin word “scientia” mean- 3. Forming a hypothesis – proposed explanation ing knowledge. A practitioner of science is called a for a phenomenon. For a hypothesis to be a "scientist". Modern science respects objective logical rea- scientific hypothesis, the scientific method re- soning, and follows a set of core procedures or rules in or- quires that one can test it. Scientists generally der to determine the nature and underlying natural laws of base scientific hypotheses on previous obser- the universe and everything in it. Some scientists do not vations that cannot satisfactorily be explained know of the rules themselves, but follow them through with the available scientific theories. research policies. These procedures are known as the 4. Predicting a logical consequence of the hy- scientific method. pothesis 5. Testing the hypothesis through an experiment – methodical procedure carried out with the 1 Essence of science goal of verifying, falsifying, or establishing the validity of a hypothesis. The 3 types of -
Principal Scientist, Pharmacology (DMPK) at Entrada Therapeutics Full-Time Opportunity in Boston, MA
Principal Scientist, Pharmacology (DMPK) at Entrada Therapeutics Full-Time Opportunity in Boston, MA Company Overview Entrada Therapeutics is a biotechnology company dedicated to transforming the treatment of devastating diseases through the intracellular delivery of biologics. Entrada’s technology enables the efficient intracellular delivery of proteins, peptides and nucleic acids, thus allowing for the development of programs across several intracellular target classes. The Company’s novel approach addresses current challenges associated with both large and small molecule therapeutics and represents a fundamental advancement in the delivery of molecules into the cytosol. Entrada is comprised of experts and leaders in both biologics development and the rare disease space. In December 2018, Entrada closed a $59 million Series A from 5AM Ventures, MPM Capital, Roche Venture Fund, MRL Ventures Fund and Agent Capital. Position Summary Entrada is hiring for a highly motivated, collaborative and innovative Principal Scientist, specializing in pharmacokinetics and pharmacology to join the Company’s intracellular biologics discovery and development efforts. The candidate will work with a world-class, multidisciplinary team of drug discovery scientists and lead the in vitro and in vivo ADME, PK, PD and toxicokinetic efforts. Specifically, the candidate will design, manage and execute in vitro and in vivo programs both in- house and at contract research organizations. The candidate will also be responsible for analyzing, interpreting and modeling -
How to Become a Marine Biologist
How to Become a Marine Biologist If you like working in a variety of places, enjoy research and interacting with animals, like math and science, have initiative and can handle working in different conditions you might want to be a Marine Biologist Other advancements or career choices (professor, researcher, PhD etc) A Masters degree will allow you to specialize in marine biological fields like marine mammals or fisheries. You can also go straight from Marine Biologist Your PhD work should include your Masters to your PhD. field research, conferences and publications. Take as many science and math classes as possible. Also look for summer Masters camps and volunteer opportunities to get experience in the field. Reach out to local researchers. College Bachelor's degree in Biology, Marine Science, Oceanography, Fisheries, or other related fields High School Look for internships and field Middle School experience for the summer Attend science camps and other outdoor Attend and present at professional opportunities. Locate researchers doing conferences and try to publish interesting things and open communication your research. with them * Different marine biologist jobs may have more or less requirements. This is a generalized example to get you started on the right path. Marine Biologist Job Description: A marine biologist studies plants and animals that live in the ocean, their behavior and adaptations, roles in the food chain, and how humans can effect these organisms. They often concentrate on a specific organism or habitat. Marine biologists can work out in a field, lab, or in an office depending on the work they are conducting. -
How Science Works
PB 1 How science works The Scientific Method is traditionally presented in the first chapter of science text- books as a simple recipe for performing scientific investigations. Though many use- ful points are embodied in this method, it can easily be misinterpreted as linear and “cookbook”: pull a problem off the shelf, throw in an observation, mix in a few ques- tions, sprinkle on a hypothesis, put the whole mixture into a 350° experiment—and voila, 50 minutes later you’ll be pulling a conclusion out of the oven! That might work if science were like Hamburger Helper®, but science is complex and cannot be re- duced to a single, prepackaged recipe. The linear, stepwise representation of the process of science is simplified, but it does get at least one thing right. It captures the core logic of science: testing ideas with evidence. However, this version of the scientific method is so simplified and rigid that it fails to accurately portray how real science works. It more accurately describes how science is summarized after the fact—in textbooks and journal articles—than how sci- ence is actually done. The simplified, linear scientific method implies that scientific studies follow an unvarying, linear recipe. But in reality, in their work, scientists engage in many different activities in many different sequences. Scientific investigations often involve repeating the same steps many times to account for new information and ideas. The simplified, linear scientific method implies that science is done by individual scientists working through these steps in isolation. But in reality, science depends on interactions within the scientific community. -
Résumé Writing: Summary/Profile Examples
Résumé Writing: Summary/Profile Examples Dedicated, versatile biochemist with extensive experience in protein research. Special expertise in recombinant protein purification and characterization from eukaryotic and prokaryotic systems. Solid background in enzymology and structural biology. Key skills include: • Working on own initiative and quickly adapting to new projects • Presenting information clearly and concisely in both verbal and written form • Effectively collaborating in a diverse team environment Well-rounded molecular biologist with a background in microbiology, cell biology and bioinformatics. Broad range of experience in mammalian, bacterial, and viral systems. Proficient in assay development and troubleshooting complex systems. Team player with solid written and oral communication skills anchored by a strong publication record. Inflammation scientist with over 8 years multidisciplinary research experience with emphasis on developing excellent communication skills. Key qualifications: • Equally capable of working independently & as an adaptable team member • Skilled at managing, analyzing, and presenting data to a wide variety of audiences • Proven leadership & supervisory abilities, developed through mentoring graduate students, coordinating institute-wide events, and leading journal clubs Protein crystallographer with a background in human kinases, therapeutic antibodies, retroviral proteases and membrane proteins. Extensive experience in protein biochemistry, crystallization and structure determination, expertise in structure-based -
Certified Wildlife Biologist® Application Form Instructions: 1
CERTIFIED WILDLIFE BIOLOGIST® APPLICATION FORM INSTRUCTIONS: 1. Membership in TWS is required to apply for certification. 2. Application must be typed and submitted in English. 3. Applications must be filled out using Adobe Reader software. 4. Supplemental information may be submitted along with a completed application form, if needed. 5. Applicant is responsibile for providing full documentation of educational and professional- level experience as a wildlife biologist. 6. Completed transcripts with evidence of conferral of degrees are required. No application can be processed until a complete application and all supporting materials have been received. 7. Submit completed application to [email protected] 8. Applicants should expect a decision to be made within 4-6 months. TABLE OF CONTENTS General Information.................................................................1 Education..................................................................................2 Completed Courses..................................................................3 Wildlife Management.....................................................4 Wildlife Biology..............................................................6 Ecology...........................................................................8 Zoology.........................................................................10 Botany...........................................................................13 Physical Sciences..........................................................16 Basic -
Internationalizing the University Curricula Through Communication
DOCUMENT RESUME ED 428 409 CS 510 027 AUTHOR Oseguera, A. Anthony Lopez TITLE Internationalizing the University Curricula through Communication: A Comparative Analysis among Nation States as Matrix for the Promulgation of Internationalism, through the Theoretical Influence of Communication Rhetors and International Educators, Viewed within the Arena of Political-Economy. PUB DATE 1998-12-00 NOTE 55p.; Paper presented at the Annual Meeting of the Speech Communication Association of Puerto Rico (18th, San Juan, Puerto Rico, December 4-5, 1998). PUB TYPE Reports Research (143) Speeches/Meeting Papers (150) EDRS PRICE MF01/PC03 Plus Postage. DESCRIPTORS *College Curriculum; *Communication (Thought Transfer); Comparative Analysis; *Educational Change; Educational Research; Foreign Countries; Global Approach; Higher Education; *International Education IDENTIFIERS *Internationalism ABSTRACT This paper surveys the current situation of internationalism among the various nation states by a comparative analysis, as matrix, to promulgate the internationalizing process, as a worthwhile goal, within and without the college and university curricula; the theoretical influence and contributions of scholars in communication, international education, and political-economy, moreover, become allies toward this endeavor. The paper calls for the promulgation of a new and more effective educational paradigm; in this respect, helping the movement toward the creation of new and better schools for the next millennium. The paper profiles "poorer nations" and "richer nations" and then views the United States, with its enormous wealth, leading technology, vast educational infrastructure, and its respect for democratic principles, as an agent with agencies that can effect positive consequences to ameliorating the status quo. The paper presents two hypotheses: the malaise of the current educational paradigm is real, and the "abertura" (opening) toward a better paradigmatic, educational pathway is advisable and feasible. -
Application Scientist (M/F/D) Biophysical Methods
CAREERS JOIN OUR TEAM Application Scientist (m/f/d) Biophysical Methods Munich, Germany We are a growing provider of scientific instruments for the analysis of molecular interactions and are seeking highly motivated individuals to join our team as Application Scientists for our innovative heliX® biosensors. We welcome applications from high-potentials who want to use their innovative minds to realize novel biophysical assays and to push the limits of what is possible in biosensing. If you like: • applied science and collaborating with scientists, technical sales, software developers and engineers • advanced scientific instruments for high-end research challenges in academia and industry • conformational changes, molecular interactions and investigating binding kinetics, affinities, enzymatic activity, and thermodynamics of biomolecules • advancing a pioneering biosensing technology (switchSENSE®), developing new biophysical assays to fight cancer and other diseases, and being embedded at the forefront of next-generation drug development • being a technical expert who enjoys providing advice, training, and hands-on support • traveling and an international work environment And if you have: • a friendly personality with great team spirit • training in biophysics, physics, biochemistry, chemistry, molecular biology, biotechnology, or similar (MSc, or PhD level) • a positive, hands-on attitude combined with a relentless will to get things to work • excellent communication and presentation skills • the ability to manage several projects simultaneously -
The Effect of Using the History of Science in Science Lessons On
THE EFFECT OF USING THE HISTORY OF SCIENCE IN SCIENCE LESSONS ON MEANINGFUL LEARNING DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Hayati Seker, MSc ***** The Ohio State University 2004 Dissertation Committee: Approved by Professor Arthur L. White, Adviser Professor Donna F. Berlin Adviser Professor Gordon Aubrecht College of Education Graduate Program ABSTRACT Incorporating the history of science into the instructional process has been proposed by national endeavors in science education because of the advantages for understanding scientific inquiry, the nature of scientific knowledge, interaction between science and society, and humanizing scientific knowledge. Because studies of the effectiveness of history of science in promoting student understanding report mixed results for student learning of science and interest in science, only its effect on understanding aspects of the nature of science has been emphasized by science educators. This dissertation presents a four-month study which investigated the effectiveness of curriculum materials incorporating the history of science on learning science, understanding the nature of science, and students’ interest in science. With regards to these objectives, three different class contexts were developed three main types of historical information: history of scientific concepts, the nature of science, and stories from scientists’ personal lives. In the first class context, which is termed the “Meaningful Class”, the similarities between students’ alternative ideas and scientific concepts from the history of science were considered in developing teaching materials. In the second ii context, which is termed the “Nature of Science (NOS) Class”, the teacher developed discussion sessions on the ways scientists produce scientific knowledge. -
The Meaning of Systems Biology
Cell, Vol. 121, 503–504, May 20, 2005, Copyright ©2005 by Elsevier Inc. DOI 10.1016/j.cell.2005.05.005 The Meaning of Systems Biology Commentary Marc W. Kirschner* glimpse of many more genes than we ever had before Department of Systems Biology to study. We are like naturalists discovering a new con- Harvard Medical School tinent, enthralled with the diversity itself. But we have Boston, Massachusetts 02115 also at the same time glimpsed the finiteness of this list of genes, a disturbingly small list. We have seen that the diversity of genes cannot approximate the diversity With the new excitement about systems biology, there of functions within an organism. In response, we have is understandable interest in a definition. This has argued that combinatorial use of small numbers of proven somewhat difficult. Scientific fields, like spe- components can generate all the diversity that is cies, arise by descent with modification, so in their ear- needed. This has had its recent incarnation in the sim- liest forms even the founders of great dynasties are plistic view that the rules of cis-regulatory control on only marginally different than their sister fields and spe- DNA can directly lead to an understanding of organ- cies. It is only in retrospect that we can recognize the isms and their evolution. Yet this assumes that the gene significant founding events. Before embarking on a def- products can be linked together in arbitrary combina- inition of systems biology, it may be worth remember- tions, something that is not assured in chemistry. It also ing that confusion and controversy surrounded the in- downplays the significant regulatory features that in- troduction of the term “molecular biology,” with claims volve interactions between gene products, their local- that it hardly differed from biochemistry.