PUTTING AUSTRALIAN FUNGI on the MAP Inside This Edition: NEWS
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
BGBM Annual Report 2017–2019
NETWORKING FOR DIVERSITY Annual Report 2017 – 2019 2017 – BGBM BGBM Annual Report 2017 – 2019 Cover image: Research into global biodiversity and its significance for humanity is impossible without networks. The topic of networking can be understood in different ways: in the natural world, with the life processes within an organism – visible in the network of the veins of a leaf or in the genetic diversity in populations of plants – networking takes place by means of pollen, via pollinators or the wind. In the world of research, individual objects, such as a particular plant, are networked with the data obtained from them. Networking is also crucial if this data is to be effective as a knowledge base for solving global issues of the future: collaboration between scientific experts within and across disciplines and with stakeholders at regional, national and international level. Contents Foreword 5 Organisation 56 A network for plants 6 Facts and figures 57 Staff, visiting scientists, doctoral students 57 Key events of 2017 – 2019 10 Affiliated and unsalaried scientists, volunteers 58 BGBM publications 59 When diversity goes online 16 Species newly described by BGBM authors 78 Families and genera newly described by BGBM authors 82 On the quest for diversity 20 Online resources and databases 83 Externally funded projects 87 Invisible diversity 24 Hosted scientific events 2017 – 2019 92 Collections 93 Humboldt 2.0 30 Library 96 BGBM Press: publications 97 Between East and West 36 Botanical Museum 99 Press and public relations 101 At the service of science 40 Visitor numbers 102 Budget 103 A research museum 44 Publication information 104 Hands-on science 50 Our symbol, the corncockle 52 4 5 Foreword BGBM Annual Report 2017 – 2019 We are facing vital challenges. -
Biological Diversity
From the Editors’ Desk….. Biodiversity, which is defined as the variety and variability among living organisms and the ecological complexes in which they occur, is measured at three levels – the gene, the species, and the ecosystem. Forest is a key element of our terrestrial ecological systems. They comprise tree- dominated vegetative associations with an innate complexity, inherent diversity, and serve as a renewable resource base as well as habitat for a myriad of life forms. Forests render numerous goods and services, and maintain life-support systems so essential for life on earth. India in its geographical area includes 1.8% of forest area according to the Forest Survey of India (2000). The forests cover an actual area of 63.73 million ha (19.39%) and consist of 37.74 million ha of dense forests, 25.51 million ha of open forest and 0.487 million ha of mangroves, apart from 5.19 million ha of scrub and comprises 16 major forest groups (MoEF, 2002). India has a rich and varied heritage of biodiversity covering ten biogeographical zones, the trans-Himalayan, the Himalayan, the Indian desert, the semi-arid zone(s), the Western Ghats, the Deccan Peninsula, the Gangetic Plain, North-East India, and the islands and coasts (Rodgers; Panwar and Mathur, 2000). India is rich at all levels of biodiversity and is one of the 12 megadiversity countries in the world. India’s wide range of climatic and topographical features has resulted in a high level of ecosystem diversity encompassing forests, wetlands, grasslands, deserts, coastal and marine ecosystems, each with a unique assemblage of species (MoEF, 2002). -
Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
The Contribution of DNA Metabarcoding
The Contribution of DNA Metabarcoding to Fungal Conservation: Diversity Assessment, Habitat Partitioning and Mapping Red-Listed Fungi in Protected Coastal Salix repens Communities in the Netherlands Jo´ zsef Geml1,2*, Barbara Gravendeel1,2,3, Kristiaan J. van der Gaag4, Manon Neilen1, Youri Lammers1, Niels Raes1, Tatiana A. Semenova1,2, Peter de Knijff4, Machiel E. Noordeloos1 1 Naturalis Biodiversity Center, Leiden, The Netherlands, 2 Faculty of Science, Leiden University, Leiden, The Netherlands, 3 University of Applied Sciences Leiden, Leiden, The Netherlands, 4 Forensic Laboratory for DNA Research, Human Genetics, Leiden University Medical Centre, Leiden, The Netherlands Abstract Western European coastal sand dunes are highly important for nature conservation. Communities of the creeping willow (Salix repens) represent one of the most characteristic and diverse vegetation types in the dunes. We report here the results of the first kingdom-wide fungal diversity assessment in S. repens coastal dune vegetation. We carried out massively parallel pyrosequencing of ITS rDNA from soil samples taken at ten sites in an extended area of joined nature reserves located along the North Sea coast of the Netherlands, representing habitats with varying soil pH and moisture levels. Fungal communities in Salix repens beds are highly diverse and we detected 1211 non-singleton fungal 97% sequence similarity OTUs after analyzing 688,434 ITS2 rDNA sequences. Our comparison along a north-south transect indicated strong correlation between soil pH and fungal community composition. The total fungal richness and the number OTUs of most fungal taxonomic groups negatively correlated with higher soil pH, with some exceptions. With regard to ecological groups, dark-septate endophytic fungi were more diverse in acidic soils, ectomycorrhizal fungi were represented by more OTUs in calcareous sites, while detected arbuscular mycorrhizal genera fungi showed opposing trends regarding pH. -
Fungi of North East Victoria Online
Agarics Agarics Agarics Agarics Fungi of North East Victoria An Identication and Conservation Guide North East Victoria encompasses an area of almost 20,000 km2, bounded by the Murray River to the north and east, the Great Dividing Range to the south and Fungi the Warby Ranges to the west. From box ironbark woodlands and heathy dry forests, open plains and wetlands, alpine herb elds, montane grasslands and of North East Victoria tall ash forests, to your local park or backyard, fungi are found throughout the region. Every fungus species contributes to the functioning, health and An Identification and Conservation Guide resilience of these ecosystems. Identifying Fungi This guide represents 96 species from hundreds, possibly thousands that grow in the diverse habitats of North East Victoria. It includes some of the more conspicuous and distinctive species that can be recognised in the eld, using features visible to the Agaricus xanthodermus* Armillaria luteobubalina* Coprinellus disseminatus Cortinarius austroalbidus Cortinarius sublargus Galerina patagonica gp* Hypholoma fasciculare Lepista nuda* Mycena albidofusca Mycena nargan* Protostropharia semiglobata Russula clelandii gp. yellow stainer Australian honey fungus fairy bonnet Australian white webcap funeral bell sulphur tuft blewit* white-crowned mycena Nargan’s bonnet dung roundhead naked eye or with a x10 magnier. LAMELLAE M LAMELLAE M ■ LAMELLAE S ■ LAMELLAE S, P ■ LAMELLAE S ■ LAMELLAE M ■ ■ LAMELLAE S ■ LAMELLAE S ■ LAMELLAE S ■ LAMELLAE S ■ LAMELLAE S ■ LAMELLAE S ■ When identifying a fungus, try and nd specimens of the same species at dierent growth stages, so you can observe the developmental changes that can occur. Also note the variation in colour and shape that can result from exposure to varying weather conditions. -
Septal Pore Caps in Basidiomycetes Composition and Ultrastructure
Septal Pore Caps in Basidiomycetes Composition and Ultrastructure Septal Pore Caps in Basidiomycetes Composition and Ultrastructure Septumporie-kappen in Basidiomyceten Samenstelling en Ultrastructuur (met een samenvatting in het Nederlands) Proefschrift ter verkrijging van de graad van doctor aan de Universiteit Utrecht op gezag van de rector magnificus, prof.dr. J.C. Stoof, ingevolge het besluit van het college voor promoties in het openbaar te verdedigen op maandag 17 december 2007 des middags te 16.15 uur door Kenneth Gregory Anthony van Driel geboren op 31 oktober 1975 te Terneuzen Promotoren: Prof. dr. A.J. Verkleij Prof. dr. H.A.B. Wösten Co-promotoren: Dr. T. Boekhout Dr. W.H. Müller voor mijn ouders Cover design by Danny Nooren. Scanning electron micrographs of septal pore caps of Rhizoctonia solani made by Wally Müller. Printed at Ponsen & Looijen b.v., Wageningen, The Netherlands. ISBN 978-90-6464-191-6 CONTENTS Chapter 1 General Introduction 9 Chapter 2 Septal Pore Complex Morphology in the Agaricomycotina 27 (Basidiomycota) with Emphasis on the Cantharellales and Hymenochaetales Chapter 3 Laser Microdissection of Fungal Septa as Visualized by 63 Scanning Electron Microscopy Chapter 4 Enrichment of Perforate Septal Pore Caps from the 79 Basidiomycetous Fungus Rhizoctonia solani by Combined Use of French Press, Isopycnic Centrifugation, and Triton X-100 Chapter 5 SPC18, a Novel Septal Pore Cap Protein of Rhizoctonia 95 solani Residing in Septal Pore Caps and Pore-plugs Chapter 6 Summary and General Discussion 113 Samenvatting 123 Nawoord 129 List of Publications 131 Curriculum vitae 133 Chapter 1 General Introduction Kenneth G.A. van Driel*, Arend F. -
Behaviour in Cultures and Habitat Requirements of Species Within the Genera Loreleia and Rickenella (Agaricales)
ACTA MYCOLOGICA Dedicated to Professor Alina Skirgiełło Vol. 41 (2): 189-208 on the occasion of her ninety-fifth birthday 2006 Behaviour in cultures and habitat requirements of species within the genera Loreleia and Rickenella (Agaricales) ANDREAS BRESINSKY and ANGELIKA SCHÖTZ Institute of Botany, Regensburg University D-93040 Regensburg, [email protected] Bresinsky A., Schötz A.: Behaviour in cultures and habitat requirements of species within the genera Loreleia and Rickenella (Agaricales). Acta Mycol. 41 (2): 189-208, 2006. The term eco-geogram is introduced for surveying (in logical order) ecological and geographical data connected with fungal species. The database PILZOEK was established for that purpose. Eco-geograms are provided in this paper as an example for data retrieval from PILZOEK concerning the agarics Loreleia marchantiae, L. postii, Rickenella swartzii and R. fibula. The potential degree of endangerment is discussed in regard to habitat requirements. European species of Loreleia are not regarded to be endangered in Central Europe, although the risk to get threatened, because of low frequency of fruit body occurrence and quite a narrow substrate specialization, could be higher than in case of Rickenella fibula and R. swartzii. Cultures of Rickenella fibula, R. swartzii, Loreleia marchantiae (= Gerronema daamsii) and L. postii were investigated in regard to pigment accumulation, chlamydospore formation and some other characters. Key words: eco-geogram, Rickenella, Loreleia, habitats, substrates, cultures, endangerment INTRODUCTION The genera Loreleia and Rickenella emerged taxonomically from the genus Ger- ronema in its broader sense, as it was originally interpreted by Singer 1986. Various contributions to the generic concept brought evidence to the assumption that Ger- ronema in the sense of Singer (1986) represents an artificial assemblage of species. -
Composition and Specialization of the Lichen Functional Traits in a Primeval Forest—Does Ecosystem Organization Level Matter?
Article Composition and Specialization of the Lichen Functional Traits in a Primeval Forest—Does Ecosystem Organization Level Matter? Anna Łubek 1,*, Martin Kukwa 2 , Bogdan Jaroszewicz 3 and Patryk Czortek 3 1 Division of Environmental Biology, Institute of Biology, The Jan Kochanowski University in Kielce, Uniwersytecka 7, PL-25-406 Kielce, Poland 2 Department of Plant Taxonomy and Nature Conservation, Faculty of Biology, University of Gda´nsk, Wita Stwosza 59, PL-80-308 Gda´nsk,Poland; [email protected] 3 Białowieza˙ Geobotanical Station, Faculty of Biology, University of Warsaw, Sportowa 19, PL-17-230 Białowieza,˙ Poland; [email protected] (B.J.); [email protected] (P.C.) * Correspondence: [email protected] Abstract: Current trends emphasize the importance of the examination of the functional composition of lichens, which may provide information on the species realized niche diversity and community assembly processes, thus enabling one to understand the specific adaptations of lichens and their interaction with the environment. We analyzed the distribution and specialization of diverse mor- phological, anatomical and chemical (lichen secondary metabolites) traits in lichen communities in a close-to-natural forest of lowland Europe. We considered these traits in relation to three levels of forest ecosystem organization: forest communities, phorophyte species and substrates, in order to recognize the specialization of functional traits to different levels of the forest complexity. Traits related to the sexual reproduction of mycobionts (i.e., ascomata types: lecanoroid apothecia, lecideoid Citation: Łubek, A.; Kukwa, M.; apothecia, arthonioid apothecia, lirellate apothecia, stalked apothecia and perithecia) and asexual Jaroszewicz, B.; Czortek, P. -
Are the TTAGG and TTAGGG Telomeric Repeats Phylogenetically Conserved in Aculeate Hymenoptera?
Sci Nat (2017) 104: 85 DOI 10.1007/s00114-017-1507-z ORIGINAL PAPER Are the TTAGG and TTAGGG telomeric repeats phylogenetically conserved in aculeate Hymenoptera? Rodolpho S. T. Menezes1 & Vanessa B. Bardella 2 & Diogo C. Cabral-de-Mello2 & Daercio A. A. Lucena1 & Eduardo A. B. Almeida1 Received: 24 July 2017 /Revised: 18 September 2017 /Accepted: 20 September 2017 /Published online: 27 September 2017 # Springer-Verlag GmbH Germany 2017 Abstract Despite the (TTAGG)n telomeric repeat supposed Keywords Apocrita . Chromosomes . Evolution . Insects . being the ancestral DNA motif of telomeres in insects, it was Telomere . TTAGG repeatedly lost within some insect orders. Notably, parasitoid hymenopterans and the social wasp Metapolybia decorata (Gribodo) lack the (TTAGG)n sequence, but in other represen- Introduction tatives of Hymenoptera, this motif was noticed, such as dif- ferent ant species and the honeybee. These findings raise the A telomere is an essential nucleoprotein composed of a short question of whether the insect telomeric repeat is or not phy- and tandemly arrayed motif present at each end of eukaryotic logenetically predominant in Hymenoptera. Thus, we evalu- chromosomes (Blackburn 1991). It prevents chromosome ends ated the occurrence of both the (TTAGG)n sequence and the from degrading and avoids chromosomal rearrangements, such vertebrate telomere sequence (TTAGGG)n using dot-blotting as end-to-end fusions by distinguishing natural chromosome hybridization in 25 aculeate species of Hymenoptera. Our ends from chromosomal breaks. Telomeres also compensate results revealed the absence of (TTAGG)n sequence in all for chromosome shortening resulting from incomplete DNA tested species, elevating the number of hymenopteran families replication at chromosome ends (Blackburn 1991; Greider lacking this telomeric sequence to 13 out of the 15 tested and Blackburn 1996). -
Botanist Interior 43.1
192 THE MICHIGAN BOTANIST Vol. 44 THE BASIDIOLICHEN MULTICLAVULA MUCIDA (FR.) PETERSEN: NEW TO MICHIGAN Matthew P. Nelsen* Department of Botany University of Wisconsin-Madison Madison, WI 53706 While most lichen-forming fungi belong to the Ascomycota, a small number are known among the Basidiomycota (Oberwinkler 2001). Of the three basid- iomycete lichen genera known in North America (Esslinger 1997) only Multi- clavula and Lichenomphalia (Omphalina) occur in temperate to boreal regions (Brodo et al. 2001). These two genera produce ephemeral fruiting bodies, which make them difficult to detect when basidiocarps are not present. Multiclavula does not form a specialized, unique thallus as the result of lichenization; because of this, its classification as a lichen is arguable (Brodo et al. 2001). However, it is included as a lichen in the North American Lichen Checklist (Esslinger 1997) and is discussed as one here. While many Multiclavula species are tropical in na- ture, five are known from North America (Esslinger 1997; Brodo et al. 2001), and the first is reported for the state of Michigan. NEW RECORD FOR MICHIGAN Multiclavula mucida (Fr.) Petersen (Clavariaceae) MICHIGAN. Baraga County: Found on a rotting log in the King’s Lake Campground area, 17 Sep- tember 2005, Nelsen 3980 (MSC). This appears to be the most cosmopolitan of the Multiclavula species (Petersen 1967) and is known from southern Ontario (Wong & Brodo 1992), Wisconsin (Wetmore & Bennett 2002; Thom- son 2003; Lay 2004), and throughout eastern North America (Brodo et al. 2001). It typically occurs on an algal mat (thought to be Coccomyxa) on shaded, rotten logs and has yellowish to orange ba- sidiocarps (Petersen 1967; Brodo et al. -
Picture As Pdf Download
RESEARCH Causes of ant sting anaphylaxis in Australia: the Australian Ant Venom Allergy Study Simon G A Brown, Pauline van Eeden, Michael D Wiese, Raymond J Mullins, Graham O Solley, Robert Puy, Robert W Taylor and Robert J Heddle he prevalence of systemic allergy to ABSTRACT native ant stings in Australia is as high as 3% in areas where these Objective: To determine the Australian native ant species associated with ant sting T anaphylaxis, geographical distribution of allergic reactions, and feasibility of diagnostic insects are commonly encountered, such as Tasmania and regional Victoria.1,2 In one venom-specific IgE (sIgE) testing. large Tasmanian emergency department Design, setting and participants: Descriptive clinical, entomological and study, ant sting allergy was the most com- immunological study of Australians with a history of ant sting anaphylaxis, recruited in mon cause of anaphylaxis (30%), exceeding 2006–2007 through media exposure and referrals from allergy practices and emergency cases attributed to bees, wasps, antibiotics physicians nationwide. We interviewed participants, collected entomological or food.3 specimens, prepared reference venom extracts, and conducted serum sIgE testing Myrmecia pilosula (jack jumper ant [JJA]) against ant venom panels relevant to the species found in each geographical region. is theThe major Medical cause Journal of ant ofsting Australia anaphylaxis ISSN: Main outcome measures: Reaction causation attributed using a combination of ant 2 in Tasmania.0025-729X A 18double-blind, July 2011 195 randomised 2 69-73 identification and sIgE testing. placebo-controlled©The Medical Journaltrial has of Australiademonstrated 2011 Results: 376 participants reported 735 systemic reactions. Of 299 participants for whom the effectivenesswww.mja.com.au of JJA venom immuno- a cause was determined, 265 (89%; 95% CI, 84%–92%) had reacted clinically to Myrmecia therapyResearch (VIT) to reduce the risk of sting species and 34 (11%; 95% CI, 8%–16%) to green-head ant (Rhytidoponera metallica). -
Biodiversity Summary for NRM Regions Species List
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations.