Natural Substrata for Corticioid Fungi
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Response of Ectomycorrhizal Fungi to Inorganic and Organic Forms of Nitrogen and Phosphorus
Michigan Technological University Digital Commons @ Michigan Tech Dissertations, Master's Theses and Master's Dissertations, Master's Theses and Master's Reports - Open Reports 2012 RESPONSE OF ECTOMYCORRHIZAL FUNGI TO INORGANIC AND ORGANIC FORMS OF NITROGEN AND PHOSPHORUS Christa M. Luokkala Michigan Technological University Follow this and additional works at: https://digitalcommons.mtu.edu/etds Part of the Forest Sciences Commons Copyright 2012 Christa M. Luokkala Recommended Citation Luokkala, Christa M., "RESPONSE OF ECTOMYCORRHIZAL FUNGI TO INORGANIC AND ORGANIC FORMS OF NITROGEN AND PHOSPHORUS", Master's report, Michigan Technological University, 2012. https://doi.org/10.37099/mtu.dc.etds/611 Follow this and additional works at: https://digitalcommons.mtu.edu/etds Part of the Forest Sciences Commons RESPONSE OF ECTOMYCORRHIZAL FUNGI TO INORGANIC AND ORGANIC FORMS OF NITROGEN AND PHOSPHORUS By Christa M. Luokkala A REPORT Submitted in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE In Applied Ecology MICHIGAN TECHNOLOGICAL UNIVERSITY 2012 © 2012 Christa M. Luokkala This report has been approved in partial fulfillment of the requirements for the Degree of MASTER OF SCIENCE in Applied Ecology. School of Forest Resources and Environmental Science Report Advisor: Dr. Erik A. Lilleskov Committee Member: Dr. Susan A. Bagley Committee Member: Dr. Dana L. Richter Committee Member: Dr. Christopher W. Swanston School Dean: Dr. Terry L. Sharik Table of Contents Abstract ............................................................................................................................. -
The Lichens' Microbiota, Still a Mystery?
fmicb-12-623839 March 24, 2021 Time: 15:25 # 1 REVIEW published: 30 March 2021 doi: 10.3389/fmicb.2021.623839 The Lichens’ Microbiota, Still a Mystery? Maria Grimm1*, Martin Grube2, Ulf Schiefelbein3, Daniela Zühlke1, Jörg Bernhardt1 and Katharina Riedel1 1 Institute of Microbiology, University Greifswald, Greifswald, Germany, 2 Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria, 3 Botanical Garden, University of Rostock, Rostock, Germany Lichens represent self-supporting symbioses, which occur in a wide range of terrestrial habitats and which contribute significantly to mineral cycling and energy flow at a global scale. Lichens usually grow much slower than higher plants. Nevertheless, lichens can contribute substantially to biomass production. This review focuses on the lichen symbiosis in general and especially on the model species Lobaria pulmonaria L. Hoffm., which is a large foliose lichen that occurs worldwide on tree trunks in undisturbed forests with long ecological continuity. In comparison to many other lichens, L. pulmonaria is less tolerant to desiccation and highly sensitive to air pollution. The name- giving mycobiont (belonging to the Ascomycota), provides a protective layer covering a layer of the green-algal photobiont (Dictyochloropsis reticulata) and interspersed cyanobacterial cell clusters (Nostoc spec.). Recently performed metaproteome analyses Edited by: confirm the partition of functions in lichen partnerships. The ample functional diversity Nathalie Connil, Université de Rouen, France of the mycobiont contrasts the predominant function of the photobiont in production Reviewed by: (and secretion) of energy-rich carbohydrates, and the cyanobiont’s contribution by Dirk Benndorf, nitrogen fixation. In addition, high throughput and state-of-the-art metagenomics and Otto von Guericke University community fingerprinting, metatranscriptomics, and MS-based metaproteomics identify Magdeburg, Germany Guilherme Lanzi Sassaki, the bacterial community present on L. -
Wahlenbergia 1 Distribution
Wahlenbergia 1 Distribution: University of Umeå, Department of Ecological Botany, S-901 87 UMEÂ, SWEDEN Åke Strid Wood-inhabiting Fungi of Alder Forests in North-Central Scandinavia. I. Aphyllophorales (Basidiomycetes). Taxonomy, Ecology and Distri bution. Akademisk avhandling som med tillstånd av rektorsämbetet vid Umeå universitet för avläggande av filosofie doktorsexamen framlägges till offentlig granskning vid Avdelningen för ekologisk botanik, Botanik, Fysiologi, Hufo, sem.-rum B, tisdagen den 27 maj 1975, kl. 10. Abstract Wood-inhabiting fungi were collected on different trees in 99 loca-' lities of alder woods, dominated by Alnus incana or occasionally A. glutinosa, in N-C Sweden and C Norway. Most of the localities are situated near the east coast of Sweden where the prevailing land elevation creates conditions suitable for colonization by alder. The remaining localities are mainly found in the inland parts of Sweden and Norway, along streams, in ravines etc. The investigated localities are briefly described as to their general vegetation, and a regional survey of the alder forests is given. The number of collections of Aphyllophorales amounts to approxi mately 5,000, comprising 286 species. The following new combinations are proposed: Hypoohnicium polonense (Bres.) Strid, H. pruinosum (Bres.) Strid, Phlebia lindtneri (Pil.) Parm. and Sistotrema hete- roncmum (John Erikss.) Strid. Seven species are collected as new to Scandinavia, viz., Botryobasidium aure urn3 Ceratobasidium stridiit Hyphoderma orphanellum, Hyphodontiella multiseptata, Hypoohnicium pruinosum> Phlebia lindtneri and Tubuliorinis effugiens, and approxi mately 85 additional species are reported for the first time from the investigation area. Six specimens of Cortioiaoeae have remained undetermined but are included in the species list. -
Genus from Chamba District in Himachal Pradesh Peniophora
64 KAVAKA54: 64-73 (2020) .doi:10.36460/Kavaka/54/2020/64-73 GenusPeniophora from Chamba District in Himachal Pradesh Poonam1 ,Avneet Pal Singh 2* and Gurpaul Singh Dhingra 2 1Government Post Graduate College, Chamba 176 314, Himachal Pradesh, India 2 Department of Botany, Punjabi University, Patiala 147 002, Punjab, India *Corresponding author Email: [email protected] (Submitted on March 12, 2020;Accepted on May 10, 2020) ABSTRACT ThecorticioidgenusPeniophora Cooke( Agaricomycetes, Russulales, Peniophoraceae )isdescribedfromChambadistrict(HimachalPradesh) basedontenspecies.Peniophora lycii (Pers.)Höhn.&Litsch.and P. rufomarginata (Pers.)Bourdot&Galzinaredescribedasnewrecordsfor IndiaandP. incarnata (Pers.)Cookeand P.violaceolivida (Sommerf.)MasseeasnewforHimachalPradesh.Inadditiontothesenewrecords, P. limitata(Chaillet ex Fr.) Cooke and P. ovalispora Boidin, Lanq. & Gilles are recorded as new to Chamba district.Akey to the species of Peniophora from Chamba district is also presented. Keywords: Basidiomycota,Agaricomycetes, Western Himalaya, wood rotting fungi. INTRODUCTION Key to the species: The genusPeniophora Cooke ( Russulales, Peniophoraceae ) 1. Dendrohyphidia present ......................................P.lycii is characteristic in having resupinate basidiocarps that are 1. Dendrohyphidia absent............................................... 2 adnate, orbicular to confluent to effused with occasionally reflexed margins. The hymenophore is mostly smooth to 2. Basidiospores broadly ellipsoid to subglobose ........... tuberculate -
Annotated Check List and Host Index Arizona Wood
Annotated Check List and Host Index for Arizona Wood-Rotting Fungi Item Type text; Book Authors Gilbertson, R. L.; Martin, K. J.; Lindsey, J. P. Publisher College of Agriculture, University of Arizona (Tucson, AZ) Rights Copyright © Arizona Board of Regents. The University of Arizona. Download date 28/09/2021 02:18:59 Link to Item http://hdl.handle.net/10150/602154 Annotated Check List and Host Index for Arizona Wood - Rotting Fungi Technical Bulletin 209 Agricultural Experiment Station The University of Arizona Tucson AÏfJ\fOTA TED CHECK LI5T aid HOST INDEX ford ARIZONA WOOD- ROTTlNg FUNGI /. L. GILßERTSON K.T IyIARTiN Z J. P, LINDSEY3 PRDFE550I of PLANT PATHOLOgY 2GRADUATE ASSISTANT in I?ESEARCI-4 36FZADAATE A5 S /STANT'" TEACHING Z z l'9 FR5 1974- INTRODUCTION flora similar to that of the Gulf Coast and the southeastern United States is found. Here the major tree species include hardwoods such as Arizona is characterized by a wide variety of Arizona sycamore, Arizona black walnut, oaks, ecological zones from Sonoran Desert to alpine velvet ash, Fremont cottonwood, willows, and tundra. This environmental diversity has resulted mesquite. Some conifers, including Chihuahua pine, in a rich flora of woody plants in the state. De- Apache pine, pinyons, junipers, and Arizona cypress tailed accounts of the vegetation of Arizona have also occur in association with these hardwoods. appeared in a number of publications, including Arizona fungi typical of the southeastern flora those of Benson and Darrow (1954), Nichol (1952), include Fomitopsis ulmaria, Donkia pulcherrima, Kearney and Peebles (1969), Shreve and Wiggins Tyromyces palustris, Lopharia crassa, Inonotus (1964), Lowe (1972), and Hastings et al. -
Fertility-Dependent Effects of Ectomycorrhizal Fungal Communities on White Spruce Seedling Nutrition
Mycorrhiza (2015) 25:649–662 DOI 10.1007/s00572-015-0640-9 ORIGINAL PAPER Fertility-dependent effects of ectomycorrhizal fungal communities on white spruce seedling nutrition Alistair J. H. Smith II1 & Lynette R. Potvin2 & Erik A. Lilleskov2 Received: 14 January 2015 /Accepted: 6 April 2015 /Published online: 24 April 2015 # Springer-Verlag Berlin Heidelberg (outside the USA) 2015 Abstract Ectomycorrhizal fungi (EcMF) typically colonize manganese, and Atheliaceae sp. had a negative relationship with nursery seedlings, but nutritional and growth effects of these P content. Findings shed light on the community and species communities are only partly understood. To examine these ef- effects on seedling condition, revealing clear functional differ- fects, Picea glauca seedlings collected from a tree nursery natu- ences among dominants. The approach used should be scalable rally colonized by three dominant EcMF were divided between to explore function in more complex communities composed of fertilized and unfertilized treatments. After one growing season unculturable EcMF. seedlings were harvested, ectomycorrhizas identified using DNA sequencing, and seedlings analyzed for leaf nutrient concentra- Keywords Stoichiometry . Ectomycorrhizal fungal tion and content, and biomass parameters. EcMF community community effects . Nitrogen . Phosphorus . Micronutrients . structure–nutrient interactions were tested using nonmetric mul- Amphinema . Atheliaceae . Thelephora terrestris . tidimensional scaling (NMDS) combined with vector analysis of Greenhouse foliar nutrients and biomass. We identified three dominant spe- cies: Amphinema sp., Atheliaceae sp., and Thelephora terrestris. NMDS+envfit revealed significant community effects on seed- Introduction ling nutrition that differed with fertilization treatment. PERM ANOVA and regression analyses uncovered significant species Seedlings regenerating naturally or artificially are influenced by effects on host nutrient concentration, content, and stoichiometry. -
Aphyllophoraceous Wood-Inhabiting Fungi on Quercus Spp. in Italy
Posted June, 2008. Summary published in Mycotaxon 104: 425–428. 2008. Aphyllophoraceous wood-inhabiting fungi on Quercus spp. in Italy 1 1 ANNAROSA BERNICCHIA , ALESSANDRO BENNI ,GIUSEPPE 2 2 2 VENTURELLA , MARIA LETIZIA GARGANO , ALESSANDRO SAITTA & 3 SERGIO PÉREZ GORJÓN [email protected] [email protected] [email protected] [email protected] [email protected] [email protected] 1Dipartimento di Scienze e Tecnologie Agroambientali, Patologia Vegetale Università degli Studi di Bologna, Via Fanin 42, 40127 Bologna Italy 2Dipartimento di Scienze Botaniche, Università di Palermo, Via Archirafi 38, 90123 Palermo Italy 3Departamento de Botánica & Centro Hispano-Luso de Investigaciones Agrarias Universidad de Salamanca, Ldo. Méndez Nieto s/n, 37007 Salamanca Spain Abstract─240 species representing 100 genera of aphyllophoraceous fungi growing on Quercus spp. in Italy are listed. Some species are considered rare or infrequent in Italy, e.g. Bulbillomyces farinosus, Dendrothele dryina, Fomitopsis iberica, F. spraguei, Hyphoderma incrustatum, Inonotus andersonii. Key words─lignicolous fungi, diversity, oak woods Introduction In line with previous reports on Italian lignicolous fungi (Bernicchia 2000, Mayrhofer et al. 2001, Pérez Gorjón et al. 2006, Bernicchia et al. 2007a, b, c), a list of aphyllophoraceous fungi growing on Quercus spp. is announced. Oak forests are widely distributed in Europe, and 20 taxa of the genus Quercus L. occur in the European sector of Mediterranean region (Webb 1993). In Italy, the following species are widely distributed: Q. cerris L., Q. ilex L., Q. pubescens Willd., Q. petraea (Matt.) Liebl., Q. robur L. subsp. robur and Q. suber L.; these were the most common substrates from which aphyllophoraceous fungi have been collected. -
Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
How Many Fungi Make Sclerotia?
fungal ecology xxx (2014) 1e10 available at www.sciencedirect.com ScienceDirect journal homepage: www.elsevier.com/locate/funeco Short Communication How many fungi make sclerotia? Matthew E. SMITHa,*, Terry W. HENKELb, Jeffrey A. ROLLINSa aUniversity of Florida, Department of Plant Pathology, Gainesville, FL 32611-0680, USA bHumboldt State University of Florida, Department of Biological Sciences, Arcata, CA 95521, USA article info abstract Article history: Most fungi produce some type of durable microscopic structure such as a spore that is Received 25 April 2014 important for dispersal and/or survival under adverse conditions, but many species also Revision received 23 July 2014 produce dense aggregations of tissue called sclerotia. These structures help fungi to survive Accepted 28 July 2014 challenging conditions such as freezing, desiccation, microbial attack, or the absence of a Available online - host. During studies of hypogeous fungi we encountered morphologically distinct sclerotia Corresponding editor: in nature that were not linked with a known fungus. These observations suggested that Dr. Jean Lodge many unrelated fungi with diverse trophic modes may form sclerotia, but that these structures have been overlooked. To identify the phylogenetic affiliations and trophic Keywords: modes of sclerotium-forming fungi, we conducted a literature review and sequenced DNA Chemical defense from fresh sclerotium collections. We found that sclerotium-forming fungi are ecologically Ectomycorrhizal diverse and phylogenetically dispersed among 85 genera in 20 orders of Dikarya, suggesting Plant pathogens that the ability to form sclerotia probably evolved 14 different times in fungi. Saprotrophic ª 2014 Elsevier Ltd and The British Mycological Society. All rights reserved. Sclerotium Fungi are among the most diverse lineages of eukaryotes with features such as a hyphal thallus, non-flagellated cells, and an estimated 5.1 million species (Blackwell, 2011). -
Kaistella Soli Sp. Nov., Isolated from Oil-Contaminated Soil
A001 Kaistella soli sp. nov., Isolated from Oil-contaminated Soil Dhiraj Kumar Chaudhary1, Ram Hari Dahal2, Dong-Uk Kim3, and Yongseok Hong1* 1Department of Environmental Engineering, Korea University Sejong Campus, 2Department of Microbiology, School of Medicine, Kyungpook National University, 3Department of Biological Science, College of Science and Engineering, Sangji University A light yellow-colored, rod-shaped bacterial strain DKR-2T was isolated from oil-contaminated experimental soil. The strain was Gram-stain-negative, catalase and oxidase positive, and grew at temperature 10–35°C, at pH 6.0– 9.0, and at 0–1.5% (w/v) NaCl concentration. The phylogenetic analysis and 16S rRNA gene sequence analysis suggested that the strain DKR-2T was affiliated to the genus Kaistella, with the closest species being Kaistella haifensis H38T (97.6% sequence similarity). The chemotaxonomic profiles revealed the presence of phosphatidylethanolamine as the principal polar lipids;iso-C15:0, antiso-C15:0, and summed feature 9 (iso-C17:1 9c and/or C16:0 10-methyl) as the main fatty acids; and menaquinone-6 as a major menaquinone. The DNA G + C content was 39.5%. In addition, the average nucleotide identity (ANIu) and in silico DNA–DNA hybridization (dDDH) relatedness values between strain DKR-2T and phylogenically closest members were below the threshold values for species delineation. The polyphasic taxonomic features illustrated in this study clearly implied that strain DKR-2T represents a novel species in the genus Kaistella, for which the name Kaistella soli sp. nov. is proposed with the type strain DKR-2T (= KACC 22070T = NBRC 114725T). [This study was supported by Creative Challenge Research Foundation Support Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (NRF- 2020R1I1A1A01071920).] A002 Chitinibacter bivalviorum sp. -
Evolution of Complex Fruiting-Body Morphologies in Homobasidiomycetes
Received 18April 2002 Accepted 26 June 2002 Publishedonline 12September 2002 Evolutionof complexfruiting-bo dymorpholog ies inhomobasidi omycetes David S.Hibbett * and Manfred Binder BiologyDepartment, Clark University, 950Main Street,Worcester, MA 01610,USA The fruiting bodiesof homobasidiomycetes include some of the most complex formsthat have evolved in thefungi, such as gilled mushrooms,bracket fungi andpuffballs (‘pileate-erect’) forms.Homobasidio- mycetesalso includerelatively simple crust-like‘ resupinate’forms, however, which accountfor ca. 13– 15% ofthedescribed species in thegroup. Resupinatehomobasidiomycetes have beeninterpreted either asa paraphyletic grade ofplesiomorphic formsor apolyphyletic assemblage ofreducedforms. The former view suggeststhat morphological evolutionin homobasidiomyceteshas beenmarked byindependentelab- oration in many clades,whereas the latter view suggeststhat parallel simplication has beena common modeof evolution.To infer patternsof morphological evolution in homobasidiomycetes,we constructed phylogenetic treesfrom adatasetof 481 speciesand performed ancestral statereconstruction (ASR) using parsimony andmaximum likelihood (ML)methods. ASR with both parsimony andML implies that the ancestorof the homobasidiomycetes was resupinate, and that therehave beenmultiple gains andlosses ofcomplex formsin thehomobasidiomycetes. We also usedML toaddresswhether there is anasymmetry in therate oftransformations betweensimple andcomplex forms.Models of morphological evolution inferredwith MLindicate that therate -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella