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Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
Multiple Colonizations Lead to Cryptic Biodiversity in an Island Ecosystem: Comparative Phylogeography of Anchialine Shrimp Species in the Ryukyu Archipelago, Japan
Reference: Biol. Bull. 225: 24–41. (September 2013) © 2013 Marine Biological Laboratory Multiple Colonizations Lead to Cryptic Biodiversity in an Island Ecosystem: Comparative Phylogeography of Anchialine Shrimp Species in the Ryukyu Archipelago, Japan DAVID A. WEESE1,* YOSHIHISA FUJITA2,3, AND SCOTT R. SANTOS1,4 1Department of Biological Sciences and Molette Biology Laboratory for Environmental and Climate Change Studies, Auburn University, 101 Life Sciences Building, Auburn, Alabama 36849; 2University Education Center, University of the Ryukyus, 1 Senbaru, Nishihara-cho, Okinawa 903-0213, Japan; 3Marine Learning Center, 2-95-101 Miyagi, Chatan-cho, Okinawa 904-0113, Japan; 4Cell and Molecular Biosciences Peak Program, Auburn University, 101 Life Sciences Building, Auburn, Alabama 36849 Abstract. Archipelagos of the Indo-West Pacific are con- results, when interpreted in the context of Pacific oceano- sidered to be among the richest in the world in biodiversity, graphic currents and geologic history of the Ryukyus, imply and phylogeographic studies generally support either the multiple colonizations of the archipelago by the three spe- center of origin or the center of accumulation hypothesis to cies, consistent with the center of accumulation hypothesis. explain this pattern. To differentiate between these compet- While this study contributes toward understanding the bio- ing hypotheses for organisms from the Indo-West Pacific diversity, ecology, and evolution of organisms in the anchialine ecosystem, defined as coastal bodies of mixoha- Ryukyus and the Indo-West Pacific, it also has potential line water fluctuating with the tides but having no direct utility in establishing conservation strategies for anchialine oceanic connections, we investigated the genetic variation, fauna of the Pacific Basin in general. -
PROCEEDINGS of the WORKSHOP on TRADE and CONSERVATION of PANGOLINS NATIVE to SOUTH and SOUTHEAST ASIA 30 June – 2 July 2008, Singapore Zoo Edited by S
PROCEEDINGS OF THE WORKSHOP ON TRADE AND CONSERVATION OF PANGOLINS NATIVE TO SOUTH AND SOUTHEAST ASIA 30 June – 2 July 2008, Singapore Zoo Edited by S. Pantel and S.Y. Chin Wildlife Reserves Singapore Group PROCEEDINGS OF THE WORKSHOP ON TRADE AND CONSERVATION OF PANGOLINS NATIVE TO SOUTH AND SOUTHEAST ASIA 30 JUNE –2JULY 2008, SINGAPORE ZOO EDITED BY S. PANTEL AND S. Y. CHIN 1 Published by TRAFFIC Southeast Asia, Petaling Jaya, Selangor, Malaysia © 2009 TRAFFIC Southeast Asia All rights reserved. All material appearing in these proceedings is copyrighted and may be reproduced with permission. Any reproduction, in full or in part, of this publication must credit TRAFFIC Southeast Asia as the copyright owner. The views of the authors expressed in these proceedings do not necessarily reflect those of the TRAFFIC Network, WWF or IUCN. The designations of geographical entities in this publication, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of TRAFFIC or its supporting organizations concerning the legal status of any country, territory, or area, or its authorities, or concerning the delimitation of its frontiers or boundaries. The TRAFFIC symbol copyright and Registered Trademark ownership is held by WWF. TRAFFIC is a joint programme of WWF and IUCN. Layout by Sandrine Pantel, TRAFFIC Southeast Asia Suggested citation: Sandrine Pantel and Chin Sing Yun (ed.). 2009. Proceedings of the Workshop on Trade and Conservation of Pangolins Native to South and Southeast Asia, 30 June-2 July -
Pontoniine Shrimps Associated with Cnidarians: New Records and Hst of Species from Coastal Waters of Viet Nam
Arthropoda Selecta 13 (4): 199-218 ARTHROPODA SELECTA, 2004 Pontoniine shrimps associated with cnidarians: new records and Hst of species from coastal waters of Viet Nam KpeBeTKH-nOHTOHHHHbl aCCOIJHHpOBaHHbie C KHIUeHHOnOAOCTHblMH: HOBbie HaXOAKH H CnHCOK BHAOB H3 npH6pe>KHbIX BOA BbeTHaMa Ivan N. Marin^ Temir A. Britayev^ & Arthur Anker^ M.H. MapHH^ T.A. BpHxaeB^ H A. AHKep^ 'Laboratory of Ecology and Morphology of Marine Invertebrates, A.N. Severtzov Institute of Ecology and Evolution RAS, Leninsky prosp., 33, Moscow 117071 Russia. E-mail: [email protected] Jla5opaTopHa SKOnorHH H Mop<J)OJiorHH MopcKHX 5ecno3BOHOHHbix, HncTHTyT npo5jieM SKOnorHH H SBOJIIOIJHH HM. A.H. CcBepijoBa PAH, JleHHHCKHH npocncKT, 33, MocKBa 117071 Poccna. ^Department of Biological Sciences, University of Alberta, Edmonton Canada T6G 2E1. E-mail: [email protected] OaKyjibTCT 5HOJiorHH, ynHBepcHTeT niTaxa Ajib5epTa, S^MOHTOH Kanaka T6G 2E1. KEY WORDS: fauna, shrimps, Pontoniinae, Viet Nam, symbionts, cnidarian-associated. KJIIOHEBtlE CJIOBA: (jjayna, KpcBCTKH, Pontoniinae, BtcTnaM, CHMGnonTti, KHmcHnononocTntie. ABSTRACT. In the paper, the descriptions of 10 sp. n iiepnanTycoM Cerianthus sp. B c6opax c Kononnn species of cnidarian-associated pontoniine shrimps, new KopanjioB o6napy>Keno TaioKC Tpn Bn;ia KpcBCTOK n3 for the fauna of Viet Nam, are given. Coralliocaris pojiaPericlimenaeus (P. hecate, P. rhodope u P. quadri nudirostris and Philarius lifuensis are apparently associ dentatus), KOToptie npe;inoi[o>KnTein.no ne SLBJISLIOTCSL ated with acroporid corals, and Harpiliopsis spinigera is cnM6nonTaMn RnmcHnononocTntix, apaccMaTpnBaioTCH associated with pocilloporid corals. Palaemonella rotu KaK cnM6nonTi>i ry6oK n TynnxaT, npnKpenjiaioninxcH K mama axe found on both acroporid and pocilloporid KOJionnHM KopanjioB. TaKnM o6pa30M, c yncTOM namnx corals. -
Species at Risk on Department of Defense Installations
Species at Risk on Department of Defense Installations Revised Report and Documentation Prepared for: Department of Defense U.S. Fish and Wildlife Service Submitted by: January 2004 Species at Risk on Department of Defense Installations: Revised Report and Documentation CONTENTS 1.0 Executive Summary..........................................................................................iii 2.0 Introduction – Project Description................................................................. 1 3.0 Methods ................................................................................................................ 3 3.1 NatureServe Data................................................................................................ 3 3.2 DOD Installations............................................................................................... 5 3.3 Species at Risk .................................................................................................... 6 4.0 Results................................................................................................................... 8 4.1 Nationwide Assessment of Species at Risk on DOD Installations..................... 8 4.2 Assessment of Species at Risk by Military Service.......................................... 13 4.3 Assessment of Species at Risk on Installations ................................................ 15 5.0 Conclusion and Management Recommendations.................................... 22 6.0 Future Directions............................................................................................. -
Habitat Distribution and Abundance of Crayfishes in Two Florida Spring-Fed Rivers
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2016 Habitat distribution and abundance of crayfishes in two Florida spring-fed rivers Tiffani Manteuffel University of Central Florida Part of the Biology Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Masters Thesis (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation Manteuffel, Tiffani, "Habitat distribution and abundance of crayfishes in two Florida spring-fed rivers" (2016). Electronic Theses and Dissertations, 2004-2019. 5230. https://stars.library.ucf.edu/etd/5230 HABITAT DISTRIBUTION AND ABUNDANCE OF CRAYFISHES IN TWO FLORIDA SPRING-FED RIVERS by TIFFANI MANTEUFFEL B.S. Florida State University, 2012 A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science in the Department of Biology in the College of Sciences at the University of Central Florida Orlando, Florida Fall Term 2016 Major Professor: C. Ross Hinkle © 2016 Tiffani Manteuffel ii ABSTRACT Crayfish are an economically and ecologically important invertebrate, however, research on crayfish in native habitats is patchy at best, including in Florida, even though the Southeastern U.S. is one of the most speciose areas globally. This study investigated patterns of abundance and habitat distribution of two crayfishes (Procambarus paeninsulanus and P. fallax) in two Florida spring-fed rivers (Wakulla River and Silver River, respectively). -
Perspectives on Typhlatya (Crustacea, Decapoda)
Contributions to Zoology, 65 (2) 79-99 (1995) SPB Academic Publishing bv, Amsterdam New perspectives on the evolution of the genus Typhlatya (Crustacea, Decapoda): first record of a cavernicolous atyid in the Iberian Peninsula, Typhlatya miravetensis n. sp. Sebastián Sanz & Dirk Platvoet 1 Unitat d'Ecologia, Facultat de Ciències Biologiques, Universitat de Valencia, E-46100 Burjassot, 2 Valencia, Spain; Institutefor Systematics and Population Biology (Zoological Museum, Amsterdam), University of Amsterdam, P.O. Box 94766, 1090 GT Amsterdam, The Netherlands Keywords: Typhlatya, Decapoda, Spain, subterranean waters, systematics, zoogeography, vicariance, evolution, key to genus Abstract historia geológica de la zona y la distribución mundial del género, del grupo de géneros, y la familia. On several occasions, shrimps belonging to a new species ofthe genus Typhlatya were collected in a cave in the province of Castellón, Spain. This is the first record of the in the genus Introduction Iberian Peninsula. The species is described and the validity, dis- tribution, and zoogeography of the genus, as well as the status In 1993 and were on several of the discussed. 1994, shrimps caught genus Spelaeocaris, are Former models for the occasions in in the evolution of the genus Typhlatya and its genus group are re- a cave near Cabanes, province viewed, as well asthe system ofinner classification of the Atyidae of Castellón, eastern Spain. The specimens belong and its For the and evolution of biogeographical meaning. age the to genus Typhlatya Creaser, 1936, a genus the genus we developed a new model based on vicariance prin- with members known from the Galápagos Islands, ciples that involves further evolution of each species after the Ascension and the Caribbean of the ancestral This allows estimations Island, Bermuda, disruption range. -
Behavioral Responses of the Endemic Shrimp Halocaridina Rubra
Behavioral Responses of the Endemic Shrimp Halocaridina rubra (Malacostraca: Atyidae) to an Introduced Fish, Gambusia affinis (Actinopterygii: Poeciliidae) and Implications for the Trophic Structure of Hawaiian Anchialine Ponds1 Krista A. Capps,2 Caroline B. Turner,2 Michael T. Booth,2 Danica L. Lombardozzi,2 Scott H. McArt,4 David Chai,3 and Nelson G. Hairston Jr.2,5 Abstract: In the Hawaiian Islands, intentionally introduced exotic fishes have been linked to changes in native biodiversity and community composition. In 1905, the mosquito fish Gambusia affinis was introduced to control mosquitoes. Subsequently, G. affinis spread throughout the Islands and into coastal anchia- line ponds. Previous studies suggest that presence of invasive fishes in anchialine ponds may eliminate native species, including the endemic shrimp Halocaridina rubra. We examined effects of G. affinis on H. rubra populations in anchialine ponds on the Kona-Kohala coast of the island of Hawai‘i. In the presence of G. affinis, H. rubra exhibited a diel activity pattern that was not seen in fishless ponds. Shrimp in ponds with fish were active only at night. This pattern was ev- ident in anchialine ponds and in laboratory experiments. In laboratory predation experiments, G. affinis preferentially consumed smaller H. rubra, and in the field the H. rubra collected from invaded sites were larger than those from fishless ponds. Analysis of trophic position using stable isotope analyses showed that feeding of H. rubra was not significantly distinct from that of snails, assumed to feed at trophic level 2.0 on epilithic algae, but G. affinis was slightly omnivo- rous, feeding at tropic level 2.2. -
Zootaxa, Pontoniine Shrimps (Decapoda: Palaemonidae)
Zootaxa 1137: 1–36 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1137 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) Pontoniine shrimps (Decapoda: Palaemonidae) from the island of Socotra, with descriptions of new species of Dactylonia Fransen, 2002 and Periclimenoides Bruce, 1990 A. J. BRUCE Queensland Museum, P.O. Box 3300, South Brisbane, Australia 4101. E-mail: [email protected] Table of contents Abstract ............................................................................................................................................. 2 Introduction ....................................................................................................................................... 2 Taxonomy .......................................................................................................................................... 2 Conchodytes meleagrinae Peters, 1852 ............................................................................................ 3 Coralliocaris sp. ................................................................................................................................ 3 Dactylonia carinicula sp. nov. .......................................................................................................... 4 Key to the Indo-West Pacific Species of Dactylonia Fransen, 2002 .............................................. 13 Harpiliopsis depressa (Stimpson, 1860) .........................................................................................14 -
Index to Volume 53
Index to Volume 53 Author Index ABURTO-OROPEZA, OCTAVIo-see Sala et al. EWING, CURTIS ALLEN, MELINDA S., and GAIL M. MURAKAMI The Endemic Hawaiian Sap Beetles (Coleoptera: Liina'i Island's Arid Lowland Vegetation in Late Nitidulidae): Distribution, Ecological Shifts, and Prehistory, 88-112 Adaptation (abstract), 114-115 ARREOLA-RoBLES, JosE L.-see Sala et al. ASQUITH, ADAM-see Kido et al. ATAN, HUGO-see Osorio et al. FILARDI, CHRISTOPHER E., CATHERINE E. SMITH, ATKINSON, MARLIN J.-see Tarrant et al. ANDREW W. KRATTER, DAVID W. STEADMAN, and ATKINSON, SHANNON-See Tarrant et al. H. PRICE WEBB New Behavioral, Ecological, and Biogeographic Data BAILEy-BROCK, JULIE H. on the Avifauna of Rennell, Solomon Islands, 319 NeriIlidae of Hawai'i: Two New Records of 340 Interstitial Polychaetes, 299-304 FLETCHER, CHARLES H., III-see Harney et al. see also Brock et al. FOALE, SIMON BAILEy-BROCK, JULIE H., VERNON R. BROCK, and Local Ecological Knowledge and Biology of the Land RiCHARD E. BROCK Crab Cardisoma hirtipes (Decapoda: Gecarcinidae) Intrusion of Anchialine Species in the Marine at West Nggela, Solomon Islands, 37-49 Environment: The Appearance of an Endemic FOSTER, JAMIE S. Hawaiian Shrimp, Halocaridina rubra, on the South Lipopolysaccharide-Induced Apoptosis in the Shore ofO'ahu (Hawaiian Islands), 367-369 Symbiotic Light Organ of the Sepiolid Squid BIRKELAND, C. E.-see Green et al. Euprymna scolopes (abstract), liS BROCK, RICHARD E.-see Bailey-Brock et al. BROCK, RiCHARD, JULIE H. BAILEy-BROCK, and JOHN GARB, JESSICA E. GOODY Origins ofthe Hawaiian Crab Spider Fauna (abstract), A Case Study of Efficacy of Freshwater Immersion in 115-116 Controlling Introduction of Alien Marine Fouling GARRISON, JENNIFER Communities: The USS Missouri, 223-231 Role of Alien Tree Plantations in Native Forest BROCK, VERNON R.-see Bailey-Brock et al. -
Parts 1 to 199
LIST OF APPENDICES APPENDIX A Ground Water Quality Assessment APPENDIX B Marine Environmental Assessment; Marine Water Quality Assessment APPENDIX C Botanical Survey APPENDIX D Avifaunal and Feral Mammal Survey; Terrestrial Invertebrate Resources Survey APPENDIX E Archaeological Inventory Survey APPENDIX F Cultural Impact Assessment APPENDIX G Traffic Impact Assessment Report APPENDIX H Acoustic Study APPENDIX I Air Quality Study APPENDIX J Civil and Electrical Infrastructure Assessment APPENDIX K Market Assessment APPENDIX L Economic and Fiscal Impact Assessment APPENDIX M April 13, 2007, LUC Hearing (Docket Number A07-774) Testimony APPENDIX N Water Board of the County of Hawaii Resolution No. 08-08 MARINE ENVIRONMENTAL ASSESSMENT O’OMA BEACHSIDE VILLAGE NORTH KONA, HAWAII MARINE COMMUNITY STRUCTURE Prepared for O'oma Beachside Village LLC Prepared by Marine Research Consultants, Inc. 1039 Waakaua Pl. Honolulu, HI 96822 May 2008 I. INTRODUCTION The proposed O’oma Beachside Village is located on a 303-acre property in North Kona approximately one mile south of the Keahole Airport and seven miles north of Kailua- Kona. The property (project site) is bounded to the east by the Queen Kaahumanu Highway, on the west by the Pacific Ocean, and lies between the Natural Energy Laboratory of Hawaii Authority (NELHA) and Hawaii Ocean Science and Technology (HOST) Park to the north, and the Shores at Kohana’iki Development to the south (Figure 1). O’oma Beachside Village will be a master-planned residential community with a full range of mixed uses including housing, mixed-use commercial, preserves, parks, trails, and shoreline access. In total, there will be 950 to 1,200 homes, which will include multi-family units, “live-work” or mixed-use homes, workforce, gap and affordable homes, and single-family home lots. -
AN ENUMERATION of the CRUSTACEA DECAPODA NATANTIA INHABITING SUBTERRANEAN WATERS L.-B Holthuis
AN ENUMERATION OF THE CRUSTACEA DECAPODA NATANTIA INHABITING SUBTERRANEAN WATERS L.-B Holthuis To cite this version: L.-B Holthuis. AN ENUMERATION OF THE CRUSTACEA DECAPODA NATANTIA INHABIT- ING SUBTERRANEAN WATERS. Vie et Milieu , Observatoire Océanologique - Laboratoire Arago, 1956, 7 (1), pp.43-76. hal-02748877 HAL Id: hal-02748877 https://hal.sorbonne-universite.fr/hal-02748877 Submitted on 3 Jun 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. AN ENUMERATION OF THE CRUSTACEA DECAPODA NATANTIA INHABITING SUBTERRANEAN WATERS par L.-B. HOLTHUIS Rijksmuseum van Natuurlijke Historié, Leiden, Holland The présent paper provides a list of the macrurous Decapod Crustacea, belonging to the supersection Natantia, that have been found in subterranean waters. The number of such species is quite small, being somewhat more than 40 in ail. Of thèse only part are actual troglobic forms, i.e. animais that are only known from caves and have not, or only incidentally, been found in waters that are exposed to daylight. A second group is formed by species that normally live in surface waters and only occasionally are met with in subterranean habitats. No sharp line can be drawn between thèse two catégories, the more so as at présent still extremely little is known of the biology and of the ecology of most of the species.