Morphological and Molecular Phylogeny of Bitis (Reptilia: Squamata: Viperidae)
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Biodiversity in Sub-Saharan Africa and Its Islands Conservation, Management and Sustainable Use
Biodiversity in Sub-Saharan Africa and its Islands Conservation, Management and Sustainable Use Occasional Papers of the IUCN Species Survival Commission No. 6 IUCN - The World Conservation Union IUCN Species Survival Commission Role of the SSC The Species Survival Commission (SSC) is IUCN's primary source of the 4. To provide advice, information, and expertise to the Secretariat of the scientific and technical information required for the maintenance of biologi- Convention on International Trade in Endangered Species of Wild Fauna cal diversity through the conservation of endangered and vulnerable species and Flora (CITES) and other international agreements affecting conser- of fauna and flora, whilst recommending and promoting measures for their vation of species or biological diversity. conservation, and for the management of other species of conservation con- cern. Its objective is to mobilize action to prevent the extinction of species, 5. To carry out specific tasks on behalf of the Union, including: sub-species and discrete populations of fauna and flora, thereby not only maintaining biological diversity but improving the status of endangered and • coordination of a programme of activities for the conservation of bio- vulnerable species. logical diversity within the framework of the IUCN Conservation Programme. Objectives of the SSC • promotion of the maintenance of biological diversity by monitoring 1. To participate in the further development, promotion and implementation the status of species and populations of conservation concern. of the World Conservation Strategy; to advise on the development of IUCN's Conservation Programme; to support the implementation of the • development and review of conservation action plans and priorities Programme' and to assist in the development, screening, and monitoring for species and their populations. -
A Phylogeny and Revised Classification of Squamata, Including 4161 Species of Lizards and Snakes
BMC Evolutionary Biology This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes BMC Evolutionary Biology 2013, 13:93 doi:10.1186/1471-2148-13-93 Robert Alexander Pyron ([email protected]) Frank T Burbrink ([email protected]) John J Wiens ([email protected]) ISSN 1471-2148 Article type Research article Submission date 30 January 2013 Acceptance date 19 March 2013 Publication date 29 April 2013 Article URL http://www.biomedcentral.com/1471-2148/13/93 Like all articles in BMC journals, this peer-reviewed article can be downloaded, printed and distributed freely for any purposes (see copyright notice below). Articles in BMC journals are listed in PubMed and archived at PubMed Central. For information about publishing your research in BMC journals or any BioMed Central journal, go to http://www.biomedcentral.com/info/authors/ © 2013 Pyron et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes Robert Alexander Pyron 1* * Corresponding author Email: [email protected] Frank T Burbrink 2,3 Email: [email protected] John J Wiens 4 Email: [email protected] 1 Department of Biological Sciences, The George Washington University, 2023 G St. -
Patterns of Species Richness, Endemism and Environmental Gradients of African Reptiles
Journal of Biogeography (J. Biogeogr.) (2016) ORIGINAL Patterns of species richness, endemism ARTICLE and environmental gradients of African reptiles Amir Lewin1*, Anat Feldman1, Aaron M. Bauer2, Jonathan Belmaker1, Donald G. Broadley3†, Laurent Chirio4, Yuval Itescu1, Matthew LeBreton5, Erez Maza1, Danny Meirte6, Zoltan T. Nagy7, Maria Novosolov1, Uri Roll8, 1 9 1 1 Oliver Tallowin , Jean-Francßois Trape , Enav Vidan and Shai Meiri 1Department of Zoology, Tel Aviv University, ABSTRACT 6997801 Tel Aviv, Israel, 2Department of Aim To map and assess the richness patterns of reptiles (and included groups: Biology, Villanova University, Villanova PA 3 amphisbaenians, crocodiles, lizards, snakes and turtles) in Africa, quantify the 19085, USA, Natural History Museum of Zimbabwe, PO Box 240, Bulawayo, overlap in species richness of reptiles (and included groups) with the other ter- Zimbabwe, 4Museum National d’Histoire restrial vertebrate classes, investigate the environmental correlates underlying Naturelle, Department Systematique et these patterns, and evaluate the role of range size on richness patterns. Evolution (Reptiles), ISYEB (Institut Location Africa. Systematique, Evolution, Biodiversite, UMR 7205 CNRS/EPHE/MNHN), Paris, France, Methods We assembled a data set of distributions of all African reptile spe- 5Mosaic, (Environment, Health, Data, cies. We tested the spatial congruence of reptile richness with that of amphib- Technology), BP 35322 Yaounde, Cameroon, ians, birds and mammals. We further tested the relative importance of 6Department of African Biology, Royal temperature, precipitation, elevation range and net primary productivity for Museum for Central Africa, 3080 Tervuren, species richness over two spatial scales (ecoregions and 1° grids). We arranged Belgium, 7Royal Belgian Institute of Natural reptile and vertebrate groups into range-size quartiles in order to evaluate the Sciences, OD Taxonomy and Phylogeny, role of range size in producing richness patterns. -
Calibrating the Tree of Vipers Under the Fossilized Birth-Death Model Jiří Šmíd 1,2,3,4 & Krystal A
www.nature.com/scientificreports OPEN Calibrating the tree of vipers under the fossilized birth-death model Jiří Šmíd 1,2,3,4 & Krystal A. Tolley 1,5 Scaling evolutionary trees to time is essential for understanding the origins of clades. Recently Received: 18 September 2018 developed methods allow including the entire fossil record known for the group of interest and Accepted: 15 February 2019 eliminated the need for specifying prior distributions for node ages. Here we apply the fossilized birth- Published: xx xx xxxx death (FBD) approach to reconstruct the diversifcation timeline of the viperines (subfamily Viperinae). Viperinae are an Old World snake subfamily comprising 102 species from 13 genera. The fossil record of vipers is fairly rich and well assignable to clades due to the unique vertebral and fang morphology. We use an unprecedented sampling of 83 modern species and 13 genetic markers in combination with 197 fossils representing 28 extinct taxa to reconstruct a time-calibrated phylogeny of the Viperinae. Our results suggest a late Eocene-early Oligocene origin with several diversifcation events following soon after the group’s establishment. The age estimates inferred with the FBD model correspond to those from previous studies that were based on node dating but FBD provides notably narrower credible intervals around the node ages. Viperines comprise two African and an Eurasian clade, but the ancestral origin of the subfamily is ambiguous. The most parsimonious scenarios require two transoceanic dispersals over the Tethys Sea during the Oligocene. Scaling phylogenetic trees to time is one of the major challenges in evolutionary biology. Reliable estimates for the age of evolutionary events are essential for addressing a wide array of questions, such as deciphering micro- and macroevolutionary processes, identifying drivers of biodiversity patterns, or understanding the origins of life1. -
Denisonia Hydrophis Parapistocalamus Toxicocalamus Disteira Kerilia Pelamis Tropidechis Drysdalia Kolpophis Praescutata Vermicella Echiopsis Lapemis
The following is a work in progress and is intended to be a printable quick reference for the venomous snakes of the world. There are a few areas in which common names are needed and various disputes occur due to the nature of such a list, and it will of course be continually changing and updated. And nearly all species have many common names, but tried it simple and hopefully one for each will suffice. I also did not include snakes such as Heterodon ( Hognoses), mostly because I have to draw the line somewhere. Disclaimer: I am not a taxonomist, that being said, I did my best to try and put together an accurate list using every available resource. However, it must be made very clear that a list of this nature will always have disputes within, and THIS particular list is meant to reflect common usage instead of pioneering the field. I put this together at the request of several individuals new to the venomous endeavor, and after seeing some very blatant mislabels in the classifieds…I do hope it will be of some use, it prints out beautifully and I keep my personal copy in a three ring binder for quick access…I honestly thought I knew more than I did…LOL… to my surprise, I learned a lot while compiling this list and I hope you will as well when you use it…I also would like to thank the following people for their suggestions and much needed help: Dr.Wolfgang Wuster , Mark Oshea, and Dr. Brian Greg Fry. -
A DNA Barcoding Reference Database for Priority Southern African Snakes
581 A DNA barcoding reference database for priority southern African snakes 1,2Mimmie M. Kgaditse, 1M. Mwale, and 1A. Kotze 1National Zoological Gardens of South Africa, PO BOX 754, Pretoria 0001, South Africa. 2University of the Witwatersrand, APES, P/Bag 3, Johannesburg, South Africa ABSTRACT Anthropogenic impacts on the environment have led to drastic effects on community assemblies and the diversity of species. Given their ectothermic physiological characteristics and specific niche requirements, several southern African snakes are particularly vulnerable to these effects. There is also a need for monitoring the legal trade of snake species to ensure that only non-regulated species are collected from the wild. The aim of this study was to set up a DNA barcoding species reference database of priority species that are currently listed as threatened or endangered on CITES appendices and IUCN Red lists and also included on permit requests for the pet trade. Look-alikes species whose specimens have similar features and can be confused with priority species that are illegal to trade for conservation reasons were also included. APPROACH The priority and look-alike species To demonstrate the utility and effectiveness of DNA barcoding for species PRIORITY SPECIES LOOK-ALIKES identification of southern African snakes for use in the investigating and 1) Bitis albanica (Albany adder) Bitis arietans (Puff adder) 2) Bitis armata (Southern adder) Bitis atropos (Cape Berg adder) prosecution of illegal wildlife crime involving species; 3) Bitis gabonica (Gaboon adder) Bitis caudalis (Horned adder) 4) Bitis inornata (Plain mountain adder) Bitis cornuta (Many horned adder) Species selection: Priority listing Bitis rubida (Red adder) Species were selected for inclusion into the Barcode of Wildlife Project Bitis schneideri (Namaqua dwarf adder) Bitis xeropaga (Desert mountain adder) (BWP) databases based on their CITES listed and threatened species Bitis nasicornis (Rhinoceros viper) status in South Africa. -
Stolen Wildlife III the EU – a Main Hub and Destination for Illegally Caught Exotic Pets
STOLEN WILDLIFE III THE EU – a main hUB AND DESTINATION FOR ILLEGALLY CAUGHT EXOTIC PETS A report by Dr. Sandra Altherr & Katharina Lameter 4 • STOLEN WILDLIFE III: THE EU – a main hub and destinaTION FOR ILLEGALLY CAUGHT EXOTIC PETS 1 SUMMARY 6 2 INTRODUCTION 7 3 CASE STUDIES 8 MEXICO 8 CUBA 10 COSTA RICA 12 BRAZIL 14 NAMIBIA & SOUTH AFRICA 16 OMAN 19 SRI LANKA 20 JAPAN 22 AUSTRALIA 24 NEW CALEDONIA 26 LEGAL SOLUTIONS FOR 4 THE EUROPEAN UNION 28 HOW MANY CITES-listiNGS ARE REALISTIC? 28 WOULD CITES APPENDIX III LISTINGS SOLVE THE PROBLEM? 29 WHY AN EU LACEY ACT IS NEEDED 29 STOLEN WILDLIFE III: THE EU – a main hub and destinaTION FOR ILLEGALLY CAUGHT EXOTIC PETS • 5 CONCLUSIONS AND 5 RECOMMENDATIONS 32 CONCLUSIONS 32 RECOMMENDATIONS 33 6 REFERENCES 34 GLOSSARY AOO: Area of Occupancy CITES: Convention on International Trade in Endangered Species of Wild Fauna and Flora EFFACE: European Union Action to Fight Environmental Crime (EU-funded research project) EOO: Extent of Occurrence EU: European Union F1: At least one of the parents is wild-caught IUCN: International Union for Conservation of Nature LCES: Law for the Conservation of Endangered Species of Wild Fauna and Flora UNEP-WCMC: United Nations Environment Programme‘s World Conservation Monitoring Centre UNODC: United Nations Office on Drugs and Crime 6 • STOLEN WILDLIFE III: THE EU – a main hub and destinaTION FOR ILLEGALLY CAUGHT EXOTIC PETS 1. SUMMARY The present report is the third edition of Pro Wildlife’s • Traders openly offer animals on the European “Stolen Wildlife” series and illustrates how wildlife exotic pet market, which are clearly of illegal origin, traffickers are targeting a broad range of rare spe- and bluntly justify higher prices by praising their cies from a variety of different geographic regions. -
National Biodiversity Assessment 2018 Technical Report Vol
National Biodiversity Assessment 2018 Technical Report Vol. 7: Genetic Diversity National Biodiversity Assessment 2018 TECHNICAL REPORT Volume 7: Genetic Diversity REPORT NUMBER: http://hdl.handle.net/20.500.12143/6376 National Biodiversity Assessment 2018 Technical Report Vol. 7: Genetic Diversity CITATION FOR THIS REPORT: Tolley, K.A., da Silva, J.M. & Jansen van Vuuren, B. 2019. South African National Biodiversity Assessment 2018 Technical Report Volume 7: Genetic Diversity. South African National Biodiversity Institute, Pretoria. http://hdl.handle.net/20.500.12143/6376 PREPARED BY: Tolley, K.A., da Silva, J.M., Jansen van Vuuren, B., Bishop, J., Dalton, D., du Plessis, M., Labuschagne, K., Kotze, A., Masehela, T., Mwale, M., Selier. J., Šmíd, J., Suleman, E., Visser, J., & von der Heyden, S. REVIEWER: Sean Hoban CONTACT PERSON: Krystal A. Tolley: [email protected] The NBA 2018 was undertaken primarily during 2015 to early 2019 and therefore the names and acronyms of government departments in existence during that period are used throughout the NBA reports. Please refer to www.gov.za to see that changes in government departments that occurred in mid-2019. 2 National Biodiversity Assessment 2018 Technical Report Vol. 7: Genetic Diversity This report forms part of a set of reports, datasets and supplementary materials that make up the South African National Biodiversity Assessment 2018. Please see the website [http://nba.sanbi.org.za/] for full accessibility to all materials. SYNTHESIS REPORT For reference in scientific publications Skowno, A.L., Poole, C.J., Raimondo, D.C., Sink, K.J., Van Deventer, H., Van Niekerk, L., Harris, L.R., Smith-Adao, L.B., Tolley, K.A., Zengeya, T.A., Foden, W.B., Midgley, G.F. -
Lists of Species That Are Threatened Or Protected, Activities That Are Prohibited and Exemption from Restriction
104 No. 36375 GOVERNMENT GAZETTE, 16 APRIL 2013 NOTICE 389 OF 2013 NATIONAL ENVIRONMENTAL MANAGEMENT: BIODIVERSITY ACT, 2004 (ACT NO. 10 OF 2004) PUBLICATION OF LISTS OF SPECIES THAT ARE THREATENED OR PROTECTED, ACTIVITIES THAT ARE PROHIBITED AND EXEMPTION FROM RESTRICTION I, Bomo Edith Edna Molewa, Minister of Water and Environmental Affairs, hereby give notice of my intention, under sections 56(1), 57(2) and 57(4)(a) read with section 63 and 100 of the National Environmental Management: Biodiversity Act, 2004 (Act No. 10 of 2004), to publish lists of species that are threatened or in need of protection and activities that are prohibited; and to exempt persons from the restriction contemplated in section 57(1) set out in the Schedule hereto. Members of the public are invited to submit to the Minister, within 60 (sixty) days after the publication of the notice in the Gazette, written comments or inputs to the following addresses: By post to: The Director-General: Department of Environmental Affairs Attention: Ms Magdel Boshoff Private Bag X 447 Pretoria 0001 By hand at: 2nd Floor (Reception), Fedsure Forum Building, 315 Pretorius Street, Pretoria, 0001. By e-mail: mboshoffenvironment.qov.za or by fax to: (012) 320 7026. Comments received after the closing date may not be considered. BOMO EDI NA OLEWA MINISTER OF WATER AND ENVIRONMENTAL AFFAIRS STAATSKOERANT, 16 APRIL 2013 No. 36375 105 SCHEDULE 1. Definitions In this Schedule and Appendix, unless the context indicates otherwise, a word or expression, to which a meaning has been assigned in National Environmental Management: Biodiversity Act, 2004 (Act No. -
Table 7: Species Changing IUCN Red List Status (2017-2018)
IUCN Red List version 2018-2: Table 7 Last Updated: 14 November 2018 Table 7: Species changing IUCN Red List Status (2017-2018) Published listings of a species' status may change for a variety of reasons (genuine improvement or deterioration in status; new information being available that was not known at the time of the previous assessment; taxonomic changes; corrections to mistakes made in previous assessments, etc. To help Red List users interpret the changes between the Red List updates, a summary of species that have changed category between 2017 (IUCN Red List version 2017-3) and 2018 (IUCN Red List version 2018-2) and the reasons for these changes is provided in the table below. IUCN Red List Categories: EX - Extinct, EW - Extinct in the Wild, CR - Critically Endangered [CR(PE) - Critically Endangered (Possibly Extinct), CR(PEW) - Critically Endangered (Possibly Extinct in the Wild)], EN - Endangered, VU - Vulnerable, LR/cd - Lower Risk/conservation dependent, NT - Near Threatened (includes LR/nt - Lower Risk/near threatened), DD - Data Deficient, LC - Least Concern (includes LR/lc - Lower Risk, least concern). Reasons for change: G - Genuine status change (genuine improvement or deterioration in the species' status); N - Non-genuine status change (i.e., status changes due to new information, improved knowledge of the criteria, incorrect data used previously, taxonomic revision, etc.); E - Previous listing was an Error. IUCN Red List IUCN Red Reason for Red List Scientific name Common name (2017) List (2018) change version Category -
The Evolution of Coral Snake Mimicry
University of Mississippi eGrove Electronic Theses and Dissertations Graduate School 1-1-2019 The Evolution Of Coral Snake Mimicry Renan Janke Bosque Follow this and additional works at: https://egrove.olemiss.edu/etd Part of the Biology Commons Recommended Citation Janke Bosque, Renan, "The Evolution Of Coral Snake Mimicry" (2019). Electronic Theses and Dissertations. 1927. https://egrove.olemiss.edu/etd/1927 This Dissertation is brought to you for free and open access by the Graduate School at eGrove. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of eGrove. For more information, please contact [email protected]. THE EVOLUTION OF CORAL SNAKE MIMICRY A dissertation Submitted to the graduate faculty in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Biology Department The University of Mississippi by Renan Janke Bosque, B.S; M.S. December 2019 Copyright © 2019 by Renan Janke Bosque All rights reserved. ABSTRACT Scientists have regarded mimicry as one of the most amazing examples of the power of natural selection. Early observations by naturalists of the mimetic association between venomous New World coral snakes of the genus Micrurus and harmless mimics has stimulated an intense debate about the causes and consequences of mimicry that persists today. Despite its medical, evolutionary and historical importance our understanding of evolution within the genus Micrurus is negligible. My dissertation explores the evolution of mimicry within South American coral snakes and their mimics using a multi-scale framework involving macroevolutionary (Chapter I), geographic/morphological concordance (Chapters II and III), behavioral (Chapter IV), and phylogeographic (Chapter V) approaches. -
Table S3.1. Habitat Use of Sampled Snakes. Taxonomic Nomenclature
Table S3.1. Habitat use of sampled snakes. Taxonomic nomenclature follows the current classification indexed in the Reptile Database ( http://www.reptile-database.org/ ). For some species, references may reflect outdated taxonomic status. Individual species are coded for habitat association according to Table 3.1. References for this table are listed below. Habitat use for species without a reference were inferred from sister taxa. Broad Habitat Specific Habit Species Association Association References Acanthophis antarcticus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis laevis Semifossorial Terrestrial-Fossorial O'Shea, 1996 Acanthophis praelongus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis pyrrhus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis rugosus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis wellsi Semifossorial Terrestrial-Fossorial Cogger, 2014 Achalinus meiguensis Semifossorial Subterranean-Debris Wang et al., 2009 Achalinus rufescens Semifossorial Subterranean-Debris Das, 2010 Acrantophis dumerili Terrestrial Terrestrial Andreone & Luiselli, 2000 Acrantophis madagascariensis Terrestrial Terrestrial Andreone & Luiselli, 2000 Acrochordus arafurae Aquatic-Mixed Intertidal Murphy, 2012 Acrochordus granulatus Aquatic-Mixed Intertidal Lang & Vogel, 2005 Acrochordus javanicus Aquatic-Mixed Intertidal Lang & Vogel, 2005 Acutotyphlops kunuaensis Fossorial Subterranean-Burrower Hedges et al., 2014 Acutotyphlops subocularis Fossorial Subterranean-Burrower Hedges et al., 2014