Case Report Orbital Infection by Saksenaea Vasiformis in an Immunocompetent Host
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Molecular Identification of Fungi
Molecular Identification of Fungi Youssuf Gherbawy l Kerstin Voigt Editors Molecular Identification of Fungi Editors Prof. Dr. Youssuf Gherbawy Dr. Kerstin Voigt South Valley University University of Jena Faculty of Science School of Biology and Pharmacy Department of Botany Institute of Microbiology 83523 Qena, Egypt Neugasse 25 [email protected] 07743 Jena, Germany [email protected] ISBN 978-3-642-05041-1 e-ISBN 978-3-642-05042-8 DOI 10.1007/978-3-642-05042-8 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2009938949 # Springer-Verlag Berlin Heidelberg 2010 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilm or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Cover design: WMXDesign GmbH, Heidelberg, Germany, kindly supported by ‘leopardy.com’ Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Dedicated to Prof. Lajos Ferenczy (1930–2004) microbiologist, mycologist and member of the Hungarian Academy of Sciences, one of the most outstanding Hungarian biologists of the twentieth century Preface Fungi comprise a vast variety of microorganisms and are numerically among the most abundant eukaryotes on Earth’s biosphere. -
Saksenaea Loutrophoriformis Fungal Planet Description Sheets 377
376 Persoonia – Volume 38, 2017 Saksenaea loutrophoriformis Fungal Planet description sheets 377 Fungal Planet 622 – 20 June 2017 Saksenaea loutrophoriformis D.A. Sutton, Stchigel, Chander, Guarro & Cano, sp. nov. Etymology. From the ancient Greek λουτροφόρος-, and from the Latin Based on a megablast search of NCBIs GenBank nucleotide -forma, because of the vessel-shape of the sporangiophore. database, the closest hit with the ex-type strain using the Classification — Saksenaeaceae, Mucorales, Mucoromy- ITS sequence is Saksenaea vasiformis PWQ2338 (GenBank cotina. KP132601; Identities = 694/739 (94 %), Gaps 27/739 (3 %)); using the LSU sequence it is Saksenaea erythrospora strain Hyphae sparsely septate, branched, hyaline, smooth-walled, UTHSC 06-576 (GenBank HM776683; Identities = 714/735 3–15 μm wide. Sporangiophores erect, generally arising singly, (97 %), Gaps 3/735 (0 %)); and using the EF1-α sequence it is at first hyaline, soon becoming brown, unbranched, 50–75 μm Saksenaea vasiformis strain FMR 10131 (HM776689; Identities long, 5–10 μm wide, slightly verrucose. Sporangia terminal, = 465/477 (97 %), no gaps). Our phylogenetic tree, built from multi-spored, flask-shaped, asperulate, 70–125 μm long, with the ITS, LSU, and EF1-α nucleotide sequences, corroborated a long (60–100 μm) neck; apex of the neck closed with a mu- that our isolates represent a new species, the closest species cilaginous plug. Sporangiospores mostly bacilliform, bilaterally being S. vasiformis, with 93.6 % similarity with respect to the compressed and rounded at both ends, more or less trapezoidal ex-type strain (NRRL 2443). The sporangiospores of S. loutro- in lateral view, smooth-walled, 3.5–6(–7) × 2–3.5 μm, pale olive phoriformis are similar in size to the S. -
Saksenaea Vasiformis Causing Cutaneous Zygomycosis: an Experience from Tertiary Care Hospital in Mumbai Microbiology Section Microbiology
DOI: 10.7860/JCDR/2018/33895.11720 Original Article Saksenaea vasiformis Causing Cutaneous Zygomycosis: An Experience from Tertiary Care Hospital in Mumbai Microbiology Section Microbiology SHASHIR WASUDEORAO WANJARE1, SULMAZ FAYAZ RESHI2, PREETI RAJIV MEHTA3 ABSTRACT was retrieved from medical records department. Diagnosis of Introduction: Zygomycosis, a fungal infection caused by a zygomycosis was based on 10% Potassium Hydroxoide (KOH) group of filamentous fungi, Zygomycetes. Zygomycetes belong examination, culture on Sabouraud’s Dextrose Agar (SDA), to orders Mucorales and Entomorphthorales. Infection occurs identification of fungus by slide culture, Lactophenol Cotton in rhinocerebral, pulmonary, cutaneous, abdominal, pelvic and Blue (LPCB) mount and Water Agar method. disseminated forms. Cutaneous zygomycosis is the third most Results: In the present study, seven cases of cutaneous common presentation, usually occurring as gradual and slowly Zygomycosis caused by emerging pathogen Saksenaea progressive disease but may sometimes become fulminant vasiformis were studied. On analysing these cases, it was found leading to necrotizing lesion and haematogenous dissemination. that break in the skin integrity predisposes to infection. Two Infection caused by Saksenaea vasiformis is rare but are patients were known cases of Diabetes mellitus, while five of emerging pathogens having a tendency to cause infection even them had no underlying associated medical conditions. This in immunocompetent hosts. study shows that although infection with Saksenaea vasiformis Aim: To analyse cases of cutaneous zygomycosis caused is more common in immunocompromised patients but a healthy by Saksenaea vasiformis with respect to risk factors, clinical individuals can be infected and may have a bad prognosis if presentation, causative agents, management and patient diagnosis and treatment is delayed. -
A New European Species of the Opportunistic Pathogenic 2 Genus Saksenaea – S
bioRxiv preprint doi: https://doi.org/10.1101/597955; this version posted April 6, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 A New European Species of The Opportunistic Pathogenic 2 Genus Saksenaea – S. dorisiae Sp. Nov. 3 Roman Labudaa,c*, Andreas Bernreiterb,c, Doris Hochenauerb, Christoph Schüllerb,c, Alena 4 Kubátovád, Joseph Straussb,c and Martin Wagnera,c a 5 Department for Farm Animals and Veterinary Public Health, Institute of Milk Hygiene, Milk Technology and 6 Food Science; Bioactive Microbial Metabolites group (BiMM), University of Veterinary Medicine Vienna, Konrad 7 Lorenz Strasse 24, 3430 Tulln a.d. Donau, Austria 8 bDepartment of Applied Genetics and Cell Biology, Fungal Genetics and Genomics Laboratory, University of 9 Natural Resources and Life Sciences, Vienna (BOKU); Konrad Lorenz Strasse 24, 3430 Tulln a.d. Donau, Austria 10 c Research Platform Bioactive Microbial Metabolites (BiMM), Konrad Lorenz Strasse 24, 3430 Tulln a.d. Donau, 11 Austria 12 d Charles University, Faculty of Science, Department of Botany, Culture Collection of Fungi (CCF), Benátská 2, 13 128 01 Prague 2, Czech Republic 14 15 *Corresponding author. Email: [email protected] 16 17 1 bioRxiv preprint doi: https://doi.org/10.1101/597955; this version posted April 6, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 18 Abstract: A new species Saksenaea dorisiae (Mucoromycotina, Mucorales), recently isolated 19 from a water sample originating from a private well in a rural area of Serbia (Europe), is 20 described and illustrated. -
Biology, Systematics and Clinical Manifestations of Zygomycota Infections
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by IBB PAS Repository Biology, systematics and clinical manifestations of Zygomycota infections Anna Muszewska*1, Julia Pawlowska2 and Paweł Krzyściak3 1 Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawiskiego 5a, 02-106 Warsaw, Poland; [email protected], [email protected], tel.: +48 22 659 70 72, +48 22 592 57 61, fax: +48 22 592 21 90 2 Department of Plant Systematics and Geography, University of Warsaw, Al. Ujazdowskie 4, 00-478 Warsaw, Poland 3 Department of Mycology Chair of Microbiology Jagiellonian University Medical College 18 Czysta Str, PL 31-121 Krakow, Poland * to whom correspondence should be addressed Abstract Fungi cause opportunistic, nosocomial, and community-acquired infections. Among fungal infections (mycoses) zygomycoses are exceptionally severe with mortality rate exceeding 50%. Immunocompromised hosts, transplant recipients, diabetic patients with uncontrolled keto-acidosis, high iron serum levels are at risk. Zygomycota are capable of infecting hosts immune to other filamentous fungi. The infection follows often a progressive pattern, with angioinvasion and metastases. Moreover, current antifungal therapy has often an unfavorable outcome. Zygomycota are resistant to some of the routinely used antifungals among them azoles (except posaconazole) and echinocandins. The typical treatment consists of surgical debridement of the infected tissues accompanied with amphotericin B administration. The latter has strong nephrotoxic side effects which make it not suitable for prophylaxis. Delayed administration of amphotericin and excision of mycelium containing tissues worsens survival prognoses. More than 30 species of Zygomycota are involved in human infections, among them Mucorales are the most abundant. -
Mucormycosis: Botanical Insights Into the Major Causative Agents
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 8 June 2021 doi:10.20944/preprints202106.0218.v1 Mucormycosis: Botanical Insights Into The Major Causative Agents Naser A. Anjum Department of Botany, Aligarh Muslim University, Aligarh-202002 (India). e-mail: [email protected]; [email protected]; [email protected] SCOPUS Author ID: 23097123400 https://www.scopus.com/authid/detail.uri?authorId=23097123400 © 2021 by the author(s). Distributed under a Creative Commons CC BY license. Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 8 June 2021 doi:10.20944/preprints202106.0218.v1 Abstract Mucormycosis (previously called zygomycosis or phycomycosis), an aggressive, liFe-threatening infection is further aggravating the human health-impact of the devastating COVID-19 pandemic. Additionally, a great deal of mostly misleading discussion is Focused also on the aggravation of the COVID-19 accrued impacts due to the white and yellow Fungal diseases. In addition to the knowledge of important risk factors, modes of spread, pathogenesis and host deFences, a critical discussion on the botanical insights into the main causative agents of mucormycosis in the current context is very imperative. Given above, in this paper: (i) general background of the mucormycosis and COVID-19 is briefly presented; (ii) overview oF Fungi is presented, the major beneficial and harmFul fungi are highlighted; and also the major ways of Fungal infections such as mycosis, mycotoxicosis, and mycetismus are enlightened; (iii) the major causative agents of mucormycosis -
Mucormycological Pearls
Mucormycological Pearls © by author Jagdish Chander GovernmentESCMID Online Medical Lecture College Library Hospital Sector 32, Chandigarh Introduction • Mucormycosis is a rapidly destructive necrotizing infection usually seen in diabetics and also in patients with other types of immunocompromised background • It occurs occurs due to disruption of normal protective barrier • Local risk factors for mucormycosis include trauma, burns, surgery, surgical splints, arterial lines, injection sites, biopsy sites, tattoos and insect or spider bites • Systemic risk factors for mucormycosis are hyperglycemia, ketoacidosis, malignancy,© byleucopenia authorand immunosuppressive therapy, however, infections in immunocompetent host is well described ESCMID Online Lecture Library • Mucormycetes are upcoming as emerging agents leading to fatal consequences, if not timely detected. Clinical Types of Mucormycosis • Rhino-orbito-cerebral (44-49%) • Cutaneous (10-16%) • Pulmonary (10-11%), • Disseminated (6-12%) • Gastrointestinal© by (2 -author11%) • Isolated Renal mucormycosis (Case ESCMIDReports About Online 40) Lecture Library Broad Categories of Mucormycetes Phylum: Glomeromycota (Former Zygomycota) Subphylum: Mucormycotina Mucormycetes Mucorales: Mucormycosis Acute angioinvasive infection in immunocompromised© by author individuals Entomophthorales: Entomophthoromycosis ESCMIDChronic subcutaneous Online Lecture infections Library in immunocompetent patients Agents of Mucormycosis Mucorales : Mucormycosis •Rhizopus arrhizus •Rhizopus microsporus var. -
Emerging Mould Infections: Get Prepared to Meet Unexpected Fungi
Emerging mould infections: Get prepared to meet unexpected fungi in your patient Sarah Dellière, Olga Rivero-Menendez, Cécile Gautier, Dea Garcia-Hermoso, Ana Alastruey-Izquierdo, Alexandre Alanio To cite this version: Sarah Dellière, Olga Rivero-Menendez, Cécile Gautier, Dea Garcia-Hermoso, Ana Alastruey-Izquierdo, et al.. Emerging mould infections: Get prepared to meet unexpected fungi in your patient. Medical Mycology, Oxford University Press, 2020, 58 (2), pp.156-162. 10.1093/mmy/myz039. pasteur- 03223966 HAL Id: pasteur-03223966 https://hal-pasteur.archives-ouvertes.fr/pasteur-03223966 Submitted on 11 May 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Copyright Medical Mycology, 2020, 58, 156–162 doi: 10.1093/mmy/myz039 Advance Access Publication Date: 21 May 2019 Review Article Review Article Emerging mould infections: Get prepared to meet unexpected fungi in your patient Downloaded from https://academic.oup.com/mmy/article/58/2/156/5492538 by Institut Pasteur user on 07 May 2021 Sarah Delliere` 1, Olga Rivero-Menendez2,Cecile´ Gautier3, -
Descriptions of Medical Fungi
DESCRIPTIONS OF MEDICAL FUNGI THIRD EDITION (revised November 2016) SARAH KIDD1,3, CATRIONA HALLIDAY2, HELEN ALEXIOU1 and DAVID ELLIS1,3 1NaTIONal MycOlOgy REfERENcE cENTRE Sa PaTHOlOgy, aDElaIDE, SOUTH aUSTRalIa 2clINIcal MycOlOgy REfERENcE labORatory cENTRE fOR INfEcTIOUS DISEaSES aND MIcRObIOlOgy labORatory SERvIcES, PaTHOlOgy WEST, IcPMR, WESTMEaD HOSPITal, WESTMEaD, NEW SOUTH WalES 3 DEPaRTMENT Of MOlEcUlaR & cEllUlaR bIOlOgy ScHOOl Of bIOlOgIcal ScIENcES UNIvERSITy Of aDElaIDE, aDElaIDE aUSTRalIa 2016 We thank Pfizera ustralia for an unrestricted educational grant to the australian and New Zealand Mycology Interest group to cover the cost of the printing. Published by the authors contact: Dr. Sarah E. Kidd Head, National Mycology Reference centre Microbiology & Infectious Diseases Sa Pathology frome Rd, adelaide, Sa 5000 Email: [email protected] Phone: (08) 8222 3571 fax: (08) 8222 3543 www.mycology.adelaide.edu.au © copyright 2016 The National Library of Australia Cataloguing-in-Publication entry: creator: Kidd, Sarah, author. Title: Descriptions of medical fungi / Sarah Kidd, catriona Halliday, Helen alexiou, David Ellis. Edition: Third edition. ISbN: 9780646951294 (paperback). Notes: Includes bibliographical references and index. Subjects: fungi--Indexes. Mycology--Indexes. Other creators/contributors: Halliday, catriona l., author. Alexiou, Helen, author. Ellis, David (David H.), author. Dewey Number: 579.5 Printed in adelaide by Newstyle Printing 41 Manchester Street Mile End, South australia 5031 front cover: Cryptococcus neoformans, and montages including Syncephalastrum, Scedosporium, Aspergillus, Rhizopus, Microsporum, Purpureocillium, Paecilomyces and Trichophyton. back cover: the colours of Trichophyton spp. Descriptions of Medical Fungi iii PREFACE The first edition of this book entitled Descriptions of Medical QaP fungi was published in 1992 by David Ellis, Steve Davis, Helen alexiou, Tania Pfeiffer and Zabeta Manatakis. -
Updates on the Taxonomy of Mucorales with an Emphasis on Clinically Important Taxa
Journal of Fungi Review Updates on the Taxonomy of Mucorales with an Emphasis on Clinically Important Taxa Grit Walther 1,*, Lysett Wagner 1 and Oliver Kurzai 1,2 1 German National Reference Center for Invasive Fungal Infections, Leibniz Institute for Natural Product Research and Infection Biology – Hans Knöll Institute, 07745 Jena, Germany; [email protected] (L.W.); [email protected] (O.K.) 2 Institute for Hygiene and Microbiology, University of Würzburg, 97080 Würzburg, Germany * Correspondence: [email protected]; Tel.: +49-3641-5321038 Received: 17 September 2019; Accepted: 11 November 2019; Published: 14 November 2019 Abstract: Fungi of the order Mucorales colonize all kinds of wet, organic materials and represent a permanent part of the human environment. They are economically important as fermenting agents of soybean products and producers of enzymes, but also as plant parasites and spoilage organisms. Several taxa cause life-threatening infections, predominantly in patients with impaired immunity. The order Mucorales has now been assigned to the phylum Mucoromycota and is comprised of 261 species in 55 genera. Of these accepted species, 38 have been reported to cause infections in humans, as a clinical entity known as mucormycosis. Due to molecular phylogenetic studies, the taxonomy of the order has changed widely during the last years. Characteristics such as homothallism, the shape of the suspensors, or the formation of sporangiola are shown to be not taxonomically relevant. Several genera including Absidia, Backusella, Circinella, Mucor, and Rhizomucor have been amended and their revisions are summarized in this review. Medically important species that have been affected by recent changes include Lichtheimia corymbifera, Mucor circinelloides, and Rhizopus microsporus. -
Medical Mycology - Stephen Davis
BIOTECHNOLOGY - Vol .XI - Medical Mycology - Stephen Davis MEDICAL MYCOLOGY Stephen Davis Mycology Unit, S. A. Pathology, Women’s and Children’s Hospital Campus, Adelaide, South Australia Keywords: Yeast, mould, fungi, teleomorph, anamorph, Basidiomycetes, Zygomycetes, Ascomycetes, deuteromycetes, Blastomycetes, Coelomycetes, Hyphomycetes, Tinea, Thrush, Aspergillosis, Cryptococcosis, Candidiasis, Histoplasmosis, Blastomycosis, Coccidiomycosis Contents 1. Introduction 2. Classes of fungi that are of Medical Interest 3. Clinical groupings of fungal infections 4. Subcutaneous infections 5. Systemic infections 6. Miscellaneous fungal or fungal-like diseases 7. Antifungal Therapy 8. Identification of fungi- The Classical Approach to Fungal Identification 9. Serological testing Glossary Bibliography Biographical Sketch Summary In conclusion, Medical Mycology is a science that has increased in importance over the years. This is due mainly to an increase in the medical use of immunosuppressive drugs which in turn has led to an increase in the incidence of opportunistic fungal infection. Thus the focus of Medical Mycology has shifted from a science that deals almost exclusively with medical dermatological conditions to one that also deals with systemic diseases leading to life or death situations. However, since it has been estimated by Professor JohnUNESCO Rippon (an eminent American – EOLSSMycologist who wrote the original ‘Medical Mycology’) that 70% of the world’s population will have some sort of tinea during the course of their lives, the relevance of Medical Mycology to most people is not to be underestimated. SAMPLE CHAPTERS 1. Introduction In simple terms, Medical Mycology is the study of fungi that impact on human health in some way. Surprisingly to many people, the causative relationship of fungi to human health was known before the pioneering work of Pasteur and Koch with pathogenic bacteria. -
Kmucormicosys Due to Saksenaea Vasiformis in a Dog ⁎ MARK Francisco J
Medical Mycology Case Reports 16 (2017) 4–7 Contents lists available at ScienceDirect Medical Mycology Case Reports journal homepage: www.elsevier.com/locate/mmcr kMucormicosys due to Saksenaea vasiformis in a dog ⁎ MARK Francisco J. Reynaldia,b, , Gabriela Giacobonic, Susana B. Córdobab,d, Julián Romeroe, Enso H. Reinosob, Ruben Abrantesd a CCT-CONICET La Plata, Buenos Aires, La Plata 1900, Argentina b Universidad Nacional de La Plata, Facultad de Ciencias Veterinarias, Cátedra de Micología Médica e Industrial, La Plata 1900, Argentina c Universidad Nacional de La Plata, Facultad de Ciencias Veterinarias, Departamento de Microbiologia, La Plata 1900, Argentina d Instituto Nacional de Enfermedades Infecciosas-ANLIS, “Dr. C. G. Malbrán”, Departamento Micología, Caba 1281, Argentina e Universidad Nacional de La Plata, Facultad de Ciencias Veterinarias, La Plata 1900, Argentina ARTICLE INFO ABSTRACT Keywords: A 2-year-old female Border collie was examined for dermatitis with a partial alopecic zone around her left front Dermatitis member. Six months later the lesion became swollen, alopecic with ulcerated areas. Microscopy analysis of Dog samples showed numerous non-septate, branching, thin-walled and irregular shaped hyphal elements. Fungal Immunocompetent cultures and molecular studies identified Saksenaea vasiformis. Treatments with griseofulvin, itraconazole and Mucormycosis surgical debridement were used, however, fourteen months later the dog was euthanatized because of the Saksenaea vasiformis unfavorable clinical outcome. 1. Introduction ted in USA. One of them was a pregnant 14-year-old killer whale that presented elevated total white blood cells and neutrophilia. Eleven days Mucormycosis is an uncommon fungal infection caused by fungi of after those signs, the whale began to exhibit lethargy and slight the subphylum Mucormicotina, order Mucorales [1].