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The Coral Trait Database, a Curated Database of Trait Information for Coral Species from the Global Oceans
www.nature.com/scientificdata OPEN The Coral Trait Database, a curated SUBJECT CATEGORIES » Community ecology database of trait information for » Marine biology » Biodiversity coral species from the global oceans » Biogeography 1 2 3 2 4 Joshua S. Madin , Kristen D. Anderson , Magnus Heide Andreasen , Tom C.L. Bridge , , » Coral reefs 5 2 6 7 1 1 Stephen D. Cairns , Sean R. Connolly , , Emily S. Darling , Marcela Diaz , Daniel S. Falster , 8 8 2 6 9 3 Erik C. Franklin , Ruth D. Gates , Mia O. Hoogenboom , , Danwei Huang , Sally A. Keith , 1 2 2 4 10 Matthew A. Kosnik , Chao-Yang Kuo , Janice M. Lough , , Catherine E. Lovelock , 1 1 1 11 12 13 Osmar Luiz , Julieta Martinelli , Toni Mizerek , John M. Pandolfi , Xavier Pochon , , 2 8 2 14 Morgan S. Pratchett , Hollie M. Putnam , T. Edward Roberts , Michael Stat , 15 16 2 Carden C. Wallace , Elizabeth Widman & Andrew H. Baird Received: 06 October 2015 28 2016 Accepted: January Trait-based approaches advance ecological and evolutionary research because traits provide a strong link to Published: 29 March 2016 an organism’s function and fitness. Trait-based research might lead to a deeper understanding of the functions of, and services provided by, ecosystems, thereby improving management, which is vital in the current era of rapid environmental change. Coral reef scientists have long collected trait data for corals; however, these are difficult to access and often under-utilized in addressing large-scale questions. We present the Coral Trait Database initiative that aims to bring together physiological, morphological, ecological, phylogenetic and biogeographic trait information into a single repository. -
The Global Body Size Biomass Spectrum Is Multimodal
Supplementary Information for The Global Body Size Biomass Spectrum is Multimodal Edward W. Tekwa, Katrina A. Catalano, Anna L. Bazzicalupo, Malin L. Pinsky Edward W. Tekwa Email: [email protected] This PDF file includes: SI Text Figures S1 to S2 Tables S1 to S8 SI References 1 Supplementary Information Text Statistical Evaluation of Allometric Trends and Multimodality. Statistical evaluations of the size- biomass relationship were performed among different classifications of organisms depending on ecological realms (marine, terrestrial, subterranean) and trophic levels (producer, consumer). The six classes are: all, terrestrial, marine, terrestrial and marine, producers, and consumers. To fit statistical relationships between size and biomass, we did not perform simple hypothesis tests directly on the best estimated spectra because 1) biomass datapoints are not independent across sizes within groups, and 2) the cross-taxa biomass at any size depends on all groups, making the error structure correlated across the size range. To obtain confidence bounds, we rely on a parametric bootstrapped ensemble of possible spectra. For each bootstrap, the possible continuous spectrum is sampled once per log size bin from -18 to 11, for a sample size of 30. This is a lower resolution than used for graphical purposes; here, 30 is likely a conservative estimate of the number of independent datapoints that contribute to the cross-taxa spectrum in any trophic or habitat class. We then performed statistical regressions on 200 bootstrap sampled sets, each obtained by independently sampling from the biomass error distribution of each group and summing by size. We then found the 2.5th and 97.5th percentiles of the outputs as each regression model’s 95% confidence bounds. -
Sexual Reproduction of the Solitary Sunset Cup Coral Leptopsammia Pruvoti (Scleractinia: Dendrophylliidae) in the Mediterranean
Marine Biology (2005) 147: 485–495 DOI 10.1007/s00227-005-1567-z RESEARCH ARTICLE S. Goffredo Æ J. Radetic´Æ V. Airi Æ F. Zaccanti Sexual reproduction of the solitary sunset cup coral Leptopsammia pruvoti (Scleractinia: Dendrophylliidae) in the Mediterranean. 1. Morphological aspects of gametogenesis and ontogenesis Received: 16 July 2004 / Accepted: 18 December 2004 / Published online: 3 March 2005 Ó Springer-Verlag 2005 Abstract Information on the reproduction in scleractin- came indented, assuming a sickle or dome shape. We can ian solitary corals and in those living in temperate zones hypothesize that the nucleus’ migration and change of is notably scant. Leptopsammia pruvoti is a solitary coral shape may have to do with facilitating fertilization and living in the Mediterranean Sea and along Atlantic determining the future embryonic axis. During oogene- coasts from Portugal to southern England. This coral sis, oocyte diameter increased from a minimum of 20 lm lives in shaded habitats, from the surface to 70 m in during the immature stage to a maximum of 680 lm depth, reaching population densities of >17,000 indi- when mature. Embryogenesis took place in the coelen- viduals mÀ2. In this paper, we discuss the morphological teron. We did not see any evidence that even hinted at aspects of sexual reproduction in this species. In a sep- the formation of a blastocoel; embryonic development arate paper, we report the quantitative data on the an- proceeded via stereoblastulae with superficial cleavage. nual reproductive cycle and make an interspecific Gastrulation took place by delamination. Early and late comparison of reproductive traits among Dend- embryos had diameters of 204–724 lm and 290–736 lm, rophylliidae aimed at defining different reproductive respectively. -
Volume 2. Animals
AC20 Doc. 8.5 Annex (English only/Seulement en anglais/Únicamente en inglés) REVIEW OF SIGNIFICANT TRADE ANALYSIS OF TRADE TRENDS WITH NOTES ON THE CONSERVATION STATUS OF SELECTED SPECIES Volume 2. Animals Prepared for the CITES Animals Committee, CITES Secretariat by the United Nations Environment Programme World Conservation Monitoring Centre JANUARY 2004 AC20 Doc. 8.5 – p. 3 Prepared and produced by: UNEP World Conservation Monitoring Centre, Cambridge, UK UNEP WORLD CONSERVATION MONITORING CENTRE (UNEP-WCMC) www.unep-wcmc.org The UNEP World Conservation Monitoring Centre is the biodiversity assessment and policy implementation arm of the United Nations Environment Programme, the world’s foremost intergovernmental environmental organisation. UNEP-WCMC aims to help decision-makers recognise the value of biodiversity to people everywhere, and to apply this knowledge to all that they do. The Centre’s challenge is to transform complex data into policy-relevant information, to build tools and systems for analysis and integration, and to support the needs of nations and the international community as they engage in joint programmes of action. UNEP-WCMC provides objective, scientifically rigorous products and services that include ecosystem assessments, support for implementation of environmental agreements, regional and global biodiversity information, research on threats and impacts, and development of future scenarios for the living world. Prepared for: The CITES Secretariat, Geneva A contribution to UNEP - The United Nations Environment Programme Printed by: UNEP World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge CB3 0DL, UK © Copyright: UNEP World Conservation Monitoring Centre/CITES Secretariat The contents of this report do not necessarily reflect the views or policies of UNEP or contributory organisations. -
Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea
Anim. Syst. Evol. Divers. Vol. 32, No. 1: 38-43, January 2016 http://dx.doi.org/10.5635/ASED.2016.32.1.038 Short communication A New Record of Dendrophyllia compressa (Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea Eunae Choi, Jun-Im Song* College of Natural Sciences, Ewha Womans University, Seoul 03760, Korea ABSTRACT Dendrophyllia compressa Ogawa and Takahashi, 1995 is newly reported from Korea. The specimen was collected off Seogwipo, Jeju-do, Korea in 1969. It is described herein based on the morphological characters of the skeletal structures. Dendrophyllia compressa is characterized by its small and bushy growth form with branches, vertical growth direction, small calicular diameter, compressed calice, Pourtalès Plan with vertical septal inner edges, flat and spongy columella, exserted septal upper margins, and epitheca. Dendrophyllia compressa has been synonymized with Cladopsammia eguchii (Wells, 1982). However, the former species differs from the latter species in its growth form, growth direction, colony size, corallite size, and corallite shape. Keywords: Anthozoa, Scleractinia, Dendrophylliidae, Dendrophyllia, Korea INTRODUCTION cribed. The specimen was collected from the subtidal zone off The family Dendrophylliidae Gray, 1847 comprises 167 Seogwipo, Jeju-do, Korea in 1969. It was dissolved in sod- species in 21 genera (Cairns, 2001; Roberts et al., 2009; ium hypochlorite solution diluted with distilled water for World Register of Marine Species, 2015). Among these 24 hours to remove all the soft tissues, washed in distilled species, 29 species in the genus Dendrophyllia have been water, and dried for the examination of the skeletal struc- reported worldwide (Roberts et al., 2009; World Register of tures. The external growth forms and shapes of the coralla Marine Species, 2015). -
Ecs2.2942 Publication Date 2019 Document Version Final Published Version Published in Ecosphere License CC by Link to Publication
UvA-DARE (Digital Academic Repository) The rise of a native sun coral species on southern Caribbean coral reefs Hoeksema, B.W.; Hiemstra, A.-F.; Vermeij, M.J.A. DOI 10.1002/ecs2.2942 Publication date 2019 Document Version Final published version Published in Ecosphere License CC BY Link to publication Citation for published version (APA): Hoeksema, B. W., Hiemstra, A-F., & Vermeij, M. J. A. (2019). The rise of a native sun coral species on southern Caribbean coral reefs. Ecosphere, 10(11), [e02942]. https://doi.org/10.1002/ecs2.2942 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:24 Sep 2021 ECOSPHERE NATURALIST The rise of a native sun coral species on southern Caribbean coral reefs 1,2,3, 1,3 4,5 BERT W. -
Structure of Mediterranean 'Cnidarian Populations In
Homage to Ramon Marga/et,· or, Why there is such p/easure in studying nature 243 (J. D. Ros & N. Prat, eds.). 1991 . Oec% gia aquatica, 10: 243-254 STRUCTURE OF 'CNIDARIAN POPULATIONS IN MEDITERRANEAN SUBLITTORAL BENTHIC COMMUNITIES AS A RESUL T OF ADAPTATION TO DIFFERENT ENVIRONMENTAL CONDITIONS 2 JOSEP-MARIA GILIl & ENRIe BALLESTEROs .• 1 Insti t de Ciencies del Mar (CSIC). Passeig Nacional, s/n. 08039 Barcelona. Spain 2 � Centre d'Estudis Avanc;:atsde Blanes (CSIC). Camí de Santa Barbara, s/n. 17300 Blanes. Spain Received: March 1990 SUMMARY The presence and abundance of Cnidarians, extremely cornmon in Mediterranean sublittoral benthic communities, exerts a profound effect on the entire structure of such communities, although the roles of Anthozoans and Hydrozoans differ in accordance with their different biological characteristics. Structural differences in benthic cnidarian populations were observed in three sublittoral cornmunities located within 100 m of each other yet differing considerably in light intensity and water movement. Species-area and Shannon's diversity-area curves were computed for each community from reticulate samples constituted by 18 subsamples 2 of 289 cm . Species-area curves were fitted to semilogarithmic functions, while diversity-area curves were fitted to Michaelis-Menten functions by the method of least squares. Species richness, species distribution, alpha-diversity, and pattem diversity were estimated from the fitted curves. Patch size for Anthozoans was smaller than that for Hydrozoans in all three communities. Diversity was greatest in the cornmunities with the lowest and with the highest light intensity and water flow levels, but species richness was highest in the intermediate community. -
The Reproductive Biology of the Scleractinian Coral Plesiastrea Versipora in Sydney Harbour, Australia
Vol. 1: 25–33, 2014 SEXUALITY AND EARLY DEVELOPMENT IN AQUATIC ORGANISMS Published online February 6 doi: 10.3354/sedao00004 Sex Early Dev Aquat Org OPEN ACCESS The reproductive biology of the scleractinian coral Plesiastrea versipora in Sydney Harbour, Australia Alisha Madsen1, Joshua S. Madin1, Chung-Hong Tan2, Andrew H. Baird2,* 1Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia 2ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811, Australia ABSTRACT: The scleractinian coral Plesiastrea versipora occurs throughout most of the Indo- Pacific; however, the species is only abundant in temperate regions, including Sydney Harbour, in New South Wales, Australia, where it can be the dominant sessile organism over small spatial scales. Population genetics indicates that the Sydney Harbour population is highly isolated, sug- gesting long-term persistence will depend upon on the local production of recruits. To determine the potential role of sexual reproduction in population persistence, we examined a number of fea- tures of the reproductive biology of P. versipora for the first time, including the sexual system, the length of the gametogenetic cycles and size-specific fecundity. P. versipora was gonochoric, sup- porting recent molecular work removing the species from the Family Merulinidae, in which the species are exclusively hermaphroditic. The oogenic cycle was between 13 and 14 mo and the spermatogenetic cycle between 7 and 8 mo, with broadcast spawning inferred to occur in either January or February. Colony sex was strongly influenced by colony size: the probability of being male increased with colony area. The longer oogenic cycle suggests that females are investing energy in reproduction rather than growth, and consequently, males are on average larger for a given age. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
Transcriptional Response of the Heat Shock Gene Hsp70 Aligns with Differences in Stress Susceptibility of Shallow-Water Corals from the T Mediterranean Sea
Marine Environmental Research 140 (2018) 444–454 Contents lists available at ScienceDirect Marine Environmental Research journal homepage: www.elsevier.com/locate/marenvrev Transcriptional response of the heat shock gene hsp70 aligns with differences in stress susceptibility of shallow-water corals from the T Mediterranean Sea ∗ Silvia Franzellittia, ,1, Valentina Airib,1, Diana Calbuccia, Erik Carosellib, Fiorella Pradab, Christian R. Voolstrac, Tali Massd, Giuseppe Falinie, Elena Fabbria, Stefano Goffredob a Animal and Environmental Physiology Laboratory, Department of Biological, Geological and Environmental Sciences, University of Bologna, via S. Alberto 163, I-48123, Ravenna, Italy b Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, I-40126, Bologna, Italy c Red Sea Research Center, Division of Biological and Environmental Science and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia d Department of Marine Biology, The Leon H. Charney School of Marine Sciences, University of Haifa, Multi Purpose Boulevard, Mt. Carmel, Haifa, 3498838, Israel e Department of Chemistry “Giacomo Ciamician”, University of Bologna, via F. Selmi 2, I-40126, Bologna, Italy ARTICLE INFO ABSTRACT Keywords: Shallow-water corals of the Mediterranean Sea are facing a dramatic increase in water temperature due to Thermal stress climate change, predicted to increase the frequency of bleaching and mass mortality events. However, suppo- Coral sedly not all corals are affected equally, as they show differences in stress susceptibility, as suggested by phy- Gene expression siological outputs of corals along temperature gradients and under controlled conditions in terms of reproduc- Heat shock protein tion, demography, growth, calcification, and photosynthetic efficiency. -
Four New Records of Two Genera Balanophyllia and Cladopsammia (Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea
Anim. Syst. Evol. Divers. Vol. 30, No. 3: 183-190, July 2014 http://dx.doi.org/10.5635/ASED.2014.30.3.183 Short communication Four New Records of Two Genera Balanophyllia and Cladopsammia (Anthozoa: Hexacorallia: Scleractinia: Dendrophylliidae) from Korea Eunae Choi, Jun-Im Song* Division of EcoScience, Ewha Womans University, Seoul 120-750, Korea ABSTRACT The four species of the family Dendrophylliidae are newly recorded in Korea: Balanophyllia (Balanophyllia) cumingii Milne Edwards and Haime, 1848, Balanophyllia (Balanophyllia) vanderhorsti Cairns, 2001, Cladopsammia eguchii (Wells, 1982), and Cladopsammia gracilis (Milne Edwards and Haime, 1848). The two genera of Balanophyllia and Cladopsammia, to which the four species belong, are newly recorded in Korea. They were collected from the subtidal zones in Jeju-do Island, Korea by SCUBA diving from 1987 to 2012. This study aims to identify the four dendrophyllid species based on external and internal morphological characters including growth form, size, budding, and color of colonies, shape and size of corallites, columella, theca, and septa. Balanophyllia (Balanophyllia) cumingii is distinguished by its solitary growth form, small and low subturbinate corallite with enlarged calice, and expanded basal part, exsert first and second septa, and Pourtalès plan. Balanophyllia (Balanophyllia) vanderhorsti is characterized by its quasi-colonial growth form, subturbinate corallites with compressed calice, thick theca, and Pourtalès plan. Cladopsammia eguchii is characterized by its phaceloid growth form of compressed corallites basally united with common coenosteum, flat spongy columella, thick theca, and Pourtalès plan. Cladopsammia gracilis is distinguished by its phaceloid growth form of corallites basally united with common coenosteum, and pronounced Pourtalès plan forming flower patterns. -
(Adriatic Sea, Croatia). 1
NAT. CROAT. VOL. 11 No 3 265¿292 ZAGREB September 30, 2002 ISSN 1330-0520 original scientific paper / izvorni znanstveni rad UDK 591.9:593.6(497.5/(262.3)(1–13) MARINE FAUNA OF THE MLJET NATIONAL PARK (ADRIATIC SEA, CROATIA). 1. ANTHOZOA PETAR KRU@I] Faculty of Science, Department of Zoology, Rooseveltov trg 6, 10000 Zagreb, Croatia ([email protected]) Thais – Society for Exploration and Conservation of Nature, Primorska 23, 10000 Zagreb, Croatia Kru`i}, P.: Marine fauna of the Mljet National Park (Adriatic Sea, Croatia). 1. Anthozoa. Nat. Croat., Vol. 11, No. 3., 265–292, 2002, Zagreb. Fifty-two anthozoan species were recorded and collected in the area of Mljet National Park dur- ing surveys from 1995 to 1998. General and ecological data are presented for each species, as well as distribution and local abundance. Recorded species account for about 60% of anthozoans known in the Adriatic Sea, and for about 45% of anthozoans known in the Mediterranean Sea. Eight of these species were not recorded previously in the Adriatic Sea. Eleven species are considered to be Mediterranean endemics. The heterogeneity of substrates and benthic communities is considerable in the Mljet National Park, with anthozoans present on most different kinds of substrates and in a wide range of benthic communities. Remarkably, the colonial coral Cladocora caespitosa builds a large »reef-like« structure in the Veliko Jezero, in the area characterized by strong bottom hydro- dynamism. Key words: marine fauna, Anthozoa, Mljet, Adriatic Sea Kru`i}, P.: Morska fauna Nacionalnog parka Mljet (Jadransko more, Hrvatska). 1.