The Golden Spiral: the Genesis of a Misunderstanding
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On Genes and Form Enrico Coen*, Richard Kennaway and Christopher Whitewoods
© 2017. Published by The Company of Biologists Ltd | Development (2017) 144, 4203-4213 doi:10.1242/dev.151910 REVIEW On genes and form Enrico Coen*, Richard Kennaway and Christopher Whitewoods ABSTRACT aside ‘not because I doubt for a moment the facts nor dispute the The mechanisms by which organisms acquire their sizes and shapes hypotheses nor decry the importance of one or other; but because we through growth was a major focus of D’Arcy Thompson’s book are so much in the dark as to the mysterious field of force in which the On Growth and Form. By applying mathematical and physical chromosomes lie, far from the visible horizon of physical science, principles to a range of biological forms, Thompson achieved fresh that the matter lies (for the present) beyond the range of problems ’ insights, such as the notion that diverse biological shapes could be which this book professes to discuss (p. 341, Thompson, 1942). related through simple deformations of a coordinate system. However, Much of the darkness and mystery Thompson refers to was lifted in Thompson considered genetics to lie outside the scope of his work, the second half of the 20th century, as the nature of genes and their even though genetics was a growing discipline at the time the mechanisms of action became clear. Nevertheless, the link between book was published. Here, we review how recent advances in cell, gene activity and the generation of form remained obscure, largely developmental, evolutionary and computational biology allow because of difficulties in determining growth patterns and relating Thompson’s ideas to be integrated with genes and the processes them to physico-chemical mechanisms. -
Linguistic Presentation of Objects
Zygmunt Ryznar dr emeritus Cracow Poland [email protected] Linguistic presentation of objects (types,structures,relations) Abstract Paper presents phrases for object specification in terms of structure, relations and dynamics. An applied notation provides a very concise (less words more contents) description of object. Keywords object relations, role, object type, object dynamics, geometric presentation Introduction This paper is based on OSL (Object Specification Language) [3] dedicated to present the various structures of objects, their relations and dynamics (events, actions and processes). Jay W.Forrester author of fundamental work "Industrial Dynamics”[4] considers the importance of relations: “the structure of interconnections and the interactions are often far more important than the parts of system”. Notation <!...> comment < > container of (phrase,name...) ≡> link to something external (outside of definition)) <def > </def> start-end of definition <spec> </spec> start-end of specification <beg> <end> start-end of section [..] or {..} 1 list of assigned keywords :[ or :{ structure ^<name> optional item (..) list of items xxxx(..) name of list = value assignment @ mark of special attribute,feature,property @dark unknown, to obtain, to discover :: belongs to : equivalent name (e.g.shortname) # number of |name| executive/operational object ppppXxxx name of item Xxxx with prefix ‘pppp ‘ XXXX basic object UUUU.xxxx xxxx object belonged to UUUU object class & / conjunctions ‘and’ ‘or’ 1 If using Latex editor we suggest [..] brackets -
Claus Kahlert and Otto E. Rössler Institute for Physical and Theoretical Chemistry, University of Tübingen Z. Naturforsch
Chaos as a Limit in a Boundary Value Problem Claus Kahlert and Otto E. Rössler Institute for Physical and Theoretical Chemistry, University of Tübingen Z. Naturforsch. 39a, 1200- 1203 (1984); received November 8, 1984 A piecewise-linear. 3-variable autonomous O.D.E. of C° type, known to describe constant- shape travelling waves in one-dimensional reaction-diffusion media of Rinzel-Keller type, is numerically shown to possess a chaotic attractor in state space. An analytical method proving the possibility of chaos is outlined and a set of parameters yielding Shil'nikov chaos indicated. A symbolic dynamics technique can be used to show how the limiting chaos dominates the behavior even of the finite boundary value problem. Reaction-diffusion equations occur in many dis boundary conditions are assumed. This result was ciplines [1, 2], Piecewise-linear systems are especially obtained by an analytical matching method. The amenable to analysis. A variant to the Rinzel-Keller connection to chaos theory (Smale [6] basic sets) equation of nerve conduction [3] can be written as was not evident at the time. In the following, even the possibility of manifest chaos will be demon 9 ö2 — u u + p [- u + r - ß + e (ii - Ö)], strated. o t oa~ In Fig. 1, a chaotic attractor of (2) is presented. Ö The flow can be classified as an example of "screw- — r = - e u + r , (1) 0/ type-chaos" (cf. [7]). A second example of a chaotic attractor is shown in Fig. 2. A 1-D projection of a where 0(a) =1 if a > 0 and zero otherwise; d is the 2-D cross section through the chaotic flow in a threshold parameter. -
John Wells: Centenary Display Jonty Lees: Artist in Residence Autumn 2005 Winter 2007 6 October 2007 – 13 January 2008
Kenneth Martin & Mary Martin: Constructed Works John Wells: Centenary Display Jonty Lees: Artist in Residence Autumn 2005 Winter 2007 6 October 2007 – 13 January 2008 Notes for Teachers - 1 - Contents Introduction 3 Kenneth Martin & Marty Martin: Constructed Works 4 John Wells: Centenary Display 11 Jonty Lees: Artist in Residence 14 Bernard Leach and his Circle 17 Ways of Looking – Questions to Ask of Any Artwork 19 Suggested Activities 20 Tate Resources & Contacts 22 Further Reading 22 Key Art Terms 24 - 2 - Introduction The Winter 2007 displays present: Kenneth Martin and Mary Martin: Constructed Works (Gallery 1, 3, 4, and the Apse) This exhibition shows the work of two of Britain’s key post-war abstract artists, Kenneth Martin and Mary Martin. The exhibition includes nearly 50 works and focuses on Kenneth Martin’s mobiles and his later Chance and Order series of abstract paintings, alongside Mary Martin’s relief sculptures. Modernism and St Ives from 1940 (Lower Gallery 2) This display of artists associated with St Ives from the Tate Collection is designed to complement the Kenneth Martin and Mary Martin exhibition. It includes work by Mary Martin, Victor Pasmore, Anthony Hill and Adrian Heath alongside St Ives artists such as Peter Lanyon, Terry Frost and Ben Nicholson. John Wells: Centenary Display (The Studio) A small display of paintings and relief constructions by John Wells, designed to celebrate the centenary of his birth. Bernard Leach and his Circle (Upper Gallery 2) Ceramics by Bernard Leach and key studio potters who worked alongside him. These works form part of the Wingfield-Digby Collection, recently gifted to Tate St Ives. -
IV. on Growth and Form and D'arcy Wenworth Thompson
Modified 4th chapter from the novel „Problem promatrača“ („Problem of the observer“), by Antonio Šiber, Jesenski i Turk (2008). Uploaded on the author website, http://asiber.ifs.hr IV. On growth and form and D'Arcy Wenworth Thompson St. Andrews on the North Sea is a cursed town for me. In a winter afternoon in year 1941, a bearded, grey-haired eighty year old man with swollen eyes and big head covered by even bigger hat was descending down the hill side to the harbor. He had a huge butcher’s knife in his hand. A few workers that gathered around a carcass of a huge whale which the North Sea washed on the docks visibly retreated away from a disturbing scene of a tall and hairy figure with an impressive knife. The beardo approached the whale carcass and in less than a minute swiftly separated a thick layer of underskin fat, and then also several large pieces of meat. He carefully stored them in a linen bag that he threw over the shoulder and slowly started his return, uphill. The astonished workers watched the whole procedure almost breathlessly, and then it finally occurred to one of them who was looking in the back of a slowly distancing old man that it was not such a bad idea. It is a war time and shortage of meat. And if professor of natural philosophy Sir D’Arcy Thompson concluded that the fish is edible… Who would know better than him? After all, he thinks only of animals and plants. Of course, Thomson knew perfectly well that the whale is not fish, but to workers this was of not much importance. -
Perspectives
PERspECTIVES steady-state spatial patterns could also arise TIMELINE from such processes in living systems21. The full formalization of the nature of Self-organization in cell biology: self-organization processes came from the work of Prigogine on instabilities and the a brief history emergence of organization in ‘dissipative systems’ in the 1960s22–24, and from Haken who worked on similar issues under the Eric Karsenti name of synergetics11 (TIMELINE). Abstract | Over the past two decades, molecular and cell biologists have made It was clear from the outset that the emergence of dynamical organization important progress in characterizing the components and compartments of the observed in physical and chemical systems cell. New visualization methods have also revealed cellular dynamics. This has should be of importance to biology, and raised complex issues about the organization principles that underlie the scientists who are interested in the periodic emergence of coherent dynamical cell shapes and functions. Self-organization manifestations of life and developmental concepts that were first developed in chemistry and physics and then applied to biology have been actively working in this field19,25–29. From a more general point various morphogenetic problems in biology over the past century are now of view, Kauffman built on the ideas of beginning to be applied to the organization of the living cell. Prigogine and Haken in an attempt to explain the origin of order in biology30–32. One of the most fundamental problems in this complex state of living matter as a self- Self-organization was also invoked to biology concerns the origin of forms and organized end8–10. -
Study of Spiral Transition Curves As Related to the Visual Quality of Highway Alignment
A STUDY OF SPIRAL TRANSITION CURVES AS RELA'^^ED TO THE VISUAL QUALITY OF HIGHWAY ALIGNMENT JERRY SHELDON MURPHY B, S., Kansas State University, 1968 A MJvSTER'S THESIS submitted in partial fulfillment of the requirements for the degree MASTER OF SCIENCE Department of Civil Engineering KANSAS STATE UNIVERSITY Manhattan, Kansas 1969 Approved by P^ajQT Professor TV- / / ^ / TABLE OF CONTENTS <2, 2^ INTRODUCTION 1 LITERATURE SEARCH 3 PURPOSE 5 SCOPE 6 • METHOD OF SOLUTION 7 RESULTS 18 RECOMMENDATIONS FOR FURTHER RESEARCH 27 CONCLUSION 33 REFERENCES 34 APPENDIX 36 LIST OF TABLES TABLE 1, Geonetry of Locations Studied 17 TABLE 2, Rates of Change of Slope Versus Curve Ratings 31 LIST OF FIGURES FIGURE 1. Definition of Sight Distance and Display Angle 8 FIGURE 2. Perspective Coordinate Transformation 9 FIGURE 3. Spiral Curve Calculation Equations 12 FIGURE 4. Flow Chart 14 FIGURE 5, Photograph and Perspective of Selected Location 15 FIGURE 6. Effect of Spiral Curves at Small Display Angles 19 A, No Spiral (Circular Curve) B, Completely Spiralized FIGURE 7. Effects of Spiral Curves (DA = .015 Radians, SD = 1000 Feet, D = l** and A = 10*) 20 Plate 1 A. No Spiral (Circular Curve) B, Spiral Length = 250 Feet FIGURE 8. Effects of Spiral Curves (DA = ,015 Radians, SD = 1000 Feet, D = 1° and A = 10°) 21 Plate 2 A. Spiral Length = 500 Feet B. Spiral Length = 1000 Feet (Conpletely Spiralized) FIGURE 9. Effects of Display Angle (D = 2°, A = 10°, Ig = 500 feet, = SD 500 feet) 23 Plate 1 A. Display Angle = .007 Radian B. Display Angle = .027 Radiaji FIGURE 10. -
Construction Surveying Curves
Construction Surveying Curves Three(3) Continuing Education Hours Course #LS1003 Approved Continuing Education for Licensed Professional Engineers EZ-pdh.com Ezekiel Enterprises, LLC 301 Mission Dr. Unit 571 New Smyrna Beach, FL 32170 800-433-1487 [email protected] Construction Surveying Curves Ezekiel Enterprises, LLC Course Description: The Construction Surveying Curves course satisfies three (3) hours of professional development. The course is designed as a distance learning course focused on the process required for a surveyor to establish curves. Objectives: The primary objective of this course is enable the student to understand practical methods to locate points along curves using variety of methods. Grading: Students must achieve a minimum score of 70% on the online quiz to pass this course. The quiz may be taken as many times as necessary to successful pass and complete the course. Ezekiel Enterprises, LLC Section I. Simple Horizontal Curves CURVE POINTS Simple The simple curve is an arc of a circle. It is the most By studying this course the surveyor learns to locate commonly used. The radius of the circle determines points using angles and distances. In construction the “sharpness” or “flatness” of the curve. The larger surveying, the surveyor must often establish the line of the radius, the “flatter” the curve. a curve for road layout or some other construction. The surveyor can establish curves of short radius, Compound usually less than one tape length, by holding one end Surveyors often have to use a compound curve because of the tape at the center of the circle and swinging the of the terrain. -
The Ordered Distribution of Natural Numbers on the Square Root Spiral
The Ordered Distribution of Natural Numbers on the Square Root Spiral - Harry K. Hahn - Ludwig-Erhard-Str. 10 D-76275 Et Germanytlingen, Germany ------------------------------ mathematical analysis by - Kay Schoenberger - Humboldt-University Berlin ----------------------------- 20. June 2007 Abstract : Natural numbers divisible by the same prime factor lie on defined spiral graphs which are running through the “Square Root Spiral“ ( also named as “Spiral of Theodorus” or “Wurzel Spirale“ or “Einstein Spiral” ). Prime Numbers also clearly accumulate on such spiral graphs. And the square numbers 4, 9, 16, 25, 36 … form a highly three-symmetrical system of three spiral graphs, which divide the square-root-spiral into three equal areas. A mathematical analysis shows that these spiral graphs are defined by quadratic polynomials. The Square Root Spiral is a geometrical structure which is based on the three basic constants: 1, sqrt2 and π (pi) , and the continuous application of the Pythagorean Theorem of the right angled triangle. Fibonacci number sequences also play a part in the structure of the Square Root Spiral. Fibonacci Numbers divide the Square Root Spiral into areas and angle sectors with constant proportions. These proportions are linked to the “golden mean” ( golden section ), which behaves as a self-avoiding-walk- constant in the lattice-like structure of the square root spiral. Contents of the general section Page 1 Introduction to the Square Root Spiral 2 2 Mathematical description of the Square Root Spiral 4 3 The distribution -
D'arcy Wentworth Thompson
D’ARCY WENTWORTH THOMPSON Mathematically trained maverick zoologist D’Arcy Wentworth Thompson (May 2, 1860 –June 21, 1948) was among the first to cross the frontier between mathematics and the biological world and as such became the first true biomathematician. A polymath with unbounded energy, he saw mathematical patterns in everything – the mysterious spiral forms that appear in the curve of a seashell, the swirl of water boiling in a pan, the sweep of faraway nebulae, the thickness of stripes along a zebra’s flanks, the floret of a flower, etc. His premise was that “everything is the way it is because it got that way… the form of an object is a ‘diagram of forces’, in this sense, at least, that from it we can judge of or deduce the forces that are acting or have acted upon it.” He asserted that one must not merely study finished forms but also the forces that mold them. He sought to describe the mathematical origins of shapes and structures in the natural world, writing: “Cell and tissue, shell and bone, leaf and flower, are so many portions of matter and it is in obedience to the laws of physics that their particles have been moved, molded and conformed. There are no exceptions to the rule that God always geometrizes.” Thompson was born in Edinburgh, Scotland, the son of a Professor of Greek. At ten he entered Edinburgh Academy, winning prizes for Classics, Greek Testament, Mathematics and Modern Languages. At seventeen he went to the University of Edinburgh to study medicine, but two years later he won a scholarship to Trinity College, Cambridge, where he concentrated on zoology and natural science. -
Golden Ratio: a Subtle Regulator in Our Body and Cardiovascular System?
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/306051060 Golden Ratio: A subtle regulator in our body and cardiovascular system? Article in International journal of cardiology · August 2016 DOI: 10.1016/j.ijcard.2016.08.147 CITATIONS READS 8 266 3 authors, including: Selcuk Ozturk Ertan Yetkin Ankara University Istinye University, LIV Hospital 56 PUBLICATIONS 121 CITATIONS 227 PUBLICATIONS 3,259 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: microbiology View project golden ratio View project All content following this page was uploaded by Ertan Yetkin on 23 August 2019. The user has requested enhancement of the downloaded file. International Journal of Cardiology 223 (2016) 143–145 Contents lists available at ScienceDirect International Journal of Cardiology journal homepage: www.elsevier.com/locate/ijcard Review Golden ratio: A subtle regulator in our body and cardiovascular system? Selcuk Ozturk a, Kenan Yalta b, Ertan Yetkin c,⁎ a Abant Izzet Baysal University, Faculty of Medicine, Department of Cardiology, Bolu, Turkey b Trakya University, Faculty of Medicine, Department of Cardiology, Edirne, Turkey c Yenisehir Hospital, Division of Cardiology, Mersin, Turkey article info abstract Article history: Golden ratio, which is an irrational number and also named as the Greek letter Phi (φ), is defined as the ratio be- Received 13 July 2016 tween two lines of unequal length, where the ratio of the lengths of the shorter to the longer is the same as the Accepted 7 August 2016 ratio between the lengths of the longer and the sum of the lengths. -
A Method of Constructing Phyllotaxically Arranged Modular Models by Partitioning the Interior of a Cylinder Or a Cone
A method of constructing phyllotaxically arranged modular models by partitioning the interior of a cylinder or a cone Cezary St¸epie´n Institute of Computer Science, Warsaw University of Technology, Poland [email protected] Abstract. The paper describes a method of partitioning a cylinder space into three-dimensional sub- spaces, congruent to each other, as well as partitioning a cone space into subspaces similar to each other. The way of partitioning is of such a nature that the intersection of any two subspaces is the empty set. Subspaces are arranged with regard to phyllotaxis. Phyllotaxis lets us distinguish privileged directions and observe parastichies trending these directions. The subspaces are created by sweeping a changing cross-section along a given path, which enables us to obtain not only simple shapes but also complicated ones. Having created these subspaces, we can put modules inside them, which do not need to be obligatorily congruent or similar. The method ensures that any module does not intersect another one. An example of plant model is given, consisting of modules phyllotaxically arranged inside a cylinder or a cone. Key words: computer graphics; modeling; modular model; phyllotaxis; cylinder partitioning; cone partitioning; genetic helix; parastichy. 1. Introduction Phyllotaxis is the manner of how leaves are arranged on a plant stem. The regularity of leaves arrangement, known for a long time, still absorbs the attention of researchers in the fields of botany, mathematics and computer graphics. Various methods have been used to describe phyllotaxis. A historical review of problems referring to phyllotaxis is given in [7]. Its connections with number sequences, e.g.