Molecular Analysis for Azoospermia Factor Microdeletions in the Y Chromosome for Azoospermic and Severe Oligospermic Infertile Iraqi Patients

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Molecular Analysis for Azoospermia Factor Microdeletions in the Y Chromosome for Azoospermic and Severe Oligospermic Infertile Iraqi Patients Sys Rev Pharm 2020;11(8):562-570 A multifaceted review journal in the field of pharmacy Molecular Analysis for Azoospermia Factor Microdeletions in the Y chromosome for Azoospermic and Severe Oligospermic Infertile Iraqi Patients 1Mohammed. N Al-Qaisi, B.Sc., 2Mushtak. T Al-Ouqaili, Ph.D.*, 3Duraid. T Al-Hadithi, M.D. 1Ramadi Teaching Hospital for Women and Children, Al-Anbar Health Office, Ramadi, Iraq 2Department of Microbiology, College of Medicine, University of Anbar, Ramadi, Iraq 3Department of Surgery, College of Medicine, University of Anbar, Ramadi, Iraq Corresponding Author E-mail: [email protected] ABSTRACT Defined infertility as incapability of a married couple tᴏ have children for the Keywords: AZF//microdeletion, male infertility, non- one-year ᴏf unprotected intercourse. Y chromosomal microdeletions are the obstructive/azoospermia and severe oligospermia, second greatest common genetic reason of men sterility. This research aims to Y/Chromosome//microdeletions. find the prevalence of AZF Y chromosome microdeletions in azoospermic and severe oligospermia patients. Further, to evaluate the prevalence types of Correspondence: AZF/c sub-region microdeletions in patients with AZF/c deletion in Iraq. A Mushtak. T Al-Ouqaili, Ph.D total of 75 infertile Iraqi males and 25 control were included in this study. The 2Department of Microbiology, College of Medicine, University of Anbar, DNA samples were extracted, and they were analysed for AZF microdeletions Ramadi, Iraq by utilizing eight sequence-tagged sites through a q/real-time PCR system. Corresponding Author E-mail: [email protected] After that, partial AZF/c deletion sub-region was investigated using four specific primers. These markers were chosen according to the EAA/ EMGQ recommendations. Out of 75 infertile patients, 46 patients (61.33%) revealed AZF microdeletions in the Y chromosomal with at least one STS deletion for one or more AZF regions. (32.6%) of patients with microdeletions observed in three regions AZFabc. Out of 24 patients who have AZF/c microdeletions (37.5%) were exhibited b2/b4 deletion (complete AZF/c deletions), (58.3%) were showed gr/gr microdeletion (partial AZF/c deletions. and (4.1%) with b2/b4 deletion continues the terminal heterochromatin region. The incidence of classical AZF microdeletions in our study subjects is high. In our study population, gr/gr partial AZF/c microdeletions were higher than b2/b4 complete AZF/c deletion. The mean levels of sex hormones in azoospermic sterile patients with AZF microdeletion were higher than the mean of azoospermic sterile men without deletion of AZF. INTRODUCTION intracytᴏplasmic sperm injection (ICSI) assists infertile The Y chromosome in human is important for sex males with Y chromosome microdeletions to become determination and male germ cell progress and fathers, the risk of infertility that may be transmitting from maintenance[1]. The /azoospermia factor (AZF) area infertile fathers to their offspring should be a note[9]. located on the long arm of the Y chromosome Y/q and There are few data on the occurrence of testicular tumors show a main role in the genetics/of male sterility and is in males with Y q micro-deletions, especially males born to dividing into three sections: AZF a, AZF b, and AZF c. These fathers with deletion. The recent documents on the higher sections contain genes that are involved in occurrence of neurological problems in infertile males spermatogenesis and the development of tests. Their with Y/q deletions are reported[10]. failure or loss is commonly associated with AZF microdeletions are toᴏ/small to be noticed by spermatogenetic defects and male infertility. However, karyotyping. but, with the advance of molecular biology Microdeletions at AZF are the most common structural technology, now AZF microdeletions can be recognized by chromosomal defects and the leading induce of male multiplex polymerase chain reaction (PCR) technique within infertility[2]. a short time[11]. According to the European Academy of The microdeletion of AZF a results in sertoli/cell/only Andrology /European Molecular Genetics guidelines, Six syndrome, and whole removal of AZFb[3] is associating sites were selected for preliminary screening of AZF absence, with spermatogenic arrest. Also, the microdeletion of AZF including SY84/SY86 (AZFa), SY127/SY134 (AZFb), and c induces variable clinical and histologic phenotypes, SY254/SY255 (AZF c for the identification of microdeletions ranging from Sertoli. Cell. only syndrome to in the Y chromosome)[12]. oligospermia[4]. While Partial deletions of AZF/c classify as Our study has been undertaken for analyzing the 1.6Mb gr/gr, 1.8Mb b2/b3, 1.6Mb b1/b3, and 3.5Mb prevalence and types of microdeletions in the AZF region b2/b4 (complete AZF/c deletions) were also known to of a Y chromosome in patients with azoospermia and influence spermatogenesis[5]. Among these, gr/gr sub- severe oligospermia from Al-Anbar Governorate west of deletions with occurrence varying from 2.1% to 12.5% in Iraq by using six sequence-tagged sites (STSs) as follow: infertile people and zero to 10.2% infertile males are sY84 and sY86 for AZF/a; sY127 and sY134 for AZF/b; frequently reported[6]. The gr/gr deletion, the common sY254 and sY255 for AZF/c according to the partial deletion of AZF/c, deletes about half of the b2/b4 recommendations by European Academy of Andrology/ area and can be described by different phenotypes European Molecular Genetics Quality Network EAA/ depending on the ethnic and geopolitical origin[7]. EMQN. Also, to determine the types of partial AZF/c sub- AZF microdeletions are causing by mistakes in the region deletion. and to determine the association between intrachromosomal recombination route[8]. While hormonal imbalance levels in the Luteinizing hormone, 562 Systematic Reviews in Pharmacy Vol 11, Issue 8, Aug-Sep 2020 Al-Ouqaili et al. /Molecular Analysis for Azoospermia Factor Microdeletions in the Y Chromosome for Azoospermic and Severe Oligospermic Infertile Iraqi Patients Follicle stimulating hormone, Prolactin hormone in addition to testosterone, and the occurrence of Y Hormonal study chromosome microdeletions. All participants have submitted for evaluation for hormonal studies including LH, FSH and prolactin in Patients and methods addition to testosterone hormone, in human serum on Study patients and ethics approval TOSOH Automated Immunoassay System (TOSOH This study has been approved by the Medical Ethics Bioscience, Japan). Committee at the University of Anbar, College of Medicine, according to the Scientific Research Ethics Committee, Molecular part Book No. 113 validated on 4/11/2019. We have studied 75 DNA extraction Iraqi infertile patients with impairment of Genomic/DNA was extracted frᴏm 400-µL bӏood samples spermatogenesis, 40 non-obstructive azoospermia/35 with the SaMag-12Automated Nucӏeic Acids Extraction severe oligozoospermia men who have been seeking System (Sacace biotechnologies/Italy), according to the consultation for infertility at the private infertility clinics. Al-Ouqaili, and Al-Qaysi protocols respectively[14,15]. The The study included 25 Health controls with normal quantity of nucleic acid has been detected by using the spermatogenesis, and their fertility status was assumed by Quantus™ Fluorometer with QuantiFluor® dsDNA System the reports that they were fathers for a child or more. (promega/ USA) provides a fast, easy and sensitive method for determining DNA concentration. DNA purity Semen analysis was also estimated by OD260/OD280 UV Semen analysis was done accᴏrding to normal standard spectrophotometer (Unico/ USA). criteria laid down by World Health Organization[13]. The identification of azoospermia depended on the lack of Molecular investigation using qReal-Time PCR sperm in at least two separate semen analyses and after technique centrifugation. The chosen infertile males were This part was achieved using two reactions in RT-PCR categorised as azoospermic or severe oligospermic (Sacace biotechnologies, Italy). Reaction A consisted of patients with less than five million/mL of sperm count. sY86, sY127, sY254, and ZFY/X STSs, and the other Moreover, the volume of semen, the concentration of reaction, B consisted of sY84, sY134, sY255, and SRY STSs. sperms, the sperms morphology, and the movement type Hydrolysis probes within a reaction were labelled using of the sperms, whether it was progressive, sluggish or channels of FAM, HEX, ROX, and CY5, and the STSs immobile were evaluated. information were listed in the table 1. Table 1. The information about the study sequence tag site (STS) locus STS Sequence (5′to 3′) Size Base pair MIX A ZFX/Y ZFX/Y-F 5′- ACC RCT GTA CTG ACT GTG ATT ACA C-3′ 495 ZFX/Y-R 5′- GCA CYT CTT TGG TAT CYG AGA AAG T-3′ AZF a sY86-F 5′- GTG ACA CAC AGA CTA TGC TTC-3′ 318 sY86-R 5′ - ACA CAC AGA GGG ACA ACC CT - 3′ AZF b sY127-F 5′- GGC TCA CAA ACG AAA AGA AA-3′ 274 sY127-R 5′- CTG CAG GCA GTA ATA AGG GA-3′ AZF c sY254-F 5′- GGG TGT TAC CAG AAG GCA AA-3′ 380 sY254-R 5′ - GAA CCG TAT CTA CCA AAG CAG C-3′ MIX B SRY sY14-F 5′ - GAA TAT TCC CGC TCT CCG GA-3′ 472 sY14-R 5′ - GCT GGT GCT CCA TTC TTG AG-3′ AZF a sY84-F 5′- AGA AGG GTC CTG AAA GCA GGT-3′ 326 sY84-R 5′ - GCC TAC TAC CTG GAG GCT TC-3′ AZF b sY134-F 5′- GTC TGC CTC ACC ATC AAC CG-3′ 301 sY134-R 5′- ACC ACT GCC AAA ACT TTC AA-3′ AZF c sY255-F 5′- GTT ACA GGA TTC GGC GTG AT-3′ 123 sY255-R 5′- CTC GTC ATG TGC AGC CAC-3′ The whole reaction amount was 35 μӏ; the amount of DNA The screening for AZF/c sub-region microdeletions by sample was seven μӏ.
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