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(12) United States Patent (10) Patent No.: US 8,022,274 B2 Riechmann Et Al

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(12) United States Patent (10) Patent No.: US 8,022,274 B2 Riechmann Et Al US008022274B2 (12) United States Patent (10) Patent No.: US 8,022,274 B2 Riechmann et al. (45) Date of Patent: Sep. 20, 2011 (54) PLANT TOLERANCE TO LOW WATER, LOW filed on Aug. 9, 2002, now Pat. No. 7,238,860, and a NITROGEN AND COLD continuation-in-part of application No. 09/837,944, and a continuation-in-part of application No. (75) Inventors: Jose Luis Riechmann, Pasadena, CA 10/171.468, filed on Jun. 14, 2002, now abandoned, (US); Oliver J. Ratcliffe, Oakland, CA application No. 1 1/981,667, which is a (US); T. Lynne Reuber, San Mateo, CA continuation-in-part of application No. 1 1/642,814, (US); Katherine Krolikowski, filed on Dec. 20, 2006, now Pat. No. 7,825,296, which Richmond, CA (US); Jacqueline E. is a division of application No. 10/666,642, filed on Heard, Stonington, CT (US); Omaira Sep. 18, 2003, now Pat. No. 7,196,245. Pineda, Vero Beach, FL (US); (60) Provisional application No. 60/961,403, filed on Jul. Cai-Zhong Jiang, Fremont, CA (US); 20, 2007, provisional application No. 60/227,439, Robert A. Creelman, Castro Valley, CA filed on Aug. 22, 2000, provisional application No. (US); Roderick W. Kumimoto, Norman, 60/310,847, filed on Aug. 9, 2001, provisional OK (US); Paul Chomet, Groton, CT application No. 60/336,049, filed on Nov. 19, 2001, (US) provisional application No. 60/338,692, filed on Dec. 11, 2001, provisional application No. 60/101.349, (73) Assignee: Mendel Biotechnology, Inc., Hayward, filed on Sep. 22, 1998, provisional application No. CA (US) 60/465,809, filed on Apr. 24, 2003. (*) Notice: Subject to any disclaimer, the term of this (51) Int. Cl. patent is extended or adjusted under 35 AOIH 5/00 (2006.01) U.S.C. 154(b) by 0 days. AOIH 5/10 (2006.01) CI2N 5/14 (2006.01) (21) Appl. No.: 11/981,667 (52) U.S. Cl. ......................... 800/295: 800/298; 435/419 (58) Field of Classification Search ........................ None (22) Filed: Mar. 7, 2008 See application file for complete search history. (65) Prior Publication Data (56) References Cited US 2008/O1557O6A1 Jun. 26, 2008 U.S. PATENT DOCUMENTS Related U.S. Application Data 5.990,387 A * 1 1/1999 Tomes et al. .................. 800,293 6,121,513 A 9/2000 Zhang et al. (60) Continuation-in-part of application No. 1 1/479,226, 6,664,446 B2 12/2003 Heard et al. filed on Jun. 30, 2006, now Pat. No. 7,858,848, which (Continued) is a continuation-in-part of application No. 09/713,994, filed on Nov. 16, 2000, now abandoned, FOREIGN PATENT DOCUMENTS application No. 1 1/981,667, which is a EP O659766 6, 1995 continuation-in-part of application No. 1 1/728,567, filed on Mar. 26, 2007, now Pat. No. 7,635,800, which (Continued) is a division of application No. 10/225,066, filed on OTHER PUBLICATIONS Aug. 9, 2002, now Pat. No. 7,238,860, which is a Doerks et al., (TIG, 14:248-250, 1998).* continuation-in-part of application No. 09/837,944, Smith et al. (Nature Biotechnology, 15:1222-1223, 1997).* filed on Apr. 18, 2001, now abandoned, and a Bork et al. (TIG, 12:425-427, 1996).* continuation-in-part of application No. 10/171.468, Wells (Biochemistry 29:8509-8517, 1990).* filed on Jun. 14, 2002, now abandoned, and a Guo et al. (PNAS, 101: 9205-9210, 2004).* continuation-in-part of application No. 10/225,066, Keskinet al. (Protein Science, 13:1043-1055, 2004).* application No. 1 1/981,667, which is a Thornton et al. (Nature structural Biology, structural genomics continuation-in-part of application No. 10/412,699, supplement, Nov. 2000).* filed on Apr. 10, 2003, now Pat. No. 7,345,217, which is a continuation-in-part of application No. (Continued) 10/295,403, filed on Nov. 15, 2002, now abandoned, Primary Examiner — Vinod Kumar which is a division of application No. 09/394,519, filed (74) Attorney, Agent, or Firm — Cooley LLP on Sep. 13, 1999, now abandoned, said application N (57) ABSTRACT 10/412,699 is a continuation-in-part of application N 09/713,994, filed on Nov. 16, 2000, now abandone Polynucleotides incorporated into nucleic acid constructs and a continuation-in-part of application N have been introduced into plants and were ectopically 09/819,142, filed on Mar. 27, 2001, now abandone expressed. The encoded polypeptides of the invention have and a continuation-in-part of application N been shown to confer at least one regulatory activity and 09/934,455, filed on Aug. 22, 2001, now abandone confer earlier flowering, longer floral organ retention, which is a continuation-in-part of application N increased cold tolerance, greater tolerance to water depriva 09/713,994, filed on Nov. 16, 2000, now abandone tion, altered carbon-nitrogen balance sensing, increased low and a continuation-in-part of application N nitrogen tolerance, and/or increased tolerance to hyperos 09/837,944, said application No. 10/412,699 is a motic stress as compared to a control plant. continuation-in-part of application No. 10/225,066, 11 Claims, 10 Drawing Sheets US 8,022,274 B2 Page 2 U.S. PATENT DOCUMENTS AAK83920 Haung, et al. “MADS-box protein Ipomoea batatas.” 6,717,034 B2 4/2004 Jiang Aug. 5, 2001. 6,835,540 B2 12/2004 Broun CAA57445 Angenent, G. “fbp11 Petunia hybrida.” Jun. 14, 1996. 6,946,586 B1 9, 2005 Fromm et al. AAB71434 Kang, et al. “MADS box protein Oryza satival.” Nov. 7,109,393 B2 9, 2006 Gutterson et al. 25, 1996. 7,135,616 B2 11/2006 Heard et al. CAA86585 Kim, et al. “orf Feb. 1, 1995. 7,223,904 B2 5, 2007 Heard et al. 7,238,860 B2 7/2007 Ratcliffe et al. AAF28863 Mouradov, et al. “DEF/GLO-like protein Pinus 7,345,217 B2 3/2008 Zhang et al. radiata.” Feb. 1, 2000. 2003/0093837 A1 5, 2003 Keddie et al. CAA56655 Hardenack, S. “SLM1.” Dec. 16, 1994. 2003/O121070 A1 6, 2003 Adam et al. AAD01742 Perl-Treves, et al. "agamous-like putative transcription 2003/0217383 A1 11/2003 Reuber et al. factor Cucumis sativus.” Jan. 5, 1999. 2004/OO 19927 A1 1/2004 Sherman et al. DQ323884 Lauri, et al. "Antirrhinum maius DEFH125 protein gene, 2004/0045049 A1 3/2004 Zhang et al. promoter region and partial cds.” Jan. 9, 2006. 2004/O128712 A1 7/2004 Jiang et al. 2005, OO86718 A1 4/2005 Heard et al. AW218280 Van Der Hoeven, et al. “EST303461 tomato radicle, 5 d 2005/OO97638 A1 5/2005 Jiang et al. post-imbibition, Cornell University Solanum lycopersicum cDNA 2005/O155117 A1 7/2005 Century et al. clone cI.EZ6G19 similar to Medicago. .” May 18, 2001. 2005/0172364 A1 8, 2005 Heard et al. A 1974336 Vandenbosch, et al. “T110185e Kvo Medicago truncatula 2006, OOO8874 A1 1/2006 Creelman et al. cDNA clone pKV0-1J1, mRNA sequence.” Aug. 26, 1999. 2006, OO15972 A1 1/2006 Heard et al. U91964 Dunn, et al. “Medicago sativa MADS-box protein mRNA, 2006,0162018 A1 7/2006 Gutterson et al. partial cds.” Apr. 6, 1997. 2006/0195944 A1 8, 2006 Heard et al. 2006/0242738 A1 10, 2006 Sherman et al. BG592879 Van Der Hoeven, et al. “EST49 1557 cSTS Solanum 2006/0272060 A1 11/2006 Heard et al. tuberosum cDNA clone cSTS2N7 5’ sequence, mRNA sequence.” 2007/0022495 A1 1/2007 Reuber et al. Mar. 7, 2003. 2007/0O33671 A1 2/2007 Jiang et al. AX085162 Loerz, et al. “Sequence 12 from Patent WOO112798.” 2007/0101454 A1 5/2007 Jiang et al. Mar. 9, 2001. 2007,0186308 A1 8, 2007 Reuber et al. AP003868 Sasaki, et al. “Oryza sativa chromosome 8 clone 2007/0199.107 A1 8, 2007 Ratcliffe et al. OJ1111 B08, Sequencing in Progress.” Jul. 10, 2001. 2007/0209086 A1 9, 2007 Ratcliffe et al. AW706936 Shoemaker, et al. “sk08d08.y1 Gm-c1023 Glycinemax 2007/02268.39 A1 9, 2007 Gutterson et al. cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1023-3496 2008/0010703 A1 1/2008 Creelman et al. 5'similar to TR:O49351 O49351 ANR1 . .” Jul 24, 2004. 2008. O163397 A1 7/2008 Ratcliffe et al. BE596.704 Cordonnier-Pratt, et al. “PI1 58 F04.b1 AO02 Patho 2008/0229448 A1 9/2008 Libby et al. gen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence.” Aug. 2008/0301836 A1 12/2008 Century et al. 2008/030 1840 A1 12/2008 Gutterson et al. 18, 2000. 2008/030 1841 A1 12/2008 Ratcliffe et al. AF396746 Haung, et al. "Ipomoea batatas MADS-box protein (MADS1) mRNA, complete cols.” Aug. 5, 2001. FOREIGN PATENT DOCUMENTS Alvarez-Buylla, et al. (2000). "An ancestral MADS-box gene dupli EP O666317 8, 1995 cation occurred before the divergence of plants and animals.” Proc EP 1033405 A2 * 6, 2000 Natl AcadSci U S A. 97:5328-33. JP 1999.346773. A 1 12/1999 Battaglia, et al. (2006). “Functional analysis of MADS-box genes WO WO/94/OO582 1, 1994 controlling ovule development in Arabidopsis using the ethanol WO WO.99,04003 1, 1999 inducible alc gene-expression system.” Mech Dev 123, 267-276. WO WO/OO?O4176 1, 2000 Ben-Naim, et al. (2006). “The CCAAT binding factor can mediate WO WO/OO.37488 6, 2000 interactions between CONSTANS-like proteins and DNA” Plant J WO WO/O1,04315 1, 2001 46,462-476. WO WO/O1? 12799 2, 2001 WO WO/O1? 12798 3, 2001 Coruzzi, et al.
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