2015 Program
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
THE ENVIRONMENTAL LEGACY of the UC NATURAL RESERVE SYSTEM This Page Intentionally Left Blank the Environmental Legacy of the Uc Natural Reserve System
THE ENVIRONMENTAL LEGACY OF THE UC NATURAL RESERVE SYSTEM This page intentionally left blank the environmental legacy of the uc natural reserve system edited by peggy l. fiedler, susan gee rumsey, and kathleen m. wong university of california press Berkeley Los Angeles London The publisher gratefully acknowledges the generous contri- bution to this book provided by the University of California Natural Reserve System. University of California Press, one of the most distinguished university presses in the United States, enriches lives around the world by advancing scholarship in the humanities, social sciences, and natural sciences. Its activities are supported by the UC Press Foundation and by philanthropic contributions from individuals and institutions. For more information, visit www.ucpress.edu. University of California Press Berkeley and Los Angeles, California University of California Press, Ltd. London, England © 2013 by The Regents of the University of California Library of Congress Cataloging-in-Publication Data The environmental legacy of the UC natural reserve system / edited by Peggy L. Fiedler, Susan Gee Rumsey, and Kathleen M. Wong. p. cm. Includes bibliographical references and index. ISBN 978-0-520-27200-2 (cloth : alk. paper) 1. Natural areas—California. 2. University of California Natural Reserve System—History. 3. University of California (System)—Faculty. 4. Environmental protection—California. 5. Ecology—Study and teaching— California. 6. Natural history—Study and teaching—California. I. Fiedler, Peggy Lee. II. Rumsey, Susan Gee. III. Wong, Kathleen M. (Kathleen Michelle) QH76.5.C2E59 2013 333.73'1609794—dc23 2012014651 Manufactured in China 19 18 17 16 15 14 13 10 9 8 7 6 5 4 3 2 1 The paper used in this publication meets the minimum requirements of ANSI/NISO Z39.48-1992 (R 2002) (Permanence of Paper). -
Cobia Database Articles Final Revision 2.0, 2-1-2017
Revision 2.0 (2/1/2017) University of Miami Article TITLE DESCRIPTION AUTHORS SOURCE YEAR TOPICS Number Habitat 1 Gasterosteus canadus Linné [Latin] [No Abstract Available - First known description of cobia morphology in Carolina habitat by D. Garden.] Linnaeus, C. Systema Naturæ, ed. 12, vol. 1, 491 1766 Wild (Atlantic/Pacific) Ichthyologie, vol. 10, Iconibus ex 2 Scomber niger Bloch [No Abstract Available - Description and alternative nomenclature of cobia.] Bloch, M. E. 1793 Wild (Atlantic/Pacific) illustratum. Berlin. p . 48 The Fisheries and Fishery Industries of the Under this head was to be carried on the study of the useful aquatic animals and plants of the country, as well as of seals, whales, tmtles, fishes, lobsters, crabs, oysters, clams, etc., sponges, and marine plants aml inorganic products of U.S. Commission on Fisheries, Washington, 3 United States. Section 1: Natural history of Goode, G.B. 1884 Wild (Atlantic/Pacific) the sea with reference to (A) geographical distribution, (B) size, (C) abundance, (D) migrations and movements, (E) food and rate of growth, (F) mode of reproduction, (G) economic value and uses. D.C., 895 p. useful aquatic animals Notes on the occurrence of a young crab- Proceedings of the U.S. National Museum 4 eater (Elecate canada), from the lower [No Abstract Available - A description of cobia in the lower Hudson Eiver.] Fisher, A.K. 1891 Wild (Atlantic/Pacific) 13, 195 Hudson Valley, New York The nomenclature of Rachicentron or Proceedings of the U.S. National Museum Habitat 5 Elacate, a genus of acanthopterygian The universally accepted name Elucate must unfortunately be supplanted by one entirely unknown to fame, overlooked by all naturalists, and found in no nomenclator. -
Environmental DNA Reveals the Fine-Grained and Hierarchical
www.nature.com/scientificreports OPEN Environmental DNA reveals the fne‑grained and hierarchical spatial structure of kelp forest fsh communities Thomas Lamy 1,2*, Kathleen J. Pitz 3, Francisco P. Chavez3, Christie E. Yorke1 & Robert J. Miller1 Biodiversity is changing at an accelerating rate at both local and regional scales. Beta diversity, which quantifes species turnover between these two scales, is emerging as a key driver of ecosystem function that can inform spatial conservation. Yet measuring biodiversity remains a major challenge, especially in aquatic ecosystems. Decoding environmental DNA (eDNA) left behind by organisms ofers the possibility of detecting species sans direct observation, a Rosetta Stone for biodiversity. While eDNA has proven useful to illuminate diversity in aquatic ecosystems, its utility for measuring beta diversity over spatial scales small enough to be relevant to conservation purposes is poorly known. Here we tested how eDNA performs relative to underwater visual census (UVC) to evaluate beta diversity of marine communities. We paired UVC with 12S eDNA metabarcoding and used a spatially structured hierarchical sampling design to assess key spatial metrics of fsh communities on temperate rocky reefs in southern California. eDNA provided a more‑detailed picture of the main sources of spatial variation in both taxonomic richness and community turnover, which primarily arose due to strong species fltering within and among rocky reefs. As expected, eDNA detected more taxa at the regional scale (69 vs. 38) which accumulated quickly with space and plateaued at only ~ 11 samples. Conversely, the discovery rate of new taxa was slower with no sign of saturation for UVC. -
Recreational Boating As a Major Vector of Spread of Nonindigenous Species Around the Mediterranean Aylin Ulman
Recreational boating as a major vector of spread of nonindigenous species around the Mediterranean Aylin Ulman To cite this version: Aylin Ulman. Recreational boating as a major vector of spread of nonindigenous species around the Mediterranean. Ecosystems. Sorbonne Université, 2018. English. NNT : 2018SORUS222. tel- 02483397 HAL Id: tel-02483397 https://tel.archives-ouvertes.fr/tel-02483397 Submitted on 18 Feb 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Sorbonne Université Università di Pavia Ecole doctorale CNRS, Laboratoire d'Ecogeochimie des Environments Benthiques, LECOB, F-66650 Banyuls-sur-Mer, France Recreational boating as a major vector of spread of non- indigenous species around the Mediterranean La navigation de plaisance, vecteur majeur de la propagation d’espèces non-indigènes autour des marinas Méditerranéenne Par Aylin Ulman Thèse de doctorat de Philosophie Dirigée par Agnese Marchini et Jean-Marc Guarini Présentée et soutenue publiquement le 6 Avril, 2018 Devant un jury composé de : Anna Occhipinti (President, University -
Congolli (Pseudaphritis Urvillii) and Australian Salmon (Arripis Truttaceus and A
Inland Waters and Catchment Ecology Diet and trophic characteristics of mulloway (Argyrosomus japonicus), congolli (Pseudaphritis urvillii) and Australian salmon (Arripis truttaceus and A. trutta) in the Coorong George Giatas and Qifeng Ye SARDI Publication No. F2015/000479-1 SARDI Research Report Series No. 858 SARDI Aquatics Sciences PO Box 120 Henley Beach SA 5022 September 2015 Giatas and Ye (2015) Diet of three fish species in the Coorong Diet and trophic characteristics of mulloway (Argyrosomus japonicus), congolli (Pseudaphritis urvillii) and Australian salmon (Arripis truttaceus and A. trutta) in the Coorong George Giatas and Qifeng Ye SARDI Publication No. F2015/000479-1 SARDI Research Report Series No. 858 September 2015 II Giatas and Ye (2015) Diet of three fish species in the Coorong This publication may be cited as: Giatas, G.C. and Ye, Q. (2015). Diet and trophic characteristics of mulloway (Argyrosomus japonicus), congolli (Pseudaphritis urvillii) and Australian salmon (Arripis truttaceus and A. trutta) in the Coorong. South Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2015/000479-1. SARDI Research Report Series No. 858. 81pp. South Australian Research and Development Institute SARDI Aquatic Sciences 2 Hamra Avenue West Beach SA 5024 Telephone: (08) 8207 5400 Facsimile: (08) 8207 5406 http://www.pir.sa.gov.au/research DISCLAIMER The authors warrant that they have taken all reasonable care in producing this report. The report has been through the SARDI internal review process, and has been formally approved for release by the Research Chief, Aquatic Sciences. Although all reasonable efforts have been made to ensure quality, SARDI does not warrant that the information in this report is free from errors or omissions. -
Fertilization Selection on Egg and Jelly-Coat Size in the Sand Dollar Dendraster Excentricus
Evolution, 55(12), 2001, pp. 2479±2483 FERTILIZATION SELECTION ON EGG AND JELLY-COAT SIZE IN THE SAND DOLLAR DENDRASTER EXCENTRICUS DON R. LEVITAN1,2 AND STACEY D. IRVINE2 1Department of Biological Science, Florida State University, Tallahassee, Florida 32306-1100 2Bam®eld Marine Station, Bam®eld, British Columbia VOR 1B0, Canada Abstract. Organisms with external fertilization are often sperm limited, and in echinoids, larger eggs have a higher probability of fertilization than smaller eggs. This difference is thought to be a result of the more frequent sperm- egg collisions experienced by larger targets. Here we report how two components of egg target size, the egg cell and jelly coat, contributed to fertilization success in a selection experiment. We used a cross-sectional analysis of correlated characters to estimate the selection gradients on egg and jelly-coat size in ®ve replicate male pairs of the sand dollar Dendraster excentricus. Results indicated that eggs with larger cells and jelly coats were preferentially fertilized under sperm limitation in the laboratory. The selection gradients were an average of 922% steeper for egg than for jelly- coat size. The standardized selection gradients for egg and jelly-coat size were similar. Our results suggest that fertilization selection can act on both egg-cell and jelly-coat size but that an increase in egg-cell volume is much more likely to increase fertilization success than an equal change in jelly-coat volume. The strengths of the selection gradients were inversely related to the correlation of egg traits across replicate egg clutches. This result suggests the importance of replication in studies of selection of correlated characters. -
Chitons (Mollusca: Polyplacophora) Known from Benthic Monitoring Programs in the Southern California Bight
ISSN 0738-9388 THE FESTIVUS A publication of the San Diego Shell Club Volume XLI Special Issue June 11, 2009 Chitons (Mollusca: Polyplacophora) Known from Benthic Monitoring Programs in the Southern California Bight Timothy D. Stebbins and Douglas J. Eernisse COVER PHOTO Live specimen of Lepidozona sp. C occurring on a piece of metal debris collected off San Diego, southern California at a depth of 90 m. Photo provided courtesy of R. Rowe. Vol. XLI(6): 2009 THE FESTIVUS Page 53 CHITONS (MOLLUSCA: POLYPLACOPHORA) KNOWN FROM BENTHIC MONITORING PROGRAMS IN THE SOUTHERN CALIFORNIA BIGHT TIMOTHY D. STEBBINS 1,* and DOUGLAS J. EERNISSE 2 1 City of San Diego Marine Biology Laboratory, Metropolitan Wastewater Department, San Diego, CA, USA 2 Department of Biological Science, California State University, Fullerton, CA, USA Abstract: About 36 species of chitons possibly occur at depths greater than 30 m along the continental shelf and slope of the Southern California Bight (SCB), although little is known about their distribution or ecology. Nineteen species are reported here based on chitons collected as part of long-term, local benthic monitoring programs or less frequent region-wide surveys of the entire SCB, and these show little overlap with species that occur at depths typically encountered by scuba divers. Most chitons were collected between 30-305 m depths, although records are included for a few from slightly shallower waters. Of the two extant chiton lineages, Lepidopleurida is represented by Leptochitonidae (2 genera, 3 species), while Chitonida is represented by Ischnochitonidae (2 genera, 6-9 species) and Mopaliidae (4 genera, 7 species). -
Terrestrial and Marine Biological Resource Information
APPENDIX C Terrestrial and Marine Biological Resource Information Appendix C1 Resource Agency Coordination Appendix C2 Marine Biological Resources Report APPENDIX C1 RESOURCE AGENCY COORDINATION 1 The ICF terrestrial biological team coordinated with relevant resource agencies to discuss 2 sensitive biological resources expected within the terrestrial biological study area (BSA). 3 A summary of agency communications and site visits is provided below. 4 California Department of Fish and Wildlife: On July 30, 2020, ICF held a conference 5 call with Greg O’Connell (Environmental Scientist) and Corianna Flannery (Environmental 6 Scientist) to discuss Project design and potential biological concerns regarding the 7 Eureka Subsea Fiber Optic Cables Project (Project). Mr. O’Connell discussed the 8 importance of considering the western bumble bee. Ms. Flannery discussed the 9 importance of the hard ocean floor substrate and asked how the cable would be secured 10 to the ocean floor to reduce or eliminate scour. The western bumble bee has been 11 evaluated in the Biological Resources section of the main document, and direct and 12 indirect impacts are avoided. The Project Description describes in detail how the cable 13 would be installed on the ocean floor, the importance of the hard bottom substrate, and 14 the need for avoidance. 15 Consultation Outcomes: 16 • The Project was designed to avoid hard bottom substrate, and RTI Infrastructure 17 (RTI) conducted surveys of the ocean floor to ensure that proper routing of the 18 cable would occur. 19 • Ms. Flannery will be copied on all communications with the National Marine 20 Fisheries Service 21 California Department of Fish and Wildlife: On August 7, 2020, ICF held a conference 22 call with Greg O’Connell to discuss a site assessment and survey approach for the 23 western bumble bee. -
Host DNA Integrity Within Blood Meals of Hematophagous Larval Gnathiid Isopods (Crustacea, Isopoda, Gnathiidae) Gina C
Hendrick et al. Parasites Vectors (2019) 12:316 https://doi.org/10.1186/s13071-019-3567-8 Parasites & Vectors RESEARCH Open Access Host DNA integrity within blood meals of hematophagous larval gnathiid isopods (Crustacea, Isopoda, Gnathiidae) Gina C. Hendrick1,2, Maureen C. Dolan1,2, Tanja McKay1 and Paul C. Sikkel1* Abstract Background: Juvenile gnathiid isopods are common ectoparasites of marine fshes. Each of the three juvenile stages briefy attach to a host to obtain a blood meal but spend most of their time living in the substrate, thus making it difcult to determine patterns of host exploitation. Sequencing of host blood meals from wild-caught specimens is a promising tool to determine host identity. Although established protocols for this approach exist, certain challenges must be overcome when samples are subjected to typical feld conditions that may contribute to DNA degradation. The goal of this study was to address a key methodological issue associated with molecular-based host identifcation from free-living, blood-engorged gnathiid isopods—the degradation of host DNA within blood meals. Here we have assessed the length of time host DNA within gnathiid blood meals can remain viable for positive host identifcation. Methods: Juvenile gnathiids were allowed to feed on fsh of known species and subsets were preserved at 4-h intervals over 24 h and then every 24 h up to 5 days post-feeding. Host DNA extracted from gnathiid blood meals was sequenced to validate the integrity of host DNA at each time interval. DNA was also extracted from blood meals of wild-fed gnathiids for comparison. -
Reef-Associated Ichthyofauna from a Marginal Coral Reef Habitat Along the West Coast of India: Implication for Management Strategies
Cah. Biol. Mar. (2021) 62 : 87-97 DOI: 10.21411/CBM.A.DF8FA0B8 Reef-associated ichthyofauna from a marginal coral reef habitat along the west coast of India: Implication for management strategies Kalyan DE1,2, Sushant V. SANAYE3, Sambhaji MOTE1, Mandar NANAJKAR1 and Baban INGOLE1 (1) CSIR-National Institute of Oceanography, Goa - 403004, India (2) School of Earth, Ocean, and Atmospheric Sciences, Goa University, Taleigao, Goa - 403206, India (3) 3Mangrove and Marine Biodiversity Conservation Foundation of Maharashtra, 302, 3rd Floor, Wakefield House, Above Britannia & Co. Restaurant, Ballard Estate, Fort, Mumbai - 400 001, India Corresponding author: [email protected]; [email protected] Abstract: Coral reefs harbour remarkable high biodiversity. Reef fishes are among the most important communities in the coral reef ecosystem, significantly contributing to ecosystem functioning and reef resilience. However, under the continuous effect of climate change and human activities, corals and reef fishes are in peril. For the first time, we documented coral reef-associated ichthyofauna from Malvan marine sanctuary (MMS) on the central west coast of India, an understudied marginal patch coral reef habitat. Experiencing severe stress due to concurrent coral bleaching, fishing, sedimentation, intensifying tourism, and coastal development activities. We reported the occurrence of 47 species of reef fishes belonging to 35 genera and 26 families from the MMS, also a list of hard corals from in the MMS, thus highlighting the biodiversity of reef building corals and reef fishes in the MMS. The coral habitat in the MMS is experiencing severe stress due to concurrent thermal coral bleaching, fishing, sedimentation, intensifying tourism, and coastal development activities. -
Genetic Divergence and Polyphyly in the Octocoral Genus Swiftia [Cnidaria: Octocorallia], Including a Species Impacted by the DWH Oil Spill
diversity Article Genetic Divergence and Polyphyly in the Octocoral Genus Swiftia [Cnidaria: Octocorallia], Including a Species Impacted by the DWH Oil Spill Janessy Frometa 1,2,* , Peter J. Etnoyer 2, Andrea M. Quattrini 3, Santiago Herrera 4 and Thomas W. Greig 2 1 CSS Dynamac, Inc., 10301 Democracy Lane, Suite 300, Fairfax, VA 22030, USA 2 Hollings Marine Laboratory, NOAA National Centers for Coastal Ocean Sciences, National Ocean Service, National Oceanic and Atmospheric Administration, 331 Fort Johnson Rd, Charleston, SC 29412, USA; [email protected] (P.J.E.); [email protected] (T.W.G.) 3 Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, 10th and Constitution Ave NW, Washington, DC 20560, USA; [email protected] 4 Department of Biological Sciences, Lehigh University, 111 Research Dr, Bethlehem, PA 18015, USA; [email protected] * Correspondence: [email protected] Abstract: Mesophotic coral ecosystems (MCEs) are recognized around the world as diverse and ecologically important habitats. In the northern Gulf of Mexico (GoMx), MCEs are rocky reefs with abundant black corals and octocorals, including the species Swiftia exserta. Surveys following the Deepwater Horizon (DWH) oil spill in 2010 revealed significant injury to these and other species, the restoration of which requires an in-depth understanding of the biology, ecology, and genetic diversity of each species. To support a larger population connectivity study of impacted octocorals in the Citation: Frometa, J.; Etnoyer, P.J.; GoMx, this study combined sequences of mtMutS and nuclear 28S rDNA to confirm the identity Quattrini, A.M.; Herrera, S.; Greig, Swiftia T.W.