B.Sc. II YEAR CHORDATA
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Hedges2009chap39.Pdf
Vertebrates (Vertebrata) S. Blair Hedges Vertebrates are treated here as a separate phylum Department of Biology, 208 Mueller Laboratory, Pennsylvania State rather than a subphylum of Chordata. 7 e morpho- University, University Park, PA 16802-5301, USA ([email protected]) logical disparity among the chordates (urochordates, cepahalochordates, and vertebrates), and their deep time of separation based on molecular clocks (5) is as great Abstract as that among other groups of related animal phyla (e.g., The vertebrates (~58,000 sp.) comprise a phylum of mostly arthropods, tardigrades, and onycophorans). 7 e phyl- mobile, predatory animals. The evolution of jaws and ogeny of the lineages covered here is uncontroversial, for limbs were key traits that led to subsequent diversifi cation. the most part. Evidence from nuclear genes and morph- Atmospheric oxygen change appears to have played a major ology (1, 2, 6, 7) agree in the backbone phylogeny of ver- role, with an initial rise in the late Precambrian (~580–542 tebrates represented by these nested groups: Tetrapoda million years ago, Ma) permitting larger body size, followed (Lissamphibia, Amniota), Sarcopterygii (Actinistia, by two Paleozoic pulses affecting prey. The First Pulse Dipnoi, Tetrapoda), Osteichthyes (Actinopterygii, (~430–390 Ma) brought fi shes to brackish and freshwater Sarcopterygii), and Gnathostomata (Chondrichthyes, environments where they diversifi ed, with one lineage giv- Osteichthyes). ing rise to tetrapods. The Second Pulse (~340–250 Ma) led to Cyclostomata wa s or ig i na l ly considered a ba sa l, mono- a Permo-Carboniferous explosion of tetrapods, adapting to phyletic group based on morphology (8), but later mor- diverse terrestrial niches. -
Ontogenetic Diet Change in the Arthroleptid Frog Schoutedenella Xenodactyloides
SHORTER COMMUNICATIONS Journal of Herpetology, Vol. 40, No. 3, pp. 388–394, 2006 Copyright 2006 Society for the Study of Amphibians and Reptiles Ontogenetic Diet Change in the Arthroleptid Frog Schoutedenella xenodactyloides 1,2 3 DAVID C. BLACKBURN AND CORRIE S. MOREAU 1Department of Herpetology, Museum of Comparative Zoology, Harvard University, Cambridge, Massachussetts 02138, USA; E-mail: [email protected] 3Department of Entomology, Museum of Comparative Zoology, Harvard University, Cambridge, Massachussetts 02138, USA ABSTRACT.—Anuran amphibians are important consumers of arthropods in tropical ecosystems. Previous research has indicated that very small, terrestrial frogs, especially juveniles, largely consume small leaf litter arthropods. To date, few studies have examined diet in African anurans, and no studies exist of ontogenetic change in prey composition for any African frog. We investigated the change in diet that accompanies body size increase in the arthroleptid frog Schoutedenella xenodactyloides (Anura: Ranoidea) from a population located on the Mulanje Massif in Malawi, central Africa. Schoutedenella xenodactyloides is a miniature (, 22 mm snout–urostyle length; SUL), direct-developing frog that is often very abundant and is likely an important consumer of small leaf litter arthropods. Based on examination of stomach and intestinal contents from specimens that span the known range of posthatching body sizes, we document the taxonomic diversity of prey consumed by S. xenodactyloides. We present evidence that S. xenodactyloides exhibits a size-related ontogenetic change in the type and relative proportions of prey taxa. Small frogs (# 13 mm SUL) consume large numbers of collembolans and mites. As frogs attain larger body sizes; ants constitute a larger percentage of the total number of prey consumed; and collembolan and mite consumption falls below 10% of the total prey items. -
Bioseries12-Amphibians-Taita-English
0c m 12 Symbol key 3456 habitat pond puddle river stream 78 underground day / night day 9101112131415161718 night altitude high low vegetation types shamba forest plantation prelim pages ENGLISH.indd ii 2009/10/22 02:03:47 PM SANBI Biodiversity Series Amphibians of the Taita Hills by G.J. Measey, P.K. Malonza and V. Muchai 2009 prelim pages ENGLISH.indd Sec1:i 2009/10/27 07:51:49 AM SANBI Biodiversity Series The South African National Biodiversity Institute (SANBI) was established on 1 September 2004 through the signing into force of the National Environmental Management: Biodiversity Act (NEMBA) No. 10 of 2004 by President Thabo Mbeki. The Act expands the mandate of the former National Botanical Institute to include responsibilities relating to the full diversity of South Africa’s fauna and ora, and builds on the internationally respected programmes in conservation, research, education and visitor services developed by the National Botanical Institute and its predecessors over the past century. The vision of SANBI: Biodiversity richness for all South Africans. SANBI’s mission is to champion the exploration, conservation, sustainable use, appreciation and enjoyment of South Africa’s exceptionally rich biodiversity for all people. SANBI Biodiversity Series publishes occasional reports on projects, technologies, workshops, symposia and other activities initiated by or executed in partnership with SANBI. Technical editor: Gerrit Germishuizen Design & layout: Elizma Fouché Cover design: Elizma Fouché How to cite this publication MEASEY, G.J., MALONZA, P.K. & MUCHAI, V. 2009. Amphibians of the Taita Hills / Am bia wa milima ya Taita. SANBI Biodiversity Series 12. South African National Biodiversity Institute, Pretoria. -
Selection, Constraint, and Adaptation in the Visual Genes of Neotropical Cichlid Fishes and Other Vertebrates
SELECTION, CONSTRAINT, AND ADAPTATION IN THE VISUAL GENES OF NEOTROPICAL CICHLID FISHES AND OTHER VERTEBRATES by Frances Elisabeth Hauser A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Ecology and Evolutionary Biology University of Toronto © Copyright by Frances E. Hauser 2018 SELECTION, CONSTRAINT, AND ADAPTATION IN THE VISUAL GENES OF NEOTROPICAL CICHLID FISHES AND OTHER VERTEBRATES Frances E. Hauser Doctor of Philosophy, 2018 Department of Ecology and Evolutionary Biology University of Toronto 2018 ABSTRACT The visual system serves as a direct interface between an organism and its environment. Studies of the molecular components of the visual transduction cascade, in particular visual pigments, offer an important window into the relationship between genetic variation and organismal fitness. In this thesis, I use molecular evolutionary models as well as protein modeling and experimental characterization to assess the role of variable evolutionary rates on visual protein function. In Chapter 2, I review recent work on the ecological and evolutionary forces giving rise to the impressive variety of adaptations found in visual pigments. In Chapter 3, I use interspecific vertebrate and mammalian datasets of two visual genes (RH1 or rhodopsin, and RPE65, a retinoid isomerase) to assess different methods for estimating evolutionary rate across proteins and the reliability of inferring evolutionary conservation at individual amino acid sites, with a particular emphasis on sites implicated in impaired protein function. ii In Chapters 4, and 5, I narrow my focus to devote particular attention to visual pigments in Neotropical cichlids, a highly diverse clade of fishes distributed across South and Central America. -
Ancistrus Dolichopterus) in Aquarium Conditions
LIMNOFISH-Journal of Limnology and Freshwater Fisheries Research 6(3): 231-237 (2020) A Preliminary Study on Reproduction and Development of Bushymouth Catfish (Ancistrus dolichopterus) in Aquarium Conditions Mustafa DENİZ1* , T. Tansel TANRIKUL2 , Onur KARADAL3 , Ezgi DİNÇTÜRK2 F. Rabia KARADUMAN 1 1Department of Aquaculture, Graduate School of Natural and Applied Sciences, İzmir Kâtip Çelebi University, 35620, Çiğli, İzmir, Turkey 2Department of Fish Diseases, Faculty of Fisheries, İzmir Kâtip Çelebi University, 35620, Çiğli, İzmir, Turkey 3Department of Aquaculture, Faculty of Fisheries, İzmir Kâtip Çelebi University, 35620, Çiğli, İzmir, Turkey ABSTRACT ARTICLE INFO Dwarf suckermouth catfish are preferred especially for small aquariums. They are RESEARCH ARTICLE usually referred to as tank cleaners and commonly traded in the ornamental fish sector. Since these fish are nocturnal, it is difficult to observe their reproductive Received : 28.02.2020 behavior and larval development. This study was carried out to determine the Revised : 05.06.2020 reproductive variables of bushymouth catfish (Ancistrus dolichopterus) under aquarium conditions. Three broodstocks bushymouth catfish with an average Accepted : 09.06.2020 initial weight and a total length of 10.5±0.3 g and 9.5±0.2 cm were stocked in Published : 29.12.2020 three 240-L aquariums with the ratio of 1:2 (male: female). The observations were made in triplicate tanks for six months. Females laid an average of 39.78±0.41 DOI:10.17216/LimnoFish.695413 eggs and fertilization and hatching rates were 75.05% and 62.94%, respectively. It was found that the transition time from egg to apparently larval stage was * CORRESPONDING AUTHOR 105.28 h, and bushymouth catfish showed an indistinguishable development from [email protected] the hatching to juvenile stage without a real larval transition stage. -
View Preprint
A peer-reviewed version of this preprint was published in PeerJ on 30 March 2017. View the peer-reviewed version (peerj.com/articles/3077), which is the preferred citable publication unless you specifically need to cite this preprint. Oliver PM, Iannella A, Richards SJ, Lee MSY. 2017. Mountain colonisation, miniaturisation and ecological evolution in a radiation of direct-developing New Guinea Frogs (Choerophryne, Microhylidae) PeerJ 5:e3077 https://doi.org/10.7717/peerj.3077 Mountain colonisation, miniaturisation and ecological evolution in a radiation of direct developing New Guinea Frogs (Choerophryne, Microhylidae) Paul M Oliver Corresp., 1 , Amy Iannella 2 , Stephen J Richards 3 , Michael S.Y Lee 3, 4 1 Division of Ecology and Evolution, Research School of Biology & Centre for Biodiversity Analysis, Australian National University, Canberra, Australian Capital Territory, Australia 2 School of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia 3 South Australian Museum, Adelaide, South Australia, Australia 4 School of Biological Sciences, Flinders University, Adelaide, South Australia, Australia Corresponding Author: Paul M Oliver Email address: [email protected] Aims. Mountain ranges in the tropics are characterised by high levels of localised endemism, often-aberrant evolutionary trajectories, and some of the world’s most diverse regional biotas. Here we investigate the evolution of montane endemism, ecology and body size in a clade of direct-developing frogs (Choerophryne, Microhylidae) from New Guinea. Methods. Phylogenetic relationships were estimated from a mitochondrial molecular dataset using Bayesian and maximum likelihood approaches. Ancestral state reconstruction was used to infer the evolution of elevational distribution, ecology (indexed by male calling height), and body size, and phylogenetically corrected regression was employed to examine the relationships between these three traits. -
Fishes Scales & Tails Scale Types 1
Phylum Chordata SUBPHYLUM VERTEBRATA Metameric chordates Linear series of cartilaginous or boney support (vertebrae) surrounding or replacing the notochord Expanded anterior portion of nervous system THE FISHES SCALES & TAILS SCALE TYPES 1. COSMOID (most primitive) First found on ostracaderm agnathans, thick & boney - composed of: Ganoine (enamel outer layer) Cosmine (thick under layer) Spongy bone Lamellar bone Perhaps selected for protection against eurypterids, but decreased flexibility 2. GANOID (primitive, still found on some living fish like gar) 3. PLACOID (old scale type found on the chondrichthyes) Dentine, tooth-like 4. CYCLOID (more recent scale type, found in modern osteichthyes) 5. CTENOID (most modern scale type, found in modern osteichthyes) TAILS HETEROCERCAL (primitive, still found on chondrichthyes) ABBREVIATED HETEROCERCAL (found on some primitive living fish like gar) DIPHYCERCAL (primitive, found on sarcopterygii) HOMOCERCAL (most modern, found on most modern osteichthyes) Agnatha (class) [connect the taxa] Cyclostomata (order) Placodermi Acanthodii (class) (class) Chondrichthyes (class) Osteichthyes (class) Actinopterygii (subclass) Sarcopterygii (subclass) Dipnoi (order) Crossopterygii (order) Ripidistia (suborder) Coelacanthiformes (suborder) Chondrostei (infra class) Holostei (infra class) Teleostei (infra class) CLASS AGNATHA ("without jaws") Most primitive - first fossils in Ordovician Bottom feeders, dorsal/ventral flattened Cosmoid scales (Ostracoderms) Pair of eyes + pineal eye - present in a few living fish and reptiles - regulates circadian rhythms Nine - seven gill pouches No paired appendages, medial nosril ORDER CYCLOSTOMATA (60 spp) Last living representatives - lampreys & hagfish Notochord not replaced by vertebrae Cartilaginous cranium, scaleless body Sea lamprey predaceous - horny teeth in buccal cavity & on tongue - secretes anti-coaggulant Lateral Line System No stomach or spleen 5 - 7 year life span - adults move into freshwater streams, spawn, & die. -
Genome Sequences of Tropheus Moorii and Petrochromis Trewavasae, Two Eco‑Morphologically Divergent Cichlid Fshes Endemic to Lake Tanganyika C
www.nature.com/scientificreports OPEN Genome sequences of Tropheus moorii and Petrochromis trewavasae, two eco‑morphologically divergent cichlid fshes endemic to Lake Tanganyika C. Fischer1,2, S. Koblmüller1, C. Börger1, G. Michelitsch3, S. Trajanoski3, C. Schlötterer4, C. Guelly3, G. G. Thallinger2,5* & C. Sturmbauer1,5* With more than 1000 species, East African cichlid fshes represent the fastest and most species‑rich vertebrate radiation known, providing an ideal model to tackle molecular mechanisms underlying recurrent adaptive diversifcation. We add high‑quality genome reconstructions for two phylogenetic key species of a lineage that diverged about ~ 3–9 million years ago (mya), representing the earliest split of the so‑called modern haplochromines that seeded additional radiations such as those in Lake Malawi and Victoria. Along with the annotated genomes we analysed discriminating genomic features of the study species, each representing an extreme trophic morphology, one being an algae browser and the other an algae grazer. The genomes of Tropheus moorii (TM) and Petrochromis trewavasae (PT) comprise 911 and 918 Mbp with 40,300 and 39,600 predicted genes, respectively. Our DNA sequence data are based on 5 and 6 individuals of TM and PT, and the transcriptomic sequences of one individual per species and sex, respectively. Concerning variation, on average we observed 1 variant per 220 bp (interspecifc), and 1 variant per 2540 bp (PT vs PT)/1561 bp (TM vs TM) (intraspecifc). GO enrichment analysis of gene regions afected by variants revealed several candidates which may infuence phenotype modifcations related to facial and jaw morphology, such as genes belonging to the Hedgehog pathway (SHH, SMO, WNT9A) and the BMP and GLI families. -
Anura:Microhylidae
THE PHYLOGENY OF THE PAPUAN SUBFAIÏILY ASTEROPHRYINAE (ANURA: MICROHYLIDAE) by THO¡1IAS CHARLES BURTON, 8.4., B.Sc. (Hons)MeIb. Department of Zoology University of Adelaide A thesis submitted to the UniVersity of Adelaide for the degree of Doctor of PhilosoPhY JT'NE 1.9 8 3 To ChwLø SUMMARY THE PHYLOGENY OF THE PAPUAN SUBFAMILY ASTEROPHRYINAE (nruunR : MI cRoHyt-rrRE) The Asterophryinae is a subfamily of terrestrial and fossorial microhylid frogs restricted to the Papuan Sub- Region. It comprises 43 named species and subspecies in seven genera. A second microhylid subfamily, the Sphenophryninae, also occurs in the Papuan Sub-Region, and its relationship to the Asterophryinae is contentious- In this study I undertake a phylogenetic analysis of the Asterophryinae based on the results of an examination of the myology, osteology and external morphology of members of all of the genera, and also of members of the Sphenophryninae, other microhylid. subfamilies and the Ranoidea, which serve as out-groups at different levels of analysis. The Asterophryinae and Sphenophryninae form a monophyletic group (sensu Hennig, 19661 supported by two autapomorphies: (a) direct embryonic development within the egg capsule; and (b) fusion and enlargement of the palatine and prevomer. The monophyly of the Asterophryinae is supported by three autapomorphies: (a) posterior adherence of the tongue and its division into anterior and posterior sections; (b) fusion of elements of the mandible and displacement of the mentomeckelians from the anterior margin of the mandible; and (c) loss of a dorsal el-ement J-aa of the M. intermandíbuLaris. The monophyly of the Sphenophryninae is supported by only one character of dubious value: procoely of the vertebral column. -
Conserved Keratin Gene Clusters in Ancient Fish: an Evolutionary Seed for Terrestrial Adaptation
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.06.063123; this version posted October 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Conserved Keratin Gene Clusters in Ancient Fish: an Evolutionary Seed for Terrestrial Adaptation Yuki Kimura1 and Masato Nikaido*,1 1 School of Life Science and Technology, Tokyo Institute of Technology * Corresponding author: E-mail: [email protected] Keywords: Gene cluster; Keratin; Vertebrate evolution; Comparative genomics; Phylogenetics; Selection analysis; Synteny analysis Highlights Two major keratin clusters are conserved from sharks to terrestrial vertebrates. Adult epidermis-specific keratins in amphibians stem from the two major clusters. A novel keratin gene subcluster was found in reedfish. Ancestral krt18/krt8 gene sets were found in all vertebrates. Functional diversification signatures were found in reedfish and amphibian keratins. 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.05.06.063123; this version posted October 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Type I and type II keratins are subgroups of intermediate filament proteins that provide toughness to the epidermis and protect it from water loss. In terrestrial vertebrates, the keratin genes form two major clusters, clusters 1 and 2, each of which is dominated by type I and II keratin genes. -
Biodiversity in Sub-Saharan Africa and Its Islands Conservation, Management and Sustainable Use
Biodiversity in Sub-Saharan Africa and its Islands Conservation, Management and Sustainable Use Occasional Papers of the IUCN Species Survival Commission No. 6 IUCN - The World Conservation Union IUCN Species Survival Commission Role of the SSC The Species Survival Commission (SSC) is IUCN's primary source of the 4. To provide advice, information, and expertise to the Secretariat of the scientific and technical information required for the maintenance of biologi- Convention on International Trade in Endangered Species of Wild Fauna cal diversity through the conservation of endangered and vulnerable species and Flora (CITES) and other international agreements affecting conser- of fauna and flora, whilst recommending and promoting measures for their vation of species or biological diversity. conservation, and for the management of other species of conservation con- cern. Its objective is to mobilize action to prevent the extinction of species, 5. To carry out specific tasks on behalf of the Union, including: sub-species and discrete populations of fauna and flora, thereby not only maintaining biological diversity but improving the status of endangered and • coordination of a programme of activities for the conservation of bio- vulnerable species. logical diversity within the framework of the IUCN Conservation Programme. Objectives of the SSC • promotion of the maintenance of biological diversity by monitoring 1. To participate in the further development, promotion and implementation the status of species and populations of conservation concern. of the World Conservation Strategy; to advise on the development of IUCN's Conservation Programme; to support the implementation of the • development and review of conservation action plans and priorities Programme' and to assist in the development, screening, and monitoring for species and their populations.