Myelin Protein Zero Is Naturally Processed in the B Cells Of
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And MMP-Mediated Cell–Matrix Interactions in the Tumor Microenvironment
International Journal of Molecular Sciences Review Hold on or Cut? Integrin- and MMP-Mediated Cell–Matrix Interactions in the Tumor Microenvironment Stephan Niland and Johannes A. Eble * Institute of Physiological Chemistry and Pathobiochemistry, University of Münster, 48149 Münster, Germany; [email protected] * Correspondence: [email protected] Abstract: The tumor microenvironment (TME) has become the focus of interest in cancer research and treatment. It includes the extracellular matrix (ECM) and ECM-modifying enzymes that are secreted by cancer and neighboring cells. The ECM serves both to anchor the tumor cells embedded in it and as a means of communication between the various cellular and non-cellular components of the TME. The cells of the TME modify their surrounding cancer-characteristic ECM. This in turn provides feedback to them via cellular receptors, thereby regulating, together with cytokines and exosomes, differentiation processes as well as tumor progression and spread. Matrix remodeling is accomplished by altering the repertoire of ECM components and by biophysical changes in stiffness and tension caused by ECM-crosslinking and ECM-degrading enzymes, in particular matrix metalloproteinases (MMPs). These can degrade ECM barriers or, by partial proteolysis, release soluble ECM fragments called matrikines, which influence cells inside and outside the TME. This review examines the changes in the ECM of the TME and the interaction between cells and the ECM, with a particular focus on MMPs. Keywords: tumor microenvironment; extracellular matrix; integrins; matrix metalloproteinases; matrikines Citation: Niland, S.; Eble, J.A. Hold on or Cut? Integrin- and MMP-Mediated Cell–Matrix 1. Introduction Interactions in the Tumor Microenvironment. -
The Intrinsically Disordered Proteins of Myelin in Health and Disease
cells Review Flexible Players within the Sheaths: The Intrinsically Disordered Proteins of Myelin in Health and Disease Arne Raasakka 1 and Petri Kursula 1,2,* 1 Department of Biomedicine, University of Bergen, Jonas Lies vei 91, NO-5009 Bergen, Norway; [email protected] 2 Faculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Aapistie 7A, FI-90220 Oulu, Finland * Correspondence: [email protected] Received: 30 January 2020; Accepted: 16 February 2020; Published: 18 February 2020 Abstract: Myelin ensheathes selected axonal segments within the nervous system, resulting primarily in nerve impulse acceleration, as well as mechanical and trophic support for neurons. In the central and peripheral nervous systems, various proteins that contribute to the formation and stability of myelin are present, which also harbor pathophysiological roles in myelin disease. Many myelin proteins have common attributes, including small size, hydrophobic segments, multifunctionality, longevity, and regions of intrinsic disorder. With recent advances in protein biophysical characterization and bioinformatics, it has become evident that intrinsically disordered proteins (IDPs) are abundant in myelin, and their flexible nature enables multifunctionality. Here, we review known myelin IDPs, their conservation, molecular characteristics and functions, and their disease relevance, along with open questions and speculations. We place emphasis on classifying the molecular details of IDPs in myelin, and we correlate these with their various functions, including susceptibility to post-translational modifications, function in protein–protein and protein–membrane interactions, as well as their role as extended entropic chains. We discuss how myelin pathology can relate to IDPs and which molecular factors are potentially involved. Keywords: myelin; intrinsically disordered protein; multiple sclerosis; peripheral neuropathies; myelination; protein folding; protein–membrane interaction; protein–protein interaction 1. -
Ɑ6ß1 Andɑ7ß1 Integrins Are Required in Schwann Cells to Sort
The Journal of Neuroscience, November 13, 2013 • 33(46):17995–18007 • 17995 Cellular/Molecular ␣61 and ␣71 Integrins Are Required in Schwann Cells to Sort Axons Marta Pellegatta,1,2 Ade`le De Arcangelis,3 Alessandra D’Urso,1 Alessandro Nodari,1 Desire´e Zambroni,1 Monica Ghidinelli,1,2 Vittoria Matafora,1 Courtney Williamson,2 Elisabeth Georges-Labouesse,3† Jordan Kreidberg,4 Ulrike Mayer,5 Karen K. McKee,6 Peter D. Yurchenco,6 Angelo Quattrini,1 Lawrence Wrabetz,1,2 and Maria Laura Feltri1,2 1San Raffaele Scientific Institute, Milano 20132, Italy, 2Hunter James Kelly Research Institute, University at Buffalo, State University of New York, New York 14203, 3Development and Stem Cells Program, Institut de Ge´ne´tique et de Biologie Mole´culaire et Cellulaire, Centre National de la Recherche Scientifique, Unite´ Mixte de Recherche 7104, Institut National de la Sante´ et de la Recherche Me´dicale U964, Universite´ de Strasbourg, Illkirch 67404, France, 4Department of Medicine, Children’s Hospital Boston and Department of Pediatrics, Harvard Medical School, Boston, Massachusetts 02115, 5Biomedical Research Centre, School of Biological Sciences, University of East Anglia, Norwich NR4 7TJ, United Kingdom, and 6Robert Wood Johnson Medical School, Piscataway, New Jersey, New Jersey 08854 During development, Schwann cells extend lamellipodia-like processes to segregate large- and small-caliber axons during the process of radial sorting. Radial sorting is a prerequisite for myelination and is arrested in human neuropathies because of laminin deficiency. Experiments in mice using targeted mutagenesis have confirmed that laminins 211, 411, and receptors containing the 1 integrin subunit are required for radial sorting; however, which of the 11 ␣ integrins that can pair with 1 forms the functional receptor is unknown. -
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Published OnlineFirst December 17, 2015; DOI: 10.1158/0008-5472.CAN-15-0884 Cancer Tumor and Stem Cell Biology Research Eva1 Maintains the Stem-like Character of Glioblastoma-Initiating Cells by Activating the Noncanonical NF-kB Signaling Pathway Naoki Ohtsu1, Yuka Nakatani2, Daisuke Yamashita3, Shiro Ohue3, Takanori Ohnishi3,and Toru Kondo1,2 Abstract Glioblastoma (GBM)–initiating cells (GIC) are a tumorigenic as Eva1 overexpression enhanced these properties. Eva1 deficien- subpopulation that are resistant to radio- and chemotherapies cy was also associated with decreased expression of stemness- and are the source of disease recurrence. Therefore, the identifi- related genes, indicating a requirement for Eva1 in maintaining cation and characterization of GIC-specific factors is critical GIC pluripotency. We further demonstrate that Eva1 induced GIC toward the generation of effective GBM therapeutics. In this study, proliferation through the activation of the RelB-dependent non- we investigated the role of epithelial V-like antigen 1 (Eva1, also canonical NF-kB pathway by recruiting TRAF2 to the cytoplasmic known as myelin protein zero-like 2) in stemness and GBM tail. Taken together, our findings highlight Eva1 as a novel tumorigenesis. Eva1 was prominently expressed in GICs in vitro regulator of GIC function and also provide new mechanistic and in stem cell marker (Sox2, CD15, CD49f)-expressing cells insight into the role of noncanonical NF-kB activation in GIC, derived from human GBM tissues. Eva1 knockdown in GICs thus offering multiple potential therapeutic targets for preclinical reduced their self-renewal and tumor-forming capabilities, where- investigation in GBM. Cancer Res; 76(1); 171–81. Ó2015 AACR. -
How Does Protein Zero Assemble Compact Myelin?
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 13 May 2020 doi:10.20944/preprints202005.0222.v1 Peer-reviewed version available at Cells 2020, 9, 1832; doi:10.3390/cells9081832 Perspective How Does Protein Zero Assemble Compact Myelin? Arne Raasakka 1,* and Petri Kursula 1,2 1 Department of Biomedicine, University of Bergen, Jonas Lies vei 91, NO-5009 Bergen, Norway 2 Faculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Aapistie 7A, FI-90220 Oulu, Finland; [email protected] * Correspondence: [email protected] Abstract: Myelin protein zero (P0), a type I transmembrane protein, is the most abundant protein in peripheral nervous system (PNS) myelin – the lipid-rich, periodic structure that concentrically encloses long axonal segments. Schwann cells, the myelinating glia of the PNS, express P0 throughout their development until the formation of mature myelin. In the intramyelinic compartment, the immunoglobulin-like domain of P0 bridges apposing membranes together via homophilic adhesion, forming a dense, macroscopic ultrastructure known as the intraperiod line. The C-terminal tail of P0 adheres apposing membranes together in the narrow cytoplasmic compartment of compact myelin, much like myelin basic protein (MBP). In mouse models, the absence of P0, unlike that of MBP or P2, severely disturbs the formation of myelin. Therefore, P0 is the executive molecule of PNS myelin maturation. How and when is P0 trafficked and modified to enable myelin compaction, and how disease mutations that give rise to incurable peripheral neuropathies alter the function of P0, are currently open questions. The potential mechanisms of P0 function in myelination are discussed, providing a foundation for the understanding of mature myelin development and how it derails in peripheral neuropathies. -
Supplementary Table 1: Adhesion Genes Data Set
Supplementary Table 1: Adhesion genes data set PROBE Entrez Gene ID Celera Gene ID Gene_Symbol Gene_Name 160832 1 hCG201364.3 A1BG alpha-1-B glycoprotein 223658 1 hCG201364.3 A1BG alpha-1-B glycoprotein 212988 102 hCG40040.3 ADAM10 ADAM metallopeptidase domain 10 133411 4185 hCG28232.2 ADAM11 ADAM metallopeptidase domain 11 110695 8038 hCG40937.4 ADAM12 ADAM metallopeptidase domain 12 (meltrin alpha) 195222 8038 hCG40937.4 ADAM12 ADAM metallopeptidase domain 12 (meltrin alpha) 165344 8751 hCG20021.3 ADAM15 ADAM metallopeptidase domain 15 (metargidin) 189065 6868 null ADAM17 ADAM metallopeptidase domain 17 (tumor necrosis factor, alpha, converting enzyme) 108119 8728 hCG15398.4 ADAM19 ADAM metallopeptidase domain 19 (meltrin beta) 117763 8748 hCG20675.3 ADAM20 ADAM metallopeptidase domain 20 126448 8747 hCG1785634.2 ADAM21 ADAM metallopeptidase domain 21 208981 8747 hCG1785634.2|hCG2042897 ADAM21 ADAM metallopeptidase domain 21 180903 53616 hCG17212.4 ADAM22 ADAM metallopeptidase domain 22 177272 8745 hCG1811623.1 ADAM23 ADAM metallopeptidase domain 23 102384 10863 hCG1818505.1 ADAM28 ADAM metallopeptidase domain 28 119968 11086 hCG1786734.2 ADAM29 ADAM metallopeptidase domain 29 205542 11085 hCG1997196.1 ADAM30 ADAM metallopeptidase domain 30 148417 80332 hCG39255.4 ADAM33 ADAM metallopeptidase domain 33 140492 8756 hCG1789002.2 ADAM7 ADAM metallopeptidase domain 7 122603 101 hCG1816947.1 ADAM8 ADAM metallopeptidase domain 8 183965 8754 hCG1996391 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 129974 27299 hCG15447.3 ADAMDEC1 ADAM-like, -
Fibromodulin: Structure, Physiological Functions, and an Emphasis on Its Potential Clinical Applications in Various Diseases Mohammad M
SYSTEMATIC REVIEW ARTICLE Fibromodulin: Structure, Physiological Functions, and an Emphasis on its Potential Clinical Applications in Various Diseases Mohammad M. Al-Qattan and Ahmed M. Al-Qattan ABSTRACT Fibromodulin (FMOD) is one of the small leucine-rich proteoglycans. A search of the literature did not reveal any paper that specifically reviews the potential clinical applications of FMOD in the management of human diseases. First, the structure and physiological functions of FMOD were reviewed. Then its potential clinical applications in various diseases including diseases of the skin, tendons, joints, intervertebral discs, blood vessels, teeth, uterus, bone and kidney were reviewed. FMOD is able to switch the adult response to skin wounding to the desired fetal response of scarless healing. Lowered levels of FMOD would be desirable in the management of tendinopathy, uterine fibroids, tumors resistant to radiotherapy, glioblastomas, small-cell lung cancer, and primary liver/lung fibrosis. In contrast, increased levels of FMOD would be desirable in the management of acute tendon injuries, osteoarthritis, rheumatoid arthritis, temporo-mandibular disease, joint laxity, intervertebral disc disease, neo-intimal hyperplasia of vein grafts, teeth caries, periodontal disease, endometrial atrophy, osteoporosis and diabetic nephropathy. Furthermore, FMOD may be used as a prognostic marker of cerebrovascular events in patients undergoing carotid endarterectomy and a marker for prostatic cancer. Finally, the use of FMOD in the treatment of symptomatic endometrial atrophy should be explored in women who are unable to use the standard estrogen management for endometrial atrophy. The review concluded that clinical trials in humans should be initiated to investigate the potential therapeutic effects of FMOD. -
Identification of Novel FNIN2 and FNIN3 Fibronectin-Derived
International Journal of Molecular Sciences Article Identification of Novel FNIN2 and FNIN3 Fibronectin-Derived Peptides That Promote Cell Adhesion, Proliferation and Differentiation in Primary Cells and Stem Cells Eun-Ju Lee 1,2,† , Khurshid Ahmad 1,2,† , Shiva Pathak 3, SunJu Lee 1, Mohammad Hassan Baig 1 , Jee-Heon Jeong 3 , Kyung-Oh Doh 4, Dong-Mok Lee 5 and Inho Choi 1,2,* 1 Department of Medical Biotechnology, Yeungnam University, Gyeongsan 38541, Korea; [email protected] (E.-J.L.); [email protected] (K.A.); [email protected] (S.L.); [email protected] (M.H.B.) 2 Research Institute of Cell Culture, Yeungnam University, Gyeongsan 38541, Korea 3 College of Pharmacy, Yeungnam University, Gyeongsan, Gyeongbuk 38541, Korea; [email protected] (S.P.); [email protected] (J.-H.J.) 4 Department of Physiology, College of Medicine, Yeungnam University, Daegu 42415, Korea; [email protected] 5 Technology Convergence R&D Group, Korea Institute of Industrial Technology, Yeongcheon 770200, Korea; [email protected] * Correspondence: [email protected]; Fax: +82-53-810-4769 † These authors contributed equally to this work. Abstract: In recent years, a major rise in the demand for biotherapeutic drugs has centered on enhancing the quality and efficacy of cell culture and developing new cell culture techniques. Here, Citation: Lee, E.-J.; Ahmad, K.; we report fibronectin (FN) derived, novel peptides fibronectin-based intergrin binding peptide Pathak, S.; Lee, S.; Baig, M.H.; Jeong, (FNIN)2 (18-mer) and FNIN3 (20-mer) which promote cell adhesion proliferation, and the differentia- J.-H.; Doh, K.-O.; Lee, D.-M.; Choi, I. -
Differential Gene Expression in Oligodendrocyte Progenitor Cells, Oligodendrocytes and Type II Astrocytes
Tohoku J. Exp. Med., 2011,Differential 223, 161-176 Gene Expression in OPCs, Oligodendrocytes and Type II Astrocytes 161 Differential Gene Expression in Oligodendrocyte Progenitor Cells, Oligodendrocytes and Type II Astrocytes Jian-Guo Hu,1,2,* Yan-Xia Wang,3,* Jian-Sheng Zhou,2 Chang-Jie Chen,4 Feng-Chao Wang,1 Xing-Wu Li1 and He-Zuo Lü1,2 1Department of Clinical Laboratory Science, The First Affiliated Hospital of Bengbu Medical College, Bengbu, P.R. China 2Anhui Key Laboratory of Tissue Transplantation, Bengbu Medical College, Bengbu, P.R. China 3Department of Neurobiology, Shanghai Jiaotong University School of Medicine, Shanghai, P.R. China 4Department of Laboratory Medicine, Bengbu Medical College, Bengbu, P.R. China Oligodendrocyte precursor cells (OPCs) are bipotential progenitor cells that can differentiate into myelin-forming oligodendrocytes or functionally undetermined type II astrocytes. Transplantation of OPCs is an attractive therapy for demyelinating diseases. However, due to their bipotential differentiation potential, the majority of OPCs differentiate into astrocytes at transplanted sites. It is therefore important to understand the molecular mechanisms that regulate the transition from OPCs to oligodendrocytes or astrocytes. In this study, we isolated OPCs from the spinal cords of rat embryos (16 days old) and induced them to differentiate into oligodendrocytes or type II astrocytes in the absence or presence of 10% fetal bovine serum, respectively. RNAs were extracted from each cell population and hybridized to GeneChip with 28,700 rat genes. Using the criterion of fold change > 4 in the expression level, we identified 83 genes that were up-regulated and 89 genes that were down-regulated in oligodendrocytes, and 92 genes that were up-regulated and 86 that were down-regulated in type II astrocytes compared with OPCs. -
Antigen Interaction with B Cells in Two Proliferative Disorders
Linköping University Medical Dissertations No. 1158 Antigen interaction with B cells in two proliferative disorders - CLL and MGUS Eva Hellqvist Akademisk avhandling som för avläggande av medicine doktorsexamen offentligen försvaras i Aulan, Katastrofmedicinskt Centrum, Linköping, fredagen den 15 januari 2010 kl. 9.00 Fakultetsopponent Dr Anne Mette Buhl Department of Hematology, Rigshospitalet Copenhagen, Denmark Division of Cell Biology Department of Clinical and Experimental Medicine Linköping University, SE-581 85 Linköping, Sweden Linköping 2010 All text, tables and illustrations are © Eva Hellqvist, 2010 The original papers included in this thesis have been reprinted with the permission of respective copyright holder: Paper I: © the American Society of Hematology Paper IV: © the Ferrata Storti Foundation ISSN: 0345-0082 ISBN: 978-91-7393-475-6 Printed in Sweden by LiU-Tryck, Linköping 2010 “This world, after all our science and sciences, is still a miracle; wonderful, inscrutable, magical and more, to whosoever will think of it. ” – Thomas Carlyle TO MY GREAT SURPRISE SUPERVISOR Anders Rosén, Professor Division of Cell Biology Department of Clinical and Experimental Medicine Linköping University, Sweden CO-SUPERVISOR Jan Ernerudh, Professor Division of Clinical Immunology Department of Clinical and Experimental Medicine Linköping University, Sweden OPPONENT Anne Mette Buhl, Associate Professor Department of Hematology Rigshospitalet Copenhagen, Denmark COMMITTEE BOARD Hodjattalah Rabbani, Associate Professor Immune and Gene Therapy -
(12) United States Patent (10) Patent No.: US 6,939,952 B2 Zhao (45) Date of Patent: Sep
USOO69399.52B2 (12) United States Patent (10) Patent No.: US 6,939,952 B2 Zhao (45) Date of Patent: Sep. 6, 2005 (54) PURIFIED AND ISOLATED PROTEIN ZERO Bowie et al. Deciphering the message in protein Sequences: RELATED (PZR) POLYPEPTIDE tolerance to amino acid substitutions. Science (1990) vol. 247, pp. 1306–1310.* (75) Inventor: Zhizhuang Zhao, Franklin, TN (US) GenBank Accession if AAD55347. (73) Assignee: Vanderbilt University, Nashville, TN Burshtyn et al., “Regulation Through Inhibitory Receptors: (US) Lessons from Natural Killer Cells”, Trends in Cell Biology, (*) Notice: Subject to any disclaimer, the term of this vol. 7, p. 473–479, (Dec., 1997). patent is extended or adjusted under 35 Choe, “Packing of Myelin Protein Zero, Neuron, vol. 17, p. U.S.C. 154(b) by 69 days. 363-365, (Sep., 1996). Harding, “From the Syndrome of Charcot, Marie and Tooth (21) Appl. No.: 10/095,131 to Disorders of Peripheral Myelin Proteins,” Brain, vol. 118, (22) Filed: Mar 11, 2002 p. 809–818, (Nov., 1995). Saxton et al., “Abnormal Mesoderm Patterning in Mouse (65) Prior Publication Data Embryos Mutant for the SH2 Tyrosine Phosphatase Shp-2.” US 2003/0171565 A1 Sep. 11, 2003 The EMBO Journal, vol. 16 (No. 9), p. 2352–2364, (Nov., 1997). Related U.S. Application Data Tidow et al., “SH2-Containing Protein Tyrosine Phos (62) Division of application No. 09/430.503, filed on Oct. 29, phatases SHP-1 and SHP-2 are Dramatically Increased at 1999, now Pat. No. 6,355,786. the Protein Level in Neutrophils from Patients with Severe (60) Provisional application No. -
Peripheral Myelin Protein 22 (Pmp22) Is in a Complex with Alpha6 Beta4 Integrin and the Absence of Pmp22 Affects Schwann Cell Adhesion and Migration
PERIPHERAL MYELIN PROTEIN 22 (PMP22) IS IN A COMPLEX WITH ALPHA6 BETA4 INTEGRIN AND THE ABSENCE OF PMP22 AFFECTS SCHWANN CELL ADHESION AND MIGRATION By STEPHANIE ANN AMICI A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 2006 Copyright 2006 by Stephanie Ann Amici I dedicate this work to my family for their constant love and support. ACKNOWLEDGMENTS Most importantly, I would like to thank my advisor, Dr. Lucia Notterpek, for the inspiration and support she has given to me. She has always had my best interests in mind and has been essential in my growth as a scientist and as a person. I also express my gratitude to my committee members, Dr. Brad Fletcher, Dr. Dena Howland, Dr. Harry Nick and Dr. Susan Frost, for their insights and suggestions for my project. Similarly, Dr. William Dunn deserves acknowledgement for his advice and assistance with the electron microscopy studies. Heartfelt thanks also go to the past and present members of the Notterpek lab for their amazing friendships over the years. Finally, my deepest gratitude goes to my family, especially my parents, for their continuous love and encouragement throughout my life. iv TABLE OF CONTENTS page ACKNOWLEDGMENTS ................................................................................................. iv LIST OF FIGURES .......................................................................................................... vii LIST OF ABBREVIATIONS...........................................................................................