Diverging Lineages in the Ericales Diversity and Evolution of Floral
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Cytomorphological Diversity in Some Species of Impatiens Linn. (Balsaminaceae) from Western Himalayas (India)
© 2010 The Japan Mendel Society Cytologia 75(4): 379–387, 2010 Cytomorphological Diversity in Some Species of Impatiens Linn. (Balsaminaceae) from Western Himalayas (India) Syed Mudassir Jeelani*, Savita Rani, Sanjeev Kumar, Raghbir Chand Gupta and Santosh Kumari Department of Botany, Punjabi University, Patiala 147 002, India Received May 28, 2010; accepted August 28, 2010 Summary The genus Impatiens Linn. belongs to the family Balsaminaceae and includes mostly wild as well as commonly cultivated ornamental plants. Nearly 91% of Indian species of Impatiens are reported to be endemic. To generate basic information on genetic diversity required for the improvement of germplasm, the present study has been carried out from the different selected parts of Western Himalayas such as Kashmir (J&K) and the Kangra and Sirmaur districts (H.P). During this study, 23 accessions belonging to 9 species of the genus Impatiens have been cytomorphologi- cally observed. The species being cytologically worked out for the first time on a worldwide basis include 2 species as I.laxiflora (nϭ7, 8) and I. reidii (nϭ7). Six aneuploid cytotypes have been reported for the first time for the species I. arguta (nϭ7), I. bicornuta (nϭ7), I. brachycentra (nϭ8), I. glandulifera (nϭ6), I. scabrida (nϭ6) and I. sulcata (nϭ8) on a worldwide basis. The meiotic course in most of these accessions has been observed to be normal except for some of the accessions of I. brachycentra, I. glandulifera, I. scabrida and I. sulcata marked with abnormal meiosis. Out of 4 species (6 accessions) marked with cytomixis, in 2 accessions, one for each of I. scabrida and I. -
Impatiens Glandulifera (Himalayan Balsam) Chloroplast Genome Sequence As a Promising Target for Populations Studies
Impatiens glandulifera (Himalayan balsam) chloroplast genome sequence as a promising target for populations studies Giovanni Cafa1, Riccardo Baroncelli2, Carol A. Ellison1 and Daisuke Kurose1 1 CABI Europe, Egham, Surrey, UK 2 University of Salamanca, Instituto Hispano-Luso de Investigaciones Agrarias (CIALE), Villamayor (Salamanca), Spain ABSTRACT Background: Himalayan balsam Impatiens glandulifera Royle (Balsaminaceae) is a highly invasive annual species native of the Himalayas. Biocontrol of the plant using the rust fungus Puccinia komarovii var. glanduliferae is currently being implemented, but issues have arisen with matching UK weed genotypes with compatible strains of the pathogen. To support successful biocontrol, a better understanding of the host weed population, including potential sources of introductions, of Himalayan balsam is required. Methods: In this molecular study, two new complete chloroplast (cp) genomes of I. glandulifera were obtained with low coverage whole genome sequencing (genome skimming). A 125-year-old herbarium specimen (HB92) collected from the native range was sequenced and assembled and compared with a 2-year-old specimen from UK field plants (HB10). Results: The complete cp genomes were double-stranded molecules of 152,260 bp (HB92) and 152,203 bp (HB10) in length and showed 97 variable sites: 27 intragenic and 70 intergenic. The two genomes were aligned and mapped with two closely related genomes used as references. Genome skimming generates complete organellar genomes with limited technical and financial efforts and produces large datasets compared to multi-locus sequence typing. This study demonstrates the 26 July 2019 Submitted suitability of genome skimming for generating complete cp genomes of historic Accepted 12 February 2020 Published 24 March 2020 herbarium material. -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Gilia Sedifolia Brandeg. (Stonecrop Gilia): a Technical Conservation Assessment
Gilia sedifolia Brandeg. (stonecrop gilia): A Technical Conservation Assessment Prepared for the USDA Forest Service, Rocky Mountain Region, Species Conservation Project August 9, 2004 David G. Anderson Colorado Natural Heritage Program 8002 Campus Delivery — Colorado State University Fort Collins, CO 80523 Peer Review Administered by Society for Conservation Biology Anderson, D.G. (2004, August 9). Gilia sedifolia Brandeg. (stonecrop gilia): a technical conservation assessment. [Online]. USDA Forest Service, Rocky Mountain Region. Available: http://www.fs.fed.us/r2/projects/scp/ assessments/giliasedifolia.pdf [date of access]. ACKNOWLEDGEMENTS This research was facilitated by the helpfulness and generosity of many experts, particularly Bill Jennings, Susan Komarek, Peggy Lyon, J. Mark Porter, and James Reveal. Their interest in the project and time spent answering questions were extremely valuable, and their insights into the distribution, habitat, classification, and ecology ofGilia sedifolia were crucial to this project. The rediscovery of this species and its subsequent documentation are solely the work of Susan Komarek; without her efforts very little could be said about this species. J. Mark Porter’s thoughts and insights into this species have contributed greatly to our understanding of G. sedifolia. Greg Hayward, Gary Patton, Jim Maxwell, Andy Kratz, Beth Burkhart, and Joy Bartlett assisted with questions and project management. Jane Nusbaum, Carmen Morales, Betty Eckert, Candyce Jeffery, and Barbara Brayfield provided crucial financial oversight. Amy Lavender assisted with the production of the potential habitat distribution map. Annette Miller provided information for the report on seed storage status. Nan Lederer and Tim Hogan provided valuable assistance and insights at the CU Herbarium, as did Janet Wingate and Loraine Yeatts at the Kalmbach Herbarium. -
ACTINIDIACEAE 1. ACTINIDIA Lindley, Nat. Syst. Bot., Ed. 2, 439
ACTINIDIACEAE 猕猴桃科 mi hou tao ke Li Jianqiang (李建强)1, Li Xinwei (李新伟)1; Djaja Djendoel Soejarto2 Trees, shrubs, or woody vines. Leaves alternate, simple, shortly or long petiolate, not stipulate. Flowers bisexual or unisexual or plants polygamous or functionally dioecious, usually fascicled, cymose, or paniculate. Sepals (2 or 3 or)5, imbricate, rarely valvate. Petals (4 or)5, sometimes more, imbricate. Stamens 10 to numerous, distinct or adnate to base of petals, hypogynous; anthers 2- celled, versatile, dehiscing by apical pores or longitudinally. Ovary superior, disk absent, locules and carpels 3–5 or more; placentation axile; ovules anatropous with a single integument, 10 or more per locule; styles as many as carpels, distinct or connate (then only one style), generally persistent. Fruit a berry or leathery capsule. Seeds not arillate, with usually large embryos and abundant endosperm. Three genera and ca. 357 species: Asia and the Americas; three genera (one endemic) and 66 species (52 endemic) in China. Economically, kiwifruit (Actinidia chinensis var. deliciosa) is an important fruit, which originated in central China and is especially common along the Yangtze River (well known as yang-tao). Now, it is widely cultivated throughout the world. For additional information see the paper by X. W. Li, J. Q. Li, and D. D. Soejarto (Acta Phytotax. Sin. 45: 633–660. 2007). Liang Chou-fen, Chen Yong-chang & Wang Yu-sheng. 1984. Actinidiaceae (excluding Sladenia). In: Feng Kuo-mei, ed., Fl. Reipubl. Popularis Sin. 49(2): 195–301, 309–334. 1a. Trees or shrubs; flowers bisexual or plants functionally dioecious .................................................................................. 3. Saurauia 1b. -
Anza-Borrego Desert State Park Bibliography Compiled and Edited by Jim Dice
Steele/Burnand Anza-Borrego Desert Research Center University of California, Irvine UCI – NATURE and UC Natural Reserve System California State Parks – Colorado Desert District Anza-Borrego Desert State Park & Anza-Borrego Foundation Anza-Borrego Desert State Park Bibliography Compiled and Edited by Jim Dice (revised 1/31/2019) A gaggle of geneticists in Borrego Palm Canyon – 1975. (L-R, Dr. Theodosius Dobzhansky, Dr. Steve Bryant, Dr. Richard Lewontin, Dr. Steve Jones, Dr. TimEDITOR’S Prout. Photo NOTE by Dr. John Moore, courtesy of Steve Jones) Editor’s Note The publications cited in this volume specifically mention and/or discuss Anza-Borrego Desert State Park, locations and/or features known to occur within the present-day boundaries of Anza-Borrego Desert State Park, biological, geological, paleontological or anthropological specimens collected from localities within the present-day boundaries of Anza-Borrego Desert State Park, or events that have occurred within those same boundaries. This compendium is not now, nor will it ever be complete (barring, of course, the end of the Earth or the Park). Many, many people have helped to corral the references contained herein (see below). Any errors of omission and comission are the fault of the editor – who would be grateful to have such errors and omissions pointed out! [[email protected]] ACKNOWLEDGEMENTS As mentioned above, many many people have contributed to building this database of knowledge about Anza-Borrego Desert State Park. A quantum leap was taken somewhere in 2016-17 when Kevin Browne introduced me to Google Scholar – and we were off to the races. Elaine Tulving deserves a special mention for her assistance in dealing with formatting issues, keeping printers working, filing hard copies, ignoring occasional foul language – occasionally falling prey to it herself, and occasionally livening things up with an exclamation of “oh come on now, you just made that word up!” Bob Theriault assisted in many ways and now has a lifetime job, if he wants it, entering these references into Zotero. -
Phylogenomic Approach
Toward the ultimate phylogeny of Magnoliaceae: phylogenomic approach Sangtae Kim*1, Suhyeon Park1, and Jongsun Park2 1 Sungshin University, Korea 2 InfoBoss Co., Korea Mr. Carl Ferris Miller Founder of Chollipo Arboretum in Korea Chollipo Arboretum Famous for its magnolia collection 2020. Annual Meeting of Magnolia Society International Cholliop Arboretum in Korea. April 13th~22th, 2020 http://WWW.Chollipo.org Sungshin University, Seoul, Korea Dr. Hans Nooteboom Dr. Liu Yu-Hu Twenty-one years ago... in 1998 The 1st International Symposium on the Family Magnoliaceae, Gwangzhow Dr. Hiroshi Azuma Mr. Richard Figlar Dr. Hans Nooteboom Dr. Qing-wen Zeng Dr. Weibang Sun Handsome young boy Dr. Yong-kang Sima Dr. Yu-wu Law Presented ITS study on Magnoliaceae - never published Ten years ago... in 2009 Presented nine cp genome region study (9.2 kbp) on Magnoliaceae – published in 2013 2015 1st International Sympodium on Neotropical Magnoliaceae Gadalajara, 2019 3rd International Sympodium and Workshop on Neotropical Magnoliaceae Asterales Dipsacales Apiales Why magnolia study is Aquifoliales Campanulids (Euasterids II) Garryales Gentianales Laminales Solanales Lamiids important in botany? Ericales Asterids (Euasterids I) Cornales Sapindales Malvales Brassicales Malvids Fagales (Eurosids II) • As a member of early-diverging Cucurbitales Rosales Fabales Zygophyllales Celestrales Fabids (Eurosid I) angiosperms, reconstruction of the Oxalidales Malpighiales Vitales Geraniales Myrtales Rosids phylogeny of Magnoliaceae will Saxifragales Caryphyllales -
Full of Beans: a Study on the Alignment of Two Flowering Plants Classification Systems
Full of beans: a study on the alignment of two flowering plants classification systems Yi-Yun Cheng and Bertram Ludäscher School of Information Sciences, University of Illinois at Urbana-Champaign, USA {yiyunyc2,ludaesch}@illinois.edu Abstract. Advancements in technologies such as DNA analysis have given rise to new ways in organizing organisms in biodiversity classification systems. In this paper, we examine the feasibility of aligning two classification systems for flowering plants using a logic-based, Region Connection Calculus (RCC-5) ap- proach. The older “Cronquist system” (1981) classifies plants using their mor- phological features, while the more recent Angiosperm Phylogeny Group IV (APG IV) (2016) system classifies based on many new methods including ge- nome-level analysis. In our approach, we align pairwise concepts X and Y from two taxonomies using five basic set relations: congruence (X=Y), inclusion (X>Y), inverse inclusion (X<Y), overlap (X><Y), and disjointness (X!Y). With some of the RCC-5 relationships among the Fabaceae family (beans family) and the Sapindaceae family (maple family) uncertain, we anticipate that the merging of the two classification systems will lead to numerous merged solutions, so- called possible worlds. Our research demonstrates how logic-based alignment with ambiguities can lead to multiple merged solutions, which would not have been feasible when aligning taxonomies, classifications, or other knowledge or- ganization systems (KOS) manually. We believe that this work can introduce a novel approach for aligning KOS, where merged possible worlds can serve as a minimum viable product for engaging domain experts in the loop. Keywords: taxonomy alignment, KOS alignment, interoperability 1 Introduction With the advent of large-scale technologies and datasets, it has become increasingly difficult to organize information using a stable unitary classification scheme over time. -
(Balsaminaceae) Using Chloroplast Atpb-Rbcl Spacer Sequences
Systematic Botany (2006), 31(1): pp. 171–180 ᭧ Copyright 2006 by the American Society of Plant Taxonomists Phylogenetics of Impatiens and Hydrocera (Balsaminaceae) Using Chloroplast atpB-rbcL Spacer Sequences STEVEN JANSSENS,1,4 KOEN GEUTEN,1 YONG-MING YUAN,2 YI SONG,2 PHILIPPE KU¨ PFER,2 and ERIK SMETS1,3 1Laboratory of Plant Systematics, Institute of Botany and Microbiology, Kasteelpark Arenberg 31, B-3001 Leuven, Belgium; 2Institut de Botanique, Universite´ de Neuchaˆtel, Neuchaˆtel, Switzerland; 3Nationaal Herbarium Nederland, Universiteit Leiden Branch, PO Box 9514, 2300 RA Leiden, The Netherlands 4Author for correspondence ([email protected]) ABSTRACT. Balsaminaceae are a morphologically diverse family with ca. 1,000 representatives that are mainly distributed in the Old World tropics and subtropics. To understand the relationships of its members, we obtained chloroplast atpB-rbcL sequences from 86 species of Balsaminaceae and five outgroups. Phylogenetic reconstructions using parsimony and Bayesian approaches provide a well-resolved phylogeny in which the sister group relationship between Impatiens and Hydrocera is confirmed. The overall topology of Impatiens is strongly supported and is geographically structured. Impatiens likely origi- nated in South China from which it colonized the adjacent regions and afterwards dispersed into North America, Africa, India, the Southeast Asian peninsula, and the Himalayan region. Balsaminaceae are annual or perennial herbs with in the intrageneric relationships of Impatiens. The most flowers that exhibit a remarkable diversity. The family recent molecular intrageneric study on Balsaminaceae consists of more than 1,000 species (Grey-Wilson utilized Internal Transcribed Spacer (ITS) sequences 1980a; Clifton 2000), but only two genera are recog- and provided new phylogenetic insights in Impatiens nized. -
Chromosome Numbers in the Polemoniaceae Representatives Of
1937 171 Chromosome Numbers in the Polemoniaceae By Walter S. Flory Division of Horticulture, Texas Agricultural Experiment Station This family is divided by systematists into two subfamilies. Cobaeoideae is composed of the genera Cantua, Huthia, and Cobaea which are tall shrubs, trees, or vines. The approximately fourteen other (herbaceous or low shrubby) genera comprise the subfamily Polemonioideae. From the standpoint of number of included species the most important of these latter genera are Gilia, Phlox, Polemo nium, and Collomia. The genera Phlox and Polemonium are each quite distinct and their species are seldom confused with those of other genera, but the remaining twelve genera of this subfamily apparently do not have taxonomic boundaries of equivalent distinctness. Certain species have been placed in one genus by one author, and in one or more different genera by others. The genus Gilia has been ex tended by some writers to include practically all species of the Polemonioideae outside of the genera Phlox and Polemonium. This was first pointed out to me by Professor Edgar T. Wherry who is making a taxonomic and geographic study of the Polemoniaceae, and was increasingly emphasized as literature sources and herbarium specimens were consulted and examined. It has been the purpose of the work herein presented to secure data on all obtainable polemoniaceous species with respect to chro mosome numbers, size, and general morphology. Especial attention has been given to securing information of significance from a taxono mic standpoint. Since several factors combine to make the immedi ate completion of the original program impossible it seems desirable, meanwhile, to present the accumulated data, together with suggested conclusions. -
Scientific Program
Aquatttiiic and Wetttllland Plllanttts::: Wettt & Wiiillld Jullly 26---31,,, 2003 Mobiiillle,,, Alllabama www...botttany2003...org SCIENTIFIC PROGRAM SATURDAY, JULY 26 7:00 PM – 10:00 PM Adam’s Mark, River Room MEETING: BSA Executive Committee Presiding: SCOTT D. RUSSELL, Department of Botany and Microbiology, 770 Van Vleet Oval, University of Oklahoma, Norman, OK 73019-0245. Tele: (405) 325-6234, E-mail: [email protected]. SUNDAY, JULY 27 8:30 AM – 4:00 PM Adam’s Mark, Dauphin MEETING: ASPT COUNCIL Presiding: LYNN G. CLARK, Department of Botany, Iowa State University, Ames, IA 50011-1020. Tele: (515) 294-8218, E-mail: [email protected]. 9:00 AM – 11:00 AM Adam’s Mark, Church MEETING: BSA Financial Advisory Committee Presiding: HARRY T. HORNER, Department of Botany, Iowa State University, Ames, IA 50011-1020. Tele: 515-294-8635, E-mail: [email protected]. 11:30 AM – 1:00 PM Adam’s Mark, Church MEETING: BSA New Committee Chair Meeting Presiding: LINDA E. GRAHAM, Department of Botany, 211 Birge Hall, University of Wisconsin, Madison, WI 53706. Tele: (608) 262-2640, Fax: (608) 262-7509, E-mail: [email protected]; and WILLIAM DAHL, Botanical Society of America, 4468-74 Castleman Avenue, St. Louis, MO 63166- 0299, Tele: (314) 577-9566, E-mail: [email protected]. 1:00 PM – 5:00 PM Adam’s Mark, De Tonti MEETING: BSA Council Presiding: SCOTT D. RUSSELL, Department of Botany and Microbiology, 770 Van Vleet Oval, University of Oklahoma, Norman, OK 73019-0245. Tele: (405) 325-6234, E-mail: [email protected]. BOTANY 2003 – Scientific Program 1 June 12, 2003 draft – please check final printed version, as rooms and times may change. -
Preparing the Shaanxi-Qinling Mountains Integrated Ecosystem Management Project (Cofinanced by the Global Environment Facility)
Technical Assistance Consultant’s Report Project Number: 39321 June 2008 PRC: Preparing the Shaanxi-Qinling Mountains Integrated Ecosystem Management Project (Cofinanced by the Global Environment Facility) Prepared by: ANZDEC Limited Australia For Shaanxi Province Development and Reform Commission This consultant’s report does not necessarily reflect the views of ADB or the Government concerned, and ADB and the Government cannot be held liable for its contents. (For project preparatory technical assistance: All the views expressed herein may not be incorporated into the proposed project’s design. FINAL REPORT SHAANXI QINLING BIODIVERSITY CONSERVATION AND DEMONSTRATION PROJECT PREPARED FOR Shaanxi Provincial Government And the Asian Development Bank ANZDEC LIMITED September 2007 CURRENCY EQUIVALENTS (as at 1 June 2007) Currency Unit – Chinese Yuan {CNY}1.00 = US $0.1308 $1.00 = CNY 7.64 ABBREVIATIONS ADB – Asian Development Bank BAP – Biodiversity Action Plan (of the PRC Government) CAS – Chinese Academy of Sciences CASS – Chinese Academy of Social Sciences CBD – Convention on Biological Diversity CBRC – China Bank Regulatory Commission CDA - Conservation Demonstration Area CNY – Chinese Yuan CO – company CPF – country programming framework CTF – Conservation Trust Fund EA – Executing Agency EFCAs – Ecosystem Function Conservation Areas EIRR – economic internal rate of return EPB – Environmental Protection Bureau EU – European Union FIRR – financial internal rate of return FDI – Foreign Direct Investment FYP – Five-Year Plan FS – Feasibility