Aetiology and Pathogenesis of Cutaneous Melanoma: Current Concepts and Advances
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Deregulated Gene Expression Pathways in Myelodysplastic Syndrome Hematopoietic Stem Cells
Leukemia (2010) 24, 756–764 & 2010 Macmillan Publishers Limited All rights reserved 0887-6924/10 $32.00 www.nature.com/leu ORIGINAL ARTICLE Deregulated gene expression pathways in myelodysplastic syndrome hematopoietic stem cells A Pellagatti1, M Cazzola2, A Giagounidis3, J Perry1, L Malcovati2, MG Della Porta2,MJa¨dersten4, S Killick5, A Verma6, CJ Norbury7, E Hellstro¨m-Lindberg4, JS Wainscoat1 and J Boultwood1 1LRF Molecular Haematology Unit, NDCLS, John Radcliffe Hospital, Oxford, UK; 2Department of Hematology Oncology, University of Pavia Medical School, Fondazione IRCCS Policlinico San Matteo, Pavia, Italy; 3Medizinische Klinik II, St Johannes Hospital, Duisburg, Germany; 4Division of Hematology, Department of Medicine, Karolinska Institutet, Stockholm, Sweden; 5Department of Haematology, Royal Bournemouth Hospital, Bournemouth, UK; 6Albert Einstein College of Medicine, Bronx, NY, USA and 7Sir William Dunn School of Pathology, University of Oxford, Oxford, UK To gain insight into the molecular pathogenesis of the the World Health Organization.6,7 Patients with refractory myelodysplastic syndromes (MDS), we performed global gene anemia (RA) with or without ringed sideroblasts, according to expression profiling and pathway analysis on the hemato- poietic stem cells (HSC) of 183 MDS patients as compared with the the French–American–British classification, were subdivided HSC of 17 healthy controls. The most significantly deregulated based on the presence or absence of multilineage dysplasia. In pathways in MDS include interferon signaling, thrombopoietin addition, patients with RA with excess blasts (RAEB) were signaling and the Wnt pathways. Among the most signifi- subdivided into two categories, RAEB1 and RAEB2, based on the cantly deregulated gene pathways in early MDS are immuno- percentage of bone marrow blasts. -
Head and Neck Mucosal Melanoma
www.melanomafocus.com Head and Neck Mucosal Melanoma Information for patients and carers Introduction Head and Neck The information in this leaflet relates specifically to melanomas of the head Mucosal and neck mucous membranes. The leaflet summarises a guideline (melanomafocus. Melanoma com/activities/mucosal-guidelines/mucosal- melanoma-resources) developed by experts in the field to advise cancer specialists who treat patients with this condition and is based upon the best evidence available. Skin What is it? cancers can also develop in the same areas of Melanoma develops if there is uncontrolled These melanomas are different in several the body, in the skin rather than in the mucous growth of melanocytes, the cells responsible ways from skin melanomas. For example, membranes. These are known as cutaneous for pigmenting (darkening) the skin. Mucosal while the risk of getting skin melanoma is melanomas and are not covered by this melanoma is a kind of melanoma that increased by too much exposure to the sun, guideline. If you have been diagnosed with occurs in mucous membranes. These are there appears to be no link between sunlight a skin (cutaneous) melanoma please refer to the moist surfaces that line cavities within and mucosal melanomas. No specific causes the NICE guideline (nice.org.uk/guidance/ the body. Mucosal melanomas can occur in or links with lifestyle have been found for ng14) and the other organisations listed at the the mouth (oral mucosal melanoma), nasal mucosal melanoma and as far as we know end of this leaflet. passages (sinonasal mucosal melanoma) there is nothing you can do to prevent it. -
Systematic Screening for Potential Therapeutic Targets in Osteosarcoma Through a Kinome-Wide CRISPR-Cas9 Library
Cancer Biol Med 2020. doi: 10.20892/j.issn.2095-3941.2020.0162 ORIGINAL ARTICLE Systematic screening for potential therapeutic targets in osteosarcoma through a kinome-wide CRISPR-Cas9 library Yuanzhong Wu*, Liwen Zhou*, Zifeng Wang, Xin Wang, Ruhua Zhang, Lisi Zheng, Tiebang Kang Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangzhou 510060, China ABSTRACT Objective: Osteosarcoma is the most common primary malignant bone tumor. However, the survival of patients with osteosarcoma has remained unchanged during the past 30 years, owing to a lack of efficient therapeutic targets. Methods: We constructed a kinome-targeting CRISPR-Cas9 library containing 507 kinases and 100 nontargeting controls and screened the potential kinase targets in osteosarcoma. The CRISPR screening sequencing data were analyzed with the Model-based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK) Python package. The functional data were applied in the 143B cell line through lenti-CRISPR-mediated gene knockout. The clinical significance of kinases in the survival of patients with osteosarcoma was analyzed in the R2: Genomics Analysis and Visualization Platform. Results: We identified 53 potential kinase targets in osteosarcoma. Among these targets, we analyzed 3 kinases, TRRAP, PKMYT1, and TP53RK, to validate their oncogenic functions in osteosarcoma. PKMYT1 and TP53RK showed higher expression in osteosarcoma than in normal bone tissue, whereas TRRAP showed no significant difference. High expression of all 3 kinases was associated with relatively poor prognosis in patients with osteosarcoma. Conclusions: Our results not only offer potential therapeutic kinase targets in osteosarcoma but also provide a paradigm for functional genetic screening by using a CRISPR-Cas9 library, including target design, library construction, screening workflow, data analysis, and functional validation. -
Sinonasal Neoplasms Mohit Agarwal, MD,* and Bruno Policeni, MD†
Sinonasal Neoplasms Mohit Agarwal, MD,* and Bruno Policeni, MD† Introduction benign lesions will usually cause bone remodeling and/or scle- rosis. Loss of bright fat marrow intensity on T1W MR images f Rip Van Winkle went to medical school during the 80s is a sign of bone involvement. Differentiation of benign vs I and woke up today among a meeting of pathologists, he malignant lesions remains a challenge with imaging and excep- would think he was on a different planet and listening to an tions to the previously mentioned features exist. Pathology is “ ” alien language. The once pink and purple world of pathol- required to determine the diagnosis in the majority of cases.7 ogy is now extensively multicolored with an overwhelming Imaging has more to offer than just histological diagnosis, number of immunostains and molecular markers. Histologi- the most important of which is tumor mapping. It must be cal diagnoses now come with an alphanumeric tail, each determined if the tumor is confined within a single sinus or implying the unique gene expression associated with that if there is extension into surrounding structures. Tumors of tumor entity. Needless to say, similar things have happened the maxillary sinuses can extend to the anterior ethmoid fi to the new fourth edition WHO classi cation of sinonasal sinus, nasal cavity, and orbit. Anterior ethmoid tumors can fi (SN) neoplasms, where SMARC B1-de cient carcinoma, involve the frontal sinuses and the nasal cavity. Nasal cavity Nuclear protein testis (NUT) midline carcinoma, and human tumors commonly involve the ethmoid sinus. Posterior eth- papilloma virus (HPV)-related multiphenotypic SN carci- moid tumors tend to involve the sphenoid sinus.7 1 noma have found a place. -
Profiling Data
Compound Name DiscoveRx Gene Symbol Entrez Gene Percent Compound Symbol Control Concentration (nM) JNK-IN-8 AAK1 AAK1 69 1000 JNK-IN-8 ABL1(E255K)-phosphorylated ABL1 100 1000 JNK-IN-8 ABL1(F317I)-nonphosphorylated ABL1 87 1000 JNK-IN-8 ABL1(F317I)-phosphorylated ABL1 100 1000 JNK-IN-8 ABL1(F317L)-nonphosphorylated ABL1 65 1000 JNK-IN-8 ABL1(F317L)-phosphorylated ABL1 61 1000 JNK-IN-8 ABL1(H396P)-nonphosphorylated ABL1 42 1000 JNK-IN-8 ABL1(H396P)-phosphorylated ABL1 60 1000 JNK-IN-8 ABL1(M351T)-phosphorylated ABL1 81 1000 JNK-IN-8 ABL1(Q252H)-nonphosphorylated ABL1 100 1000 JNK-IN-8 ABL1(Q252H)-phosphorylated ABL1 56 1000 JNK-IN-8 ABL1(T315I)-nonphosphorylated ABL1 100 1000 JNK-IN-8 ABL1(T315I)-phosphorylated ABL1 92 1000 JNK-IN-8 ABL1(Y253F)-phosphorylated ABL1 71 1000 JNK-IN-8 ABL1-nonphosphorylated ABL1 97 1000 JNK-IN-8 ABL1-phosphorylated ABL1 100 1000 JNK-IN-8 ABL2 ABL2 97 1000 JNK-IN-8 ACVR1 ACVR1 100 1000 JNK-IN-8 ACVR1B ACVR1B 88 1000 JNK-IN-8 ACVR2A ACVR2A 100 1000 JNK-IN-8 ACVR2B ACVR2B 100 1000 JNK-IN-8 ACVRL1 ACVRL1 96 1000 JNK-IN-8 ADCK3 CABC1 100 1000 JNK-IN-8 ADCK4 ADCK4 93 1000 JNK-IN-8 AKT1 AKT1 100 1000 JNK-IN-8 AKT2 AKT2 100 1000 JNK-IN-8 AKT3 AKT3 100 1000 JNK-IN-8 ALK ALK 85 1000 JNK-IN-8 AMPK-alpha1 PRKAA1 100 1000 JNK-IN-8 AMPK-alpha2 PRKAA2 84 1000 JNK-IN-8 ANKK1 ANKK1 75 1000 JNK-IN-8 ARK5 NUAK1 100 1000 JNK-IN-8 ASK1 MAP3K5 100 1000 JNK-IN-8 ASK2 MAP3K6 93 1000 JNK-IN-8 AURKA AURKA 100 1000 JNK-IN-8 AURKA AURKA 84 1000 JNK-IN-8 AURKB AURKB 83 1000 JNK-IN-8 AURKB AURKB 96 1000 JNK-IN-8 AURKC AURKC 95 1000 JNK-IN-8 -
Melanoma Review
Philip J. Bergman DVM, MS, PhD Diplomate ACVIM-Oncology Director, Clinical Studies, VCA Antech Medical Director, Katonah-Bedford Veterinary Center (#893) 546 North Bedford Rd., Bedford Hills, NY 10507 Office 914-241-7700, Fax 914-241-7708 Adjunct Associate, Memorial Sloan-Kettering Cancer Center, NYC MELANOMA REVIEW Melanomas in dogs have extremely diverse biologic behaviors depending on a variety of factors. A greater understanding of these factors significantly helps the clinician to delineate in advance the appropriate staging, prognosis and treatments. The primary factors which determine the biologic behavior of a melanoma in a dog are site, size, stage and histologic parameters. Unfortunately, even with an understanding of all of these factors, there will be occasional melanomas which have an unreliable biologic behavior; hence the desperate need for additional research into this relatively common (~ 4% of all canine tumors), heterogeneous, but frequently extremely malignant tumor. This review will assume the diagnosis of melanoma has already been made, which in of itself can be fraught with difficulty, and will focus on the aforementioned biologic behavior parameters, the staging and the treatment of canine melanoma. Biologic Behavior The biologic behavior of canine melanoma is extremely variable and best characterized based on anatomic site, size, stage and histologic parameters. On divergent ends of the spectrum would be a 0.5 cm haired-skin melanoma with an extremely low grade likely to be cured with simple surgical removal vs. a 5.0 cm high-grade malignant oral melanoma with a poor-grave prognosis. Similar to the development of a rational staging, prognostic and therapeutic plan for any tumor, two primary questions must be answered; what is the local invasiveness of the tumor and what is the metastatic propensity? The answers to these questions will determine the prognosis, and to be discussed later, the treatment. -
Oral Pathology
Oral Pathology Palatal blue nevus in a child Catherine M. Flaitz DDS, MS Georgeanne McCandless DDS Dr. Flaitz is professor, Oral and Maxillofacial Pathology and Pediatric Dentistry, Department of Stomatology, University of Texas at Houston Health Science Center Dental Branch; Dr. McCandless has a private practice in The Woodlands, TX. Correspond with Dr. Flaitz at [email protected] Abstract The intraoral blue nevus occurs infrequently in children. This by the labial mucosa (1). Intraoral lesions have a predilection case report describes the clinical features of an acquired blue ne- for females in the third and fourth decades, in contrast to cu- vus in a 7 year-old girl that involved the palatal mucosa. A taneous lesions that normally develop in children. In large differential diagnosis and justification for surgical excision of this biopsy series, only 2% of the oral blue nevi are diagnosed in oral lesion are discussed. (Pediatr Dent 23:354-355, 2001) children and adolescents (1). Similar to their cutaneous coun- terpart, most oral lesions are acquired; however, there are ith the exception of vascular entities, neoplastic isolated reports of congenital examples. lesions with a blue discoloration are an unusual find Clinically, most lesions present as a solitary blue, gray or Wing in children. Although the blue nevus is a blue-black macule or slightly raised nodule that measures less relatively common finding of the skin in the pediatric popula- than 6 mm in size. The margins are often regular but indis- tion, only a few intraoral examples are documented in the tinct and the surface is smooth. -
Circrna-006258 Sponge-Adsorbs Mir-574-5P to Regulate Cell Growth and Milk Synthesis Via EVI5L in Goat Mammary Epithelial Cells
G C A T T A C G G C A T genes Article CircRNA-006258 Sponge-Adsorbs miR-574-5p to Regulate Cell Growth and Milk Synthesis via EVI5L in Goat Mammary Epithelial Cells Meng Zhang y , Li Ma y, Yuhan Liu, Yonglong He, Guang Li, Xiaopeng An and Binyun Cao * College of Animal Science and Technology, Northwest A&F University, Yangling 712100, Shanxi, China; [email protected] (M.Z.); [email protected] (L.M.); [email protected] (Y.L.); [email protected] (Y.H.); [email protected] (G.L.); [email protected] (X.A.) * Correspondence: [email protected]; Tel.: +86-29-87092102 These authors contributed equally to this work. y Received: 28 May 2020; Accepted: 25 June 2020; Published: 28 June 2020 Abstract: The development of the udder and the milk yield are closely related to the number and vitality of mammary epithelial cells. Many previous studies have proved that non-coding RNAs (ncRNAs) are widely involved in mammary gland development and the physiological activities of lactation. Our laboratory previous sequencing data revealed that miR-574-5p was differentially expressed during the colostrum and peak lactation stages, while the molecular mechanism of the regulatory effect of miR-574-5p on goat mammary epithelial cells (GMECs) is unclear. In this study, the targeting relationship was detected between miR-574-5p or ecotropic viral integration site 5-like (EVI5L) and circRNA-006258. The results declared that miR-574-5p induced the down-regulation of EVI5L expression at both the mRNA and protein levels, while circRNA-006258 relieved the inhibitory effect through adsorbing miR-574-5p. -
Melanomas Are Comprised of Multiple Biologically Distinct Categories
Melanomas are comprised of multiple biologically distinct categories, which differ in cell of origin, age of onset, clinical and histologic presentation, pattern of metastasis, ethnic distribution, causative role of UV radiation, predisposing germ line alterations, mutational processes, and patterns of somatic mutations. Neoplasms are initiated by gain of function mutations in one of several primary oncogenes, typically leading to benign melanocytic nevi with characteristic histologic features. The progression of nevi is restrained by multiple tumor suppressive mechanisms. Secondary genetic alterations override these barriers and promote intermediate or overtly malignant tumors along distinct progression trajectories. The current knowledge about pathogenesis, clinical, histological and genetic features of primary melanocytic neoplasms is reviewed and integrated into a taxonomic framework. THE MOLECULAR PATHOLOGY OF MELANOMA: AN INTEGRATED TAXONOMY OF MELANOCYTIC NEOPLASIA Boris C. Bastian Corresponding Author: Boris C. Bastian, M.D. Ph.D. Gerson & Barbara Bass Bakar Distinguished Professor of Cancer Biology Departments of Dermatology and Pathology University of California, San Francisco UCSF Cardiovascular Research Institute 555 Mission Bay Blvd South Box 3118, Room 252K San Francisco, CA 94158-9001 [email protected] Key words: Genetics Pathogenesis Classification Mutation Nevi Table of Contents Molecular pathogenesis of melanocytic neoplasia .................................................... 1 Classification of melanocytic neoplasms -
Clinical Characteristics of Malignant Melanoma in Central China and Predictors of Metastasis
1452 ONCOLOGY LETTERS 19: 1452-1464, 2020 Clinical characteristics of malignant melanoma in central China and predictors of metastasis KE SHI1, XURAN ZHU1, ZHONGYANG LIU1, NAN SUN1, LUOSHA GU1, YANG WEI1, XU CHENG1, ZEWEI ZHANG1, BAIHUI XIE1, SHUAIXI YANG2, GUANGSHUAI LI1 and LINBO LIU1 Departments of 1Plastic Surgery and 2Anorectal Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450052, P.R. China Received November 5, 2018; Accepted November 13, 2019 DOI: 10.3892/ol.2019.11219 Abstract. Cutaneous malignant melanoma (MM) is the Introduction most malignant type of all skin neoplasms. There is wide variability in the characteristics of MM between patients of Malignant melanoma (MM) is a highly aggressive cancer different races. The aim of the present study was to investigate derived from neural crest melanocytes and occurs most the clinicopathological characteristics of patients with MM in frequently in the skin, digestive tract, eyes, genitals and nasal central China and to assess the value of specific hematological cavity (1-3) The prognosis of patients with MM is poor and and biochemical indices for predicting metastasis. The data the 5-year survival is reported to be <20% (4). Each year, of 167 patients with MM from the First Affiliated Hospital ~20,000 cases of cutaneous MM are reported in China and of Zhengzhou University (Henan, China) were retrospectively the incidence is growing by 3-5% per year (5). The incidence analyzed and compared with the data of patients with MM of MM is lower in China compared with Western countries, available from cBioPortal for Cancer Genomics. Following but survival is shorter in Chinese patients (6,7). -
Mucosal Melanoma: a Clinically and Biologically Unique Disease Entity
Focused 345 Review Mucosal Melanoma: A Clinically and Biologically Unique Disease Entity Richard D. Carvajal, MDa; Sharon A. Spencer, MDb; and William Lydiatt, MD,c New York, New York; Birmingham, Alabama; and Omaha, Nebraska Key Words of these arise from mucosal surfaces.1–3 Despite a com- Mucosal melanoma, melanoma of the head and neck, anorectal mon cell of origin, MM is a clinical and pathologic entity melanoma, vulvovaginal melanoma, KIT distinct from its more common cutaneous counterpart. MM can arise from any mucosal surface of the body, with Abstract 55% arising from the head and neck, 24% from the ano- Mucosal melanoma (MM) is an aggressive and clinically complex 2 malignancy made more challenging by its relative rarity. Because rectal mucosa, and 18% from the vulvovaginal mucosa. of the rarity of MM as a whole, and because of the unique biology Disease arising from the mucosa of the pharynx, larynx, and clinical challenges of MM arising from each anatomic location, urinary tract, cervix, esophagus, gallbladder, or other mu- understanding of this disease and its optimal management remains cosal sites is less common. limited. The impact of various treatment strategies on disease con- This article summarizes the clinical, pathologic, and trol and survival has been difficult to assess because of the small size of most reported series of MM arising from any one particular site, molecular features, and the diagnostic and therapeutic the retrospective nature of most series, and the lack of a uniform considerations for the management of MM, underscoring comprehensive staging system for this disease. This article summa- the similarities and differences from cutaneous melanoma rizes the clinical, pathologic, and molecular features, and the diag- (CM). -
Lymphatic Invasion and Angiotropism in Primary Cutaneous Melanoma Andrea P Moy, Lyn M Duncan and Stefan Kraft
Laboratory Investigation (2017) 97, 118–129 © 2017 USCAP, Inc All rights reserved 0023-6837/17 $32.00 PATHOBIOLOGY IN FOCUS Lymphatic invasion and angiotropism in primary cutaneous melanoma Andrea P Moy, Lyn M Duncan and Stefan Kraft Access of melanoma cells to the cutaneous vasculature either via lymphatic invasion or angiotropism is a proposed mechanism for metastasis. Lymphatic invasion is believed to be a mechanism by which melanoma cells can disseminate to regional lymph nodes and to distant sites and may be predictive of adverse outcomes. Although it can be detected on hematoxylin- and eosin-stained sections, sensitivity is markedly improved by immunohistochemistry for lymphatic endothelial cells. Multiple studies have reported a significant association between the presence of lymphatic invasion and sentinel lymph node metastasis and survival. More recently, extravascular migratory metastasis has been suggested as another means by which melanoma cells can spread. Angiotropism, the histopathologic correlate of extravascular migratory metastasis, has also been associated with melanoma metastasis and disease recurrence. Although lymphatic invasion and angiotropism are not currently part of routine melanoma reporting, the detection of these attributes using ancillary immunohistochemical stains may be useful in therapeutic planning for patients with melanoma. Laboratory Investigation (2017) 97, 118–129; doi:10.1038/labinvest.2016.131; published online 19 December 2016 Primary cutaneous melanoma has a propensity for metastasis, However,