High Expression of KIF14 in Retinoblastoma: Association with Older Age at Diagnosis
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Global Retinoblastoma Presentation and Analysis by National Income Level
Research JAMA Oncology | Original Investigation Global Retinoblastoma Presentation and Analysis by National Income Level Global Retinoblastoma Study Group Supplemental content IMPORTANCE Early diagnosis of retinoblastoma, the most common intraocular cancer, can save both a child’s life and vision. However, anecdotal evidence suggests that many children across the world are diagnosed late. To our knowledge, the clinical presentation of retinoblastoma has never been assessed on a global scale. OBJECTIVES To report the retinoblastoma stage at diagnosis in patients across the world during a single year, to investigate associations between clinical variables and national income level, and to investigate risk factors for advanced disease at diagnosis. DESIGN, SETTING, AND PARTICIPANTS A total of 278 retinoblastoma treatment centers were recruited from June 2017 through December 2018 to participate in a cross-sectional analysis of treatment-naive patients with retinoblastoma who were diagnosed in 2017. MAIN OUTCOMES AND MEASURES Age at presentation, proportion of familial history of retinoblastoma, and tumor stage and metastasis. RESULTS The cohort included 4351 new patients from 153 countries; the median age at diagnosis was 30.5 (interquartile range, 18.3-45.9) months, and 1976 patients (45.4%) were female. Most patients (n = 3685 [84.7%]) were from low- and middle-income countries (LMICs). Globally, the most common indication for referral was leukocoria (n = 2638 [62.8%]), followed by strabismus (n = 429 [10.2%]) and proptosis (n = 309 [7.4%]). Patients from high-income countries (HICs) were diagnosed at a median age of 14.1 months, with 656 of 666 (98.5%) patients having intraocular retinoblastoma and 2 (0.3%) having metastasis. -
Investigation of the Underlying Hub Genes and Molexular Pathogensis in Gastric Cancer by Integrated Bioinformatic Analyses
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.20.423656; this version posted December 22, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Investigation of the underlying hub genes and molexular pathogensis in gastric cancer by integrated bioinformatic analyses Basavaraj Vastrad1, Chanabasayya Vastrad*2 1. Department of Biochemistry, Basaveshwar College of Pharmacy, Gadag, Karnataka 582103, India. 2. Biostatistics and Bioinformatics, Chanabasava Nilaya, Bharthinagar, Dharwad 580001, Karanataka, India. * Chanabasayya Vastrad [email protected] Ph: +919480073398 Chanabasava Nilaya, Bharthinagar, Dharwad 580001 , Karanataka, India bioRxiv preprint doi: https://doi.org/10.1101/2020.12.20.423656; this version posted December 22, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract The high mortality rate of gastric cancer (GC) is in part due to the absence of initial disclosure of its biomarkers. The recognition of important genes associated in GC is therefore recommended to advance clinical prognosis, diagnosis and and treatment outcomes. The current investigation used the microarray dataset GSE113255 RNA seq data from the Gene Expression Omnibus database to diagnose differentially expressed genes (DEGs). Pathway and gene ontology enrichment analyses were performed, and a proteinprotein interaction network, modules, target genes - miRNA regulatory network and target genes - TF regulatory network were constructed and analyzed. Finally, validation of hub genes was performed. The 1008 DEGs identified consisted of 505 up regulated genes and 503 down regulated genes. -
2016-2017 Indian Institute of Technology Madras
Indian Institute of Technology Madras 2016-2017 No. 1 Engineering Institute in the Country for 2016, 2017 & 2018 As per National Institutional Ranking Framework, MHRD, Govt. of India CoNtents YEAR AT A GLANCE 2 DIRECTOR’S REPORT 4 ADMINISTRATION 20 ACADEMIC PROGRAMMES AND AWARD OF DEGREES 24 DEPARTMENTS CENTRES OF SPECIAL FACILITIES DEPARTMENT OF AEROSPACE ENGINEERING 34 CENTRE FOR INDUSTRIAL CONSULTANCY & SPONSORED RESEARCH 68 DEPARTMENT OF APPLIED MECHANICS 36 CENTRE FOR CONTINUING EDUCATION 70 DEPARTMENT OF BIOTECHNOLOgy 38 P.G. SENAPATHY CENTRE FOR COMPUTING RESOURCES 71 DEPARTMENT OF CHEMISTRY 40 CENTRAL ELECTRONICS CENTRE 72 DEPARTMENT OF CHEMICAL ENGINEERING 42 SOPHISTICATED ANALYTICAL INSTRUMENT FACILITY 73 DEPARTMENT OF CIVIL ENGINEERING 44 CENTRAL FACILITIES 74 DEPARTMENT OF COMPUTER SCIENCE AND ENGINEERING 46 CENTRAL LIBRARY 75 DEPARTMENT OF ELECTRICAL ENGINEERING 48 STUDENTS AMENITIES & ACTIVITIES 76 DEPARTMENT OF ENGINEERING DESIGN 50 INTERNATIONAL & ALUMNI RELATIONS 78 DEPARTMENT OF HUMANITIES AND SOCIAL SCIENCES 52 CENTRES OF EXCELLENCE 80 DEPARTMENT OF MANAGEMENT STUDIES 54 STUDENTS PLACEMENT 81 DEPARTMENT OF MATHEMATICS 56 FINANCIAL ASSISTANCE TO STUDENTS 82 DEPARTMENT OF MECHANICAL ENGINEERING 58 FINANCE & ACCOUNTS 84 DEPARTMENT OF METALLURGICAL AND MATERIALS ENGINEERING 60 CAMPUS AMENITIES 86 DEPARTMENT OF OCEAN ENGINEERING 62 DEPARTMENT OF PHYSICS 64 Year Book 2016–17 1 YEAR At A GlANCE UG Students on roll 1982 465 UG Admissions PG Students on roll 4431 1316 PG Admissions Research Scholars on roll 2767 494 Research -
Molecular Genetics of Microcephaly Primary Hereditary: an Overview
brain sciences Review Molecular Genetics of Microcephaly Primary Hereditary: An Overview Nikistratos Siskos † , Electra Stylianopoulou †, Georgios Skavdis and Maria E. Grigoriou * Department of Molecular Biology & Genetics, Democritus University of Thrace, 68100 Alexandroupolis, Greece; [email protected] (N.S.); [email protected] (E.S.); [email protected] (G.S.) * Correspondence: [email protected] † Equal contribution. Abstract: MicroCephaly Primary Hereditary (MCPH) is a rare congenital neurodevelopmental disorder characterized by a significant reduction of the occipitofrontal head circumference and mild to moderate mental disability. Patients have small brains, though with overall normal architecture; therefore, studying MCPH can reveal not only the pathological mechanisms leading to this condition, but also the mechanisms operating during normal development. MCPH is genetically heterogeneous, with 27 genes listed so far in the Online Mendelian Inheritance in Man (OMIM) database. In this review, we discuss the role of MCPH proteins and delineate the molecular mechanisms and common pathways in which they participate. Keywords: microcephaly; MCPH; MCPH1–MCPH27; molecular genetics; cell cycle 1. Introduction Citation: Siskos, N.; Stylianopoulou, Microcephaly, from the Greek word µικρoκεϕαλi´α (mikrokephalia), meaning small E.; Skavdis, G.; Grigoriou, M.E. head, is a term used to describe a cranium with reduction of the occipitofrontal head circum- Molecular Genetics of Microcephaly ference equal, or more that teo standard deviations -
CTRI Trial Data
PDF of Trial CTRI Website URL - http://ctri.nic.in Clinical Trial Details (PDF Generation Date :- Wed, 29 Sep 2021 03:01:46 GMT) CTRI Number CTRI/2009/091/000298 [Registered on: 16/07/2009] - Last Modified On 26/09/2014 Post Graduate Thesis No Type of Trial Interventional Type of Study Vaccine Other (Specify) [Pilot study to study the safety and immunogenicity of Merck Quadrivalent HPV vaccine] Study Design Single Arm Trial Public Title of Study A clinical trial to study prevention of HPV in HIV-Positive women in India Scientific Title of A Single-Arm, Open-Label, Pilot Study of the Safety and Immunogenicity of the Merck Quadrivalent Study Human Papillomavirus Vaccine among HIV-Positive Women in India: A Trial of AIDS Malignancy Clinical Trials Consortium Acronym: AMC Protocol # 054 Secondary IDs if Any Secondary ID Identifier AMC-054 Version 9.0; May 4 2012 Protocol Number NCT00667563 ClinicalTrials.gov Details of Principal Details of Principal Investigator Investigator or overall Name Dr N Kumarasamy Trial Coordinator (multi-center study) Designation Principal Investigator Affiliation YR Gaitonde Medical Educational & Research Foundation Address YR Gaitonde Medical Educational & Research Foundation, Voluntary Health Services, Rajiv Gandhi Salai, Taramani Chennai TAMIL NADU 600113 India Phone 04439106789 Fax 04422542949 Email [email protected] Details Contact Details Contact Person (Scientific Query) Person (Scientific Name Dr N Kumarasamy Query) Designation Principal Investigator Affiliation YR Gaitonde Medical Educational & Research Foundation Address YR Gaitonde Medical Educational & Research Foundation, Voluntary Health Services, Rajiv Gandhi Salai, Taramani Chennai TAMIL NADU 600113 India Phone 04439106789 Fax 04422542949 Email [email protected] Details Contact Details Contact Person (Public Query) Person (Public Query) Name Sumeela Nair Designation Lead Data Manager Affiliation The EMMES Corporation Address EMMES Services Pvt. -
Narrative Notes on Plan Programmes Tam-N
y » I ; ^ t O M i T*' NARRATIVE NOTES ON PLAN PROGRAMMES ANNUAL PLAN 2000-01 STATE PLANNING COMMISSION CHENNAI - 600 005 - 5 * 4 8 2 3 0 < » - 2 5 - TAM-N AUGUST 2000 NARRATIVE NOTES ON PLAN PROGRAMMES 2000-01 NIEPA DC D11079 ' xA^\Q§ i , , .‘♦1 Zi. i-I. Mr:,-, ' 3 )-u o 79 V ^ ' ' Z4* - o 4"* Zc © I CONTENTS Page 1. Crop Husbandry 1 2. Research and Education 25 3. Food, Storage & WareHousing 30 4. Soil & Water Conservation 35 5. Animal Husbandry 41 6. Dairy Developnnent 50 7. Fisheries 53 8. Forests 61 9. Investment in Agri.Financial Institutions 69 10. Co-operation 71 11. Special Programme for Rural Development 75 12. Land Reforms 79 13. Community Development 80 14. Minor Irrigation 83 15. Command Area Development 88 16. Major, Medium Irrigation & Flood Control 90 17. Power Development 103 18. Non-Conventional Sources of Energy 111 19. Industries- Medium and Large 114 20. Village and Small Industries 130 21. Weights and Measures 142 22. Mining and Metallurgical Industries 143 23. Roads and Bridges 145 24. Road and Inland Water Transport 156 25. Scientific Services and Research 158 26. Ecology and Environment 163 27. Secretariat Economic Services 166 28. Tourism 171 29. Economic Advice and Statistics 175 30. Civil Supplies 179 31. General Education 184 CONTENTS—conf. Pagee 32. Technical Education 1988 33. Art and Culture 2011 34. Sports and Youth Services 207)7 35. Medical 21C0 36. Public Health 2188 37. Water Supply and Sanitation 2332 38. Housing 24ft6 39. Urban Development 2551 40. Information and Publicity 2558 41. -
Kif1b Interacts with KBP to Promote Axon Elongation by Localizing a Microtubule Regulator to Growth Cones
7014 • The Journal of Neuroscience, June 29, 2016 • 36(26):7014–7026 Development/Plasticity/Repair Kif1B Interacts with KBP to Promote Axon Elongation by Localizing a Microtubule Regulator to Growth Cones Catherine M. Drerup, XSarah Lusk, and Alex Nechiporuk Department of Cell, Developmental, & Cancer Biology, Oregon Health & Science University, Portland, Oregon 97239 Delivery of proteins and organelles to the growth cone during axon extension relies on anterograde transport by kinesin motors. Though critical for neural circuit development, the mechanisms of cargo-specific anterograde transport during axon extension are only starting to be explored. Cargos of particular importance for axon outgrowth are microtubule modifiers, such as SCG10 (Stathmin-2). SCG10 is expressed solely during axon extension, localized to growth cones, and essential for axon outgrowth; however, the mechanisms of SCG10 transport and activity were still debated. Using zebrafish mutants and in vivo imaging, we identified the Kif1B motor and its interactor Kif1 binding protein (KBP) as critical for SCG10 transport to axon growth cones and complete axon extension. Axon truncation in kbpst23 mutants can be suppressed by SCG10 overexpression, confirming the direct relationship between decreased SCG10 levels and failed axon outgrowth. Live imaging revealed that the reduced levels of SCG10 in kbpst23 mutant growth cones led to altered microtubule stability, defining the mechanistic basis of axon truncation. Thus, our data reveal a novel role for the Kif1B-KBP complex in the anterograde transport of SCG10, which is necessary for proper microtubule dynamics and subsequent axon extension. Key words: axon extension; KBP; KIF1B; SCG10; stathmin Significance Statement Together, our data define the mechanistic underpinnings of failed axon outgrowth with loss of KBP or its associated motor, Kif1B. -
The Kinesin Superfamily Handbook Transporter, Creator, Destroyer
The Kinesin Superfamily Handbook Transporter, Creator, Destroyer Edited by Claire T. Friel First edition published 2020 ISBN: 978-1-138-58956-8 (hbk) ISBN: 978-0-429-49155-9 (ebk) 4 The Kinesin-3 Family Long-Distance Transporters Nida Siddiqui and Anne Straube CC BY-NC-ND 4.0 The Kinesin Superfamily Handbook The Kinesin-3 Family 4 Long-Distance Transporters Nida Siddiqui and Anne Straube CONTENTS 4.1 Example Family Members .............................................................................. 41 4.2 Structural Information .................................................................................... 41 4.3 Functional Properties ...................................................................................... 43 4.3.1 Autoinhibition of Kinesin-3 Motors and Their Activation .................45 4.4 Physiological Roles .........................................................................................46 4.4.1 Preference for Subsets of Microtubule Tracks .................................... 47 4.5 Involvement in Disease ...................................................................................48 Acknowledgements ..................................................................................................49 References ................................................................................................................49 The Kinesin-3s are a family of cargo transporters. They typically display highly processive plus-end-directed motion, either as dimers or in teams, formed via interaction with -
Microtubule-Associated Proteins As Targets in Cancer Chemotherapy Kumar M.R
Review Microtubule-Associated Proteins as Targets in Cancer Chemotherapy Kumar M.R. Bhat andVijayasaradhi Setaluri Abstract Natural and synthetic compounds that disrupt microtubule dynamics are among the most successful and widely used cancer chemotherapeutic agents. However,lack of reliable markers that predict sensitivity of cancers to these agents and development of resistance remain vexing issues. There is accumulating evidence that a family of cellular proteins that are associated with and alter the dynamics of microtubules can determine sensitivity of cancer cells to microtubule- targeting agents and play a role in tumor cell resistance to these agents. This growing family of microtubule-associated proteins (MAP) includes products of oncogenes,tumor suppressors, and apoptosis regulators,suggesting that alteration of microtubule dynamics may be one of the critical events in tumorigenesis and tumor progression. The objective of this review is to integrate the knowledge on these seemingly unrelated proteins that share a common function and examine their relevance to microtubule-targeting therapies and highlight MAPs-tubulin-drug interactions as a novel avenue for new drug discovery. Based on the available evidence,we propose that rational microtubule-targeting cancer therapeutic approaches should ideally include proteomic profiling of tumor MAPs before administration of microtubule-stabilizing/destabilizing agents preferentially in combination with agents that modulate the expression of relevant MAPs. Dynamic instability is an essential -
Supplementary Data
Supplementary Appendix Table of contents: Genes selected for real-time quantitative reverse transcriptase PCR………2 Table 1s: Microarrays results for genes selected for RQ-PCR…………….……...5 Table 2s: Gene list of TaqMan expression assays ……………………………...…6 Figure 1s: An example for a RQ-PCR matrix plate……………………………...….7 Figure 2s: Distribution of quantitative real time RT-PCR values before and after normalization for the various gene…………………………………………………….8 Table 3s: Distribution of means of quantitative real time RT-PCR values for the various genes………………………………………………………….………………….9 Table 4s: Summary of the ranks in Multivariate Cox Regression analysis of quantitative real time RT-PCR results (1- low, 2- medium, 3- high).....……………...………..………………………………………………………….9 Figure 3s: Microarrays results verification. Immunostaning with anti-CDH2.….10 Reference......……………...………..…………………………………...……………11 Genes selected for real-time quantitative reverse transcriptase PCR (RQ- PCR) We hypothesized that increased expression of certain genes in primary NSCLC could identify patients at high risk for the development of brain metastasis. The selection of genes for the RQ-PCR studies was based on results from our exploratory microarray gene expression profiling (GEP) studies (table 1s) [1, 2] and published data linking the expression of these genes either to metastasis (there was no published data on brain metastasis) or to survival in lung cancers or other non- hematological cancers. We focused on genes whose expression was higher either in primary NSCLC with brain metastasis and/or in brain metastasis compared with primary NSCLC. Our microarray study included 26 primary NSCLC (6 metastasized to the brain), 8 normal lungs, 7 brain metastases (not from the same primary NSCLC included in the arrays), and one pooled RNA from normal brain. -
The Activity of KIF14, Mieap, and EZR in a New Type of the Invasive Component, Torpedo-Like Structures, Predetermines the Metastatic Potential of Breast Cancer
cancers Article The Activity of KIF14, Mieap, and EZR in a New Type of the Invasive Component, Torpedo-Like Structures, Predetermines the Metastatic Potential of Breast Cancer Tatiana S. Gerashchenko 1 , Sofia Y. Zolotaryova 1, Artem M. Kiselev 1,2, Liubov A. Tashireva 3 , Nikita M. Novikov 1, Nadezhda V. Krakhmal 4, Nadezhda V. Cherdyntseva 5, Marina V. Zavyalova 3,4, Vladimir M. Perelmuter 3 and Evgeny V. Denisov 1,* 1 Laboratory of Cancer Progression Biology, Cancer Research Institute, Tomsk National Research Medical Center, Russian Academy of Sciences, 634009 Tomsk, Russia; [email protected] (T.S.G.); [email protected] (S.Y.Z.); [email protected] (A.M.K.); [email protected] (N.M.N.) 2 Institute of Cytology, Russian Academy of Sciences, 194064 Saint Petersburg, Russia 3 Department of General and Molecular Pathology, Cancer Research Institute, Tomsk National Research Medical Center, Russian Academy of Sciences, 634009 Tomsk, Russia; [email protected] (L.A.T.); [email protected] (M.V.Z.); [email protected] (V.M.P.) 4 Department of Pathological Anatomy, Siberian State Medical University, 634050 Tomsk, Russia; [email protected] 5 Laboratory of Molecular Oncology and Immunology, Cancer Research Institute, Tomsk National Research Medical Center, Russian Academy of Sciences, 634009 Tomsk, Russia; [email protected] * Correspondence: [email protected]; Tel.: +7-3822-282676 Received: 4 June 2020; Accepted: 13 July 2020; Published: 15 July 2020 Abstract: Intratumor morphological heterogeneity reflects patterns of invasive growth and is an indicator of the metastatic potential of breast cancer. In this study, we used this heterogeneity to identify molecules associated with breast cancer invasion and metastasis. -
Central Leather Research Institute, Adyar, Chennai- 600020
CENTRAL LEATHER RESEARCH INSTITUTE, ADYAR, CHENNAI- 600020 LIST OF APPROVED HOSPITALS AND ITS BRANCHES FOR HEALTH SERVICES BY CLRI AS ON 01-04-2019 REIMBURSEMENT AS PER CGHS RATES ONLY Sl. No Name of the Hospitals Address 1. Amrit Hospital Mint Street, Sowcarpet, Chennai - 79 2. Adyar P.M. Hospital & Research Centre Pvt. Ltd Lattice Bridge Rd, Adyar, Chennai - 20 3. Andhra Mahila Sabha R.A.Puram, Chennai - 28 4. Apollo Speciality Hospital – OMR Perungudi, Chennai - 96 5. Apollo Hospitals Enterprises Greams Road, Chennai - 6 6. Apollo Multispeciality Hospitals Teynampet, Chennai - 18 7. Appasamy Medicare Centre (P) Ltd Arumbakkam, Chennai - 106 8. Aswine Soundra Hospital and Research Centre Teynampet, Chennai - 18 9. Athipathy Hospital & Research Centre Velachery, Chennai - 42 10. Balaji Hospitals Private Ltd Guindy, Chennai - 32 11. Balakrishna Eye Hospital & Eye Research Centre Saidapet, Chennai - 15 12. Barathiraja Hospital and Research Centre Pvt. T.Nagar, Chennai - 17 Ltd 13. Beach Chennai Hospital New Washermanpet, Chennai - 81 14. Billroth Hospital Shenoy Nagar, Chennai - 30 15. BSS Hospital Mandaveli, Chennai - 28 16. Cancer Institute (WIA) Adyar, Chennai - 20 17. Chettinad Health City Kelambakkam, Chennai-603103 18. Child Trust Hospital Nungambakkam, Chennai - 34 19. Al-Saudi Clinical Services (Citi Hospital) Adyar, Chennai - 20 20. CSI Kalyani General Hospital Dr. R.K.Salai, Chennai - 4 21. CSI Rainy Multi Speciality Hospital 45, GA Road, Chennai - 21 22. Deepam Hospitals (P) Ltd West Tambaram, Chennai - 45 23. Chennai Meenakshi Multispeciality Hospital Mylapore, Chennai - 4 24. Chennai National Hospital Beach Lane, Chennai - 1 25. Dr. Agarwal Eye Hospital Cathedral Road, Chennai - 86 26. Dr. A.