(Rodentia: Muridae) in Fars Provin
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Interspecific Geographic Distribution and Variation of the Pathogens
Journal of Invertebrate Pathology xxx (2011) xxx–xxx Contents lists available at SciVerse ScienceDirect Journal of Invertebrate Pathology journal homepage: www.elsevier.com/locate/jip Interspecific geographic distribution and variation of the pathogens Nosema bombi and Crithidia species in United States bumble bee populations Nils Cordes a, Wei-Fone Huang b, James P. Strange c, Sydney A. Cameron d, Terry L. Griswold c, ⇑ Jeffrey D. Lozier e, Leellen F. Solter b, a University of Bielefeld, Evolutionary Biology, Morgenbreede 45, 33615 Bielefeld, Germany b Illinois Natural History Survey, Prairie Research Institute, University of Illinois, 1816 S. Oak St., Champaign, IL 61820, United States c USDA-ARS Pollinating Insects Research Unit, Utah State University, Logan, UT 84322-5310, United States d Department of Entomology and Institute for Genomic Biology, University of Illinois, Urbana, IL 61801, United States e Department of Biological Sciences, University of Alabama, Tuscaloosa, AL 35487, United States article info abstract Article history: Several bumble bee (Bombus) species in North America have undergone range reductions and rapid Received 4 September 2011 declines in relative abundance. Pathogens have been suggested as causal factors, however, baseline data Accepted 10 November 2011 on pathogen distributions in a large number of bumble bee species have not been available to test this Available online xxxx hypothesis. In a nationwide survey of the US, nearly 10,000 specimens of 36 bumble bee species collected at 284 sites were evaluated for the presence and prevalence of two known Bombus pathogens, the micros- Keywords: poridium Nosema bombi and trypanosomes in the genus Crithidia. Prevalence of Crithidia was 610% for all Bombus species host species examined but was recorded from 21% of surveyed sites. -
Mammals of Jordan
© Biologiezentrum Linz/Austria; download unter www.biologiezentrum.at Mammals of Jordan Z. AMR, M. ABU BAKER & L. RIFAI Abstract: A total of 78 species of mammals belonging to seven orders (Insectivora, Chiroptera, Carni- vora, Hyracoidea, Artiodactyla, Lagomorpha and Rodentia) have been recorded from Jordan. Bats and rodents represent the highest diversity of recorded species. Notes on systematics and ecology for the re- corded species were given. Key words: Mammals, Jordan, ecology, systematics, zoogeography, arid environment. Introduction In this account we list the surviving mammals of Jordan, including some reintro- The mammalian diversity of Jordan is duced species. remarkable considering its location at the meeting point of three different faunal ele- Table 1: Summary to the mammalian taxa occurring ments; the African, Oriental and Palaearc- in Jordan tic. This diversity is a combination of these Order No. of Families No. of Species elements in addition to the occurrence of Insectivora 2 5 few endemic forms. Jordan's location result- Chiroptera 8 24 ed in a huge faunal diversity compared to Carnivora 5 16 the surrounding countries. It shelters a huge Hyracoidea >1 1 assembly of mammals of different zoogeo- Artiodactyla 2 5 graphical affinities. Most remarkably, Jordan Lagomorpha 1 1 represents biogeographic boundaries for the Rodentia 7 26 extreme distribution limit of several African Total 26 78 (e.g. Procavia capensis and Rousettus aegypti- acus) and Palaearctic mammals (e. g. Eri- Order Insectivora naceus concolor, Sciurus anomalus, Apodemus Order Insectivora contains the most mystacinus, Lutra lutra and Meles meles). primitive placental mammals. A pointed snout and a small brain case characterises Our knowledge on the diversity and members of this order. -
Non-Leishmania Parasite in Fatal Visceral Leishmaniasis–Like Disease, Brazil
DISPATCHES Non-Leishmania Parasite in Fatal Visceral Leishmaniasis–Like Disease, Brazil Sandra R. Maruyama,1 Alynne K.M. de Santana,1,2 performed whole-genome sequencing of 2 clinical isolates Nayore T. Takamiya, Talita Y. Takahashi, from a patient with a fatal illness with clinical characteris- Luana A. Rogerio, Caio A.B. Oliveira, tics similar to those of VL. Cristiane M. Milanezi, Viviane A. Trombela, Angela K. Cruz, Amélia R. Jesus, The Study Aline S. Barreto, Angela M. da Silva, During 2011–2012, we characterized 2 parasite strains, LVH60 Roque P. Almeida,3 José M. Ribeiro,3 João S. Silva3 and LVH60a, isolated from an HIV-negative man when he was 64 years old and 65 years old (Table; Appendix, https:// Through whole-genome sequencing analysis, we identified wwwnc.cdc.gov/EID/article/25/11/18-1548-App1.pdf). non-Leishmania parasites isolated from a man with a fatal Treatment-refractory VL-like disease developed in the man; visceral leishmaniasis–like illness in Brazil. The parasites signs and symptoms consisted of weight loss, fever, anemia, infected mice and reproduced the patient’s clinical mani- festations. Molecular epidemiologic studies are needed to low leukocyte and platelet counts, and severe liver and spleen ascertain whether a new infectious disease is emerging that enlargements. VL was confirmed by light microscopic exami- can be confused with leishmaniasis. nation of amastigotes in bone marrow aspirates and promas- tigotes in culture upon parasite isolation and by positive rK39 serologic test results. Three courses of liposomal amphotericin eishmaniases are caused by ≈20 Leishmania species B resulted in no response. -
Meriones Unguiculatus) Genome ⁎ Diego A.R
Genomics xxx (xxxx) xxx–xxx Contents lists available at ScienceDirect Genomics journal homepage: www.elsevier.com/locate/ygeno De novo sequencing and initial annotation of the Mongolian gerbil (Meriones unguiculatus) genome ⁎ Diego A.R. Zorioa, , Scott Monsmab, Dan H. Sanesc, Nace L. Goldingd, Edwin W. Rubele, ⁎⁎ Yuan Wanga,f, a Department of Biomedical Sciences, College of Medicine, Florida State University, Tallahassee, FL, USA b Lucigen Corporation, Middleton, WI, USA c Center for Neural Science, New York University, New York, NY, USA d University of Texas at Austin, Department of Neuroscience, Center for Learning and Memory, Austin, TX, USA e Virginia Merrill Bloedel Hearing Research Center, Department of Otolaryngology-Head and Neck Surgery, University of Washington, Seattle, WA, USA f Program in Neuroscience, Florida State University, Tallahassee, FL, USA ARTICLE INFO ABSTRACT Keywords: The Mongolian gerbil (Meriones unguiculatus) is a member of the rodent family that displays several features not Genome assembly found in mice or rats, including sensory specializations and social patterns more similar to those in humans. Gene prediction These features have made gerbils a valuable animal for research studies of auditory and visual processing, brain Fragile X syndrome development, learning and memory, and neurological disorders. Here, we report the whole gerbil annotated Oxytocin receptor genome sequence, and identify important similarities and differences to the human and mouse genomes. We Hearing further analyze the chromosomal structure of eight genes with high relevance for controlling neural signaling Social interaction Plasma membrane calcium ATPase and demonstrate a high degree of homology between these genes in mouse and gerbil. This homology increases the likelihood that individual genes can be rapidly identified in gerbil and used for genetic manipulations. -
New Approaches to Systematics of Trypanosomatidae
Opinion New Approaches to Systematics of Trypanosomatidae: Criteria for Taxonomic (Re)description 1,2 3 4 Jan Votýpka, Claudia M. d'Avila-Levy, Philippe Grellier, 5 ̌2,6,7 Dmitri A. Maslov, Julius Lukes, and 8,2,9, Vyacheslav Yurchenko * While dixenous trypanosomatids represent one of the most dangerous patho- Trends gens for humans and domestic animals, their monoxenous relatives have fre- The protists classified into the family quently become model organisms for studies of diversity of parasitic protists Trypanosomatidae (Euglenozoa: Kine- toplastea) represent a diverse and and host–parasite associations. Yet, the classification of the family Trypano- important group of organisms. somatidae is not finalized and often confusing. Here we attempt to make a Despite recent advances, the taxon- blueprint for future studies in this field. We would like to elicit a discussion about omy and systematics of Trypanosoma- an updated procedure, as traditional taxonomy was not primarily designed to be tidae are far from being consistent with used for protists, nor can molecular phylogenetics solve all the problems alone. the known phylogenetic affinities within this group. The current status, specific cases, and examples of generalized solutions are presented under conditions where practicality is openly favored over rigid We are eliciting a discussion about an taxonomic codes or blind phylogenetic approach. updated procedure in trypanosomatid systematics, as traditional taxonomy was not primarily designed to be used Classification of Trypanosomatids for -
Interspecific Geographic Distribution and Variation of the Pathogens
Journal of Invertebrate Pathology 109 (2012) 209–216 Contents lists available at SciVerse ScienceDirect Journal of Invertebrate Pathology journal homepage: www.elsevier.com/locate/jip Interspecific geographic distribution and variation of the pathogens Nosema bombi and Crithidia species in United States bumble bee populations Nils Cordes a, Wei-Fone Huang b, James P. Strange c, Sydney A. Cameron d, Terry L. Griswold c, ⇑ Jeffrey D. Lozier e, Leellen F. Solter b, a University of Bielefeld, Evolutionary Biology, Morgenbreede 45, 33615 Bielefeld, Germany b Illinois Natural History Survey, Prairie Research Institute, University of Illinois, 1816 S. Oak St., Champaign, IL 61820, United States c USDA-ARS Pollinating Insects Research Unit, Utah State University, Logan, UT 84322-5310, United States d Department of Entomology and Institute for Genomic Biology, University of Illinois, Urbana, IL 61801, United States e Department of Biological Sciences, University of Alabama, Tuscaloosa, AL 35487, United States article info abstract Article history: Several bumble bee (Bombus) species in North America have undergone range reductions and rapid Received 4 September 2011 declines in relative abundance. Pathogens have been suggested as causal factors, however, baseline data Accepted 10 November 2011 on pathogen distributions in a large number of bumble bee species have not been available to test this Available online 18 November 2011 hypothesis. In a nationwide survey of the US, nearly 10,000 specimens of 36 bumble bee species collected at 284 sites were evaluated for the presence and prevalence of two known Bombus pathogens, the micros- Keywords: poridium Nosema bombi and trypanosomes in the genus Crithidia. Prevalence of Crithidia was 610% for all Bombus species host species examined but was recorded from 21% of surveyed sites. -
PETITION to LIST the Rusty Patched Bumble Bee Bombus Affinis
PETITION TO LIST The rusty patched bumble bee Bombus affinis (Cresson), 1863 AS AN ENDANGERED SPECIES UNDER THE U.S. ENDANGERED SPECIES ACT Female Bombus affinis foraging on Dalea purpurea at Pheasant Branch Conservancy, Wisconsin, 2012, Photo © Christy Stewart Submitted by The Xerces Society for Invertebrate Conservation Prepared by Sarina Jepsen, Elaine Evans, Robbin Thorp, Rich Hatfield, and Scott Hoffman Black January 31, 2013 1 The Honorable Ken Salazar Secretary of the Interior Office of the Secretary Department of the Interior 18th and C Street N.W. Washington D.C., 20240 Dear Mr. Salazar: The Xerces Society for Invertebrate Conservation hereby formally petitions to list the rusty patched bumble bee (Bombus affinis) as an endangered species under the Endangered Species Act, 16 U.S.C. § 1531 et seq. This petition is filed under 5 U.S.C. 553(e) and 50 CFR 424.14(a), which grants interested parties the right to petition for issue of a rule from the Secretary of the Interior. Bumble bees are iconic pollinators that contribute to our food security and the healthy functioning of our ecosystems. The rusty patched bumble bee was historically common from the Upper Midwest to the eastern seaboard, but in recent years it has been lost from more than three quarters of its historic range and its relative abundance has declined by ninety-five percent. Existing regulations are inadequate to protect this species from disease and other threats. We are aware that this petition sets in motion a specific process placing definite response requirements on the U.S. Fish and Wildlife Service and very specific time constraints upon those responses. -
List of 28 Orders, 129 Families, 598 Genera and 1121 Species in Mammal Images Library 31 December 2013
What the American Society of Mammalogists has in the images library LIST OF 28 ORDERS, 129 FAMILIES, 598 GENERA AND 1121 SPECIES IN MAMMAL IMAGES LIBRARY 31 DECEMBER 2013 AFROSORICIDA (5 genera, 5 species) – golden moles and tenrecs CHRYSOCHLORIDAE - golden moles Chrysospalax villosus - Rough-haired Golden Mole TENRECIDAE - tenrecs 1. Echinops telfairi - Lesser Hedgehog Tenrec 2. Hemicentetes semispinosus – Lowland Streaked Tenrec 3. Microgale dobsoni - Dobson’s Shrew Tenrec 4. Tenrec ecaudatus – Tailless Tenrec ARTIODACTYLA (83 genera, 142 species) – paraxonic (mostly even-toed) ungulates ANTILOCAPRIDAE - pronghorns Antilocapra americana - Pronghorn BOVIDAE (46 genera) - cattle, sheep, goats, and antelopes 1. Addax nasomaculatus - Addax 2. Aepyceros melampus - Impala 3. Alcelaphus buselaphus - Hartebeest 4. Alcelaphus caama – Red Hartebeest 5. Ammotragus lervia - Barbary Sheep 6. Antidorcas marsupialis - Springbok 7. Antilope cervicapra – Blackbuck 8. Beatragus hunter – Hunter’s Hartebeest 9. Bison bison - American Bison 10. Bison bonasus - European Bison 11. Bos frontalis - Gaur 12. Bos javanicus - Banteng 13. Bos taurus -Auroch 14. Boselaphus tragocamelus - Nilgai 15. Bubalus bubalis - Water Buffalo 16. Bubalus depressicornis - Anoa 17. Bubalus quarlesi - Mountain Anoa 18. Budorcas taxicolor - Takin 19. Capra caucasica - Tur 20. Capra falconeri - Markhor 21. Capra hircus - Goat 22. Capra nubiana – Nubian Ibex 23. Capra pyrenaica – Spanish Ibex 24. Capricornis crispus – Japanese Serow 25. Cephalophus jentinki - Jentink's Duiker 26. Cephalophus natalensis – Red Duiker 1 What the American Society of Mammalogists has in the images library 27. Cephalophus niger – Black Duiker 28. Cephalophus rufilatus – Red-flanked Duiker 29. Cephalophus silvicultor - Yellow-backed Duiker 30. Cephalophus zebra - Zebra Duiker 31. Connochaetes gnou - Black Wildebeest 32. Connochaetes taurinus - Blue Wildebeest 33. Damaliscus korrigum – Topi 34. -
Mammals of Jord a N
Mammals of Jord a n Z . A M R , M . A B U B A K E R & L . R I F A I Abstract: A total of 79 species of mammals belonging to seven orders (Insectivora, Chiroptera, Carn i- vora, Hyracoidea, Art i odactyla, Lagomorpha and Rodentia) have been re c o rde d from Jordan. Bats and rodents re p res ent exhibit the highest diversity of re c o rde d species. Notes on systematics and ecology for the re c o rded species were given. Key words: mammals, Jordan, ecology, sytematics, zoogeography, arid enviro n m e n t . Introduction species, while lagomorphs and hyracoids are the lowest. The mammalian diversity of Jordan is remarkable considering its location at the In this account we list the surv i v i n g meeting point of three diff e rent faunal ele- mammals of Jordan, including some re i n t ro- ments; the African, Oriental and Palaearc- duced species. tic. This diversity is a combination of these Table 1: Summary to the mammalian taxa occurring elements in addition to the occurrence of in Jordan few endemic forms. Jord a n ’s location re s u l t- O rd e r No. of Families No. of Species ed in a huge faunal diversity compared to I n s e c t i v o r a 2 5 the surrounding countries, hetero g e n e i t y C h i ro p t e r a 8 2 4 and range expansion of diff e rent species. -
Pathogenomics of Trypanosomatid Parasites
White Paper 8/12/07 Pathogenomics of Trypanosomatid parasites Greg Buck (Virginia Commonwealth University) Matt Berriman (Wellcome Trust Sanger Institute) John Donelson (University of Iowa) Najib El-Sayed (University of Maryland) Jessica Kissinger (University of Georgia) Larry Simpson (University of California, Los Angeles) Andy Tait (University of Glasgow) Marta Teixeira (University of Sao Paulo, Brasil) Stephen Beverley (Washington University, St. Louis) Executive Summary. The family Trypanosomatidae of the protistan order Kinetoplastida includes three major lineages of human pathogens – the Leishmania and the African and American trypanosomes – that each rank within the top 10 in terms of global impact. The combined impact measured by DALY of these three parasites approaches 5 million. There are currently five ‘completed’ genomes of kinetoplastids: one African trypanosome, three Leishmania, and one American trypanosome, the latter being effectively a preliminary draft sequence due to assembly problems caused by its hybrid nature and extensive repetitive sequences. Perhaps unlike the situation found in other groups of eukaryotic pathogens, trypanosomatids present two unique challenges. First is the fact that within each of the three major lineages, a wide range of disease pathologies is found. Thus, we are probing multiple diseases. Second is the fact that the trypanosomatids are relatively ancient, with divergences amongst the major lineages ranging from 200-500 million years ago. Thus, there is a wide range of evolutionary and pathological ‘space’ yet to be explored by genomic methods, accompanied by great opportunities for new insights and discovery. The goals of this sequencing effort include improvement of: 1) our understanding of the mechanisms by which these pathogens cause disease; 2) our ability to influence the severity of these diseases through chemo- or immuno- prophylaxis and treatment; and, 3) our understanding of the biology that led these organisms to evolve into such successful pathogens. -
A Petition to List the Blue Calamintha
A Petition to list the Blue Calamintha Bee (Osmia calaminthae) as an Endangered, or Alternatively as a Threatened, Species Pursuant to the Endangered Species Act and for the Designation of Critical Habitat for this Species Blue Calamintha Bee (Osmia calaminthae) (Photo by Tim Lethbridge, used with permission, available at http://bugguide.net/node/view/394002/bgimage). Submitted to the United States Secretary of the Interior acting through the United States Fish and Wildlife Service February 5, 2015 By: Defenders of Wildlife1 535 16th Street, Suite 310 Denver, Colorado 80202 Phone: 720-943-0457 [email protected] [email protected] 1 Defenders of Wildlife would like to thank Olivia N. Kyle, a law student at the University of Denver, Sturm College of Law, for her substantial research and work preparing this Petition. I. INTRODUCTION Petitioner, Defenders of Wildlife (“Defenders”), is a national, non-profit, conservation organization dedicated to the protection of all native animals and plants in their natural communities. With more than one million members and activists, Defenders is a leading advocate for the protection of threatened and endangered species. Defenders’ 2013-2023 Strategic Plan identifies bees as one of several categories of key species whose conservation is a priority for our organization’s work.2 Through this Petition, Defenders formally requests the Secretary of the Interior, acting through the United States Fish and Wildlife Service (the “Service”), to list the Blue Calamintha Bee, Osmia calaminthae, (“Bee”) as an “endangered,” or alternatively as a “threatened,” species under the Endangered Species Act (“ESA”). 16 U.S.C. §§ 1531-44. Additionally, Defenders requests that the Service designate critical habitat for the Bee concurrently with the listing of the species. -
Cytosystematics of Gerbils
Cytosystematics of Gerbils By Liezel Iris Knight Thesis presented in partial fulfilment of the requirements for the degree Masters of Science in Zoology at Stellenbosch University Supervisor: Dr. RamugondoVictor Rambau Faculty of Science Department of Botany and Zoology March 2013 Stellenbosch University http://scholar.sun.ac.za Declaration By submitting this thesis/dissertation electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. March 2013 Copyright © 2013 Stellenbosch University All rights reserved ii Stellenbosch University http://scholar.sun.ac.za Abstract The objectives of this research were to: (1) accurately identify chromosome homology, (2) identify chromosome rearrangements leading to diploid number variation and chromosome evolution to formulate the ancestral gerbil karyotype and distinguish homoplasy from hemiplasy, and (3) construct a phylogeny using chromosomal characters based on G-banding and fluorescence in situ hybridization (FISH) of ten gerbil species representing five genera (Gerbilliscus, Desmodillus, Psammomys, Meriones, Taterillus), with probes derived from flow- sorted chromosomes of G. paeba (GPA, 2n = 36), and polarised with the murid outgroup, Micaelamys namaquensis. All paints successfully hybridized to all ingroup and outgroup taxa. Three of the 19 G. paeba painting probes (GPA 7, 9 and X [including the X; autosome translocation in T. pygargus]) were conserved as whole chromosomes, and 16 were rearranged (GPA 1-6, 8, 10-17).