Amaryllidaceae) from the Department of Cauca, Colombia
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Homologies of Floral Structures in Velloziaceae with Particular Reference to the Corona Author(S): Maria Das Graças Sajo, Renato De Mello‐Silva, and Paula J
Homologies of Floral Structures in Velloziaceae with Particular Reference to the Corona Author(s): Maria das Graças Sajo, Renato de Mello‐Silva, and Paula J. Rudall Source: International Journal of Plant Sciences, Vol. 171, No. 6 (July/August 2010), pp. 595- 606 Published by: The University of Chicago Press Stable URL: http://www.jstor.org/stable/10.1086/653132 . Accessed: 07/02/2014 10:53 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp . JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The University of Chicago Press is collaborating with JSTOR to digitize, preserve and extend access to International Journal of Plant Sciences. http://www.jstor.org This content downloaded from 186.217.234.18 on Fri, 7 Feb 2014 10:53:04 AM All use subject to JSTOR Terms and Conditions Int. J. Plant Sci. 171(6):595–606. 2010. Ó 2010 by The University of Chicago. All rights reserved. 1058-5893/2010/17106-0003$15.00 DOI: 10.1086/653132 HOMOLOGIES OF FLORAL STRUCTURES IN VELLOZIACEAE WITH PARTICULAR REFERENCE TO THE CORONA Maria das Grac¸as Sajo,* Renato de Mello-Silva,y and Paula J. Rudall1,z *Departamento de Botaˆnica, Instituto de Biocieˆncias, Universidade -
Complete Chloroplast Genomes Shed Light on Phylogenetic
www.nature.com/scientificreports OPEN Complete chloroplast genomes shed light on phylogenetic relationships, divergence time, and biogeography of Allioideae (Amaryllidaceae) Ju Namgung1,4, Hoang Dang Khoa Do1,2,4, Changkyun Kim1, Hyeok Jae Choi3 & Joo‑Hwan Kim1* Allioideae includes economically important bulb crops such as garlic, onion, leeks, and some ornamental plants in Amaryllidaceae. Here, we reported the complete chloroplast genome (cpDNA) sequences of 17 species of Allioideae, fve of Amaryllidoideae, and one of Agapanthoideae. These cpDNA sequences represent 80 protein‑coding, 30 tRNA, and four rRNA genes, and range from 151,808 to 159,998 bp in length. Loss and pseudogenization of multiple genes (i.e., rps2, infA, and rpl22) appear to have occurred multiple times during the evolution of Alloideae. Additionally, eight mutation hotspots, including rps15-ycf1, rps16-trnQ-UUG, petG-trnW-CCA , psbA upstream, rpl32- trnL-UAG , ycf1, rpl22, matK, and ndhF, were identifed in the studied Allium species. Additionally, we present the frst phylogenomic analysis among the four tribes of Allioideae based on 74 cpDNA coding regions of 21 species of Allioideae, fve species of Amaryllidoideae, one species of Agapanthoideae, and fve species representing selected members of Asparagales. Our molecular phylogenomic results strongly support the monophyly of Allioideae, which is sister to Amaryllioideae. Within Allioideae, Tulbaghieae was sister to Gilliesieae‑Leucocoryneae whereas Allieae was sister to the clade of Tulbaghieae‑ Gilliesieae‑Leucocoryneae. Molecular dating analyses revealed the crown age of Allioideae in the Eocene (40.1 mya) followed by diferentiation of Allieae in the early Miocene (21.3 mya). The split of Gilliesieae from Leucocoryneae was estimated at 16.5 mya. -
Phylogeny of the American Amaryllidaceae Based on Nrdna ITS Sequences
Systematic Botany (2000), 25(4): pp. 708±726 q Copyright 2000 by the American Society of Plant Taxonomists Phylogeny of the American Amaryllidaceae based on nrDNA ITS sequences ALAN W. M EEROW USDA-ARS-SHRS, 13601 Old Cutler Road, Miami, FL 33158 and Fairchild Tropical Garden, 10901 Old Cutler Road, Miami, Florida 33158 CHARLES L. GUY and QIN-BAO LI University of Florida, Department of Environmental Horticulture, 1545 Fi®eld Hall, Gainesville, Florida 32611 SI-LIN YANG University of Florida, Fort Lauderdale Research and Education Center, 3205 College Avenue, Fort Lauderdale, Florida 33314 Communicating Editor: Kathleen A. Kron ABSTRACT. Analysis of three plastid DNA sequences for a broad sampling of Amaryllidaceae resolve the American genera of the Amaryllidaceae as a clade that is sister to the Eurasian genera of the family, but base substitution rates for these genes are too low to resolve much of the intergeneric relationships within the American clade. We obtained ITS rDNA sequences for 76 species of American Amaryllidaceae and analyzed the aligned matrix cladistically, both with and without gaps included, using two species of Pancratium as outgroup taxa. ITS resolves two moderately to strongly supported groups, an Andean tetraploid clade, and a primarily extra-Andean ``hippeastroid'' clade. Within the hippeastroid clade, the tribe Grif®neae is resolved as sister to the rest of Hippeastreae. The genera Rhodophiala and Zephyranthes are resolved as polyphyletic, but the possibility of reticulation within this clade argues against any re-arrangement of these genera without further investigation. Within the Andean subclade, Eustephieae resolves as sister to all other tribes; a distinct petiolate-leafed group is resolved, combining the tribe Eucharideae and the petiolate Stenomesseae; and a distinct Hymenocallideae is supported. -
(Tribe Haemantheae) Inferred from Plastid and Nuclear Non-Coding DNA Sequences
Plant Syst. Evol. 244: 141–155 (2004) DOI 10.1007/s00606-003-0085-z Generic relationships among the baccate-fruited Amaryllidaceae (tribe Haemantheae) inferred from plastid and nuclear non-coding DNA sequences A. W. Meerow1, 2 and J. R. Clayton1 1 USDA-ARS-SHRS, National Germplasm Repository, Miami, Florida, USA 2 Fairchild Tropical Garden, Miami, Florida, USA Received October 22, 2002; accepted September 3, 2003 Published online: February 12, 2004 Ó Springer-Verlag 2004 Abstract. Using sequences from the plastid trnL-F Key words: Amaryllidaceae, Haemantheae, geo- region and nrDNA ITS, we investigated the phy- phytes, South Africa, monocotyledons, DNA, logeny of the fleshy-fruited African tribe Haeman- phylogenetics, systematics. theae of the Amaryllidaceae across 19 species representing all genera of the tribe. ITS and a Baccate fruits have evolved only once in the combined matrix produce the most resolute and Amaryllidaceae (Meerow et al. 1999), and well-supported tree with parsimony analysis. Two solely in Africa, but the genera possessing main clades are resolved, one comprising the them have not always been recognized as a monophyletic rhizomatous genera Clivia and Cryp- monophyletic group. Haemanthus L. and tostephanus, and a larger clade that unites Haemanthus and Scadoxus as sister genera to an Gethyllis L. were the first two genera of the Apodolirion/Gethyllis subclade. One of four group to be described (Linneaus 1753). Her- included Gethyllis species, G. lanuginosa, resolves bert (1837) placed Haemanthus (including as sister to Apodolirion with ITS. Relationships Scadoxus Raf.) and Clivia Lindl. in the tribe among the Clivia species are not in agreement with Amaryllidiformes, while Gethyllis was classi- a previous published phylogeny. -
Generic Classification of Amaryllidaceae Tribe Hippeastreae Nicolás García,1 Alan W
TAXON 2019 García & al. • Genera of Hippeastreae SYSTEMATICS AND PHYLOGENY Generic classification of Amaryllidaceae tribe Hippeastreae Nicolás García,1 Alan W. Meerow,2 Silvia Arroyo-Leuenberger,3 Renata S. Oliveira,4 Julie H. Dutilh,4 Pamela S. Soltis5 & Walter S. Judd5 1 Herbario EIF & Laboratorio de Sistemática y Evolución de Plantas, Facultad de Ciencias Forestales y de la Conservación de la Naturaleza, Universidad de Chile, Av. Santa Rosa 11315, La Pintana, Santiago, Chile 2 USDA-ARS-SHRS, National Germplasm Repository, 13601 Old Cutler Rd., Miami, Florida 33158, U.S.A. 3 Instituto de Botánica Darwinion, Labardén 200, CC 22, B1642HYD, San Isidro, Buenos Aires, Argentina 4 Departamento de Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Postal Code 6109, 13083-970 Campinas, SP, Brazil 5 Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611, U.S.A. Address for correspondence: Nicolás García, [email protected] DOI https://doi.org/10.1002/tax.12062 Abstract A robust generic classification for Amaryllidaceae has remained elusive mainly due to the lack of unequivocal diagnostic characters, a consequence of highly canalized variation and a deeply reticulated evolutionary history. A consensus classification is pro- posed here, based on recent molecular phylogenetic studies, morphological and cytogenetic variation, and accounting for secondary criteria of classification, such as nomenclatural stability. Using the latest sutribal classification of Hippeastreae (Hippeastrinae and Traubiinae) as a foundation, we propose the recognition of six genera, namely Eremolirion gen. nov., Hippeastrum, Phycella s.l., Rhodolirium s.str., Traubia, and Zephyranthes s.l. A subgeneric classification is suggested for Hippeastrum and Zephyranthes to denote putative subclades. -
TELOPEA Publication Date: 13 October 1983 Til
Volume 2(4): 425–452 TELOPEA Publication Date: 13 October 1983 Til. Ro)'al BOTANIC GARDENS dx.doi.org/10.7751/telopea19834408 Journal of Plant Systematics 6 DOPII(liPi Tmst plantnet.rbgsyd.nsw.gov.au/Telopea • escholarship.usyd.edu.au/journals/index.php/TEL· ISSN 0312-9764 (Print) • ISSN 2200-4025 (Online) Telopea 2(4): 425-452, Fig. 1 (1983) 425 CURRENT ANATOMICAL RESEARCH IN LILIACEAE, AMARYLLIDACEAE AND IRIDACEAE* D.F. CUTLER AND MARY GREGORY (Accepted for publication 20.9.1982) ABSTRACT Cutler, D.F. and Gregory, Mary (Jodrell(Jodrel/ Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, England) 1983. Current anatomical research in Liliaceae, Amaryllidaceae and Iridaceae. Telopea 2(4): 425-452, Fig.1-An annotated bibliography is presented covering literature over the period 1968 to date. Recent research is described and areas of future work are discussed. INTRODUCTION In this article, the literature for the past twelve or so years is recorded on the anatomy of Liliaceae, AmarylIidaceae and Iridaceae and the smaller, related families, Alliaceae, Haemodoraceae, Hypoxidaceae, Ruscaceae, Smilacaceae and Trilliaceae. Subjects covered range from embryology, vegetative and floral anatomy to seed anatomy. A format is used in which references are arranged alphabetically, numbered and annotated, so that the reader can rapidly obtain an idea of the range and contents of papers on subjects of particular interest to him. The main research trends have been identified, classified, and check lists compiled for the major headings. Current systematic anatomy on the 'Anatomy of the Monocotyledons' series is reported. Comment is made on areas of research which might prove to be of future significance. -
Illustrated Flora of East Texas Illustrated Flora of East Texas
ILLUSTRATED FLORA OF EAST TEXAS ILLUSTRATED FLORA OF EAST TEXAS IS PUBLISHED WITH THE SUPPORT OF: MAJOR BENEFACTORS: DAVID GIBSON AND WILL CRENSHAW DISCOVERY FUND U.S. FISH AND WILDLIFE FOUNDATION (NATIONAL PARK SERVICE, USDA FOREST SERVICE) TEXAS PARKS AND WILDLIFE DEPARTMENT SCOTT AND STUART GENTLING BENEFACTORS: NEW DOROTHEA L. LEONHARDT FOUNDATION (ANDREA C. HARKINS) TEMPLE-INLAND FOUNDATION SUMMERLEE FOUNDATION AMON G. CARTER FOUNDATION ROBERT J. O’KENNON PEG & BEN KEITH DORA & GORDON SYLVESTER DAVID & SUE NIVENS NATIVE PLANT SOCIETY OF TEXAS DAVID & MARGARET BAMBERGER GORDON MAY & KAREN WILLIAMSON JACOB & TERESE HERSHEY FOUNDATION INSTITUTIONAL SUPPORT: AUSTIN COLLEGE BOTANICAL RESEARCH INSTITUTE OF TEXAS SID RICHARDSON CAREER DEVELOPMENT FUND OF AUSTIN COLLEGE II OTHER CONTRIBUTORS: ALLDREDGE, LINDA & JACK HOLLEMAN, W.B. PETRUS, ELAINE J. BATTERBAE, SUSAN ROBERTS HOLT, JEAN & DUNCAN PRITCHETT, MARY H. BECK, NELL HUBER, MARY MAUD PRICE, DIANE BECKELMAN, SARA HUDSON, JIM & YONIE PRUESS, WARREN W. BENDER, LYNNE HULTMARK, GORDON & SARAH ROACH, ELIZABETH M. & ALLEN BIBB, NATHAN & BETTIE HUSTON, MELIA ROEBUCK, RICK & VICKI BOSWORTH, TONY JACOBS, BONNIE & LOUIS ROGNLIE, GLORIA & ERIC BOTTONE, LAURA BURKS JAMES, ROI & DEANNA ROUSH, LUCY BROWN, LARRY E. JEFFORDS, RUSSELL M. ROWE, BRIAN BRUSER, III, MR. & MRS. HENRY JOHN, SUE & PHIL ROZELL, JIMMY BURT, HELEN W. JONES, MARY LOU SANDLIN, MIKE CAMPBELL, KATHERINE & CHARLES KAHLE, GAIL SANDLIN, MR. & MRS. WILLIAM CARR, WILLIAM R. KARGES, JOANN SATTERWHITE, BEN CLARY, KAREN KEITH, ELIZABETH & ERIC SCHOENFELD, CARL COCHRAN, JOYCE LANEY, ELEANOR W. SCHULTZE, BETTY DAHLBERG, WALTER G. LAUGHLIN, DR. JAMES E. SCHULZE, PETER & HELEN DALLAS CHAPTER-NPSOT LECHE, BEVERLY SENNHAUSER, KELLY S. DAMEWOOD, LOGAN & ELEANOR LEWIS, PATRICIA SERLING, STEVEN DAMUTH, STEVEN LIGGIO, JOE SHANNON, LEILA HOUSEMAN DAVIS, ELLEN D. -
Endemism As a Tool for Conservation. Podocarpus National Park a Case Study
Pablo Lozano Tania Delgado y Zhofre Aguirre 44 Endemism as a tool for conservation. Podocarpus National Park a case study. Resumen El Parque Nacional Podocarpus (PNP), ubicado al sur del Ecuador, posee 211 especies endémicas de las registradas para el país. El presente estudio identificó 70 especies endémicas exclusivas, en 29 familias y 50 géneros. Se considera que algunos taxones tienen su centro de diversidad en el PNP (Brachyotum, Centropogon y Lysipomia). El mayor endemismo, se ubica principalmente entre 2800 a 3200 m, en la transición de páramo arbustivo a páramo herbáceo. De acuerdo al análisis TWINSPAN, se encontraron dos comunidades vegetales subdivididas y cinco asociaciones. En las dos primeras comunidades de páramos y arbustales naturales y antrópicos que comprende la franja altitudinal 2300-3400 m, se distribuyen las endémicas, aumentando su presencia a medida que haciende la gradiente. Este estudio reconoce 22 unidades de paisaje, considerándose el área con endemismo extremadamente alto al tipo de vegetación de bosque chaparro, que corresponde a la franja de sub-páramo, con prioridad para conservar, las áreas de bajo endemismo, son bosque abierto/matorral/pastizal; tienen la misma importancia por su exclusividad y posición fuera del PNP. El sitio con mayor número de endémicas es Cajanuma con 40 especies, mientras que el sitio con mayor acumulación de endémicas por superficie muestreada es Cerro Toledo, con 12 especies en 175 m². Todas las especies tienen una amplia distribución en los páramos del parque, con algunas excepciones de distribución restringida como el caso de Puya obconica en el sector de Sabanilla con un rango no mayor a 10 km². -
Epilist 1.0: a Global Checklist of Vascular Epiphytes
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2021 EpiList 1.0: a global checklist of vascular epiphytes Zotz, Gerhard ; Weigelt, Patrick ; Kessler, Michael ; Kreft, Holger ; Taylor, Amanda Abstract: Epiphytes make up roughly 10% of all vascular plant species globally and play important functional roles, especially in tropical forests. However, to date, there is no comprehensive list of vas- cular epiphyte species. Here, we present EpiList 1.0, the first global list of vascular epiphytes based on standardized definitions and taxonomy. We include obligate epiphytes, facultative epiphytes, and hemiepiphytes, as the latter share the vulnerable epiphytic stage as juveniles. Based on 978 references, the checklist includes >31,000 species of 79 plant families. Species names were standardized against World Flora Online for seed plants and against the World Ferns database for lycophytes and ferns. In cases of species missing from these databases, we used other databases (mostly World Checklist of Selected Plant Families). For all species, author names and IDs for World Flora Online entries are provided to facilitate the alignment with other plant databases, and to avoid ambiguities. EpiList 1.0 will be a rich source for synthetic studies in ecology, biogeography, and evolutionary biology as it offers, for the first time, a species‐level overview over all currently known vascular epiphytes. At the same time, the list represents work in progress: species descriptions of epiphytic taxa are ongoing and published life form information in floristic inventories and trait and distribution databases is often incomplete and sometimes evenwrong. -
Plant Inventory No. 140
Plant Inventory No. 140 UNITED STATES DEPARTMENT OF AGRICULTURE Washington, D. C. July 1950 PLANT MATERIAL INTRODUCED BY THE DIVISION OF PLANT EX- PLORATION AND INTRODUCTION, BUREAU OF PLANT INDUSTRY,1 JULY 1 TO SEPTEMBER 30,1939 (Nos. 133382 to 134283) CONTENTS Page Inventory 1 Index of common and scientific names 40 This inventory. No. 140, lists plant material (Nos. 133382 to 134283) received by the Division of Plant Exploration and Introduction during the period from July 1 to September 30,1939. It is a historical record of plant material introduced for Department and other specialists, and is not to be considered as a list of plant material for distribution. PAUL G. RUSSEL,L, Botanist. Plwnt Industry Station, Beltsmlle, Md. INVENTORY' 133382 to 133385. MUSA spp. Musaceae. Banana. From Cuba. Plants presented by F. G. Walsingham, Atkins Institution of the Arnold Arboretum, Soledad, Cienfuegos, Received July 1, 1939. 133382 to 133384. MUSA PABADISIACA L. Plantain. 133382. Burro. A short stubby fruit, coarse in flesh and inferior in quality to both the Macho and Hembra varieties. 133383. Hembra. This plantain resembles the Macho variety, but is some- what smaller and is inferior in quality. The flesh is said to be harder. 133384. Macho. This is the largest and best of the plantains, or cooking bananas, and is the standard variety of commerce. The fruits are from 9 to 12 inches long. 133385. MUSA PABADISIACA var. SAPIENTUM (L.) Kuntze. Morado. A short, thick fruit with a thinnish red skin. It is best baked when it becomes dry and mealy. lNow Bureau of Plant Industry, Soils, and Agricultural Engineering, Agricul- tural Research Administration, United States Department of Agriculture. -
2Nd International Congress of Alpine and Arctic Botanical Gardens
Proceedings of the 2nd International Congress of Alpine and Arctic Botanical Gardens München 22-25 April 2009 CONTENTS • Introduction........................................................ 5 • Christine Freitag (Freising, Germany) Educative tools to connect an alpine garden Diversification of Collections to the surrounding vegetation......................... 35 • Katie Price (Kew, United Kingdom) • Jenny Wainwright-Klein (München, Germany) Kew’s Alpine House - what’s the point?......... 39 Experiences with the introduction of southern hemisphere alpines.............................................. 6 Research and Conservation Activities • Richard Hurstel, Pascal Salze, Christophe Per- rier, Rolland Douzet & Serge Aubert (Grenoble, • Gunter Karste (Wernigerode, Germany) France) Investigation on renaturation of the subalpine Experiences with the introduction of southern meadow vegetation on top of Brocken mountain hemisphere alpines: Southern Andes and Pata- ............................................................................. 44 gonia...................................................................... 9 • Andreas Gröger & Annette Menzel (München & • Anne Humburg (Seligenstadt, Germany) Freising, Germany) Betty Ford Alpine Gardens: the many faces of Detection of climate change impacts in alpine North America’s highest botanical garden...... 13 and arctic botanic gardens: a long-term pheno- logy observation program............................... 47 Horticultural Practices • George Nakhutsrishvili, Sh. Sikharulidze (Tbilisi, Georgia) -
Networks in a Large-Scale Phylogenetic Analysis: Reconstructing Evolutionary History of Asparagales (Lilianae) Based on Four Plastid Genes
Networks in a Large-Scale Phylogenetic Analysis: Reconstructing Evolutionary History of Asparagales (Lilianae) Based on Four Plastid Genes Shichao Chen1., Dong-Kap Kim2., Mark W. Chase3, Joo-Hwan Kim4* 1 College of Life Science and Technology, Tongji University, Shanghai, China, 2 Division of Forest Resource Conservation, Korea National Arboretum, Pocheon, Gyeonggi- do, Korea, 3 Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, United Kingdom, 4 Department of Life Science, Gachon University, Seongnam, Gyeonggi-do, Korea Abstract Phylogenetic analysis aims to produce a bifurcating tree, which disregards conflicting signals and displays only those that are present in a large proportion of the data. However, any character (or tree) conflict in a dataset allows the exploration of support for various evolutionary hypotheses. Although data-display network approaches exist, biologists cannot easily and routinely use them to compute rooted phylogenetic networks on real datasets containing hundreds of taxa. Here, we constructed an original neighbour-net for a large dataset of Asparagales to highlight the aspects of the resulting network that will be important for interpreting phylogeny. The analyses were largely conducted with new data collected for the same loci as in previous studies, but from different species accessions and greater sampling in many cases than in published analyses. The network tree summarised the majority data pattern in the characters of plastid sequences before tree building, which largely confirmed the currently recognised phylogenetic relationships. Most conflicting signals are at the base of each group along the Asparagales backbone, which helps us to establish the expectancy and advance our understanding of some difficult taxa relationships and their phylogeny.