Opportunistic Pathogenic Fungi of the House Dust in Turubah, Kingdom of Saudi Arabia

Total Page:16

File Type:pdf, Size:1020Kb

Opportunistic Pathogenic Fungi of the House Dust in Turubah, Kingdom of Saudi Arabia Australian Journal of Basic and Applied Sciences, 4(2): 122-126, 2010 ISSN 1991-8178 Opportunistic Pathogenic Fungi of the House Dust in Turubah, Kingdom of Saudi Arabia Al-Humiany, A.A. Department of Medical Microbiology, Faculty of Applied Medical Sciences, Taif University, Turubah, KSA Abstract: Xerophilic-, yeast-, thermophilic-, thermotolerant and keratinophilic fungi were isolated from house dust of Turubah, Taif, kSA. Thirty six samples were collected during November, 2009. Using the appropriate medium for each fungal group, 371x10³ CFU were recovered belonging to forty two taxa, in addition to five taxa of keratinophilic fungi. The most abundant molds are Aspergillus flavus, A. penicilloides, A. repens, Penicilium glabrum, Mucor racemosus. Aspergillus fumigatus, Rhizomucor pusillus, Thermomyces lanuginosus and Thermophymatospora fibuligera are the most thermotolerant and thermophilic molds. The most frequent yeast fungi are Candida albicans, Trichosporon cutaneum and Exophiala spinifera. Three geophilic dermatophytes namely; Trichophyton terrestre, Scopulariopsis brevicaulis and S. candida were isolated by human hair baiting technique. Many of the identified fungi are toxigenic, opportunistic pathogenic, pathogenic and/or antigenic. Regular cleaning of indoor environment is a must. Key words: Fungi, house dust, Turubah, KSA. INTRODUCTION Xerophilic fungi are among the major biological components of the house dust. Indoor fungi are able to propagate in almost any home (Bronswijk et al., 1986). Exposure to these fungi induces several human-health hazards. Allergy, bronchial asthma (Gent et al., 2009), superficial, deep- and systemic mycoses may induced especially in the immunocompromised persons (McGinis, 1980). Dust fungi play an important role in the dissemination of human diseases (Cooley et al., 2004). Several reports about fungal component of house dust allover the world are available e.g., in New Jersey (Schaffer et al., 1953); Britain (Davies, 1960 and Lustgraaf and Bronswijk, 1977); Cairo (Saad, 1985); Riyadh (Saad and El-Gindy, 1990); Germany (Ostrowski, 1999 and Kock et al., 2000); Polanda (Pastuska et al., 2000); Ontario ( Scott, 2001); Aden (El-Gindy et al., 2002); Taiwan (Su et al., 2001 and Wu et al., 2004); Argentina (Basilico et al., 2007) and Austria (Haas et al., 2007). Here, the fungi in the house dust of Turubah near Taif, KSA was investigated. MATERIALS AND METHODS Collection of House Dust Samples: Thirty six samples were collected from indoor of home at Turubah. Floor dust of bedrooms, living rooms, filters of air -conditions and window frames were mixed to give a composite sample for each home. Each dust sample was kept in clean plastic bag at 4-6o C until processed. Isolation of Fungi: Ten mg of each dust sample were transferred aseptically to 9 mm sterile Petri dish. Ten ml of the appropriate medium (45o C) were added, hand swirlled and left to solidify. Thermophilic fungi were isolated at 50o C for 4-6 days, while others were incubated at 28o C for 5-7 days. Count (C) of colony forming units per g dust (CFU/g dust), percentage of total count (% TC), number of cases of isolation (NCI) and occurrence remark (OR) were calculated. Media: Sabouraud’s glucose agar: (Peptone, 10 g; glucose, 40g and agar, 20g in 1000 ml tap water) was used for isolation xerophilic fungi. Corresponding Author: Al-Humiany, A.A., Department of Medical Microbiology, Faculty of Applied Medical Sciences, Taif University, Turubah, KSA. E-mail: [email protected] 122 Aust. J. Basic & Appl. Sci., 4(2): 122-126, 2010 Yeast glucose agar: (Yeast extract, 5g; glucose, 10g and agar, 20g in 1000 ml tap water) was used for isolation of thermophilic-, thermotolerant and yeast fungi. Isolation of keratinophilic fungi: The hair – baiting technique (Vanbreuseghem, 1952) was used for isolation of keratinophilic fungi. Choramphenicol (0.25gl ¹) was added to the adopted media to eliminate bacterial growth and to delay the appearance of fast growing fungi. Pure culture of the isolated fungi were identified according the following descriptive manuals, Morton and Smith (1963); Raper and Fennell (1965); Ajello (1968); Ames (1969); Rifai (1969); Ellis (1971 & 1976); Booth (1977); Domsch et al. (1980); Pitt (1985); Moubasher (1993) and Ho et al. (1999). RESULTS AND DISCUSSION House dust inhabiting fungi are an important group of indoor fungi that are able to propagate in almost any home (Bronswijk et al., 1986 and Portony et al., 2007). The total fungal load (CFU) per gram house dust was 3.71 x 105 in addition to keratinophilic fungi. Forty two fungal species belonging to twenty four genera were isolated from house dust of Turubah (Table 1 – 4). Among these fungi thirty species have human health risk. They may be opportunistic pathogens and ' or antigenic according to McGinis (1980). Most of these fungi have been previously reported from house dust (Schaffer et al., 1953; Davies, 1960; Lustgraaaf and Bronswijk, 1977; Saad, 1985; Bronswijk et al., 1986; Saad and El-Gindy, 1990; Ostrowski, 1999; koch et al., 2000; Scott, 2001; El-Gindy et al., 2002 and Wu et al., 2004). Results in Table (1) show that twenty species belonging to eleven genera were isolated .The most abundant fungi were Aspergillus flavus (10.32 %), Penicillium glabrum (9.4 %), A. penicilloides (7.06 %), A. repens (7.06 %) and Mucor racemosus (7.06 %). A. flavus has a worldwide distribution especially in tropics. It is highly toxigenic to humans and animals. Aflatoxins produced by this fungus are carcinogenic. It is associated with reports of asthma, aspergillosis and occasionally corneal-, otomycosis- and nasoorbital infections (Ostrowski, 1999). Penicillium glabrum is toxigenic and allergenic (McGinis, 1980). A. penicilloides and A. repens are xerophilic fungi associated with house dust mites and have a possible human and animal potential pathogenicity (Samson and Lustgraaf, 1978). Mucor, Rhizopus and Cunninghamella are involved in zygomycosis (McGinis, 1980). The health implication of other fungi will be mentioned instantly here after. F. solani is frequently involved in eye, skin and nail infections. Phoma glomerata cause phaeohyphomycosis. Trichoderma viride is toxigenic and pathogenic (McGinis, 1980). Aspergillus versicolor produces human toxigeni volatile metabolites at indoor environment (Pasanen et al., 1997). Concerning yeast-fungi, results in Table (2) show that five yeast species belonging to three genera were isolated (77x10³ CFU'g dust). These yeast fungi were reported in house dust of Cairo (Saad, 1985). Candida albicans and Trichosporon cutaneum were the most frequent comprising 38.96 and 35.84% of the total yeast count respectively. C. albicans is cosmopolitan in distribution with socio-economic environment differences. Mycosis caused by Candida is called candidiasis: oral, intestinal, vaginal, pulmonary and meningeal candidiasis (Winner and Hurley, 1964). Trichosporon cutaneum was isolated from house dust of Germany (Ostrowski, 1999). Candida guilliermondii was isolated from five house dust samples comprising 7.01 % of the total yeast count. It is the etiological agent of endocarditis ( Winner and Hurley, 1964). Exophiala exophiale was isolated from six dust samples while E. spinifera was isolated from seven samples comprising 7.53 and 10.64 % of the total yeast count respectively. These black yeasts were isolated from house dust of Cairo (Saad, 1985). They cause human skin phaeohyphomycosis (McGinis, 1980). Regarding thermophilous fungi, results in Table (3) show that their load was 76x10³ CFU'g dust. Twelve species belonging to nine genera were recovered. The most abundant fungi were Aspergillus fumigatus, Rhizomucor pusillus, Thermomyces lanuginosus and Thermophymatospora fibuligera, each comprising 10.78% of the total count of thermophilous fungi. The first two fungi were repeatedly isolated from house dust (Saad, 1985; Ostrowski, 1999 and Scott, 2001). Allergenic thermophilic fungi were isolated from house dust of asthmatics (Srinivasan et al., 2005). A. fumigatus is a mjor pathogen. It is responsible for about 90% of all invasive mold infections world-wide (Ostrowski, 1999 and Latge, 2003). R. pusipllus is involved in zygomycosis (McGinis, 1980). Thermophymatospora fibuligera was previously isolated from an Iraqi date palm plantation (Abdullah and Al-Bader, 1999). Thermomyces lanuginosus was the first established thermophile with worldwide distribution. The human health hazard of other opportunistic pathogenic thermophilous fungi will be mentioned hereafter instantly. Absidia corymbifera is involved in mucormycosis. Aspergillus terreus cause aspergillosis, cystic fibrosis, otomycosis and nail infections (McGinis, 1980). Concerning keratinophilic fungi results in Table (4) show their low occurrence (4-6 dust samples out of 36). Nectria haematococca is the teleomoph of Fusarium solani which is health hazardous fungus as mentioned before. Scopularopsis spp. are toxigenic, allergenic and can cause skin and nail infections. 123 Aust. J. Basic & Appl. Sci., 4(2): 122-126, 2010 Table 1: Number of Colony Forming Units (C) in Thousands Per g Dust , Percentage of Total Count (%TC) , Number of Cases of Isolation (NCI) and Occurrence Remark (OR) of Xerophilic House Dust Fungi. Fungi C %TC NCI OR* Aspergillus flavus** 22.5 10.32 18 L A. niger 5.4 2.47 5 L A . penicilloides** 15.4 7.06 8 M A.repens** 15.4 7.06 8 M A. versicolor** 8.2 3.76 6 H Chaetomium bostrychodes 5.4 2.47 5 L C. globosum** 5.4 2.47 5 L Cladosporium sphaerospermum** 8.2 3.76 7 L Cunninghamella elegans** 10.6 4.86 9 M Fusarium solani** 10.6 4.86 9 M Mucor mucedo** 10.6 4.86 10 M M. racemosus** 15.4 7.06 8 M Penicillium glabrum** 20.5 9.40 17 H P. verrucosum** 5.4 2.47 5 L P. purpurogenum 5.4 2.47 6 L Phoma glomerata** 10.6 4.86 8 M Rhizopus oryzae** 5.4 2.47 4 L R.stolonifer** 10.6 4.86 9 M Trichoderma viride** 6.4 2.93 5 L Wallemia sebi 10.6 4.86 8 M Total count 218.0 *Occurrence remark: H = High, 17 Cases out of 36; M = Moderate, 8- 16 Cases out of 36 and L = Low, 4-7 cases out of 36.
Recommended publications
  • Review of Oxepine-Pyrimidinone-Ketopiperazine Type Nonribosomal Peptides
    H OH metabolites OH Review Review of Oxepine-Pyrimidinone-Ketopiperazine Type Nonribosomal Peptides Yaojie Guo , Jens C. Frisvad and Thomas O. Larsen * Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads, Building 221, DK-2800 Kgs. Lyngby, Denmark; [email protected] (Y.G.); [email protected] (J.C.F.) * Correspondence: [email protected]; Tel.: +45-4525-2632 Received: 12 May 2020; Accepted: 8 June 2020; Published: 15 June 2020 Abstract: Recently, a rare class of nonribosomal peptides (NRPs) bearing a unique Oxepine-Pyrimidinone-Ketopiperazine (OPK) scaffold has been exclusively isolated from fungal sources. Based on the number of rings and conjugation systems on the backbone, it can be further categorized into three types A, B, and C. These compounds have been applied to various bioassays, and some have exhibited promising bioactivities like antifungal activity against phytopathogenic fungi and transcriptional activation on liver X receptor α. This review summarizes all the research related to natural OPK NRPs, including their biological sources, chemical structures, bioassays, as well as proposed biosynthetic mechanisms from 1988 to March 2020. The taxonomy of the fungal sources and chirality-related issues of these products are also discussed. Keywords: oxepine; nonribosomal peptides; bioactivity; biosynthesis; fungi; Aspergillus 1. Introduction Nonribosomal peptides (NRPs), mostly found in bacteria and fungi, are a class of peptidyl secondary metabolites biosynthesized by large modularly organized multienzyme complexes named nonribosomal peptide synthetases (NRPSs) [1]. These products are amongst the most structurally diverse secondary metabolites in nature; they exhibit a broad range of activities, which have been exploited in treatments such as the immunosuppressant cyclosporine A and the antibiotic daptomycin [2,3].
    [Show full text]
  • Safety of the Fungal Workhorses of Industrial Biotechnology: Update on the Mycotoxin and Secondary Metabolite Potential of Asper
    View metadata,Downloaded citation and from similar orbit.dtu.dk papers on:at core.ac.uk Mar 29, 2019 brought to you by CORE provided by Online Research Database In Technology Safety of the fungal workhorses of industrial biotechnology: update on the mycotoxin and secondary metabolite potential of Aspergillus niger, Aspergillus oryzae, and Trichoderma reesei Frisvad, Jens Christian; Møller, Lars L. H.; Larsen, Thomas Ostenfeld; Kumar, Ravi; Arnau, Jose Published in: Applied Microbiology and Biotechnology Link to article, DOI: 10.1007/s00253-018-9354-1 Publication date: 2018 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Frisvad, J. C., Møller, L. L. H., Larsen, T. O., Kumar, R., & Arnau, J. (2018). Safety of the fungal workhorses of industrial biotechnology: update on the mycotoxin and secondary metabolite potential of Aspergillus niger, Aspergillus oryzae, and Trichoderma reesei. Applied Microbiology and Biotechnology, 102(22), 9481-9515. DOI: 10.1007/s00253-018-9354-1 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Users may download and print one copy of any publication from the public portal for the purpose of private study or research. You may not further distribute the material or use it for any profit-making activity or commercial gain You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim.
    [Show full text]
  • Enzymatic Potential of Bacteria and Fungi Isolates from the Sewage Sludge Composting Process
    applied sciences Article Enzymatic Potential of Bacteria and Fungi Isolates from the Sewage Sludge Composting Process 1,2, 1,2 1,2, Tatiana Robledo-Mahón y , Concepción Calvo and Elisabet Aranda * 1 Institute of Water Research, University of Granada, Ramón y Cajal 4, 18071 Granada, Spain; [email protected] (T.R.-M.); [email protected] (C.C.) 2 Department of Microbiology, Pharmacy Faculty, University of Granada, Campus de Cartuja s/n, 18071 Granada, Spain * Correspondence: [email protected] Current address: Department of Agro-Environmental Chemistry and Plant Nutrition, y Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences, Kamýcká 129, 16500 Prague 6-Suchdol, Czech Republic. Received: 6 October 2020; Accepted: 2 November 2020; Published: 3 November 2020 Featured Application: Screening of suitable microorganisms adapted to environmental conditions are the challenges for the optimization of biotechnological processes in the current and near future. Some of the isolated microorganisms in this study possess biotechnological desirable features which could be employed in different processes, such as biorefinery, bioremediation, or in the food industry. Abstract: The aim of this study was the isolation and characterisation of the fungi and bacteria during the composting process of sewage sludge under a semipermeable membrane system at full scale, in order to find isolates with enzymatic activities of biotechnological interest. A total of 40 fungi were isolated and enzymatically analysed. Fungal culture showed a predominance of members of Ascomycota and Basidiomycota division and some representatives of Mucoromycotina subdivision. Some noticeable fungi isolated during the mesophilic and thermophilic phase were Aspergillus, Circinella, and Talaromyces.
    [Show full text]
  • Occurrence of the Toxin-Producing Aspergillus Versicolor Tiraboschi in Residential Buildings
    International Journal of Environmental Research and Public Health Article Occurrence of the Toxin-Producing Aspergillus versicolor Tiraboschi in Residential Buildings Marlena Piontek, Katarzyna Łuszczy ´nska* and Hanna Lechów Department of Applied Ecology, Faculty of Civil Engineering, Architecture and Environmental Engineering, Institute of Environmental Engineering, University of Zielona Góra, ul. Prof. Z. Szafrana 15, 65-516 Zielona Góra, Poland; [email protected] (M.P.); [email protected] (H.L.) * Correspondence: [email protected]; Tel.: +48-68-328-2681 Academic Editor: Paul B. Tchounwou Received: 15 June 2016; Accepted: 2 August 2016; Published: 31 August 2016 Abstract: In an area representative of a moderate climate zone (Lubuskie Province in Poland), mycological tests in over 270 flats demonstrated the occurrence of 82 species of moulds. Aspergillus versicolor Tiraboschi was often encountered on building partitions (frequency 4: frequently). The ability to synthesize the carcinogenic sterigmatocystin (ST) means that it poses a risk to humans and animals. Biotoxicological tests of biomasses of A. versicolor were conducted in the Microbiological and Toxicological Laboratory, using the planarians Dugesia tigrina (Girard). The obtained results of the tests covered a broad range of toxicity levels of isolated strains: from weakly toxic (100–1000 mg·L−3) to potently toxic (1–10 mg·L−3). The high-performance liquid chromatography (HPLC) physicochemical method confirmed the ability of A. versicolor strains to synthesize sterigmatocystin. All of the samples of the air-dry biomasses of the fungi contained ST in the range between 0.03 and 534.38 mg·kg−1. In the bio-safety level (BSL) classification A.
    [Show full text]
  • Cladosporium Mold
    GuideClassification to Common Mold Types Hazard Class A: includes fungi or their metabolic products that are highly hazardous to health. These fungi or metabolites should not be present in occupied dwellings. Presence of these fungi in occupied buildings requires immediate attention. Hazard class B: includes those fungi which may cause allergic reactions to occupants if present indoors over a long period. Hazard Class C: includes fungi not known to be a hazard to health. Growth of these fungi indoors, however, may cause eco- nomic damage and therefore should not be allowed. Molds commonly found in kitchens and bathrooms: • Cladosporium cladosporioides (hazard class B) • Cladosporium sphaerospermum (hazard class C) • Ulocladium botrytis (hazard class C) • Chaetomium globosum (hazard class C) • Aspergillus fumigatus (hazard class A) Molds commonly found on wallpapers: • Cladosporium sphaerospermum • Chaetomium spp., particularly Chaetomium globosum • Doratomyces spp (no information on hazard classification) • Fusarium spp (hazard class A) • Stachybotrys chartarum, commonly called ‘black mold‘ (hazard class A) • Trichoderma spp (hazard class B) • Scopulariopsis spp (hazard class B) Molds commonly found on mattresses and carpets: • Penicillium spp., especially Penicillium chrysogenum (hazard class B) and Penicillium aurantiogriseum (hazard class B) • Aspergillus versicolor (hazard class A) • Aureobasidium pullulans (hazard class B) • Aspergillus repens (no information on hazard classification) • Wallemia sebi (hazard class C) • Chaetomium
    [Show full text]
  • Aspergillus and Penicillium Identification Using DNA Sequences: Barcode Or MLST?
    Appl Microbiol Biotechnol (2012) 95:339–344 DOI 10.1007/s00253-012-4165-2 MINI-REVIEW Aspergillus and Penicillium identification using DNA sequences: barcode or MLST? Stephen W. Peterson Received: 28 March 2012 /Revised: 9 May 2012 /Accepted: 10 May 2012 /Published online: 27 May 2012 # Springer-Verlag (outside the USA) 2012 Abstract Current methods in DNA technology can detect several commodities. Aspergillus fumigatus, Aspergillus single nucleotide polymorphisms with measurable accuracy flavus, Aspergillus terreus (Walsh et al. 2011), and using several different approaches appropriate for different Talaromyces (syn. 0 Penicillium) marneffei (Sudjaritruk uses. If there are even single nucleotide differences that are et al. 2012) are recognized opportunistic pathogens of humans, invariant markers of the species, we can accomplish identifi- especially those with weakened immune systems. Aspergillus cation through rapid DNA-based tests. The question of whether niger is used for the production of enzymes and citric acid we can reliably detect and identify species of Aspergillus and (e.g., Dhillon et al. 2012), Aspergillus oryzae is used to pro- Penicillium turns mainly upon the completeness of our alpha duce soy sauce, Penicillium roqueforti ripens blue cheeses and taxonomy, our species concepts, and how well the available penicillin is produced by Penicillium chrysogenum (e.g., Xu et DNA data coincide with the taxonomic diversity in the family al. 2012). Heat-resistant Byssochlamys species can grow in Trichocomaceae. No single gene is yet known that is invariant pasteurized fruit juices (Sant’ana et al. 2010). These genera within species and variable between species as would be opti- along with a few others comprise the family Trichocomaceae.
    [Show full text]
  • Spergilli on Building Partitions Infested with Moulds in Residential Housing and Public Utility Premises
    CIVIL AND ENVIRONMENTAL ENGINEERING REPORTS ISSN 2080-5187 CEER 2017; 27 (4): 091-104 DOI: 10.1515/ceer-2017-0053 Original Research Article SPERGILLI ON BUILDING PARTITIONS INFESTED WITH MOULDS IN RESIDENTIAL HOUSING AND PUBLIC UTILITY PREMISES Marlena PIONTEK1, Katarzyna ŁUSZCZYŃSKA, Hanna LECHÓW University of Zielona Gora, Zielona Góra, Poland A b s t r a c t Aspergilli constitute a serious risk to the health of the inhabitants of infested rooms. Mycological analysis conducted in buildings infected with moulds in the area of the Lubuskie province (Poland) demonstrated the presence of 9 species of Aspergillus moulds: A. carbonarius A. clavatus, A. flavus, A. fumigatus, A. niger, A. ochraceus, A. terreus, A ustus and A. versicolor. The highest frequency (4 - frequently) was observed in the case of A. versicolor, while frequency 3 (fairly frequently) was characteristic of such species as A. flavus and A. niger. A. ustus was encountered with frequency 2 (individually), while frequency 1 (sporadically) referred to four species: A. carbonarius, A. clavatus, A. fumigatus and A. terreus. Because Aspergillus versicolor occurs with the highest frequency in buildings, and as a consequence of this, synthesizes toxic and carcinogenic sterigmatocystin (ST), it constitutes the greatest risk to the inhabitants of the infested premises. All species of Aspergillus present on building partitions are able to synthesise mycotoxins, are pathogens and may cause allergies. Keywords: Aspergillus species, mycotoxins, residential housing 1. INTRODUCTION The occurrence of moulds on building partitions is a problem whose severity has been increasing in many countries, not just in Poland. This 1 Corresponding author: University of Zielona Gora, Faculty of Civil Engineering, Architecture and Environmental Engineering, Institute of Environmental Engineering, Department of Applied Ecology, Z.
    [Show full text]
  • Polyphasic Taxonomy of Aspergillus Section Usti
    available online at www.studiesinmycology.org STUDIE S IN MYCOLOGY 59: 107–128. 2007. doi:10.3114/sim.2007.59.12 Polyphasic taxonomy of Aspergillus section Usti J. Houbraken1, M. Due2, J. Varga1,3, M. Meijer1, J.C. Frisvad2 and R.A. Samson1 1CBS Fungal Biodiversity Centre, PO Box 85167 , NL-3508 AD Utrecht, the Netherlands; 2BioCentrum-DTU, Søltofts Plads, Building 221, Technical University of Denmark, DK- 2800 Kgs. Lyngby, Denmark; 3Department of Microbiology, Faculty of Science and Informatics, University of Szeged, H-6701 Szeged, P.O. Box 533, Hungary *Correspondence: J. Houbraken, [email protected] Abstract: Aspergillus ustus is a very common species in foods, soil and indoor environments. Based on chemical, molecular and morphological data, A. insuetus is separated from A. ustus and revived. A. insuetus differs from A. ustus in producing drimans and ophiobolin G and H and not producing ustic acid and austocystins. The molecular, physiological and morphological data also indicated that another species, A. keveii sp. nov. is closely related but distinct from A. insuetus. Aspergillus section Usti sensu stricto includes 8 species: A. ustus, A. puniceus, A. granulosus, A. pseudodeflectus, A. calidoustus, A. insuetus and A. keveii together with Emericella heterothallica. Taxonomic novelties: Aspergillus insuetus revived, Aspergillus keveii sp. nov. Key words: actin, Aspergillus, β-tubulin, calmodulin, extrolite profiles, ITS, phylogenetics, polyphasic taxonomy. INTRODUCTION β-tubulin, calmodulin and actin genes, analysis of extrolite profiles, and macro- and micromorphological analysis of the isolates. Aspergillus ustus is a very common filamentous fungus found in foods, soil and indoor air environments (Samson et al. 2002).
    [Show full text]
  • Diversity and Control of Spoilage Fungi in Dairy Products: an Update
    microorganisms Review Diversity and Control of Spoilage Fungi in Dairy Products: An Update Lucille Garnier 1,2 ID , Florence Valence 2 and Jérôme Mounier 1,* 1 Laboratoire Universitaire de Biodiversité et Ecologie Microbienne (LUBEM EA3882), Université de Brest, Technopole Brest-Iroise, 29280 Plouzané, France; [email protected] 2 Science et Technologie du Lait et de l’Œuf (STLO), AgroCampus Ouest, INRA, 35000 Rennes, France; fl[email protected] * Correspondence: [email protected]; Tel.: +33-(0)2-90-91-51-00; Fax: +33-(0)2-90-91-51-01 Received: 10 July 2017; Accepted: 25 July 2017; Published: 28 July 2017 Abstract: Fungi are common contaminants of dairy products, which provide a favorable niche for their growth. They are responsible for visible or non-visible defects, such as off-odor and -flavor, and lead to significant food waste and losses as well as important economic losses. Control of fungal spoilage is a major concern for industrials and scientists that are looking for efficient solutions to prevent and/or limit fungal spoilage in dairy products. Several traditional methods also called traditional hurdle technologies are implemented and combined to prevent and control such contaminations. Prevention methods include good manufacturing and hygiene practices, air filtration, and decontamination systems, while control methods include inactivation treatments, temperature control, and modified atmosphere packaging. However, despite technology advances in existing preservation methods, fungal spoilage is still an issue for dairy manufacturers and in recent years, new (bio) preservation technologies are being developed such as the use of bioprotective cultures. This review summarizes our current knowledge on the diversity of spoilage fungi in dairy products and the traditional and (potentially) new hurdle technologies to control their occurrence in dairy foods.
    [Show full text]
  • Downloaded from Genbank (Results Not Shown)
    Botanica Marina 2021; 64(4): 289–300 Research article Ami Shaumi, U-Cheng Cheang, Chieh-Yu Yang, Chic-Wei Chang, Sheng-Yu Guo, Chien-Hui Yang, Tin-Yam Chan and Ka-Lai Pang* Culturable fungi associated with the marine shallow-water hydrothermal vent crab Xenograpsus testudinatus at Kueishan Island, Taiwan https://doi.org/10.1515/bot-2021-0034 recorded fungi on X. testudinatus are reported pathogens of Received April 19, 2021; accepted June 21, 2021; crabs, but some have caused diseases of other marine ani- published online July 7, 2021 mals. Whether the crab X. testudinatus is a vehicle of marine fungal diseases requires further study. Abstract: Reportsonfungioccurringonmarinecrabshave been mostly related to those causing infections/diseases. To Keywords: Arthropoda; asexual fungi; crustacea; Euro- better understand the potential role(s) of fungi associated tiales; marine fungi. with marine crabs, this study investigated the culturable di- versity of fungi on carapace of the marine shallow-water hydrothermal vent crab Xenograpsus testudinatus collected at Kueishan Island, Taiwan. By sequencing the internal 1 Introduction transcribedspacerregions(ITS),18Sand28SoftherDNAfor identification, 12 species of fungi were isolated from 46 in- Kueishan Island (also known as Turtle Island with reference to dividuals of X. testudinatus: Aspergillus penicillioides, itsshape)isanactivevolcanosituated at the northeastern end Aspergillus versicolor, Candida parapsilosis, Cladosporium ofthemainTaiwanisland.Atoneendoftheisland,ashallow- cladosporioides, Mycosphaerella sp., Parengyodontium water hydrothermal vent system is present with roughly 50 album, Penicillium citrinum, Penicillium paxili, Stachylidium hydrothermal vents, where hydrothermal fluids (between 48 bicolor, Zasmidium sp. (Ascomycota), Cystobasidium calyp- and 116 °C) and volcanic gases (carbon dioxide and hydrogen togenae and Earliella scabrosa (Basidiomycota).
    [Show full text]
  • Drivers of Genetic Diversity in Secondary Metabolic Gene Clusters in a Fungal Population 5 6 7 8 Abigail L
    bioRxiv preprint doi: https://doi.org/10.1101/149856; this version posted July 11, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 2 3 4 Drivers of genetic diversity in secondary metabolic gene clusters in a fungal population 5 6 7 8 Abigail L. Lind1, Jennifer H. Wisecaver2, Catarina Lameiras3, Philipp Wiemann4, Jonathan M. 9 Palmer5, Nancy P. Keller4, Fernando Rodrigues6,7, Gustavo H. Goldman8, Antonis Rokas1,2 10 11 12 1. Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, 13 Tennessee, USA. 14 2. Department of Biology, Vanderbilt University, Nashville, Tennessee, USA. 15 3. Department of Microbiology, Portuguese Oncology Institute of Porto, Porto, Portugal 16 4. Department of Medical Microbiology & Immunology, University of Wisconsin-Madison, 17 Madison, Wisconsin, USA 18 5. Center for Forest Mycology Research, Northern Research Station, US Forest Service, Madison, 19 Wisconsin, USA 20 6. Life and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, 21 Braga, Portugal 22 7. ICVS/3B's - PT Government Associate Laboratory, Braga/Guimarães, Portugal. 23 8. Faculdade de Ciências Farmacêuticas de Ribeirão Preto, Universidade de São Paulo, São 24 Paulo, Brazil 25 †Corresponding author and lead contact: [email protected] 26 bioRxiv preprint doi: https://doi.org/10.1101/149856; this version posted July 11, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity.
    [Show full text]
  • Phylogeny, Identification and Nomenclature of the Genus Aspergillus
    available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 78: 141–173. Phylogeny, identification and nomenclature of the genus Aspergillus R.A. Samson1*, C.M. Visagie1, J. Houbraken1, S.-B. Hong2, V. Hubka3, C.H.W. Klaassen4, G. Perrone5, K.A. Seifert6, A. Susca5, J.B. Tanney6, J. Varga7, S. Kocsube7, G. Szigeti7, T. Yaguchi8, and J.C. Frisvad9 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, NL-3584 CT Utrecht, The Netherlands; 2Korean Agricultural Culture Collection, National Academy of Agricultural Science, RDA, Suwon, South Korea; 3Department of Botany, Charles University in Prague, Prague, Czech Republic; 4Medical Microbiology & Infectious Diseases, C70 Canisius Wilhelmina Hospital, 532 SZ Nijmegen, The Netherlands; 5Institute of Sciences of Food Production National Research Council, 70126 Bari, Italy; 6Biodiversity (Mycology), Eastern Cereal and Oilseed Research Centre, Agriculture & Agri-Food Canada, Ottawa, ON K1A 0C6, Canada; 7Department of Microbiology, Faculty of Science and Informatics, University of Szeged, H-6726 Szeged, Hungary; 8Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba 260-8673, Japan; 9Department of Systems Biology, Building 221, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark *Correspondence: R.A. Samson, [email protected] Abstract: Aspergillus comprises a diverse group of species based on morphological, physiological and phylogenetic characters, which significantly impact biotechnology, food production, indoor environments and human health. Aspergillus was traditionally associated with nine teleomorph genera, but phylogenetic data suggest that together with genera such as Polypaecilum, Phialosimplex, Dichotomomyces and Cristaspora, Aspergillus forms a monophyletic clade closely related to Penicillium. Changes in the International Code of Nomenclature for algae, fungi and plants resulted in the move to one name per species, meaning that a decision had to be made whether to keep Aspergillus as one big genus or to split it into several smaller genera.
    [Show full text]