Botryosphaeria Berengeriana F.Sp. Piricola
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First Report of Grapevine Dieback Caused by Lasiodiplodia Theobromae and Neoscytalidium Dimidiatum in Basrah, Southern Iraq
African Journal of Biotechnology Vol. 11(95), pp. 16165-16171, 27 November, 2012 Available online at http://www.academicjournals.org/AJB DOI: 10.5897/AJB12.010 ISSN 1684–5315 ©2012 Academic Journals Full Length Research Paper First report of grapevine dieback caused by Lasiodiplodia theobromae and Neoscytalidium dimidiatum in Basrah, Southern Iraq Abdullah H. Al-Saadoon1, Mohanad K. M. Ameen1, Muhammed A. Hameed2* Adnan Al-Badran1 and Zulfiqar Ali3 1Department of Biology, College of Science, Basrah University, Iraq. 2Date Palm Research Centre, Basra University, Iraq. 3Departments of Plant Breeding and Genetics, University of Agriculture, Faisalabad 38040, Pakistan. Accepted 30 March, 2012 In Basrah, grapevines suffer from dieback. Lasiodiplodia theobromae and Neoscytalidium dimidiatum were isolated from diseased grapevines, Vitis vinifera L. and identified based on morphological characteristics and DNA sequence data of the rDNA internal transcribed spacer (ITS) region. The results of the pathogenicity test conducted under greenhouse conditions for L. theobromae and N. dimidiatum reveal that both species were the causal agents of grapevines diebacks in Basrah, Southern Iraq. A brief description is provided for the isolated species. Key words: grapevine, dieback, Lasiodiplodia theobromae, Neoscytalidium dimidiatum, internal transcribed spacer (ITS), rDNA, Iraq. INTRODUCTION Grapevine, Vitis vinifera L. is the most widely planted fruit thern part of Haur Al-Hammar (at Qarmat Ali) to a new crop worldwide and is cultivated in all continents except canal, the “Al-Basrah Canal”, which runs parallel to Shatt Antarctica (Mullins et al., 1992). The area under planta- Al-Arab river into the Arabian Gulf (Bedair, 2006). Many tion in iraq is 240,000 hectares, and it has an annual environmental stress factors weaken plant hosts and production of 350,000 tons grape (FAO, 1996). -
Botryosphaeria Dothidea
Hu et al. IMA Fungus (2019) 10:3 https://doi.org/10.1186/s43008-019-0008-4 IMA Fungus RESEARCH Open Access Comprehensive analysis of full genome sequence and Bd-milRNA/target mRNAs to discover the mechanism of hypovirulence in Botryosphaeria dothidea strains on pear infection with BdCV1 and BdPV1 Wangcheng Hu1,2,3†, Hui Luo1,2,3†, Yuekun Yang1,2,3, Qiong Wang1,2,3, Ni Hong1,2,3, Guoping Wang1,2,3, Aiming Wang4 and Liping Wang1,2,3* Abstract Pear ring rot disease, mainly caused by Botryosphaeria dothidea, is widespread in most pear and apple-growing regions. Mycoviruses are used for biocontrol, especially in fruit tree disease. BdCV1 (Botryosphaeria dothidea chrysovirus 1) and BdPV1 (Botryosphaeria dothidea partitivirus 1) influence the biological characteristics of B. dothidea strains. BdCV1 is a potential candidate for the control of fungal disease. Therefore, it is vital to explore interactions between B. dothidea and mycovirus to clarify the pathogenic mechanisms of B. dothidea and hypovirulence of B. dothidea in pear. A high- quality full-length genome sequence of the B. dothidea LW-Hubei isolate was obtained using Single Molecule Real- Time sequencing. It has high repeat sequence with 9.3% and DNA methylation existence in the genome. The 46.34 Mb genomes contained 14,091 predicted genes, which of 13,135 were annotated. B. dothidea was predicted to express 3833 secreted proteins. In bioinformatics analysis, 351 CAZy members, 552 transporters, 128 kinases, and 1096 proteins associated with plant-host interaction (PHI) were identified. RNA-silencing components including two endoribonuclease Dicer, four argonaute (Ago) and three RNA-dependent RNA polymerase (RdRp) molecules were identified and expressed in response to mycovirus infection. -
Grapevine Trunk Diseases Symptoms and Distribution
Grapevine Trunk Diseases symptoms and distribution Background Grapevine trunk diseases are caused by fungal pathogens that grow primarily in mature wood. These can infect either: 1. propagation material and affect growth of newly planted vines; or 2. established vines through wounds (primarily pruning wounds) causing a loss of productivity, often as grapevines reach elite stage of maturity. Grapevine trunk diseases affect vineyard productivity through: ■ increased production cost; ■ yield loss and reduced quality; Figure 1 Botryosphaeria dieback causes dead arm or dieback of the cordons and and trunk. ■ decreased vineyard longevity. Photograph: Wayne Pitt The most prevalent grapevine trunk Symptoms diseases in Australia are: The two diseases are often mistaken 1. botryosphaeria dieback for each other because some of the (formerly known as bot canker); symptoms are identical (Table 1). Fungi and enter the vine via pruning wounds or 2. eutypa dieback. other exposed areas causing dieback Botryosphaeria dieback is caused of the grapevine often described as by a number of species within the dead arm (Figure 1). Damage to the Botryosphaeriaceae family. These vascular system results in the loss of fungi infect a wide range of hosts spur positions along the cordon and but are most commonly associated may progress to the trunk (Figure 2). with diseases of woody plants such Wedge-shaped cankers in the trunks as acacia and eucalyptus. Several and cordons of declining grapevines Botryosphaeriaceae species are visible upon cross sectioning are found in most grape growing regions characteristic of both diseases of Australia. (Figure 3). Eutypa dieback is caused by the Other symptoms may include: fungus Eutypa lata. -
What Do We Know About Botryosphaeriaceae? an Overview of a Worldwide Cured Dataset
Review What Do We Know about Botryosphaeriaceae? An Overview of a Worldwide Cured Dataset Eduardo Batista , Anabela Lopes and Artur Alves * CESAM, Departamento de Biologia, Universidade de Aveiro, 3810-193 Aveiro, Portugal; [email protected] (E.B.); [email protected] (A.L.) * Correspondence: [email protected] Abstract: Botryosphaeriaceae-related diseases occur worldwide in a wide variety of plant hosts. The number of studies targeting the distribution, diversity, ecology, and pathogenicity of Botryosphaeri- aceae species are consistently increasing. However, with the lack of consistency in species delimita- tion, the name of hosts, and the locations of studies, it is almost impossible to quantify the presence of these species worldwide, or the number of different host–fungus interactions that occur. In this re- view, we collected and organized Botryosphaeriaceae occurrences in a single cured dataset, allowing us to obtain for the first time a complete perspective on species’ global diversity, dispersion, host association, ecological niches, pathogenicity, communication efficiency of new occurrences, and new host–fungus associations. This dataset is freely available through an interactive and online applica- tion. The current release (version 1.0) contains 14,405 cured isolates and 2989 literature references of 12,121 different host–fungus interactions with 1692 different plant species from 149 countries. Keywords: Botryosphaeriaceae; fungal diversity; host jumps; pathogenicity; ecological niches; quarantine measures Citation: Batista, E.; Lopes, A.; Alves, A. What Do We Know about Botryosphaeriaceae? An Overview of a Worldwide Cured Dataset. Forests 1. Introduction 2021, 12, 313. https://doi.org/ Species of Botryosphaeriaceae (Botryosphaeriales, Ascomycetes) are distributed world- 10.3390/f12030313 wide and are known to have different ecological roles. -
Botryosphaeriaceae As Endophytes and Latent Pathogens of Woody Plants: Diversity, Ecology and Impact
fungal biology reviews 21 (2007) 90–106 journal homepage: www.elsevier.com/locate/fbr Review Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact Bernard SLIPPERS*, Michael J WINGFIELD Department of Genetics, Centre of Excellence in Tree Health Biotechnology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, South Africa abstract Keywords: In many respects, the ecology of members of the Botryosphaeriaceae compare to general Botryosphaeria patterns observed for the collective of endophytes of woody plants. These include high Botryosphaeriaceae levels of diversity, horizontal transmission a spatial structure and a continuum of levels Emerging tree diseases of host affinity from specific to very broad. Some members of the Botryosphaeriaceae Endophyte are, however, among the most aggressive pathogens in the assemblages of common endo- Latent pathogen phytic fungi, often killing large parts of their host, following physical damage or general Quarantine stress on the host (and over large areas). Their wide occurrence, the latent phase which Tree health can be overlooked by quarantine, and their ability to rapidly cause disease when their hosts are under stress, make these fungi a significant threat to agricultural, plantation and native forest ecosystems alike. This is especially relevant under emerging conditions of dramatic climate change that increases stress on plant communities. It is, therefore, important to maximize our understanding of the ecology and pathology of the Botryosphaeriaceae, par- ticularly as it relates to their endophytic nature, species richness, host switching ability and the host-fungus-environment interaction. ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. 1. -
BOTRYOSPHAERIA TREE FUNGAL PATHOGENS and THEIR DIVERSITY Awendu A
Int. J. Phytopathol. 10 (01) 2021. 49-56 DOI: 10.33687/phytopath.010.01.3447 Available Online at EScience Press International Journal of Phytopathology ISSN: 2312-9344 (Online), 2313-1241 (Print) https://esciencepress.net/journals/phytopath BOTRYOSPHAERIA TREE FUNGAL PATHOGENS AND THEIR DIVERSITY aWendu A. Darge, bSamuel S. Woldemariam a Centeral Ethiopia Environment and Forest Research Center, Ethiopia. b Faculty of Natural and Computational Science, University of Gondar, Gondar, Ethiopia. A R T I C L E I N F O A B S T R A C T Article History The genus Botryosphaeria identified in 1863 as saprophytes of dead tissue of woody Received: December 08, 2020 plants have been described as pathogens of economically important plantation trees Revised: January 31, 2021 in agriculture and native forests. The genus is a species-rich, worldwide distributed Accepted: March 27, 2021 occurring on diverse host ranges. Species of the Botryosphaeria are reported as the pathogens of many plantation trees, including species of Acacia, Eucalyptus, and Keywords Pinus causing canker and rapid dieback diseases which often end up in death. Botryosphaeria dothidea Botryosphaeria fungal pathogens have cross pathogenicity on different host tree Ascomycetes species which enables them important and focus area of research. The taxonomy of Eucalyptus plant spp. Botryosphaeria spp. have been under research, identification of these fungi has Stress generally been based on morphological features of the anamorph that usually seen under the microscope. Characters that are used to classify genera in the Botryosphaeria have mostly relied on the macroscopic features of the ascospores and the conidial features. Currently, molecular techniques such as DNA sequencing involving amplification of ITS region are important for exact identification of the genera to species level. -
Grapevine Trunk Diseases. a Review Month : April Year : 2016
Grapevine Trunk Diseases. A review Month : April Year : 2016 Warning This document has not been submitted to the step Procedure for Examining Resolutions and cannot in any way be treated as an OIV resolution. Only resolutions adopted by the Member States of the OIV have an official statute. This document represents the consensus reached by the members of the Viticulture Commission of the OIV. This document, drafted and developed on the initiative of the OIV, is a collective experts’ report. OIV.INT © Grapevine Trunk Diseases. A review Crédit Photo. Philippe Larignon, 2012. Scope Grapevine trunk diseases (GTD) are currently considered one of the most relevant challenges for the viticulture. These destructive diseases cause in vineyards several damages every year, and they are of rapidly growing concern in all wine producing countries. In 2006, the OIV established a resolution about some principal measures used to prevent or limit the proliferation of wood diseases (resolution OIV- VITI 2/2006), and minor references in CST 1/2008 and CST2/2011 OIV resolutions. Recently, a new initiative has arisen inside the OIV group "vine protection and viticultural technics (PROTEC)" concerning to the development and impact of main trunk diseases, and their different alternatives to control or mitigation of their spread and damage at an international level of the cultivated Vitis species. The following document, which could be updated in the future on further editions, attempts to describe the state of art in this field, and was drafted in collaboration with the members of the International Council on Grapevine Trunk Diseases (ICGTD) by the following research group: Coordinator: Mario de la Fuente (OIV) Authors: Florence Fontaine (France) David Gramaje (Spain) Crédit Photo. -
Plant Pathology Circular No. 272 Fla. Dept. Agric. & Consumer Serv. June
Plant Pathology Circular No. 272 Fla. Dept. Agric. & Consumer Serv. June 1985 Division of Plant Industry BLACK ROT OF APPLE N. E. El-Gholl and S. A. Alfieri, Jr.l The apple (Malus sylvestris Mill.), both wild and cultivated, has been enjoyed by man since prehistoric times. Wild apples were once widespread in the forests of Asia Minor, the Caucasus, Turkey, and Iran, even as far east as the Himalayan region, and the entire Old World (4). Apples were introduced into the New World by early settlers who brought seeds with them from Europe, and the apple tree now grows from Washington state to North Georgia. Further penetration southward had not been previously possible. However, sufficient low-chilling requirement apples (300-400 hours below 45°F) are now available which will produce acceptable apples in subtropical Central Florida (3,7,8). The following cultivars have been found to be climatically adapted to Florida. 'Mayan' (recommended for trial in north Florida), 'Anna' (Florida's most widely planted apple), 'Dorsett Golden' (presently 'Anna's' best pollinator), 'Ein Shemer' (less prolific in bearing and growth habit), 'Elah' (very precocious and prolific), 'Michal' (has resistance to leaf diseases), and 'Schlomit' (3,7,8). Of the diseases affecting M. sylvestris, black rot is considered one of the most important apple diseases in the southeastern United States (10). SYMPTOMS AND SIGNS: Fruit lesions start as small brown spots, frequently at a wormhole, but darken and turn black as they expand. There is usually one lesion to an apple (Fig. 1), often at the calyx end, with concentric zones of black and brown, containing minute black, carbonaceous pycnidia (Fig. -
Multiple Botryosphaeria Species Causing 'Dothiorella' Gummosis In
CRB Funded Research Reports 2010 Research Project Progress Report Multiple Botryosphaeria species causing ‘Dothiorella’ gummosis in citrus Anthony Adesemoye, Akif Eskalen, Ben Faber and Neil O’Connell he occurrence of branch or trunk cankers on citrus counties in California, namely Fresno, Riverside, San Diego, caused by members of the Botryosphaeriaceae is San Luis Obispo (SLO), Tulare and Ventura. The branches Tknown as Dothiorella gummosis due to the gum or sap were transported on ice to the laboratory at the University that may exude from the canker. Symptoms include grayish of California Riverside (UCR). to brown discoloration on the bark, which could extend into Small pieces of cankered woody tissue were plated onto the xylem (Fig. 1). growth media, and different isolates of Botryosphaeria were Though Dothiorella gummosis is viewed as a minor disease obtained from them. Isolates were identified using morphol- in citrus, in advanced stages it can lead to serious decline or ogy and molecular methods. The molecular methods included death of branches, and in the case of young trees cause plant the use of three different molecular markers (Internal Tran- death. In a variety of woody hosts, many members of the scribed Spacer [ITS], Beta Tubulin, and Translation Elongation Botryosphaeriaceae are known to cause branch and trunk Factor). This was followed by sequencing, which was done at cankers and occasionally contribute to stem-end rot. the UCR Genomics Core facility. The sequences obtained Dothiorella gregaria (teleomorph: Botryosphaeria ribis) were then compared to the GenBank. was long believed to be the pathogen causing Dothiorella Teleomorph is a sexual reproductive stage, while ana- gummosis. -
Botryosphaeria Dothidea and Neofusicoccum Yunnanense Causing Canker and Die-Back of Sequoiadendron Giganteum in Croatia
Article Botryosphaeria Dothidea and Neofusicoccum Yunnanense Causing Canker and Die-Back of Sequoiadendron Giganteum in Croatia Marta Kovaˇc 1 , Danko Dimini´c 2, Saša Orlovi´c 3 and Milica Zlatkovi´c 3,* 1 Croatian Forest Research Institute, Cvjetno Naselje 41, 10450 Jastrebarsko, Croatia; [email protected] 2 Faculty of Forestry and Wood Technology, University of Zagreb, Svetošimunska Cesta 23, 10000 Zagreb, Croatia; [email protected] 3 Institute of Lowland Forestry and Environment (ILFE), University of Novi Sad, Antona Cehovaˇ 13d, 21000 Novi Sad, Serbia; [email protected] * Correspondence: [email protected]; Tel.: +381-21-540-383 Abstract: Sequoiadendron giganteum Lindl. [Buchholz] is a long-lived tree species endemic to the Sierra Nevada Mountains in California. Due to its massive size and beauty, S. giganteum is a popular ornamental tree planted in many parts of the world, including Europe. Since 2017, scattered branch die-back has been observed on S. giganteum trees in Zagreb, Croatia. Other symptoms included resinous branch cankers, reddish-brown discoloration of the sapwood and, in severe cases, crown die-back. Branches showing symptoms of die-back and cankers were collected from six S. giganteum trees in Zagreb and the aim of this study was to identify the causal agent of the disease. The constantly isolated fungi were identified using morphology and phylogenetic analyses based on the internal transcribed spacer (ITS) of the ribosomal DNA (rDNA), and partial sequencing of two housekeeping Citation: Kovaˇc, M.; Dimini´c, D.; genes, i.e., translation elongation factor 1-α (TEF 1-α), and β tubulin 2 (TUB2). The fungi were Orlovi´c, S.; Zlatkovi´c, M. -
Towards an Integrated Control of Peach Powdery Mildew
Towards an integrated control of peach powdery mildew (Podosphaera pannosa) through the application of molecular tools in epidemiological and genetic resistance studies Neus Marimon de María http://hdl.handle.net/10803/670300 ADVERTIMENT. L'accés als continguts d'aquesta tesi doctoral i la seva utilització ha de respectar els drets de la persona autora. Pot ser utilitzada per a consulta o estudi personal, així com en activitats o materials d'investigació i docència en els termes establerts a l'art. 32 del Text Refós de la Llei de Propietat Intel·lectual (RDL 1/1996). Per altres utilitzacions es requereix l'autorització prèvia i expressa de la persona autora. En qualsevol cas, en la utilització dels seus continguts caldrà indicar de forma clara el nom i cognoms de la persona autora i el títol de la tesi doctoral. No s'autoritza la seva reproducció o altres formes d'explotació efectuades amb finalitats de lucre ni la seva comunicació pública des d'un lloc aliè al servei TDX. Tampoc s'autoritza la presentació del seu contingut en una finestra o marc aliè a TDX (framing). Aquesta reserva de drets afecta tant als continguts de la tesi com als seus resums i índexs. ADVERTENCIA. El acceso a los contenidos de esta tesis doctoral y su utilización debe respetar los derechos de la persona autora. Puede ser utilizada para consulta o estudio personal, así como en actividades o materiales de investigación y docencia en los términos establecidos en el art. 32 del Texto Refundido de la Ley de Propiedad Intelectual (RDL 1/1996). Para otros usos se requiere la autorización previa y expresa de la persona autora. -
Willow Botryosphaeria
Cankers caused by Botryosphaeria and related fungi Introduction Willows (Salix spp.) are susceptible to several canker diseases that cause blighting of new shoots and girdling of branches and stems. Cankers initiated by a complex of fungi in the genus Botryosphaeria appear to be the most common in short rotation willow plantations of NY State. These fungi are opportunistic pathogens that incite cankers on branches, stems, and/or twigs as well as cause dieback on susceptible willows. Infection Canker caused by a Botryosphaeria spp. on Salix (Tully, NY). often occurs when willow shrubs are predisposed by species often are indistinguishable without molecular environmental stressors (e.g., drought and frost damage), identification. Two species, B. dothidea and B. ribis, are insect defoliation, or wounding. known pathogens of willow in the eastern United States. One confusing feature of various species of Therefore, the information provided here is specific to B. Botryosphaeria is that many have asexual stages that dothidea and B. ribis. are morphologically very different from other species in the genus Botryosphaeria. Even though the sexual Host (s) and Distribution stages of the two most prominent willow pathogens in New York have numerous similarities, their asexual Botryosphaeria dothidea and B. ribis have a worldwide stages are markedly different. Therefore,Botryosphaeria distribution and extremely broad host ranges. Collectively, these fungi are known to attack approximately 170 species of plants including woody angiosperms and coniferous tree species. Historical records from the eastern United States indicate that B. ribis has been collected on apple, currant, elderberry, elm, grape, horse chestnut, oak, pear, rose, sweetgum, tulip magnolia, walnut, and willow.