CD73 Promotes Tumor Metastasis by Modulating RICS/Rhoa Signaling
Total Page:16
File Type:pdf, Size:1020Kb

Load more
Recommended publications
-
The Role of LIM Kinase 1 and Its Substrates in Cell Cycle Progression
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2014 The Role of LIM Kinase 1 and its Substrates in Cell Cycle Progression Lisa Ritchey University of Central Florida Part of the Medical Sciences Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Doctoral Dissertation (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation Ritchey, Lisa, "The Role of LIM Kinase 1 and its Substrates in Cell Cycle Progression" (2014). Electronic Theses and Dissertations, 2004-2019. 1300. https://stars.library.ucf.edu/etd/1300 THE ROLE OF LIM KINASE 1 AND ITS SUBSTRATES IN CELL CYCLE PROGRESSION by LISA RITCHEY B.S. Florida State University 2007 M.S. University of Central Florida 2010 A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Burnett School of Biomedical Sciences in the College of Graduate Studies at the University of Central Florida Orlando, Florida Summer Term 2014 Major Professor: Ratna Chakrabarti © 2014 Lisa Ritchey ii ABSTRACT LIM Kinase 1 (LIMK1), a modulator of actin and microtubule dynamics, has been shown to be involved in cell cycle progression. In this study we examine the role of LIMK1 in G1 phase and mitosis. We found ectopic expression of LIMK1 resulted in altered expression of p27Kip1, the G1 phase Cyclin D1/Cdk4 inhibitor. -
Gene Symbol Gene Description ACVR1B Activin a Receptor, Type IB
Table S1. Kinase clones included in human kinase cDNA library for yeast two-hybrid screening Gene Symbol Gene Description ACVR1B activin A receptor, type IB ADCK2 aarF domain containing kinase 2 ADCK4 aarF domain containing kinase 4 AGK multiple substrate lipid kinase;MULK AK1 adenylate kinase 1 AK3 adenylate kinase 3 like 1 AK3L1 adenylate kinase 3 ALDH18A1 aldehyde dehydrogenase 18 family, member A1;ALDH18A1 ALK anaplastic lymphoma kinase (Ki-1) ALPK1 alpha-kinase 1 ALPK2 alpha-kinase 2 AMHR2 anti-Mullerian hormone receptor, type II ARAF v-raf murine sarcoma 3611 viral oncogene homolog 1 ARSG arylsulfatase G;ARSG AURKB aurora kinase B AURKC aurora kinase C BCKDK branched chain alpha-ketoacid dehydrogenase kinase BMPR1A bone morphogenetic protein receptor, type IA BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) BRAF v-raf murine sarcoma viral oncogene homolog B1 BRD3 bromodomain containing 3 BRD4 bromodomain containing 4 BTK Bruton agammaglobulinemia tyrosine kinase BUB1 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) BUB1B BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast) C9orf98 chromosome 9 open reading frame 98;C9orf98 CABC1 chaperone, ABC1 activity of bc1 complex like (S. pombe) CALM1 calmodulin 1 (phosphorylase kinase, delta) CALM2 calmodulin 2 (phosphorylase kinase, delta) CALM3 calmodulin 3 (phosphorylase kinase, delta) CAMK1 calcium/calmodulin-dependent protein kinase I CAMK2A calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha CAMK2B calcium/calmodulin-dependent -
Deep Learning–Based Multi-Omics Integration Robustly Predicts Survival in Liver Cancer Kumardeep Chaudhary1, Olivier B
Published OnlineFirst October 5, 2017; DOI: 10.1158/1078-0432.CCR-17-0853 Statistics in CCR Clinical Cancer Research Deep Learning–Based Multi-Omics Integration Robustly Predicts Survival in Liver Cancer Kumardeep Chaudhary1, Olivier B. Poirion1, Liangqun Lu1,2, and Lana X. Garmire1,2 Abstract Identifying robust survival subgroups of hepatocellular car- index (C-index) ¼ 0.68]. More aggressive subtype is associated cinoma (HCC) will significantly improve patient care. Current- with frequent TP53 inactivation mutations, higher expression ly, endeavor of integrating multi-omicsdatatoexplicitlypredict of stemness markers (KRT19 and EPCAM)andtumormarker HCC survival from multiple patient cohorts is lacking. To fill BIRC5, and activated Wnt and Akt signaling pathways. We this gap, we present a deep learning (DL)–based model on HCC validated this multi-omics model on five external datasets of that robustly differentiates survival subpopulations of patients various omics types: LIRI-JP cohort (n ¼ 230, C-index ¼ 0.75), in six cohorts. We built the DL-based, survival-sensitive model NCI cohort (n ¼ 221, C-index ¼ 0.67), Chinese cohort (n ¼ on 360 HCC patients' data using RNA sequencing (RNA-Seq), 166, C-index ¼ 0.69), E-TABM-36 cohort (n ¼ 40, C-index ¼ miRNA sequencing (miRNA-Seq), and methylation data from 0.77), and Hawaiian cohort (n ¼ 27, C-index ¼ 0.82). This TheCancerGenomeAtlas(TCGA),whichpredictsprognosis is the first study to employ DL to identify multi-omics features as good as an alternative model where genomics and clinical linked to the differential survival of patients with HCC. Given data are both considered. This DL-based model provides two its robustness over multiple cohorts, we expect this workflow to optimal subgroups of patients with significant survival differ- be useful at predicting HCC prognosis prediction. -
Characterization of Gf a Drosophila Trimeric G Protein Alpha Subunit
Characterization of Gf a Drosophila trimeric G protein alpha subunit Naureen Quibria Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Graduate School of Arts and Sciences COLUMBIA UNIVERSITY 2012 © 2012 Naureen Quibria All rights reserved Abstract Characterization of Gf a Drosophila trimeric G-protein alpha subunit Naureen Quibria In the morphogenesis of tissue development, how coordination of patterning and growth achieve the correct organ size and shape is a principal question in biology. Efficient orchestrating mechanisms are required to achieve this and cells have developed sophisticated systems for reception and interpretation of the multitude of extracellular stimuli to which they are exposed. Plasma membrane receptors play a key role in the transmission of such signals. G-protein coupled receptors (GPCRs) are the largest class of cell surface receptors that respond to an enormous diversity of extracellular stimuli, and are critical mediators of cellular signal transduction in eukaryotic organisms. Signaling through GPCRs has been well characterized in many biological contexts. While they are a major class of signal transducers, there are not many defined instances where GPCRs have been implicated in the process of development to date. The Drosophila wing provides an ideal model system to elucidate and address the role of GPCRs in development, as its growth is regulated by a small number of conserved signaling pathways. In my thesis work, I address the role of a trimeric G alpha protein in Drosophila, Gαf, and what part it may play in development. In particular, I explore the role of Gαf as an alpha subunit of a trimeric complex, to determine what heptahelical receptors might act as its cognate receptor. -
PI3K Catalytic Isoform Alteration Promotes the LIMK1-Related
ANTICANCER RESEARCH 37 : 1805-1818 (2017) doi:10.21873/anticanres.11515 PI3K Catalytic Isoform Alteration Promotes the LIMK1-related Metastasis Through the PAK1 or ROCK1/2 Activation in Cigarette Smoke-exposed Ovarian Cancer Cells GA BIN PARK 1 and DAEJIN KIM 2 1Department of Biochemistry, Kosin University College of Medicine, Busan, Republic of Korea; 2Department of Anatomy, Inje University College of Medicine, Busan, Republic of Korea Abstract. Aim: To investigate the molecular mechanisms Several studies have shown a strong correlation between by which long-term exposure to cigarette smoke extract cigarette smoke (CS) and cancer metastasis through the (CSE) contributes to ovarian cancer metastasis. Materials induction of numerous factors involved in migration activity and Methods: Western blot analysis for diverse p110 (1-3). The exposure to CS induces the epithelial- isoforms of phosphoinositide 3-kinase (PI3K)-related mesenchymal transition (EMT) process and up-regulates the signaling pathway and epithelial-mesenchymal transition expression of EMT markers, including N-cadherin and (EMT) markers was performed to analyze the underlying vimentin (4, 5). Cigarette smoke extract (CSE) treatment mechanisms. Migratory activity of CSE-exposed ovarian significantly induces interleukin-8 (IL-8) and transforming cancer cells was determined by transendothelial migration growth factor-beta 1 (TGF- β1 ) production and profoundly and invasion assay. Results: After exposure to CSE for four suppresses the proliferation and growth of erythroid and weeks, CaOV3 (primary) and SKOV3 (metastatic) ovarian granulocyte-macrophage progenitors (6). Stimulation with cancer cells showed enhanced mesenchymal characteristics CSE in human lung fibroblast cells induces the expression and produced EMT-related cytokines [intwerleukin-8 (IL-8), of phosphorylated Smad3, a main downstream target of the vascular endothelial growth factor (VEGF) and TGF- β1 receptor, which results in the secretion of vascular transforming growth factor-beta 1 (TGF- β1 )]. -
Epithelial-To-Mesenchymal Transition Enhances Cancer Cell Sensitivity to Cytotoxic Effects of Cold Atmospheric Plasmas in Breast and Bladder Cancer Systems
cancers Article Epithelial-to-Mesenchymal Transition Enhances Cancer Cell Sensitivity to Cytotoxic Effects of Cold Atmospheric Plasmas in Breast and Bladder Cancer Systems Peiyu Wang 2,3 , Renwu Zhou 4 , Patrick Thomas 2,3,5 , Liqian Zhao 6, Rusen Zhou 4, Susmita Mandal 7, Mohit Kumar Jolly 7, Derek J. Richard 2,3, Bernd H. A. Rehm 8, Kostya (Ken) Ostrikov 9, Xiaofeng Dai 1,*, Elizabeth D. Williams 2,3,4 and Erik W. Thompson 2,3 1 Wuxi School of Medicine, Jiangnan University, Wuxi 214122, China 2 Queensland University of Technology (QUT), School of Biomedical Sciences, Brisbane 4059, Australia 3 Translational Research Institute, Woolloongabba 4102, Australia 4 School of Chemical and Biomolecular Engineering, The University of Sydney, Sydney 2006, Australia 5 Queensland Bladder Cancer Initiative (QBCI), Woolloongabba 4102, Australia 6 The First School of Clinical Medicine, Southern Medical University, Guangzhou 510515, China 7 Centre for BioSystems Science and Engineering, Indian Institute of Science, Bangalore 560012, India 8 Centre for Cell Factories and Biopolymers, Griffith Institute for Drug Discovery, Griffith University, Nathan 4111, Australia 9 School of Chemistry and Physics, Queensland University of Technology, Brisbane 4000, Australia; Citation: Wang, P.; Zhou, R.; * Correspondence: [email protected] Thomas, P.; Zhao, L.; Zhou, R.; Mandal, S.; Jolly, M.K.; Richard, D.J.; Simple Summary: Cold atmospheric plasma (CAP) and plasma-activated medium (PAM) are known Rehm, B.H.A.; Ostrikov, K.; et al. to selectively kill cancer cells, however the efficacy of CAP in cancer cells following epithelial- Epithelial-to-Mesenchymal Transition mesenchymal transition (EMT), a process which endows cancer cells with increased stemness, Enhances Cancer Cell Sensitivity to metastatic potential, and resistance to conventional therapies, has not been previously examined. -
Invasive Bladder Cancer: Genomic Insights and Therapeutic Promise Jaegil Kim1, Rehan Akbani2, Chad J
Review Clinical Cancer Research Invasive Bladder Cancer: Genomic Insights and Therapeutic Promise Jaegil Kim1, Rehan Akbani2, Chad J. Creighton3, Seth P. Lerner3, John N. Weinstein2, Gad Getz1,4, and David J. Kwiatkowski1,5 Abstract Invasive bladder cancer, for which there have been few thera- unusually frequent in comparison with other cancers, and muta- peutic advances in the past 20 years, is a significant medical tion or amplification of transcription factors is also common. problem associated with metastatic disease and frequent mortal- Expression clustering analyses organize bladder cancers into four ity. Although previous studies had identified many genetic altera- principal groups, which can be characterized as luminal, immune tions in invasive bladder cancer, recent genome-wide studies have undifferentiated, luminal immune, and basal. The four groups provided a more comprehensive view. Here, we review those show markedly different expression patterns for urothelial differ- recent findings and suggest therapeutic strategies. Bladder cancer entiation (keratins and uroplakins) and immunity genes (CD274 has a high mutation rate, exceeded only by lung cancer and and CTLA4), among others. These observations suggest numerous melanoma. About 65% of all mutations are due to APOBEC- therapeutic opportunities, including kinase inhibitors and anti- mediated mutagenesis. There is a high frequency of mutations body therapies for genes in the canonical signaling pathways, and/or genomic amplification or deletion events that affect many histone deacetylase inhibitors and novel molecules for chromatin of the canonical signaling pathways involved in cancer develop- gene mutations, and immune therapies, which should be targeted ment: cell cycle, receptor tyrosine kinase, RAS, and PI-3-kinase/ to specific patients based on genomic profiling of their cancers. -
Gene Networks Activated by Specific Patterns of Action Potentials in Dorsal Root Ganglia Neurons Received: 10 August 2016 Philip R
www.nature.com/scientificreports OPEN Gene networks activated by specific patterns of action potentials in dorsal root ganglia neurons Received: 10 August 2016 Philip R. Lee1,*, Jonathan E. Cohen1,*, Dumitru A. Iacobas2,3, Sanda Iacobas2 & Accepted: 23 January 2017 R. Douglas Fields1 Published: 03 March 2017 Gene regulatory networks underlie the long-term changes in cell specification, growth of synaptic connections, and adaptation that occur throughout neonatal and postnatal life. Here we show that the transcriptional response in neurons is exquisitely sensitive to the temporal nature of action potential firing patterns. Neurons were electrically stimulated with the same number of action potentials, but with different inter-burst intervals. We found that these subtle alterations in the timing of action potential firing differentially regulates hundreds of genes, across many functional categories, through the activation or repression of distinct transcriptional networks. Our results demonstrate that the transcriptional response in neurons to environmental stimuli, coded in the pattern of action potential firing, can be very sensitive to the temporal nature of action potential delivery rather than the intensity of stimulation or the total number of action potentials delivered. These data identify temporal kinetics of action potential firing as critical components regulating intracellular signalling pathways and gene expression in neurons to extracellular cues during early development and throughout life. Adaptation in the nervous system in response to external stimuli requires synthesis of new gene products in order to elicit long lasting changes in processes such as development, response to injury, learning, and memory1. Information in the environment is coded in the pattern of action-potential firing, therefore gene transcription must be regulated by the pattern of neuronal firing. -
State-Dependent Calcium Signaling in Dendritic Spines of Striatal Medium Spiny Neurons
Neuron, Vol. 44, 483–493, October 28, 2004, Copyright 2004 by Cell Press State-Dependent Calcium Signaling in Dendritic Spines of Striatal Medium Spiny Neurons Adam G. Carter and Bernardo L. Sabatini* low- and high-threshold voltage-sensitive calcium (Ca) Department of Neurobiology channels (VSCCs), and ionotropic glutamate receptors. Harvard Medical School Multiple neuronal processes in MSNs are regulated by 220 Longwood Avenue Ca influx, including synaptic strength (Calabresi et al., Boston, Massachusetts 02115 1992; Partridge et al., 2000) and gene expression (Kon- radi et al., 1996; Liu and Graybiel, 1996; Rajadhyaksha et al., 1999). MSNs may possess routes for Ca entry not Summary found in other principal neurons, including Ca-perme- able AMPA receptors (AMPARs) (Bernard et al., 1997; Striatal medium spiny neurons (MSNs) in vivo undergo Chen et al., 1998; Stefani et al., 1998). Moreover, Ca large membrane depolarizations known as state tran- sources may be preferentially activated in the two states, sitions. Calcium (Ca) entry into MSNs triggers diverse such as T-type VSCCs capable of activating at relatively downstream cellular processes. However, little is hyperpolarized potentials (McRory et al., 2001). How- known about Ca signals in MSN dendrites and spines ever, little is known about subcellular Ca signals in MSNs and how state transitions influence these signals. and how they are influenced by state transitions. Here, we develop a novel approach, combining 2-pho- In cultured MSNs, upstate transitions are triggered by ton Ca imaging and 2-photon glutamate uncaging, to spontaneous synaptic inputs and can generate dendritic examine how voltage-sensitive Ca channels (VSCCs) Ca signals (Kerr and Plenz, 2002) that are enhanced by and ionotropic glutamate receptors contribute to Ca back-propagating APs (bAPs) (Kerr and Plenz, 2004). -
Functional Analysis of the LIM Kinase 1 and Its Role in Cell Cycle Progression
Functional Analysis of the LIM kinase 1 and its role in Cell Cycle progression Inauguraldissertation zur Erlangung der Würde eines Doktors der Philosophie vorgelegt der Philosophisch-Naturwissenschaftlichen Fakultät der Universität Basel von Ayça Sayı aus Istanbul (Türkei) Zürich 2008 Genehmigt von der Philosophisch- Naturwissenschaftlichen Fakultät auf Antrag von Prof. Dr. Wilhelm Krek, Prof.Dr. Matthias Peter und Prof. Dr. Denis Monard. Basel, den 20. Juni 2006 Prof. Dr. Hans- Jakob Wirz Dekan Abstract LIMK1 (LIM-kinase 1) is a member of the LIMKs family of serine/threonine kinases, comprised of LIMK1, LIMK2 and testicular specific kinases, TESK1 and TESK2. These enzymes catalyze phosphorylation of an actin depolymerizing factor cofilin, thereby inactivate its depolymerizing activity, that leads to actin stabilization as filamentous actin (F-actin). As a consequence, LIMK1 plays a key role in actin cytoskeleton remodeling, notably in response to many extracellular cues that trigger the activation of the small Rho GTPases Rho, Rac and Cdc42, these latter being able to activate LIMK1 through their downstream effectors ROCK, PAK1 and PAK4 respectively. Moreover, on a pathological point of view, dysregulation of LIMK1 has being associated to several diseases: indeed, partial loss of LIMK1 is associated to a neurological disorder called William’s syndrome, whereas LIMK1 upregulation and/or hyperactivation is linked to cancer metastasis. The introduction chapter of this thesis details the current knowledge about LIMK1 and its func- tion in cell migration, cell cycle, neuronal differentiation, and phagocytosis. Additionally, the contribution of LIMK1 dysregulation in pathological circumstances, notably in WilliamÕs syn- drome and in cancer metastasis is discussed. The results chapter summarizes the work undertaken as partial fulfilment of this doctoral study. -
Low-Molecular-Weight Fucoidan Induces Endothelial Cell Migration
Low-Molecular-Weight Fucoidan Induces Endothelial Cell Migration via the PI3K/AKT Pathway and Modulates the Transcription of Genes Involved in Angiogenesis Claire Bouvard, Isabelle Galy-Fauroux, Françoise Grelac, Wassila Carpentier, Anna Lokajczyk, Sophie Gandrille, Sylvia Colliec-Jouault, Anne-Marie Fischer, Dominique Helley To cite this version: Claire Bouvard, Isabelle Galy-Fauroux, Françoise Grelac, Wassila Carpentier, Anna Lokajczyk, et al.. Low-Molecular-Weight Fucoidan Induces Endothelial Cell Migration via the PI3K/AKT Pathway and Modulates the Transcription of Genes Involved in Angiogenesis. Marine drugs, MDPI, 2015, 13 (12), pp.7446 - 7462. 10.3390/md13127075. hal-01514447 HAL Id: hal-01514447 https://hal.archives-ouvertes.fr/hal-01514447 Submitted on 3 May 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License Article Low-Molecular-Weight Fucoidan Induces Endothelial Cell Migration via the PI3K/AKT Pathway and Modulates the Transcription of Genes Involved in Angiogenesis -
571810V1.Full.Pdf
bioRxiv preprint doi: https://doi.org/10.1101/571810; this version posted March 8, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. TITLE PAGE Title: Alternative Titles: β-Catenin tumour-suppressor activity depends on its ability to promote Pro-N-Cadherin maturation Authors: Antonio Herrera, Anghara Menendez, Blanca Torroba and Sebastian Pons* Affiliation: Instituto de Biología Molecular de Barcelona (CSIC), Parc Científic de Barcelona, Baldiri Reixac 10-12, Barcelona 08028, Spain. Tlf: 34-934031103 Present Affiliation for Blanca Torroba: Department of Physiology, Anatomy and Genetics, University of Oxford, Le Gros Clark Building, South Parks Rd, Oxford OX1 3QX (UK). Correspondence author: Sebastian Pons, Instituto de Biología Molecular de Barcelona, (CSIC), Parc Científic de Barcelona, Baldiri Reixac 10-12, Barcelona 08028, Spain. [email protected] Running Title: β-Catenin promotes N-Cadherin maturation Keywords: Pro-N-Cadherin, β-Catenin, Medulloblastoma, Neuroepithelium, Apico-basal polarity, Adherens Junctions. 1 bioRxiv preprint doi: https://doi.org/10.1101/571810; this version posted March 8, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. SUMMARY Neural stem cells (NSCs) form a pseudostratified, single-cell layered epithelium with a marked apico-basal polarity. In these cells, β-Catenin associates with classic cadherins in order to form the apical adherens junctions (AJs). We previously reported that oncogenic forms of β-Catenin (sβ-Catenin) maintain neural precursors as progenitors, while also enhancing their polarization and adhesiveness, thereby limiting their malignant potential.