Insect-Parasitic Nematodes Resembling Plant-Parasitic Forms
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Morphological, Molecular and Phylogenetic Study of Filenchus
Alvani et al., J Plant Pathol Microbiol 2015, S:3 Plant Pathology & Microbiology http://dx.doi.org/10.4172/2157-7471.S3-001 Research Article Open Access Morphological, Molecular and Phylogenetic Study of Filenchus aquilonius as a New Species for Iranian Nematofauna and Some Other Known Nematodes from Iran Based on D2D3 Segments of 28 srRNA Gene Somaye Alvani1, Esmat Mahdikhani Moghaddam1*, Hamid Rouhani1 and Abbas Mohammadi2 1Department of Plant Pathology, Ferdowsi University of Mashhad, Mashhad, Iran 2Department of Plant Pathology, University of Birjand, Birjand, Iran Abstract Ziziphus zizyphus is very important crop in Iran. Because there isn’t any research of plant parasitic nematodes on Z. zizyphus, authors were encouraged to work on it. Nematodes isolated from the soil samples by whitehead method (1965) and permanent slides were prepared. Among the species Filenchus aquilonius is redescribed for the first time from Southern Khorasan province.F. aquilonius is characterized by lip region rounded, not offset, with fine annuls; four incisures in lateral line; Stylet moderately developed, 10-11.8 µm long with rounded knobs; Hemizonid immediately in front of excretory pore; Deirids at the level of excretory pore; Spermatheca an axial chamber and offset pouch; Tail about 120-157 µm, tapering gradually to a pointed terminus. For molecular identification the large subunit expansion segments of D2/D3 were performed for F. aquilonius to examine the phylogenetic relationships with other Tylenchids. DNA sequence data revealed that F. aquilonius had closet phylogenetic affinity withIrantylenchus vicinus as a sister group and with other Filenchus species for this region and placed them in one clade with 100% for bootstap value support. -
An Abstract of the Thesis Of
AN ABSTRACT OF THE THESIS OF Sarah A. Maxfield-Taylor for the degree of Master of Science in Entomology presented on March 26, 2014. Title: Natural Enemies of Native Bumble Bees (Hymenoptera: Apidae) in Western Oregon Abstract approved: _____________________________________________ Sujaya U. Rao Bumble bees (Hymenoptera: Apidae) are important native pollinators in wild and agricultural systems, and are one of the few groups of native bees commercially bred for use in the pollination of a range of crops. In recent years, declines in bumble bees have been reported globally. One factor implicated in these declines, believed to affect bumble bee colonies in the wild and during rearing, is natural enemies. A diversity of fungi, protozoa, nematodes, and parasitoids has been reported to affect bumble bees, to varying extents, in different parts of the world. In contrast to reports of decline elsewhere, bumble bees have been thriving in Oregon on the West Coast of the U.S.A.. In particular, the agriculturally rich Willamette Valley in the western part of the state appears to be fostering several species. Little is known, however, about the natural enemies of bumble bees in this region. The objectives of this thesis were to: (1) identify pathogens and parasites in (a) bumble bees from the wild, and (b) bumble bees reared in captivity and (2) examine the effects of disease on bee hosts. Bumble bee queens and workers were collected from diverse locations in the Willamette Valley, in spring and summer. Bombus mixtus, Bombus nevadensis, and Bombus vosnesenskii collected from the wild were dissected and examined for pathogens and parasites, and these organisms were identified using morphological and molecular characteristics. -
Nematodes As Biocontrol Agents This Page Intentionally Left Blank Nematodes As Biocontrol Agents
Nematodes as Biocontrol Agents This page intentionally left blank Nematodes as Biocontrol Agents Edited by Parwinder S. Grewal Department of Entomology Ohio State University, Wooster, Ohio USA Ralf-Udo Ehlers Department of Biotechnology and Biological Control Institute for Phytopathology Christian-Albrechts-University Kiel, Raisdorf Germany David I. Shapiro-Ilan United States Department of Agriculture Agriculture Research Service Southeastern Fruit and Tree Nut Research Laboratory, Byron, Georgia USA CABI Publishing CABI Publishing is a division of CAB International CABI Publishing CABI Publishing CAB International 875 Massachusetts Avenue Wallingford 7th Floor Oxfordshire OX10 8DE Cambridge, MA 02139 UK USA Tel: þ44 (0)1491 832111 Tel: þ1 617 395 4056 Fax: þ44 (0)1491 833508 Fax: þ1 617 354 6875 E-mail: [email protected] E-mail: [email protected] Web site: www.cabi-publishing.org ßCAB International 2005. All rights reserved. No part of this publication may be reproduced in any form or by any means, electronically, mech- anically, by photocopying, recording or otherwise, without the prior permission of the copyright owners. A catalogue record for this book is available from the British Library, London, UK. Library of Congress Cataloging-in-Publication Data Nematodes as biocontrol agents / edited by Parwinder S. Grewal, Ralf- Udo Ehlers, David I. Shapiro-Ilan. p. cm. Includes bibliographical references and index. ISBN 0-85199-017-7 (alk. paper) 1. Nematoda as biological pest control agents. I. Grewal, Parwinder S. II. Ehlers, Ralf-Udo. III. Shaprio-Ilan, David I. SB976.N46N46 2005 632’.96–dc22 2004030022 ISBN 0 85199 0177 Typeset by SPI Publisher Services, Pondicherry, India Printed and bound in the UK by Biddles Ltd., King’s Lynn This volume is dedicated to Dr Harry K. -
Life-Stage Specific Transcriptomes of a Migratory Endoparasitic Plant
www.nature.com/scientificreports OPEN Life-stage specifc transcriptomes of a migratory endoparasitic plant nematode, Radopholus similis Received: 20 July 2018 Accepted: 2 April 2019 elucidate a diferent parasitic and Published: xx xx xxxx life strategy of plant parasitic nematodes Xin Huang, Chun-Ling Xu, Si-Hua Yang, Jun-Yi Li, Hong-Le Wang, Zi-Xu Zhang, Chun Chen & Hui Xie Radopholus similis is an important migratory endoparasitic nematode, severely harms banana, citrus and many other commercial crops. Little is known about the molecular mechanism of infection and pathogenesis of R. similis. In this study, 64761 unigenes were generated from eggs, juveniles, females and males of R. similis. 11443 unigenes showed signifcant expression diference among these four life stages. Genes involved in host parasitism, anti-host defense and other biological processes were predicted. There were 86 and 102 putative genes coding for cell wall degrading enzymes and antioxidase respectively. The amount and type of putative parasitic-related genes reported in sedentary endoparasitic plant nematodes are variable from those of migratory parasitic nematodes on plant aerial portion. There were no sequences annotated to efectors in R. similis, involved in feeding site formation of sedentary endoparasites nematodes. This transcriptome data provides a new insight into the parasitic and pathogenic molecular mechanisms of the migratory endoparasitic nematodes. It also provides a broad idea for further research on R. similis. Te burrowing nematode, Radopholus similis [(Cobb, 1893) Torne, 1949] is an important migratory endopar- asitic plant nematode that was frst discovered by Cobb in 1891, on the banana roots from Fiji. Previously, it was reported that R. -
Describing Species
DESCRIBING SPECIES Practical Taxonomic Procedure for Biologists Judith E. Winston COLUMBIA UNIVERSITY PRESS NEW YORK Columbia University Press Publishers Since 1893 New York Chichester, West Sussex Copyright © 1999 Columbia University Press All rights reserved Library of Congress Cataloging-in-Publication Data © Winston, Judith E. Describing species : practical taxonomic procedure for biologists / Judith E. Winston, p. cm. Includes bibliographical references and index. ISBN 0-231-06824-7 (alk. paper)—0-231-06825-5 (pbk.: alk. paper) 1. Biology—Classification. 2. Species. I. Title. QH83.W57 1999 570'.1'2—dc21 99-14019 Casebound editions of Columbia University Press books are printed on permanent and durable acid-free paper. Printed in the United States of America c 10 98765432 p 10 98765432 The Far Side by Gary Larson "I'm one of those species they describe as 'awkward on land." Gary Larson cartoon celebrates species description, an important and still unfinished aspect of taxonomy. THE FAR SIDE © 1988 FARWORKS, INC. Used by permission. All rights reserved. Universal Press Syndicate DESCRIBING SPECIES For my daughter, Eliza, who has grown up (andput up) with this book Contents List of Illustrations xiii List of Tables xvii Preface xix Part One: Introduction 1 CHAPTER 1. INTRODUCTION 3 Describing the Living World 3 Why Is Species Description Necessary? 4 How New Species Are Described 8 Scope and Organization of This Book 12 The Pleasures of Systematics 14 Sources CHAPTER 2. BIOLOGICAL NOMENCLATURE 19 Humans as Taxonomists 19 Biological Nomenclature 21 Folk Taxonomy 23 Binomial Nomenclature 25 Development of Codes of Nomenclature 26 The Current Codes of Nomenclature 50 Future of the Codes 36 Sources 39 Part Two: Recognizing Species 41 CHAPTER 3. -
Characterization and Functional Importance of Two Glycoside Hydrolase Family 16 Genes from the Rice White Tip Nematode Aphelenchoides Besseyi
animals Article Characterization and Functional Importance of Two Glycoside Hydrolase Family 16 Genes from the Rice White Tip Nematode Aphelenchoides besseyi Hui Feng , Dongmei Zhou, Paul Daly , Xiaoyu Wang and Lihui Wei * Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, China; [email protected] (H.F.); [email protected] (D.Z.); [email protected] (P.D.); [email protected] (X.W.) * Correspondence: [email protected] Simple Summary: The rice white tip nematode Aphelenchoides besseyi is a plant parasite but can also feed on fungi if this alternative nutrient source is available. Glucans are a major nutrient source found in fungi, and β-linked glucans from fungi can be hydrolyzed by β-glucanases from the glycoside hydrolase family 16 (GH16). The GH16 family is abundant in A. besseyi, but their functions have not been well studied, prompting the analysis of two GH16 members (AbGH16-1 and AbGH16-2). AbGH16-1 and AbGH16-2 are most similar to GH16s from fungi and probably originated from fungi via a horizontal gene transfer event. These two genes are important for feeding on fungi: transcript levels increased when cultured with the fungus Botrytis cinerea, and the purified AbGH16-1 and AbGH16-2 proteins inhibited the growth of B. cinerea. When AbGH16-1 and AbGH16-2 expression A. besseyi was silenced, the reproduction ability of was reduced. These findings have proved for the first time that GH16s contribute to the feeding and reproduction of A. besseyi, which thus provides Citation: Feng, H.; Zhou, D.; Daly, P.; novel insights into how plant-parasitic nematodes can obtain nutrition from sources other than their Wang, X.; Wei, L. -
Forest Health Technology Enterprise Team Biological Control of Invasive
Forest Health Technology Enterprise Team TECHNOLOGY TRANSFER Biological Control Biological Control of Invasive Plants in the Eastern United States Roy Van Driesche Bernd Blossey Mark Hoddle Suzanne Lyon Richard Reardon Forest Health Technology Enterprise Team—Morgantown, West Virginia United States Forest FHTET-2002-04 Department of Service August 2002 Agriculture BIOLOGICAL CONTROL OF INVASIVE PLANTS IN THE EASTERN UNITED STATES BIOLOGICAL CONTROL OF INVASIVE PLANTS IN THE EASTERN UNITED STATES Technical Coordinators Roy Van Driesche and Suzanne Lyon Department of Entomology, University of Massachusets, Amherst, MA Bernd Blossey Department of Natural Resources, Cornell University, Ithaca, NY Mark Hoddle Department of Entomology, University of California, Riverside, CA Richard Reardon Forest Health Technology Enterprise Team, USDA, Forest Service, Morgantown, WV USDA Forest Service Publication FHTET-2002-04 ACKNOWLEDGMENTS We thank the authors of the individual chap- We would also like to thank the U.S. Depart- ters for their expertise in reviewing and summariz- ment of Agriculture–Forest Service, Forest Health ing the literature and providing current information Technology Enterprise Team, Morgantown, West on biological control of the major invasive plants in Virginia, for providing funding for the preparation the Eastern United States. and printing of this publication. G. Keith Douce, David Moorhead, and Charles Additional copies of this publication can be or- Bargeron of the Bugwood Network, University of dered from the Bulletin Distribution Center, Uni- Georgia (Tifton, Ga.), managed and digitized the pho- versity of Massachusetts, Amherst, MA 01003, (413) tographs and illustrations used in this publication and 545-2717; or Mark Hoddle, Department of Entomol- produced the CD-ROM accompanying this book. -
Taxonomy and Identification of Principal Foliar Nematode Species (Aphelenchoides and Litylenchus)
plants Review Taxonomy and Identification of Principal Foliar Nematode Species (Aphelenchoides and Litylenchus) Zafar Handoo *, Mihail Kantor and Lynn Carta Mycology and Nematology Genetic Diversity and Biology Laboratory, USDA, ARS, Northeast Area, Beltsville, MD 20705, USA; [email protected] (M.K.); [email protected] (L.C.) * Correspondence: [email protected] Received: 25 September 2020; Accepted: 2 November 2020; Published: 4 November 2020 Abstract: Nematodes are Earth’s most numerous multicellular animals and include species that feed on bacteria, fungi, plants, insects, and animals. Foliar nematodes are mostly pathogens of ornamental crops in greenhouses, nurseries, forest trees, and field crops. Nematode identification has traditionally relied on morphological and anatomical characters using light microscopy and, in some cases, scanning electron microscopy (SEM). This review focuses on morphometrical and brief molecular details and key characteristics of some of the most widely distributed and economically important foliar nematodes that can aid in their identification. Aphelenchoides genus includes some of the most widely distributed nematodes that can cause crop damages and losses to agricultural, horticultural, and forestry crops. Morphological details of the most common species of Aphelenchoides (A. besseyi, A. bicaudatus, A. fragariae, A. ritzemabosi) are given with brief molecular details, including distribution, identification, conclusion, and future directions, as well as an updated list of the nominal species with its synonyms. Litylenchus is a relatively new genus described in 2011 and includes two species and one subspecies. Species included in the Litylenchus are important emerging foliar pathogens parasitizing trees and bushes, especially beech trees in the United States of America. Brief morphological details of all Litylenchus species are provided. -
JOURNAL of NEMATOLOGY First Record of Aphelenchoides
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2019-070 e2019-70 | Vol. 51 First record of Aphelenchoides stammeri (Nematoda: Aphelenchoididae) from Turkey Mehmet Dayi,1* Ece B. Kasapoğlu Uludamar,2 Süleyman Akbulut3 and Abstract 2 İ. Halil Elekcioğlu In previous surveys for the investigation of Bursaphelenchus 1Forestry Vocational School, xylophilus in Turkey, several Bursaphelenchus species, except Düzce University, Düzce, Turkey. B. xylophilus, were detected. To determine the insect vectors of 2 these previously reported Bursaphelenchus species, trap trees of Department of Plant Protection, each pine species (Pinus brutia and P. nigra) were cut and kept in Faculty of Agriculture, Çukurova the field from April to September in 2011.Aphelenchoides stammeri University, Adana, Turkey. was isolated from wood chip samples of P. nigra from Isparta 3Department of Forest Engineering, (Sütçüler). A. stammeri was first identified by using morphological Faculty of Forestry, İzmir Katip features and allometric criteria of females and males. In addition, Çelebi University, İzmir, Turkey. molecular analysis using sequences of 18S and 28S ribosomal (rRNA) genes of A. stammeri was performed. This is the first report *E-mail: [email protected] of A. stammeri from Turkey. This paper was edited by Eyualem Abebe. Keywords Received for publication April 4, Pinus, Survey, Vector, Aphelenchoides stammeri, Detection, Morphology, 2019. Diagnosis. Pine wilt disease, caused by the pinewood nem- been periodically carried out in different geographical atode, Bursaphelenchus xylophilus (Steiner and regions of Turkey since 2003. Buhrer, 1934; Nickle, 1970) (Nematoda: Parasitaph- In 2011, a new project was started to collect the elenchidae), has been leading to extensive damage possible insect vectors of Bursaphelenchus Fuchs in pine forests of eastern Asia (Webster, 1999). -
Supplemental Description of Paraphelenchus Acontioides
Nematology, 2011, Vol. 13(8), 887-899 Supplemental description of Paraphelenchus acontioides (Tylenchida: Aphelenchidae, Paraphelenchinae), with ribosomal DNA trees and a morphometric compendium of female Paraphelenchus ∗ Lynn K. CARTA 1, , Andrea M. SKANTAR 1, Zafar A. HANDOO 1 and Melissa A. BAYNES 2 1 United States Department of Agriculture, ARS-BARC, Nematology Laboratory, Beltsville, MD 20705, USA 2 Department of Forest Ecology and Biogeosciences, University of Idaho, Moscow, ID 83844, USA Received: 30 September 2010; revised: 7 February 2011 Accepted for publication: 7 February 2011; available online: 5 April 2011 Summary – Nematodes were isolated from surface-sterilised stems of cheatgrass, Bromus tectorum (Poaceae), in Colorado, grown on Fusarium (Hypocreaceae) fungus culture, and identified as Paraphelenchus acontioides. Morphometrics and micrographic morphology of this species are given to supplement the original description and expand the comparative species diagnosis. A tabular morphometric compendium of the females of the 23 species of Paraphelenchus is provided as the last diagnostic compilation was in 1984. Variations in the oviduct within the genus are reviewed to evaluate the taxonomic assignment of P. d e cke r i , a morphologically transitional species between Aphelenchus and Paraphelenchus. Sequences were generated for both 18S and 28S ribosomal DNA, representing the first identified species within Paraphelenchus so characterised. These sequences were incorporated into phylogenetic trees with related species of Aphelenchidae and Tylenchidae. Aphelenchus avenae isolates formed a well supported monophyletic sister group to Paraphelenchus. The ecology of Paraphelenchus, cheat grass and Fusarium is also discussed. Keywords – fungivorous nematode, invasive species, key, morphology, molecular, phylogeny, taxonomy. Nematodes of the genus Paraphelenchus Micoletzky, P. -
Bursaphelenchus Xylophilus
ISPM 27 27 ANNEX 10 ENG DP 10: Bursaphelenchus xylophilus INTERNATIONAL STANDARD FOR PHYTOSANITARY MEASURES PHYTOSANITARY FOR STANDARD INTERNATIONAL DIAGNOSTIC PROTOCOLS Produced by the Secretariat of the International Plant Protection Convention (IPPC) This page is intentionally left blank This diagnostic protocol was adopted by the Standards Committee on behalf of the Commission on Phytosanitary Measures in January 2016. The annex is a prescriptive part of ISPM 27. ISPM 27 Diagnostic protocols for regulated pests DP 10: Bursaphelenchus xylophilus Adopted 2016; published 2016 CONTENTS 1. Pest Information ............................................................................................................................... 2 2. Taxonomic Information .................................................................................................................... 3 3. Detection ........................................................................................................................................... 3 3.1 Detection in trees ............................................................................................................... 4 3.2 Detection by the use of insect traps, trap logs and in samples from sawmills and timber yards ....................................................................................................................... 4 3.3 Direct detection in wood, wood products and solid wood packaging ............................... 5 3.4 Extraction of nematodes from wood samples .................................................................. -
Bumble Bees and Their Parasites Across European Communities: Sphaerularia Bombi in Native and Non-Native Hosts
Bumble bees and their parasites across European communities: Sphaerularia bombi in native and non-native hosts Thesis submitted for the degree of Doctor of Philosophy (PhD) University of London Royal Holloway, University of London Egham Surrey TW20 0EX Catherine Mary Jones September 2013 1 Declaration page I, Catherine Mary Jones, declare that this thesis and the work presented in it is entirely my own. Where I have consulted the work of others, it is always clearly stated. Catherine Mary Jones 2 Acknowledgments First and foremost, I would like to thank my supervisor, Mark Brown, for selecting me as his first PhD student at Royal Holloway, University of London. Without his support and encouragement, the four years of my research would not have been possible. I would also like to thank my advisor, Vincent Jansen, and the technical and administration staff in the School of Biological Sciences, especially Tracey Jeffries, Rob Prouse and Sue Baldwin. I am grateful to the BBSRC for the DTG to fund my research and the YES and Vitae courses that I attended. My thanks also go to Joe Colgan for sharing his knowledge about Irish bumble bees and nematodes, to Roland Loosli, Paul and Regula Schmid-Hempel for helping with my fieldwork in Zurich, to Joe Colgan, Jim Carolan, and Nicola Marples for helping with my fieldwork in Dublin, and to Heather Rumble for looking after my bees in the lab while I was away. I would like to thank all the members of the Brown Lab at Royal Holloway, for their support in the Bee Room and the Ecology Lab, especially Matthias Fürst and Gemma Baron - and for organising so many fabulous social events.