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Illuminating Type Collections of Nectriaceous Fungi in Saccardo's
Persoonia 45, 2020: 221–249 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2020.45.09 Illuminating type collections of nectriaceous fungi in Saccardo’s fungarium N. Forin1, A. Vizzini 2,3,*, S. Nigris1,4, E. Ercole2, S. Voyron2,3, M. Girlanda2,3, B. Baldan1,4,* Key words Abstract Specimens of Nectria spp. and Nectriella rufofusca were obtained from the fungarium of Pier Andrea Saccardo, and investigated via a morphological and molecular approach based on MiSeq technology. ITS1 and ancient DNA ITS2 sequences were successfully obtained from 24 specimens identified as ‘Nectria’ sensu Saccardo (including Ascomycota 20 types) and from the type specimen of Nectriella rufofusca. For Nectria ambigua, N. radians and N. tjibodensis Hypocreales only the ITS1 sequence was recovered. On the basis of morphological and molecular analyses new nomenclatural Illumina combinations for Nectria albofimbriata, N. ambigua, N. ambigua var. pallens, N. granuligera, N. peziza subsp. ribosomal sequences reyesiana, N. radians, N. squamuligera, N. tjibodensis and new synonymies for N. congesta, N. flageoletiana, Sordariomycetes N. phyllostachydis, N. sordescens and N. tjibodensis var. crebrior are proposed. Furthermore, the current classifi- cation is confirmed for Nectria coronata, N. cyanostoma, N. dolichospora, N. illudens, N. leucotricha, N. mantuana, N. raripila and Nectriella rufofusca. This is the first time that these more than 100-yr-old specimens are subjected to molecular analysis, thereby providing important new DNA sequence data authentic for these names. Article info Received: 25 June 2020; Accepted: 21 September 2020; Published: 23 November 2020. INTRODUCTION to orange or brown perithecia which do not change colour in 3 % potassium hydroxide (KOH) or 100 % lactic acid (LA) Nectria, typified with N. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
(Hypocreales) Proposed for Acceptance Or Rejection
IMA FUNGUS · VOLUME 4 · no 1: 41–51 doi:10.5598/imafungus.2013.04.01.05 Genera in Bionectriaceae, Hypocreaceae, and Nectriaceae (Hypocreales) ARTICLE proposed for acceptance or rejection Amy Y. Rossman1, Keith A. Seifert2, Gary J. Samuels3, Andrew M. Minnis4, Hans-Josef Schroers5, Lorenzo Lombard6, Pedro W. Crous6, Kadri Põldmaa7, Paul F. Cannon8, Richard C. Summerbell9, David M. Geiser10, Wen-ying Zhuang11, Yuuri Hirooka12, Cesar Herrera13, Catalina Salgado-Salazar13, and Priscila Chaverri13 1Systematic Mycology & Microbiology Laboratory, USDA-ARS, Beltsville, Maryland 20705, USA; corresponding author e-mail: Amy.Rossman@ ars.usda.gov 2Biodiversity (Mycology), Eastern Cereal and Oilseed Research Centre, Agriculture & Agri-Food Canada, Ottawa, ON K1A 0C6, Canada 3321 Hedgehog Mt. Rd., Deering, NH 03244, USA 4Center for Forest Mycology Research, Northern Research Station, USDA-U.S. Forest Service, One Gifford Pincheot Dr., Madison, WI 53726, USA 5Agricultural Institute of Slovenia, Hacquetova 17, 1000 Ljubljana, Slovenia 6CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands 7Institute of Ecology and Earth Sciences and Natural History Museum, University of Tartu, Vanemuise 46, 51014 Tartu, Estonia 8Jodrell Laboratory, Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK 9Sporometrics, Inc., 219 Dufferin Street, Suite 20C, Toronto, Ontario, Canada M6K 1Y9 10Department of Plant Pathology and Environmental Microbiology, 121 Buckhout Laboratory, The Pennsylvania State University, University Park, PA 16802 USA 11State -
A Higher-Level Phylogenetic Classification of the Fungi
mycological research 111 (2007) 509–547 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres A higher-level phylogenetic classification of the Fungi David S. HIBBETTa,*, Manfred BINDERa, Joseph F. BISCHOFFb, Meredith BLACKWELLc, Paul F. CANNONd, Ove E. ERIKSSONe, Sabine HUHNDORFf, Timothy JAMESg, Paul M. KIRKd, Robert LU¨ CKINGf, H. THORSTEN LUMBSCHf, Franc¸ois LUTZONIg, P. Brandon MATHENYa, David J. MCLAUGHLINh, Martha J. POWELLi, Scott REDHEAD j, Conrad L. SCHOCHk, Joseph W. SPATAFORAk, Joost A. STALPERSl, Rytas VILGALYSg, M. Catherine AIMEm, Andre´ APTROOTn, Robert BAUERo, Dominik BEGEROWp, Gerald L. BENNYq, Lisa A. CASTLEBURYm, Pedro W. CROUSl, Yu-Cheng DAIr, Walter GAMSl, David M. GEISERs, Gareth W. GRIFFITHt,Ce´cile GUEIDANg, David L. HAWKSWORTHu, Geir HESTMARKv, Kentaro HOSAKAw, Richard A. HUMBERx, Kevin D. HYDEy, Joseph E. IRONSIDEt, Urmas KO˜ LJALGz, Cletus P. KURTZMANaa, Karl-Henrik LARSSONab, Robert LICHTWARDTac, Joyce LONGCOREad, Jolanta MIA˛ DLIKOWSKAg, Andrew MILLERae, Jean-Marc MONCALVOaf, Sharon MOZLEY-STANDRIDGEag, Franz OBERWINKLERo, Erast PARMASTOah, Vale´rie REEBg, Jack D. ROGERSai, Claude ROUXaj, Leif RYVARDENak, Jose´ Paulo SAMPAIOal, Arthur SCHU¨ ßLERam, Junta SUGIYAMAan, R. Greg THORNao, Leif TIBELLap, Wendy A. UNTEREINERaq, Christopher WALKERar, Zheng WANGa, Alex WEIRas, Michael WEISSo, Merlin M. WHITEat, Katarina WINKAe, Yi-Jian YAOau, Ning ZHANGav aBiology Department, Clark University, Worcester, MA 01610, USA bNational Library of Medicine, National Center for Biotechnology Information, -
Preliminary Survey of Bionectriaceae and Nectriaceae (Hypocreales, Ascomycetes) from Jigongshan, China
Fungal Diversity Preliminary Survey of Bionectriaceae and Nectriaceae (Hypocreales, Ascomycetes) from Jigongshan, China Ye Nong1, 2 and Wen-Ying Zhuang1* 1Key Laboratory of Systematic Mycology and Lichenology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, P.R. China 2Graduate School of Chinese Academy of Sciences, Beijing 100039, P.R. China Nong, Y. and Zhuang, W.Y. (2005). Preliminary Survey of Bionectriaceae and Nectriaceae (Hypocreales, Ascomycetes) from Jigongshan, China. Fungal Diversity 19: 95-107. Species of the Bionectriaceae and Nectriaceae are reported for the first time from Jigongshan, Henan Province in the central area of China. Among them, three new species, Cosmospora henanensis, Hydropisphaera jigongshanica and Lanatonectria oblongispora, are described. Three species in Albonectria and Cosmospora are reported for the first time from China. Key words: Cosmospora henanensis, Hydropisphaera jigongshanica, Lanatonectria oblongispora, taxonomy. Introduction Studies on the nectriaceous fungi in China began in the 1930’s (Teng, 1934, 1935, 1936). Teng (1963, 1996) summarised work that had been carried out in China up to the middle of the last century. Recently, specimens of the Bionectriaceae and Nectriaceae deposited in the Mycological Herbarium, Institute of Microbiology, Chinese Academy of Sciences (HMAS) were re- examined (Zhuang and Zhang, 2002; Zhang and Zhuang, 2003a) and additional collections from tropical China were identified (Zhuang, 2000; Zhang and Zhuang, 2003b,c), whereas, those from central regions of China were seldom encountered. Field investigations were carried out in November 2003 in Jigongshan (Mt. Jigong), Henan Province. Eighty-nine collections of the Bionectriaceae and Nectriaceae were obtained. Jigongshan is located in the south of Henan (E114°05′, N31°50′). -
Bionectria Pseudochroleuca, a New Host Record on Prunus Sp. in Northern Thailand
Studies in Fungi 5(1): 358–367 (2020) www.studiesinfungi.org ISSN 2465-4973 Article Doi 10.5943/sif/5/1/17 Bionectria pseudochroleuca, a new host record on Prunus sp. in northern Thailand Huanraluek N1, Jayawardena RS1,2, Aluthmuhandiram JVS 1, 2,3, Chethana KWT1,2 and Hyde KD1,2,4* 1Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 2School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand 3Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People’s Republic of China 4Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China Huanraluek N, Jayawardena RS, Aluthmuhandiram JVS, Chethana KWT, Hyde KD 2020 – Bionectria pseudochroleuca, a new host record on Prunus sp. in northern Thailand. Studies in Fungi 5(1), 358–367, Doi 10.5943/sif/5/1/17 Abstract This study presents the first report of Bionectria pseudochroleuca (Bionectriaceae) on Prunus sp. (Rosaceae) from northern Thailand, based on both morphological characteristics and multilocus phylogenetic analyses of internal transcribe spacer (ITS) and Beta-tubulin (TUB2). Key words – Bionectriaceae – Clonostachys – Hypocreales – Nectria – Prunus spp. – Sakura Introduction Bionectriaceae are commonly found in soil, on woody substrates and on other fungi (Rossman et al. 1999, Schroers 2001). Bionectria is a member of Bionectriaceae (Rossman et al. 2013, Maharachchikumbura et al. 2015, 2016) and is distinct from other genera in the family as it has characteristic ascospores and ascus morphology, but none of these are consistently found in all Bionectria species (Schroers 2001). Some species of this genus such as B. -
Molecular Systematics of the Coronophorales and New Species of Bertia, Lasiobertia and Nitschkia
Mycol. Res. 108 (12): 1384–1398 (December 2004). f The British Mycological Society 1384 DOI: 10.1017/S0953756204001273 Printed in the United Kingdom. Molecular systematics of the Coronophorales and new species of Bertia, Lasiobertia and Nitschkia Sabine M. HUHNDORF, Andrew N. MILLER* and Fernando A. FERNA´NDEZ The Field Museum of Natural History, Botany Department, Chicago, Illinois 60605-2496, USA. E-mail : [email protected] Received 16 April 2004; accepted 11 August 2004. The Nitschkiaceae has been placed in the Coronophorales or the Sordariales in recent years. Most recently it was accepted in the Coronophorales and placed in the Hypocreomycetidae based on sequence data from large subunit nrDNA. To confirm and corroborate the taxonomic placement and monophyly of the Coronophorales, additional taxa representing the diversity of the group were targeted for phylogenetic analysis using partial sequences of the large subunit nrDNA (LSU). Based on molecular data, the Coronophorales is found to be monophyletic and its placement in the Hypocreomycetidae is maintained. The order is a coherent group with morphologies that include superficial, often turbinate, often collabent ascomata that may or may not contain a quellkorper and asci that are often stipitate and at times polysporous. Three species with accepted Nitschkia names, together with Fracchiaea broomeiana and Acanthonitschkea argentinensis, comprise the paraphyletic nitschkiaceous complex. Two new families, Chaetosphaerellaceae and Scortechiniaceae fams nov., are described for the clades containing Chaetosphaerella and Crassochaeta and the taxa having a quellkorper (Euacanthe, Neofracchiaea and Scortechinia) respectively. The Bertiaceae is accepted for the clade containing Bertia species. Three new species are described: Bertia tropicalis, Lasiobertia portoricensis, and Nitschkia meniscoidea spp. -
Savoryellales (Hypocreomycetidae, Sordariomycetes): a Novel Lineage
Mycologia, 103(6), 2011, pp. 1351–1371. DOI: 10.3852/11-102 # 2011 by The Mycological Society of America, Lawrence, KS 66044-8897 Savoryellales (Hypocreomycetidae, Sordariomycetes): a novel lineage of aquatic ascomycetes inferred from multiple-gene phylogenies of the genera Ascotaiwania, Ascothailandia, and Savoryella Nattawut Boonyuen1 Canalisporium) formed a new lineage that has Mycology Laboratory (BMYC), Bioresources Technology invaded both marine and freshwater habitats, indi- Unit (BTU), National Center for Genetic Engineering cating that these genera share a common ancestor and Biotechnology (BIOTEC), 113 Thailand Science and are closely related. Because they show no clear Park, Phaholyothin Road, Khlong 1, Khlong Luang, Pathumthani 12120, Thailand, and Department of relationship with any named order we erect a new Plant Pathology, Faculty of Agriculture, Kasetsart order Savoryellales in the subclass Hypocreomyceti- University, 50 Phaholyothin Road, Chatuchak, dae, Sordariomycetes. The genera Savoryella and Bangkok 10900, Thailand Ascothailandia are monophyletic, while the position Charuwan Chuaseeharonnachai of Ascotaiwania is unresolved. All three genera are Satinee Suetrong phylogenetically related and form a distinct clade Veera Sri-indrasutdhi similar to the unclassified group of marine ascomy- Somsak Sivichai cetes comprising the genera Swampomyces, Torpedos- E.B. Gareth Jones pora and Juncigera (TBM clade: Torpedospora/Bertia/ Mycology Laboratory (BMYC), Bioresources Technology Melanospora) in the Hypocreomycetidae incertae -
Molecular Systematics of the Sordariales: the Order and the Family Lasiosphaeriaceae Redefined
Mycologia, 96(2), 2004, pp. 368±387. q 2004 by The Mycological Society of America, Lawrence, KS 66044-8897 Molecular systematics of the Sordariales: the order and the family Lasiosphaeriaceae rede®ned Sabine M. Huhndorf1 other families outside the Sordariales and 22 addi- Botany Department, The Field Museum, 1400 S. Lake tional genera with differing morphologies subse- Shore Drive, Chicago, Illinois 60605-2496 quently are transferred out of the order. Two new Andrew N. Miller orders, Coniochaetales and Chaetosphaeriales, are recognized for the families Coniochaetaceae and Botany Department, The Field Museum, 1400 S. Lake Shore Drive, Chicago, Illinois 60605-2496 Chaetosphaeriaceae respectively. The Boliniaceae is University of Illinois at Chicago, Department of accepted in the Boliniales, and the Nitschkiaceae is Biological Sciences, Chicago, Illinois 60607-7060 accepted in the Coronophorales. Annulatascaceae and Cephalothecaceae are placed in Sordariomyce- Fernando A. FernaÂndez tidae inc. sed., and Batistiaceae is placed in the Euas- Botany Department, The Field Museum, 1400 S. Lake Shore Drive, Chicago, Illinois 60605-2496 comycetes inc. sed. Key words: Annulatascaceae, Batistiaceae, Bolini- aceae, Catabotrydaceae, Cephalothecaceae, Ceratos- Abstract: The Sordariales is a taxonomically diverse tomataceae, Chaetomiaceae, Coniochaetaceae, Hel- group that has contained from seven to 14 families minthosphaeriaceae, LSU nrDNA, Nitschkiaceae, in recent years. The largest family is the Lasiosphaer- Sordariaceae iaceae, which has contained between 33 and 53 gen- era, depending on the chosen classi®cation. To de- termine the af®nities and taxonomic placement of INTRODUCTION the Lasiosphaeriaceae and other families in the Sor- The Sordariales is one of the most taxonomically di- dariales, taxa representing every family in the Sor- verse groups within the Class Sordariomycetes (Phy- dariales and most of the genera in the Lasiosphaeri- lum Ascomycota, Subphylum Pezizomycotina, ®de aceae were targeted for phylogenetic analysis using Eriksson et al 2001). -
Complete Taxonomy for the ATBI Fungi Project Organism Group: Fungi
Complete Taxonomy for the ATBI Fungi Project Organism Group: Fungi DOMAIN, KINGDOM PHYLUM CLASS ORDER FAMILY Eucarya, Fungi Ascomycota Ascomycetes Ascomycetes_order Ascomycetes_family Eucarya, Fungi Ascomycota Ascomycetes Ascomycetes_order Pseudeurotiaceae Eucarya, Fungi Ascomycota Ascomycota_class Ascomycota_order Ascomycota_family Eucarya, Fungi Ascomycota Ascomycota_class Nectriales Clavicipitaceae Eucarya, Fungi Ascomycota Dothideomycetes Dothideales Dothideales_family Eucarya, Fungi Ascomycota Dothideomycetes Dothideomycetes_order Dothideomycetes_family Eucarya, Fungi Ascomycota Dothideomycetes Hysteriales Hysteriaceae Eucarya, Fungi Ascomycota Dothideomycetes Mytilinidiales Mytilinidiaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Dacampiaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Page 1 of 8 Complete Taxonomy for the ATBI Fungi Project Organism Group: Fungi DOMAIN, KINGDOM PHYLUM CLASS ORDER FAMILY Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Lophiostomataceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Massarinaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Melanommataceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleomassariaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleosporales Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Pleosporales_family Eucarya, Fungi Ascomycota Dothideomycetes Pleosporales Sporormiaceae Eucarya, Fungi Ascomycota Dothideomycetes -
Lasionectriopsis, a New Genus in the Bionectriaceae, Based on the New Species L
Lasionectriopsis, a new genus in the Bionectriaceae, based on the new species L. germanica Christian LECHAT Abstract: Lasionectriopsis germanica gen. and sp. nov. is described and illustrated based on a collection from Pierre-Arthur MOREAU germany. The asexual morph of this fungus was obtained in culture and the culture was sequenced. The Hans BENDER genus is placed in the Bionectriaceae based on ascomata not changing colour in 3% KOH or lactic acid, and phylogenetic comparison of LSU sequences with species in 14 genera of the Bionectriaceae. Lasionectriopsis is primarily characterized by whitish to pale orange, globose ascomata, semi-immersed in a subiculum, and Ascomycete.org, 11 (1) : 1–4 verruculose ascospores. Based on molecular data, two species known only as asexual morphs, Acremonium Mise en ligne le 16/02/2019 pteridii and A. spinosum, are recombined in Lasionectriopsis. 10.25664/ART-0250 Keywords: acremonium-like, ascomycota, Hypocreales, ribosomal Dna, taxonomy. Résumé : Lasionectriopsis germanica gen. et sp. nov. est décrit et illustré d’après une récolte effectuée en al- lemagne. La forme asexuée de ce champignon a été obtenue en culture et cette dernière a été séquencée. Le genre est placé dans les Bionectriaceae d’après les ascomes ne changeant pas de couleur dans KOH à 3% ou dans l’acide lactique et la comparaison des séquences LSU avec des espèces représentant 14 genres de Bionectriaceae. Lasionectriopsis est caractérisé par des ascomes globuleux, semi-immergés dans un subicu- lum, blanchâtre à orange pâle et des ascospores verruculeuses. Deux espèces connues jusqu’à présent par leur seul stade asexué, Acremonium pteridii et A. -
Multigene Phylogeny of the Coronophorales: Morphology and New Species in the Order
Mycologia, 102(1), 2010, pp. 185–210. DOI: 10.3852/09-043 # 2010 by The Mycological Society of America, Lawrence, KS 66044-8897 Multigene phylogeny of the Coronophorales: morphology and new species in the order George K. Mugambi1 an important character in defining the Scortechinia- Botany Department, Field Museum of Natural History, ceae, while taxa within the group show a mixture of Chicago, Illinois 60605–2496, Department of morphological characteristics of varying phylogenetic Biological Sciences, University of Illinois at Chicago, importance. The presence of smooth versus spinulose 845 W. Taylor Street (MC 066), Chicago, IL 60607, and National Museums of Kenya, Botany Department, subiculum aids in separating Tympanopsis and P.O. Box 45166, 00100, Nairobi, Kenya Scortechinia, and erumpent ascomata distinguish Cryptosphaerella species. Taxa within the Bertiaceae Sabine M. Huhndorf vary along the lines of robust, tuberculate, collapsing Botany Department, Field Museum of Natural History, Chicago, Illinois 60605–2496 ascomata and large, hyaline to pigmented, septate ascospores. Key words: Ascomycota, Coronophorales, LSU Abstract: The phylogenetic relationships within Cor- rDNA, phylogeny, quellko¨rper, rpb2, tef1 onophorales have been debated because of uncer- tainty over the taxonomic usefulness of characteristics INTRODUCTION such as quellko¨rper, number of ascospores per ascus, presence of ascospore appendages, presence of Members of the Coronophorales are common wood- subiculum and ascomatal vestiture. The phylogenetic inhabiting Ascomycete fungi with a worldwide distri- relationships are examined with DNA sequence data bution. Coronophorales is characterized by taxa with from three nuclear genes targeting 69 taxa and 130 mostly superficial ascomata, sometimes with an new sequences representing collections from Africa extensive hyphal subiculum or well developed basal and the Americas.