Potential Impact and Management of Monilinia Fructicola in an Integrated Peach Orchard
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Peach Brown Rot: Still in Search of an Ideal Management Option
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Repositorio Universidad de Zaragoza agriculture Review Peach Brown Rot: Still in Search of an Ideal Management Option Vitus Ikechukwu Obi 1,2, Juan José Barriuso 2 and Yolanda Gogorcena 1,* ID 1 Experimental Station of Aula Dei-CSIC, Avda de Montañana 1005, 50059 Zaragoza, Spain; [email protected] 2 AgriFood Institute of Aragon (IA2), CITA-Universidad de Zaragoza, 50013 Zaragoza, Spain; [email protected] * Correspondence: [email protected]; Tel.: +34-97-671-6133 Received: 15 June 2018; Accepted: 4 August 2018; Published: 9 August 2018 Abstract: The peach is one of the most important global tree crops within the economically important Rosaceae family. The crop is threatened by numerous pests and diseases, especially fungal pathogens, in the field, in transit, and in the store. More than 50% of the global post-harvest loss has been ascribed to brown rot disease, especially in peach late-ripening varieties. In recent years, the disease has been so manifest in the orchards that some stone fruits were abandoned before harvest. In Spain, particularly, the disease has been associated with well over 60% of fruit loss after harvest. The most common management options available for the control of this disease involve agronomical, chemical, biological, and physical approaches. However, the effects of biochemical fungicides (biological and conventional fungicides), on the environment, human health, and strain fungicide resistance, tend to revise these control strategies. This review aims to comprehensively compile the information currently available on the species of the fungus Monilinia, which causes brown rot in peach, and the available options to control the disease. -
Table of Contents
Table of Contents Table of Contents ............................................................................................................ 1 Authors, Reviewers, Draft Log ........................................................................................ 3 Introduction to Reference ................................................................................................ 5 Introduction to Stone Fruit ............................................................................................. 10 Arthropods ................................................................................................................... 16 Primary Pests of Stone Fruit (Full Pest Datasheet) ....................................................... 16 Adoxophyes orana ................................................................................................. 16 Bactrocera zonata .................................................................................................. 27 Enarmonia formosana ............................................................................................ 39 Epiphyas postvittana .............................................................................................. 47 Grapholita funebrana ............................................................................................. 62 Leucoptera malifoliella ........................................................................................... 72 Lobesia botrana .................................................................................................... -
EU-Spain Cherry RA.Docx
Importation of Cherry [Prunus avium United States (L.) L.] from Continental Spain into Department of Agriculture the Continental United States Animal and Plant Health Inspection Service A Qualitative, Pathway-Initiated Pest March 12, 2015 Risk Assessment Version 3 Agency Contact: Plant Epidemiology and Risk Analysis Laboratory Center for Plant Health Science and Technology Plant Protection and Quarantine Animal and Plant Health Inspection Service United States Department of Agriculture 1730 Varsity Drive, Suite 300 Raleigh, NC 27606 Pest Risk Assessment for Cherries from Continental Spain Executive Summary The Animal and Plant Health Inspection Service (APHIS) of the United States Department of Agriculture (USDA) prepared this risk assessment document to examine plant pest risks associated with importing commercially produced fresh fruit of cherry [Prunus avium (L.) L. (Rosaceae)] for consumption from continental Spain into the continental United States. Based on the scientific literature, port-of-entry pest interception data, and information from the government of Spain, we developed a list of all potential pests with actionable regulatory status for the continental United States that are known to occur in continental Spain and that are known to be associated with the commodity plant species anywhere in the world. From this list, we identified and further analyzed 9 organisms that have a reasonable likelihood of being associated with the commodity following harvesting from the field and prior to any post-harvest processing. Of the pests -
Monilinia Fructicola, Monilinia Laxa and Monilinia Fructigena, the Causal Agents of Brown Rot on Stone Fruits Rita M
De Miccolis Angelini et al. BMC Genomics (2018) 19:436 https://doi.org/10.1186/s12864-018-4817-4 RESEARCH ARTICLE Open Access De novo assembly and comparative transcriptome analysis of Monilinia fructicola, Monilinia laxa and Monilinia fructigena, the causal agents of brown rot on stone fruits Rita M. De Miccolis Angelini* , Domenico Abate, Caterina Rotolo, Donato Gerin, Stefania Pollastro and Francesco Faretra Abstract Background: Brown rots are important fungal diseases of stone and pome fruits. They are caused by several Monilinia species but M. fructicola, M. laxa and M. fructigena are the most common all over the world. Although they have been intensively studied, the availability of genomic and transcriptomic data in public databases is still scant. We sequenced, assembled and annotated the transcriptomes of the three pathogens using mRNA from germinating conidia and actively growing mycelia of two isolates of opposite mating types per each species for comparative transcriptome analyses. Results: Illumina sequencing was used to generate about 70 million of paired-end reads per species, that were de novo assembled in 33,861 contigs for M. fructicola, 31,103 for M. laxa and 28,890 for M. fructigena. Approximately, 50% of the assembled contigs had significant hits when blasted against the NCBI non-redundant protein database and top-hits results were represented by Botrytis cinerea, Sclerotinia sclerotiorum and Sclerotinia borealis proteins. More than 90% of the obtained sequences were complete, the percentage of duplications was always less than 14% and fragmented and missing transcripts less than 5%. Orthologous transcripts were identified by tBLASTn analysis using the B. -
The Brown Rot Fungi of Fruit Crops {Moniliniaspp.), with Special
Thebrow n rot fungi of fruit crops {Monilinia spp.),wit h special reference to Moniliniafructigena (Aderh. &Ruhl. )Hone y Promotor: Dr.M.J .Jege r Hoogleraar Ecologische fytopathologie Co-promotor: Dr.R.P .Baaye n sectiehoofd Mycologie, Plantenziektenkundige DienstWageninge n MM:-: G.C.M. van Leeuwen The brown rot fungi of fruit crops (Monilinia spp.), with special reference to Moniliniafructigena (Aderh. & Ruhl.) Honey Proefschrift terverkrijgin g vand egraa dva n doctor opgeza g vand erecto r magnificus van Wageningen Universiteit, Dr.ir .L .Speelman , inhe topenbaa r te verdedigen opwoensda g 4oktobe r 2000 desnamiddag st e 16.00i nd eAula . V Bibliographic data Van Leeuwen, G.C.M.,200 0 Thebrow nro t fungi of fruit crops (Monilinia spp.),wit h specialreferenc e toMonilinia fructigena (Aderh. &Ruhl. )Hone y PhD ThesisWageninge n University, Wageningen, The Netherlands Withreferences - With summary inEnglis h andDutch . ISBN 90-5808-272-5 Theresearc h was financed byth eCommissio n ofth eEuropea n Communities, Agriculture and Fisheries (FAIR) specific RTD programme, Fair 1 - 0725, 'Development of diagnostic methods and a rapid field kit for monitoring Monilinia rot of stone and pome fruit, especially M.fructicola'. It does not necessarily reflect its views and in no way anticipates the Commission's future policy inthi s area. Financial support wasreceive d from theDutc hPlan t Protection Service (PD)an d Wageningen University, TheNetherlands . BIBLIOTMEFK LANDBOUWUNlVl.-.KSP'Kin WAGEMIN'GEN Stellingen 1.D eJapans e populatieva nMonilia fructigena isolaten verschilt zodanig van dieva n de Europese populatie,morfologisc h zowel als genetisch, datbeide n alsverschillend e soorten beschouwd dienen te worden. -
Monilinia Species of Fruit Decay: a Comparison Between Biological and Epidemiological Data ______Alessandra Di Francesco, Marta Mari
A. Di Francesco, M. Mari Italian Journal of Mycology vol. 47 (2018) ISSN 2531-7342 DOI: https://doi.org/10.6092/issn.2531-7342/7817 Monilinia species of fruit decay: a comparison between biological and epidemiological data ___________________________________________ Alessandra Di Francesco, Marta Mari CRIOF - Department of Agricultural and Food Science, Alma Mater Studiorum University of Bologna Via Gandolfi, 19, 40057 Cadriano, Bologna, Italy Correspondig Author e-mail: [email protected] Abstract The fungal genus Monilinia Honey includes parasitic species of Rosaceae and Ericaceae. The Monilinia genus shows a great heterogeneity, it is divided in two sections: Junctoriae and Disjunctoriae. These sections were defined by Batra (1991) on the basis of morphology, infection biology, and host specialization. Junctoriae spp. produce mitospore chains without disjunctors, they are parasites of Rosaceae spp.; M. laxa, M. fructicola, M. fructigena and recently M. polystroma, represent the principal species of the section, and they are responsible of economically important diseases of Rosaceae, new species such as M. yunnanensis, and M. mumecola could afflict European fruits in the future in absence of a strict phytosanitary control. The Disjunctoriae section includes species that produce mitospores intercalated by appendages (disjunctors); they parasitize Rosaceae, Ericaceae, and Empetraceae. The principal Disjunctoriae species are M. vaccinii-corymbosi, M. urnula, M. baccarum, M. oxycocci, and M. linhartiana. This study has the aim to underline the importance of Monilinia spp., and to describe their features. Keywords: Monilinia spp; Junctoriae; Disjunctoriae; Prunus; Vaccinium Riassunto Il genere Monilinia Honey include diverse specie che attaccano in particolar modo le piante delle famiglie Rosaceae ed Ericaceae. Monilinia è un genere molto eterogeneo, infatti è suddiviso in due sezioni: Junctoriae e Disjunctoriae. -
On the Nature, Symptoms and Genetic Diversity of Monilinia Isolates and Their Viruses in Western Australia
ON THE NATURE, SYMPTOMS AND GENETIC DIVERSITY OF MONILINIA ISOLATES AND THEIR VIRUSES IN WESTERN AUSTRALIA Thesis is presented by Thao Thi Tran For the degree of Doctor of Philosophy at School of Veterinary and Life Sciences Murdoch University, Perth, Western Australia, Australia 2019 DECLARATION I declare that this work is my own account of my research, and it contains as its main content work which has not previously been submitted for a degree at any tertiary education institution. To the best of my knowledge, it contains no material or work performed by others, published or unpublished without reference being made within the text. Date: Thao Thi Tran 1 ABSTRACT Monilinia species occur in stone fruit (Prunus species) production areas in many parts of the world, where they cause the serious disease brown rot. Incursion into Western Australia (W.A.) by Monilinia fructicola was declared in 1997, and along with Monilinia laxa has subsequent spread throughout the state has cost the stone fruit industry millions of dollars in lost production and the cost of fungicidal sprays. Until this study, no studies had been made in W.A. of Monilinia species identity, genetic diversity, distribution, virulence, fungicide tolerance or presence of mycoviruses. This project aimed to address these knowledge gaps. A collection of Monilinia isolates was made across the major stone fruit production regions in W.A., and the fungal species were identified. Both species were present, but they were not evenly distributed between and within production regions, indicating the main agent of spread is people. High levels of genetic diversity have been reported for WA population, and both pathogens are not recently introduced in this state. -
Characterization of M. Laxa and M. Fructigena Isolates from Hungary with MP-PCR
Vol. 39, 2012, No. 3: 116–122 Hort. Sci. (Prague) Characterization of M. laxa and M. fructigena isolates from Hungary with MP-PCR Sz. Sződi, H. Komjáti, Gy. Turóczi Institute for Plant Protection, Faculty of Agricultural and Environmental Sciences, Szent István University, Gödöllő, Hungary Abstract Sződi Sz., Komjáti H., Turóczi Gy., 2012. Characterization of M. laxa and M. fructigena isolates from Hungary with MP-PCR. Hort. Sci. (Prague), 39: 116–122. Monilinia laxa (Monilia laxa), Monilinia fructicola (Monilia fructicola) and Monilinia fructigena (Monilia fructigena) are the causal agents of brown rot on pome and stone fruits in Hungary. Forty-five isolates collected from different hosts, different years in several orchards were used for characterization of the M. laxa and M. fructigena population in Hungary. The isolates were identified on species level based on morphological and molecular biological methods; out of these 24 were M. laxa, 20 were M. fructigena and 1 was M. fructicola. Populations of the three Monilinia species were studied with microsatellite primers and the degree of genetic diversity within the species was measured. The popula- tion structure analysis revealed that genetic diversity within M. laxa subpopulations was HS = 0.1599, while within M. fructigena subpopulations was HS = 0.2551. The total genetic diversity wasH T = 0.3846, while genetic diversity between M. laxa and M. fructigena subpopulations was DST = 0.1771. No clustering relationship was observed among isolates by the different years or hosts. Keywords: brown rot; intraspecific diversity; microsatellite primers Four species of Monilinia: Monilinia laxa (an- M. fructicola is listed as a quarantine pathogen amorph: Monilia laxa), Monilinia fructigena (an- in the European Union (Council Directive 77/93/ amorph: Monilia fructigena), Monilinia fructicola CEE, 1976; 2000/29/EC) and M. -
Deciphering the Monilinia Fructicola Genome to Discover Effector Genes Possibly Involved in Virulence
G C A T T A C G G C A T genes Article Deciphering the Monilinia fructicola Genome to Discover Effector Genes Possibly Involved in Virulence Laura Vilanova 1,2 , Claudio A. Valero-Jiménez 1 and Jan A.L. van Kan 1,* 1 Laboratory of Phytopathology, Wageningen University, 6708 PB Wageningen, The Netherlands; [email protected] (L.V.); [email protected] (C.A.V.-J.) 2 IRTA, Postharvest Programme, Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, Parc de Gardeny, 25003 Lleida, Catalonia, Spain * Correspondence: [email protected] Abstract: Brown rot is the most economically important fungal disease of stone fruits and is primarily caused by Monilinia laxa and Monlinia fructicola. Both species co-occur in European orchards although M. fructicola is considered to cause the most severe yield losses in stone fruit. This study aimed to generate a high-quality genome of M. fructicola and to exploit it to identify genes that may contribute to pathogen virulence. PacBio sequencing technology was used to assemble the genome of M. fructicola. Manual structural curation of gene models, supported by RNA-Seq, and functional annotation of the proteome yielded 10,086 trustworthy gene models. The genome was examined for the presence of genes that encode secreted proteins and more specifically effector proteins. A set of 134 putative effectors was defined. Several effector genes were cloned into Agrobacterium tumefaciens for transient expression in Nicotiana benthamiana plants, and some of them triggered necrotic lesions. Studying effectors and their biological properties will help to better understand the Citation: Vilanova, L.; interaction between M. -
Direct Identification of Monilinia Brown Rot Fungi On
Freimoser et al. Chem. Biol. Technol. Agric. (2016) 3:7 DOI 10.1186/s40538-016-0058-4 RESEARCH Open Access Direct identification of Monilinia brown rot fungi on infected fruits by matrix‑assisted laser desorption/ionization (MALDI) mass spectrometry Florian Matthias Freimoser1* , Maja Hilber‑Bodmer1, René Brunisholz2 and David Drissner3 Abstract Background: Brown rot of stone and pome fruit is a serious fungal disease that is mainly caused by four species in the genus Monilinia. Of these four species, Monilinia fructicola is the most devastating pathogen and of particular concern because it undergoes sexual recombination and has recently been introduced to Europe. So far, Monilinia diagnosis required a multiplex PCR analysis and gel electrophoresis. In contrast, intact-protein biotyping by mass spectrometry is considerably faster and cheaper. However, it usually requires an in vitro cultivation step prior to the MALDI analysis. It was thus attempted to establish a method for the identification of Monilinia species by MALDI bio‑ typing with fungal material derived directly from infected fruits; without an in vitro cultivation step. Results: To simplify and render MALDI biotyping of fungi more reliable, an improved protocol for the preparation of crude protein extracts and for collecting MALDI-TOF MS data for biotyping was developed. We generated reference spectra for all four Monilinia brown rot fungi and were able to reliably identify Monilinia species based on fungal mate‑ rial that was collected directly from infected fruits. This method allowed the correct, fast and economic identification of M. fructicola and M. laxa, while M. fructigena and M. polystroma could not be distinguished reliably. -
Biodiversity Studies of Six Traditional Orchards in England
Natural England Research Report NERR025 Biodiversity studies of six traditional orchards in England www.naturalengland.org.uk Natural England Research Report NERR025 Biodiversity studies of six traditional orchards in England M. Lush1, H. J. Robertson, K. N. A. Alexander, V. Giavarini, E. Hewins1, J. Mellings1, C. R. Stevenson, M. Storey & P.F. Whitehead 1Just Ecology Environmental Consultency Limited Published on 23 April 2009 The views in this report are those of the authors and do not necessarily represent those of Natural England. You may reproduce as many individual copies of this report as you like, provided such copies stipulate that copyright remains with Natural England, 1 East Parade, Sheffield, S1 2ET ISSN 1754-1956 © Copyright Natural England 2009 Project details This report results from research commissioned by English Nature and completed after the successor organisation, Natural England, was set up in October 2006. The work was undertaken under English Nature contract CPAU03/02/189 by the following team: Mike Lush, Eleanor Hewins and Jon Mellings of Just Ecology, Heather Robertson, of Natural England during the project, now retired, and individual consultants Keith Alexander, Vince Giavarini, Robin Stevenson and Malcolm Storey. Results from the report were used from 2005 to 2007 to support the proposal to list traditional orchards as a national priority habitat in the Biodiversity Action Plan. Since 2007, the report has been expanded to incorporate previous work by Paul Whitehead on one study site. The study site results are now being made more widely available, in the form of a permanent record, in this Natural England Research Report. -
A Synoptic Key for Differentiation of Monilinia Fructicola, M. Fructigena
ABlackwell Science, synoptic Ltd key for differentiation of Monilinia fructicola, M. fructigena and M. laxa, based on examination of cultural characters C. R. Lane Central Science Laboratory (Department for Environment, Food & Rural Affairs), Sand Hutton, York YO41 1LZ (UK); e-mail: [email protected] A synoptic key for the identification of three morphologically similar species of Monilinia prin- cipally affecting stone and pome fruit is described. Seven morphological characters were assessed after 10 days incubation under well-defined cultural conditions. No one character was found to separate the species. However, the synoptic key resulted in the correct identification of all isolates tested when compared with a molecular method. colony shape and isolate interactions. However, these features Introduction are affected by incubation conditions and media type, which are Monilinia brown rot is a major fungal disease of stone (Prunus not sufficiently detailed in existing work (Byrde & Willetts, spp.) and pome (Malus and Pyrus spp.) fruit trees causing 1977; Mordue, 1979; EPPO/CABI, 1997) to permit direct com- serious financial losses as a result of blossom and twig blight, parison of the three species, or only compare two out of three formation of cankers and fruit rot (Sinclair et al., 1987). The species (Penrose et al., 1976; Sonoda, 1982). Therefore, in disease is caused by one or more of three closely related practice, accurate diagnosis of Monilinia species is at best fungi – Monilinia fructicola, Monilinia laxa and Monilinia difficult and at worst unreliable. fructigena. Work funded by the EU IVth Framework Programme The distribution of these species differs across the world (Corazza, 1999) endeavoured to solve this problem in part by (Byrde & Willetts, 1977).