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Pharmacogenomics and Nutrigenomics: Synergies and Differences
European Journal of Clinical Nutrition (2007) 61, 567–574 & 2007 Nature Publishing Group All rights reserved 0954-3007/07 $30.00 www.nature.com/ejcn REVIEW Pharmacogenomics and nutrigenomics: synergies and differences D Ghosh, MA Skinner and WA Laing The Horticulture and Food Research Institute of New Zealand Ltd, Auckland, New Zealand The success of the Human Genome Project and the spectacular development of broad genomics tools have catalyzed a new era in both medicine and nutrition. The terms pharmacogenomics and nutrigenomics are relatively new. Both have grown out of their genetic forbears as large-scale genomics technologies have been developed in the last decade. The aim of both disciplines is to individualize or personalize medicine and food and nutrition, and ultimately health, by tailoring the drug or the food to the individual genotype. This review article provides an overview of synergies and differences between these two potentially powerful science areas. Individual genetic variation is the common factor on which both pharmacogenomics and nutrigenomics are based. Each human is genetically (including epigenetics) unique and phenotypically distinct. One of the expectations of both technologies is that a wide range of gene variants and related single-nucleotide polymorphism will be identified as to their importance in health status, validated and incorporated into genotype based strategies for the optimization of health and the prevention of disease. Pharmacogenomics requires rigorous genomic testing that will be regulated and analyzed by professionals and acted on by medical practitioners. As further information is obtained on the importance of the interaction of food and the human genotype in disease prevention and health, pharmacogenomics can provide an opportunity driver for nutrigenomics. -
Factors Determining the Integration of Nutritional Genomics Into Clinical Practice by Registered Dietitians
Trends in Food Science & Technology 59 (2017) 139e147 Contents lists available at ScienceDirect Trends in Food Science & Technology journal homepage: http://www.journals.elsevier.com/trends-in-food-science- and-technology Review Factors determining the integration of nutritional genomics into clinical practice by registered dietitians * Mariette€ Abrahams a, Lynn J. Frewer b, Eleanor Bryant a, Barbara Stewart-Knox a, a Division of Psychology, Faculty of Social Sciences, University of Bradford, UK b School of Agriculture, Food and Rural Development, Newcastle University, UK article info abstract Article history: Background: Personalized nutrition has the potential to improve health, prevent disease and reduce Received 17 October 2015 healthcare expenditure. Whilst research hints at positive consumer attitudes towards personalized Received in revised form nutrition that draws upon lifestyle, phenotypic and genotypic data, little is known about the degree to 2 November 2016 which registered dietitians (RD) are engaged in the delivery of such services. This review sought to Accepted 16 November 2016 determine possible factors associated with the integration of the emerging science of Nutritional Ge- Available online 24 November 2016 nomics (NGx) into the clinical practice setting by practicing registered dietitians. Scope: Search of online databases (Pubmed; National Library of Medicine; Cochrane Library; Ovid Keywords: Dietitians Medline) was conducted on material published from January 2000 to December 2014. Studies that Nutritional genomics sampled practicing dietitians and investigated integration or application of NGx and genetics knowledge Involvement into practice were eligible. Articles were assessed according to the American Dietetic Association Quality Personalized nutrition Criteria Checklist. Key findings: Application of nutritional genomics in practice has been limited. -
Sudan University of Science and Technology College of Graduate
Sudan University of Science and Technology College of Graduate Studies Detection of CDX2 Tumor Marker and Human Papilloma Virus in Esophageal Tumors اﻟﻜﺸﻒ ﻋﻦ اﻟﻮاﺳﻤﺔ اﻟﻮرﻣﯿﺔ CDX2 و ﻓﯿﺮوس اﻟﻮرم اﻟﺤﻠﯿﻤﻲ اﻟﺒﺸﺮي ﻓﻰ اورام اﻟﻤﺮيء A dissertation submitted for partial fulfillment for the requirement for M.Sc degree in Medical laboratory Science (Histopathology and cytology) Submitted by: Eslam Mohamed khoghali Ahmed B.SC (honors) in chemical pathology and histopathology – National Ribat University (2010) Supervised by: Dr. Mohammed Siddig Abdelaziz 2014 ﻗﺎل ﷲ ﺗﻌﺎﻟﻰ ۖ◌ ٰ◌ ﺻدق ﷲ اﻟﻌظﯾم ﺳورة اﻟﺗوﺑﺔ اﻵﯾﺔ 105 Dedication To my father…. My mother…. My brothers…. My friends… Eslam, 2014 Acknowledgement All great thanks are firstly to Allah. I would like to send thanks to my supervisor Dr. Mohamed Siddige Abdalaziz for his guidance and continuous assistance. Thanks are also extend to staff of histopathology and cytology in Ibn-Seina hospital and to members of histopathology and cytology department in Sudan University for science and technology for providing me materials and equipment, finally thanks to every one helped me. Eslam, 2014 Abstract This is a descriptive retrospective study conducted at Ibn Seina hospital and Sudan University of Science and Technology during the period from April 2014 to October 2014. The study aimed at detecting CDX2 and association of Human Papilloma Virus (HPV) in esophageal tumor among Sudanese patients using immune-histochemistry and polymerase chain reaction. Samples from 30 patients previously diagnosed with esophageal tumor (20 with esophageal cancer and 10 with benign). Their ages ranging between 8 to 82 years with mean age 37. From each block two slides were cut one for CDX2 and other for HPV detection, also 10µ was cut from each block in eppendorf tube for detection of HPV type 18 gene using PCR.SPSS version 16 computer program was used to analyze the data. -
Health-Related Effects of Genetic Variations Of
FOCUS ON SPECIAL POPULATIONS HEALTH-RELATED EFFECTS OF GENETIC effects deter people from alcohol consumption and therefore VARIATIONS OF ALCOHOL-METABOLIZING have a protective effect against alcoholism. ENZYMES IN AFRICAN AMERICANS Because alcohol metabolism can significantly influence drinking behavior and the risk for alcoholism (Yin and Agarwal 2001), it is important to understand how genetic Denise M. Scott, Ph.D., and Robert E. Taylor, factors influence metabolism. The different ADH and M.D., Ph.D. ALDH isoforms are encoded by different genes, each of which again may be present in different variations (i.e., Alcohol metabolism involves two key enzymes—alcohol alleles). The occurrence of alternate alleles in a population dehydrogenase (ADH) and aldehyde dehydrogenase is termed polymorphism. The activity and distribution of (ALDH). There are several types of ADH and ALDH, each of the ADH and ALDH alleles and of the proteins they encode which may exist in several variants (i.e., isoforms) that have been intensively studied. For example, researchers differ in their ability to break down alcohol and its toxic have identified differences across ethnic groups in the fre metabolite acetaldehyde. The isoforms are encoded by quencies with which individual genes or gene variants different gene variants (i.e., alleles) whose distribution occur (Osier et al. 2002; Chou et al. 1999). This brief among ethnic groups differs. One variant of ADH is article examines the prevalence and effects of genetic vari ADH1B, which is encoded by several alleles. An allele ants of ADH and ALDH genes in African Americans. called ADH1B*3 is unique to people of African descent and certain Native American tribes. -
Biochemical and Physiological Research on the Disposition and Fate of Ethanol in the Body
Garriott's Medicolegal Aspects of Alcohol, 5th edition, Edited by James Garriott PhD Lawyers & Judges Publishing Co., Tuscon, AZ, 2008 Chapter 3 Biochemical and Physiological Research on the Disposition and Fate of Ethanol in the Body A.W. Jones, Ph.D., D.Sc. Synopsis . Repetitive F Drinking 3.1 Introduction G. Effect of Age on Widmark Parameters 3.2 Fate of Drugs in the Body H. Blood-Alcohol Profiles after Drinking Beer 3.3 Forensic Science Aspects of Alcohol I. Retrograde Extrapolation 3.4 Ethyl Alcohol J. Massive Ingestion of Alcohol under Real-World Conditions A. Chemistry K. Effects of Drugs on Metabolism of Ethanol . B Amounts of Alcohol Consumed L. Elimination Rates Ethanol in Alcoholics During Detoxification C. Alcoholic Beverages M. Ethanol Metabolism in Pathological States . D Analysis of Ethanol in Body Fluids N. Short-Term Fluctuations in Blood-Alcohol Profiles E. Reporting Blood Alcohol Concentration . Intravenous O vs. Oral Route of Ethanol Administration . F Water Content of Biofluids 3.8 Ethanol in Body Fluids and Tissues 3.5 Alcohol in the Body A. Water Content of Specimens A. Endogenous Ethanol . Urine B . B Absorption 1. Diuresis 1. Uptake from the gut 2. Urine-blood ratios 2. Importance of gastric emptying 3. Concentration-time profiles 3. Inhalation of ethanol vapors C. Breath 4. Absorption through skin 1. Breath alcohol physiology 5. Concentration of ethanol in the beverage consumed 2. Blood-breath ratios C. Distribution 3. Concentration-time profiles 1. Arterial-venous differences . Saliva D 2. Plasma/blood and serum/blood ratios 1. Saliva production 3. Volume of distribution 2. -
Associations of Alcohol Consumption and Alcohol Flush Reaction with Leukocyte Telomere Length in Korean Adults
Nutrition Research and Practice 2017;11(4):334-339 ⓒ2017 The Korean Nutrition Society and the Korean Society of Community Nutrition http://e-nrp.org Associations of alcohol consumption and alcohol flush reaction with leukocyte telomere length in Korean adults Hyewon Wang, Hyungjo Kim and Inkyung Baik§ Department of Foods and Nutrition, College of Science and Technology, Kookmin University, 77, Jeongnung-ro, Seongbuk-gu, Seoul 02707, Korea BACKGROUND/OBJECTIVES: Telomere length is a useful biomarker for determining general aging status. Some studies have reported an association between alcohol consumption and telomere length in a general population; however, it is unclear whether the alcohol flush reaction, which is an alcohol-related trait predominantly due to acetaldehyde dehydrogenase deficiency, is associated with telomere length. This cross-sectional study aimed to evaluate the associations of alcohol consumption and alcohol flush reaction with leukocyte telomere length (LTL). SUBJECTS/METHODS: The study included 1,803 Korean adults. Participants provided blood specimens for LTL measurement assay and reported their alcohol drinking status and the presence of an alcohol flush reaction via a questionnaire-based interview. Relative LTL was determined by using a quantitative polymerase chain reaction. Statistical analysis used multiple linear regression models stratified by sex and age groups, and potential confounding factors were considered. RESULTS: Age-specific analyses showed that heavy alcohol consumption (> 30 g/day) was strongly associated with a reduced LTL in participants aged ≥ 65 years (P < 0.001) but not in younger participants. Similarly, the alcohol flush reaction was associated with a reduced LTL only in older participants who consumed > 15 g/day of alcohol (P < 0.01). -
(Nutrigenomics) “NTGE 2422” Level II Human Nutrition Mutayomba Sylvestre
NUTRITIONAL GENOMICS (Nutrigenomics) “NTGE 2422” Level II Human nutrition Mutayomba Sylvestre Nutritional Genomics for Human Nutrition 6/18/2019 1 Level II (CUR) SUBJECT UNIT 1. Genetics variability 2. Nutrition and gene Nutritional Genomics for Human Nutrition 6/18/2019 2 Level II (CUR) GROUP ASSIGNMENTS 1. Preventive medicine and personalized diet 2. Metabolic syndrome 3. Genetics influence on cancer prevention. 4. Environmental influence on cancer prevention. Nutritional Genomics for Human Nutrition 6/18/2019 3 Level II (CUR) INTRODUCTION The link between food and health is a long and a well documented one. With over 24,000 people worldwide dying from hunger each day and obesity reaching epidemic proportions in developed counties, the consequences of too little or too much food are easily seen. People no longer view food as merely a source of calories but rather as a complex mixture of dietary chemicals, some of which are capable of preventing, mitigating, or treating disease. With the sequencing of the human genome, a new genetic dimension has been added to the equation linking the foods we eat to the good health we all hope to enjoy. We bring two things to the dinner table: our appetite and our genotype. Nutritional Genomics for Human Nutrition 6/18/2019 4 Level II (CUR) Genetic diversity makes each of us uniquely different, we are also beginning to understand why we respond to our nutritional environment differently and how these differences can, over time, lead to health or disease. Genomic analysis reveals that humans are 99.9% identical at the DNA level. This implies that the remaining 0.1% of the human genome (or about three million single nucleotide polymorphisms (SNPs)) is responsible for all the morphological, physiological, biochemical and molecular differences between any two individuals. -
Sports Dietitians' Knowledge and Perception of Nutritional Genomics
SPORTS DIETITIANS’ KNOWLEDGE AND PERCEPTION OF NUTRITIONAL GENOMICS AND THE ENHANCEMENT OF ATHLETIC PERFORMANCE A thesis submitted to the Kent State University College of Education, Health, and Human Services In partial fulfillment of the requirements For the degree of Masters of Science By Christopher S. Cooper August 2015 A thesis written by Christopher Samiá Cooper B.S., Howard University, 2004 M.S., Kent State University, 2015 Approved by _________________________, Director, Master’s Thesis Committee Amy Miracle _________________________, Member, Master’s Thesis Committee Karen Lowry Gordon _________________________, Member, Master’s Thesis Committee Natalie Caine-Bish Accepted by _________________________, Director, School of Health Sciences Lynne E. Rowan _________________________, Interim Dean, College of Education, Health and Human Mark Kretovics Services ii COOPER, CHRISTOPHER S., M.S., August 2015 Nutrition SPORTS DIETITIANS’ KNOWLEDGE AND PERCEPTION OF NUTRITIONAL GENOMICS AND THE ENHANCEMENT OF ATHLETIC PERFORMANCE (96 pp.) Director of Thesis: Amy Miracle, Ph.D., R.D., C.S.S.D., L.D. The purpose of this study was to investigate sports dietitians’ knowledge of nutritional genomics and their perceptions of nutritional genomics for enhancing athletic performance. The study was an online voluntary response sampling of Registered Dietitians (n=6219) from the membership database of the Academy of Nutrition and Dietetics (AND). Participants completed a questionnaire composed of 3 sections designed to investigate: (1) Demographics; (2) Knowledge of genetics and diet-gene interactions; (3) Perceptions of nutritional genomics for enhancing athletic performance. For statistical analysis, participant demographic characteristics were used to differentiate between Sports Dietitians (SRDs) and Non-Sports Dietitians (NSRDs). Results of the study indicate that Total Knowledge Scores (TKS) among SRDs were significantly greater than NSRDs; however, there were only six knowledge questions to which >50% of the participants answered correctly. -
Nutrigenomics and Nutritional Epigenetics – the State of the Science in Academia
Nutrigenomics and Nutritional Epigenetics – The State of the Science in Academia THESIS Presented in Partial Fulfillment of the Requirements for the Degree Master of Science in the Graduate School of The Ohio State University By Kimberly Coile Grosh Graduate Program in Human Ecology The Ohio State University 2011 Master's Examination Committee: Lydia Medeiros, Advisor Amanda Bird Copyrighted by Kimberly Coile Grosh 2011 Abstract Nutrigenomics and epigenetics are not yet independent professional degrees in American graduate academia. Further, where in professional science this union between environmental and genetic regulation of health and disease state belongs isn't well characterized. The objectives of this study were to determine which American colleges or universities are training and researching in nutrigenomics and epigenetics, and what might characterize the successful training and research for professional development of such academic fields. We hypothesized that schools with strong supportive academics and funding would be the most likely to train and research in nutrigenomics and epigenetics. To test this hypothesis an internet survey of government-supported databases was conducted to determine which schools were producing the most graduates and receiving the most funding in supportive academics and research. An online questionnaire was then sent to academic and/or research program directors of nutrition, genetics, or related departments to directly measure the presence of, characteristics of, and perspectives on nutrigenomics and epigenetics in academic science. There was a general consensus found for the terminology of nutrigenomics and epigenetics, and for the relevance of nutrigenomics across science disciplines. At least 40% of schools offering doctoral degrees in nutrition and/or genetics have three or more supporting ii academics or funding fields in the 25th percentile for that field, and approximately 22% have both. -
ALDH2(E487K) Mutation Increases Protein Turnover and Promotes Murine Hepatocarcinogenesis
ALDH2(E487K) mutation increases protein turnover and promotes murine hepatocarcinogenesis Shengfang Jina,1, Jiang Chenb,c, Lizao Chend, Gavin Histena, Zhizhong Lind, Stefan Grossa, Jeffrey Hixona, Yue Chena, Charles Kunga, Yiwei Chend, Yufei Fub, Yuxuan Lud, Hui Linc, Xiujun Caic, Hua Yanga, Rob A. Cairnse, Marion Dorscha, Shinsan M. Sua, Scott Billera, Tak W. Make,1, and Yong Cangb,d,1 aAgios Pharmaceuticals, Inc., Cambridge, MA 02139; bLife Sciences Institute and Innovation Center for Cell Signaling Network, Zhejiang University, Hangzhou, Zhejiang 310058, China; cDepartment of General Surgery, Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University, Hangzhou, Zhejiang 310058, China; dOncology Business Unit and Innovation Center for Cell Signaling Network, WuXi AppTec Co., Ltd., Shanghai 200131, China; and eThe Campbell Family Institute for Breast Cancer Research, Ontario Cancer Institute, Princess Margaret Cancer Centre, Toronto, ON, Canada M5G 2C1 Contributed by Tak W. Mak, June 4, 2015 (sent for review March 13, 2015; reviewed by Jorge Moscat) Mitochondrial aldehyde dehydrogenase 2 (ALDH2) in the liver major organ of ethanol detoxification, the relationship between removes toxic aldehydes including acetaldehyde, an intermediate ALDH2*2 and the risk for liver cancer remains unclear (15, 16). of ethanol metabolism. Nearly 40% of East Asians inherit an ALDH2 is highly conserved in humans and mice (17, 18), and inactive ALDH2*2 variant, which has a lysine-for-glutamate sub- several mouse models with modified ALDH2 activities have been stitution at position 487 (E487K), and show a characteristic alcohol developed (19). The closest model to the human ALDH2*2 poly- flush reaction after drinking and a higher risk for gastrointestinal morphism is the Aldh2 knockout (KO) mouse, which expresses no Aldh2 cancers. -
Published Work A.W
Professor A.W. Jones Ph.D., D.Sc. 1 PUBLISHED WORK A.W. Jones, BSc, PhD, DSc. PhD Thesis entitled “Equilibrium Partition Studies of Alcohol in Biological Fluids”, University of Wales, Cardiff, UK, 1974, 230 pp. DSc Thesis; Summary and reprints of 117 articles dealing with “Methods of Analysis, Distribution and Metabolism in the Body and Biological Effects of Alcohol and Narcotics”, University of Wales, Cardiff, UK, 1993. Books and government reports Andréasson R, Jones AW. Alkohol och trafikbrott (Alcohol and traffic crimes), National Board of Forensic Medicine, Stockholm, 1999, pp 1-150. Jones AW, Drugs and driving in Sweden: A compilation of published work. National Board of Forensic Medicine, Division of Forensic Toxicology, Linköping, 2009, pp 1-120. Jones AW, Perspectives in Drug Discovery. National Board of Forensic Medicine, Division of Forensic Toxicology, 2010, pp 1-118. Jones AW, Kugelberg FC, Enstedt C, Lundquist P. Alkoholundersökningar för rättsligt bruk (Alcohol analysis for legal purposes), Swedish National Laboratory of Forensic Science, 2014, pp 1-114. Jones AW. Research work published by the National Laboratory of Forensic Toxicology 1956-2013. National Board of Forensic Medicine, Division of Forensic Toxicology, Linköping, 2014, pp 1-143. 1974 1. Jones TP, Jones AW, Williams PM. Some recent developments in breath alcohol analysis. The Police Surgeon 6;80-86, 1974. 1975 2. Wright BM, Jones TP, Jones AW. Breath-alcohol analysis and the blood/breath ratio. Med Sci Law 15;205-210, 1975. 3. Jones AW, Wright BM, Jones TP. A historical and experimental study of the breath/blood alcohol ratio, In; Proceedings 6th International Conference on Alcohol, Drugs and Traffic Safety, S. -
Diet, Genetics, and Disease: a Focus on the Middle East and North Africa Region
Diet, Genetics, and Disease: A Focus on the Middle East and North Africa Region The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Fahed, Akl C., Abdul-Karim M. El-Hage-Sleiman, Theresa I. Farhat, and Georges M. Nemer. 2012. Diet, genetics, and disease: A focus on the Middle East and North Africa region. Journal of Nutrition and Metabolism 2012:109037. Published Version doi:10.1155/2012/109037 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:10345148 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Hindawi Publishing Corporation Journal of Nutrition and Metabolism Volume 2012, Article ID 109037, 19 pages doi:10.1155/2012/109037 Review Article Diet, Genetics, and Disease: A Focus on the Middle East and North Africa Region Akl C. Fahed,1 Abdul-Karim M. El-Hage-Sleiman,2 Theresa I. Farhat,2 and Georges M. Nemer2 1 Department of Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA 2 Department of Biochemistry and Molecular Genetics, American University of Beirut, Beirut 1107 2020, Lebanon Correspondence should be addressed to Georges M. Nemer, [email protected] Received 31 August 2011; Accepted 27 November 2011 Academic Editor: Hamed R. Takruri Copyright © 2012 Akl C. Fahed et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.