Different Levels of Hsp70 and Hsc70 Mrna Expression in Iberian Fish Exposed to Distinct River Conditions

Total Page:16

File Type:pdf, Size:1020Kb

Different Levels of Hsp70 and Hsc70 Mrna Expression in Iberian Fish Exposed to Distinct River Conditions Genetics and Molecular Biology, 36, 1, 61-69 (2013) Copyright © 2013, Sociedade Brasileira de Genética. Printed in Brazil www.sbg.org.br Research Article Different levels of hsp70 and hsc70 mRNA expression in Iberian fish exposed to distinct river conditions Tiago F. Jesus, Ângela Inácio and Maria M. Coelho Centro de Biologia Ambiental, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisbon, Portugal. Abstract Comprehension of the mechanisms by which ectotherms, such as fish, respond to thermal stress is paramount for understanding the threats that environmental changes may pose to wild populations. Heat shock proteins are molec- ular chaperones with an important role in several stress conditions such as high temperatures. In the Iberian Penin- sula, particularly in Portugal, freshwater fish of the genus Squalius are subject to daily and seasonal temperature variations. To examine the extent to which different thermal regimes influence the expression patterns of hsp70 and hsc70 transcripts we exposed two species of Squalius (S. torgalensis and S. carolitertii) to different temperatures (20, 25, 30 and 35 °C). At 35 °C, there was a significant increase in the expression of hsp70 and hsc70 in the south- ern species, S. torgalensis, while the northern species, S. carolitertii, showed no increase in the expression of these genes; however, some individuals of the latter species died when exposed to 35 °C. These results suggest that S. torgalensis may cope better with harsher temperatures that are characteristic of this species natural environment; S. carolitertii, on the other hand, may be unable to deal with the extreme temperatures faced by the southern species. Keywords: Cyprinidae, heat shock proteins, Squalius, thermal stress. Received: June 18, 2012; Accepted: December 14, 2012. Introduction nism has a significant ecological and evolutionary role in Many organisms are frequently exposed to stressful natural populations (Sørensen et al., 2003; Fangue et al., environmental conditions, such as temperature variations, 2006; Straalen and Roelofs, 2006). In addition to thermal that pose substantial challenges to their survival and repro- stress, other factors such as insecticides, heavy metals, des- duction (López-Maury et al., 2008). Stressful conditions iccation, diseases and parasites can also induce Hsp may limit the geographical distribution of organisms by (Lindquist and Craig, 1988; Sørensen et al., 2003; Fangue causing them to move to more suitable locations et al., 2006). Heat shock proteins are vital for proper cell (Hoffmann and Sgrò, 2011). Organisms can also deal with functioning since they facilitate the folding and refolding of stressful conditions by adapting to them, either through proteins and the degradation of misfolded, aggregated or changes in the genetic composition of populations as a re- denaturated proteins (Lindquist and Craig, 1988; Ohtsuka sult of selection, and/or by phenotypic plasticity; without and Suzuki, 2000; Sørensen et al., 2003; Wegele et al., this adaptability many species would become extinct 2004). (Sørensen et al., 2003; Dahlhoff and Rank, 2007; Berg et Several closely related hsp genes have been identi- al., 2010; Hoffmann and Sgrò, 2011). Most animal species fied and grouped into families based on their evolutionary (> 99%), including fish, are ecthoterms that cannot regulate relationships (Lindquist and Craig, 1988). The exten- their body temperature and this ultimately affects their me- sively studied 70-kDa heat shock protein (Hsp70) belongs tabolism (Berg et al., 2010). Since increases in temperature to a multi-gene family and its gene expression varies un- are one of the major consequences of climate change it is der different physiological conditions (Lindquist and important to know how organisms, particularly ecthoterms, Craig, 1988). The genes that encode the Hsp70 proteins respond to high temperatures. (hsp70s) are considered the major hsp gene family and Heat shock proteins (Hsp) are part of an important consist of exclusively inducible (hsps), exclusively con- mechanism that helps organisms to cope with adverse envi- stitutive [Heat shock cognates (hscs)] and even simulta- ronmental conditions such as thermal stress. This mecha- neously inducible and constitutive genes (Lindquist and Craig, 1988; Ohtsuka and Suzuki, 2000; Place and Hofmann, 2001; Sørensen et al., 2003). The hsp70 genes Send correspondence to T.F. Jesus. Faculdade de Ciências, Edifício C2, Room 2.3.12, Universidade de Lisboa, Campo Grande, and the genes that encode the Hsc70 protein (hsc70)be- 1749-016 Lisbon, Portugal. E-mail: [email protected]. long to the hsp70 gene family. Whereas hsp70 genes are 62 Jesus et al. induced by several types of stress, hsc70 genes are mainly constitutively expressed under normal (non-stress) condi- tions (Lindquist and Craig, 1988; Ohtsuka and Suzuki, 2000; Yamashita et al., 2004). Members of the hsp70 gene family have been widely studied in many organisms and distinct expression patterns have been found. Several studies have reported a relation- ship between the expression patterns of hsp70 and environ- mental variations throughout a species range (Sørensen et al., 2001; Fangue et al., 2006; Karl et al., 2009; Sørensen et al., 2009; Blackman, 2010; Sarup and Loeschcke, 2010). For example, Fangue et al. (2006) detected significant dif- ferences in the gene expression levels of hsp70 between northern and southern populations of Fundulus heteroclitus in North America, with the latter being exposed to higher temperatures. Similarly, Sørensen et al. (2009) found that southern populations of Rana temporaria from Sweden, when exposed to higher temperatures, had the highest lev- Figure 1 - Geographical distribution of S. torgalensis and S. carolitertii in els of Hsp70 protein expression. Portugal, with the respective sampling sites marked with triangles. The hsc70 gene was initially described as being con- stitutively expressed under normal and stressful conditions The main goal of this study was to gain insights into (Lindquist and Craig, 1988; Place and Hofmann, 2001; Yeh the potentially important molecular mechanism involved in and Hsu, 2002; Yamashita et al., 2004). Fangue et al. the response of S. carolitertii and S. torgalensis to thermal (2006) reported that individuals from southern populations stress, particularly since these species inhabit regions with of F. heteroclitus showed enhanced expression of this gene distinct environmental regimes. Specifically, we examined at higher temperatures. This finding demonstrates the im- the hsp70 and hsc70 gene transcription patterns for each portance of studying the expression of hsp70 genes in species exposed to different temperatures and compared the closely related species or populations exposed to different patterns between the two species; we also tried to correlate temperature regimes in their natural habitats. These find- our findings with the ecological context of each species. ings also suggest that Hsps play an important role in ther- Finally, we examined whether the patterns of transcript ex- mal tolerance and that, despite being occasionally parado- pression (for the genes of interest) were similar to those of xical, the expression patterns of these genes must be muscle, which is the most frequently used tissue in such interpreted according to the ecological context of each spe- studies (Yamashita et al., 2004). The results described here cies (Sørensen et al., 2003). provide useful insights into the roles of hsp70 and hsc70 In the Iberian Peninsula, particularly in Portugal, the gene expression in the response of Iberian Squalius to ther- congeneric freshwater fish species, Squalius carolitertii mal stress. (Cyprinidae) (Doadrio, 1988), a species of least concern (Rogado et al., 2006), and Squalius torgalensis (Coelho et Methods al., 1998), a critically endangered species (Cabral et al., 2006), inhabit distinct regions. Squalius carolitertii inhab- Sampling and maintenance of fish its the northern region whereas S. torgalensis is restricted to a small river basin (the Mira river) in the southwestern re- Adult fish (6-8 cm long) of S. carolitertii and S. gion (Figure 1) (Cabral et al., 2006). In these areas, the two torgalensis were collected from Portuguese rivers by elec- species are exposed to different environmental conditions tro-fishing (300 V, 4 A) (Figure 1). The pulses used were of with distinct seasonal and even daily water temperature low duration to avoid killing juveniles. Sampling was done variations. The northern rivers of Portugal have lower tem- during the spring, when the water temperature in the south- peratures and fewer temperature fluctuations than the ern and northern rivers is ~18-22 °C. Fish of both sexes southern rivers (Henriques et al., 2010; SNIRH). In north- were used since there is no sexual dimorphism in either spe- ern rivers, the maximum temperature usually does not ex- cies. Squalius torgalensis individuals were sampled in the ceed 31 °C (range: 3-31 °C), whereas southern rivers are Mira river basin since this species is endemic to this region characterized by an intermittent regime of floods and and individuals of S. carolitertii were collected in the Mon- droughts in which, during the dry season, freshwater fish dego, Vouga and Douro river basins of the northern region. are trapped in small pools in which temperatures can reach The fish were maintained in ~30 L aquaria at 20 °C (mean 38 °C (range: 4-38 °C) (Magalhães et al., 2003; Henriques temperature observed during
Recommended publications
  • Adaptation and Convergence in Genes of the Circadian System in Iberian Squalius Freshwater Species
    bioRxiv preprint doi: https://doi.org/10.1101/706713; this version posted July 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Adaptation and convergence in genes of the circadian system in Iberian Squalius freshwater species João M Moreno1, Vitor C Sousa1, Tiago F Jesus1 and Maria M Coelho1,* 1cE3c – Centre for Ecology, Evolution and Environmental Changes, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal *Corresponding author: e-mail: [email protected] bioRxiv preprint doi: https://doi.org/10.1101/706713; this version posted July 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. ABSTRACT The circadian clock is a biological timing system that improves the inherent ability of organisms to deal with environmental fluctuations. It is regulated by daily alternations of light but can also be affected by temperature. Fish, as ectothermic, have an increased dependence on the environmental temperature and thus are good models to study the integration of temperature within the circadian system. Here, we studied four species of freshwater fish of Squalius genus, distributed across a latitudinal gradient in Portugal with variable conditions of light and temperature. We identified and characterised the expected sixteen genes belonging to four main gene families (Cryptochromes, Period, CLOCK and BMAL) involved in the circadian system.
    [Show full text]
  • International Standardization of Common Names for Iberian Endemic Freshwater Fishes Pedro M
    Limnetica, 28 (2): 189-202 (2009) Limnetica, 28 (2): x-xx (2008) c Asociacion´ Iberica´ de Limnolog´a, Madrid. Spain. ISSN: 0213-8409 International Standardization of Common Names for Iberian Endemic Freshwater Fishes Pedro M. Leunda1,∗, Benigno Elvira2, Filipe Ribeiro3,6, Rafael Miranda4, Javier Oscoz4,Maria Judite Alves5,6 and Maria Joao˜ Collares-Pereira5 1 GAVRN-Gestion´ Ambiental Viveros y Repoblaciones de Navarra S.A., C/ Padre Adoain 219 Bajo, 31015 Pam- plona/Iruna,˜ Navarra, Espana.˜ 2 Universidad Complutense de Madrid, Facultad de Biolog´a, Departamento de Zoolog´a y Antropolog´a F´sica, 28040 Madrid, Espana.˜ 3 Virginia Institute of Marine Science, School of Marine Science, Department of Fisheries Science, Gloucester Point, 23062 Virginia, USA. 4 Universidad de Navarra, Departamento de Zoolog´a y Ecolog´a, Apdo. Correos 177, 31008 Pamplona/Iruna,˜ Navarra, Espana.˜ 5 Universidade de Lisboa, Faculdade de Ciencias,ˆ Centro de Biologia Ambiental, Campo Grande, 1749-016 Lis- boa, Portugal. 6 Museu Nacional de Historia´ Natural, Universidade de Lisboa, Rua da Escola Politecnica´ 58, 1269-102 Lisboa, Portugal. 2 ∗ Corresponding author: [email protected] 2 Received: 8/10/08 Accepted: 22/5/09 ABSTRACT International Standardization of Common Names for Iberian Endemic Freshwater Fishes Iberian endemic freshwater shes do not have standardized common names in English, which is usually a cause of incon- veniences for authors when publishing for an international audience. With the aim to tackle this problem, an updated list of Iberian endemic freshwater sh species is presented with a reasoned proposition of a standard international designation along with Spanish and/or Portuguese common names adopted in the National Red Data Books.
    [Show full text]
  • Different Levels of Hsp70 and Hsc70 Mrna Expression in Iberian Fish Exposed to Distinct River Conditions
    Genetics and Molecular Biology, 36, 1, 61-69 (2013) Copyright © 2013, Sociedade Brasileira de Genética. Printed in Brazil www.sbg.org.br Research Article Different levels of hsp70 and hsc70 mRNA expression in Iberian fish exposed to distinct river conditions Tiago F. Jesus, Ângela Inácio and Maria M. Coelho Centro de Biologia Ambiental, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisbon, Portugal. Abstract Comprehension of the mechanisms by which ectotherms, such as fish, respond to thermal stress is paramount for understanding the threats that environmental changes may pose to wild populations. Heat shock proteins are molec- ular chaperones with an important role in several stress conditions such as high temperatures. In the Iberian Penin- sula, particularly in Portugal, freshwater fish of the genus Squalius are subject to daily and seasonal temperature variations. To examine the extent to which different thermal regimes influence the expression patterns of hsp70 and hsc70 transcripts we exposed two species of Squalius (S. torgalensis and S. carolitertii) to different temperatures (20, 25, 30 and 35 °C). At 35 °C, there was a significant increase in the expression of hsp70 and hsc70 in the south- ern species, S. torgalensis, while the northern species, S. carolitertii, showed no increase in the expression of these genes; however, some individuals of the latter species died when exposed to 35 °C. These results suggest that S. torgalensis may cope better with harsher temperatures that are characteristic of this species natural environment; S. carolitertii, on the other hand, may be unable to deal with the extreme temperatures faced by the southern species.
    [Show full text]
  • Julie Christine Martins
    Julie Christine Martins COMPARAÇÃO DAS RESPOSTAS TRANSCRIPTÔMICAS DE Schizothorax richardsonii, Neogobius melanostomus e Proterorhinus semilunaris À EXPOSIÇÃO A EXPERIMENTOS QUE SIMULAM OS AUMENTOS DE TEMPERATURA DA ÁGUA Florianópolis 2018 Julie Christine Martins COMPARAÇÃO DAS RESPOSTAS TRANSCRIPTÔMICAS DE Schizothorax richardsonii, Neogobius melanostomuseProterorhinus semilunaris À EXPOSIÇÃO A EXPERIMENTOS QUE SIMULAM OS AUMENTOS DE TEMPERATURA DA ÁGUA Trabalho de Conclusão de Curso apresentado como requisito para o cumprimento da disciplina TCC II (BIO7016) do currículo do Curso de Graduação em Ciências Biológicas da Universidade Federal de Santa Catarina. Orientador: Prof. Dr. Guilherme de Toledo e Silva Florianópolis 2018 AGRADECIMENTOS À Universidade Federal de Santa Catarina, por sua estrutura e por proporcionar uma formação de excelente qualidade no Curso de Ciências Biológicas. Ao Laboratório de Biomarcadores de Contaminação Aquática e Imunoquímica e à Superintendência de Governança Eletrônica e Tecnologia da Informação e Comunicação da UFSC por fornecerem os computadores nos quais realizei as análises deste trabalho. Ao Prof. Dr. Guilherme de Toledo e Silva por tornar possível a realização deste trabalho através de sua orientação e por sua paciência e dedicação para ensinar-me sobre a área de bioinformática desde o ínicio. Aos meus pais por fornecerem-me o privilégio de uma educação de qualidade desde a infância e por todo o suporte que me proporcionaram. À minha namorada, companheira e amiga, Bethina, por ser minha calma nos momentos difíceis, por estar sempre ao meu lado e por nossas discussões sobre educação, que foram cruciais para a minha construção como profissional. À Karin, por nossa linda amizade, por nossos estudos e trabalhos intermináveis ao longo da madrugada.
    [Show full text]
  • Squalius Alburnoides
    UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS Departamento de Biologia Animal Reproductive behaviour and the evolutionary history of the hybridogenetic complex Squalius alburnoides (Pisces, Cyprinidae) CARLA PATRÍCIA CÂNDIDO DE SOUSA SANTOS Doutoramento em Biologia (Biologia Evolutiva) 2007 UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS Departamento de Biologia Animal Reproductive behaviour and the evolutionary history of the hybridogenetic complex Squalius alburnoides (Pisces, Cyprinidae) CARLA PATRÍCIA CÂNDIDO DE SOUSA SANTOS Tese co-orientada por: Professor Doutor Vítor Almada (ISPA) Professora Doutora Maria João Collares-Pereira (FCUL) Doutoramento em Biologia (Biologia Evolutiva) 2007 Os trabalhos de investigação realizados durante esta tese tiveram o apoio financeiro da Fundação para a Ciência e a Tecnologia (Bolsa de Doutoramento SFRH/BD/8320/2002 e Programas Plurianuais U I&D 331/94 e U I&D 329/94). The research conducted in this thesis was funded by the FCT Pluriannual Program U I&D 331/94 and U I&D 329/94 (FEDER participation) and by a PhD grant from FCT (SFRH/BD/8320/2002). Nota prévia Na elaboração da presente dissertação foram integralmente utilizados artigos já publicados em revistas internacionais indexadas, à excepção de apenas um artigo que se encontra submetido para publicação (ver “List of Papers”). Uma vez que os referidos trabalhos foram realizados em colaboração com outros investigadores, e nos termos do Artigo 15º, Capítulo I, do Regulamento de Doutoramento da Universidade de Lisboa publicado no Diário da República – II série Nº 194 de 19-08-1993, a autora esclarece que participou em todas as fases de elaboração dos artigos: planeamento, obtenção e análise de dados, interpretação dos resultados e redacção do manuscrito final.
    [Show full text]
  • Population Genomics Data Supports Introgression Between Western
    bioRxiv preprint doi: https://doi.org/10.1101/585687; this version posted July 20, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Population genomics data supports introgression between western 2 Iberian Squalius freshwater fish species 3 4 Sofia L. Mendes1, Maria M. Coelho1*, Vitor C. Sousa1*& 5 1 cE3c – Centre for Ecology, Evolution and Environmental Changes, 6 Faculdade de Ciências da Universidade de Lisboa, Lisbon, Portugal 7 *These authors contributed equally to this work 8 &corresponding author: [email protected] 9 1 bioRxiv preprint doi: https://doi.org/10.1101/585687; this version posted July 20, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 10 Abstract 11 12 In freshwater fish, processes of population divergence and speciation are 13 often linked to the geomorphology of rivers and lakes that isolate 14 populations. However, current geographical isolation does not necessarily 15 imply total absence of gene flow during the divergence process. Here, we 16 focused on four species of the genus Squalius in Portuguese rivers: S. 17 carolitertii, S. pyrenaicus, S. aradensis and S. torgalensis. Previous studies 18 based on eight nuclear and mitochondrial markers revealed incongruent 19 patterns, with nuclear loci suggesting that S.
    [Show full text]
  • 1 Susceptibility of European Freshwater Fish to Climate Change: Species Profiling Based On
    bioRxiv preprint doi: https://doi.org/10.1101/355875; this version posted June 28, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Susceptibility of European freshwater fish to climate change: species profiling based on 2 life-history and environmental characteristics 3 4 Running head: European freshwater fish and climate change 5 6 Ivan Jarić1,2,3*, Robert J. Lennox4, Gregor Kalinkat2, Gorčin Cvijanović3 and Johannes 7 Radinger2,5 8 9 1 Biology Centre of the Czech Academy of Sciences, Institute of Hydrobiology, Ceske 10 Budejovice, Czech Republic 11 2 Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany 12 3 Institute for Multidisciplinary Research, University of Belgrade, Serbia 13 4 Fish Ecology and Conservation Physiology Laboratory, Department of Biology, Carleton 14 University, Ottawa, Ontario, Canada 15 5 GRECO, Institute of Aquatic Ecology, University of Girona, Spain 16 17 * Corresponding author: Ivan Jarić, Biology Centre of the Czech Academy of Sciences, 18 Institute of Hydrobiology, Na Sádkách 702/7, 370 05 České Budějovice, Czech Republic, E- 19 mail: [email protected], phone: +420 38 777 5855, fax: +420 385 310 24 20 21 Keywords: IUCN; Red List; extinction threat; global warming; climate change. 22 23 1 bioRxiv preprint doi: https://doi.org/10.1101/355875; this version posted June 28, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity.
    [Show full text]
  • Squalius Torgalensis Region: 1 Taxonomic Authority: Coelho, Bogutskaya, Rodrigues & Collares- Pereira, 1998 Synonyms: Common Names
    Squalius torgalensis Region: 1 Taxonomic Authority: Coelho, Bogutskaya, Rodrigues & Collares- Pereira, 1998 Synonyms: Common Names: Order: Cypriniformes Family: Cyprinidae Notes on taxonomy: Recent change of genus to Squalius from Leuciscus. (Zardoya, R. & Doadrio, I. 1999).(Sanjur, O. et al 2003) General Information Biome Terrestrial Freshwater Marine Geographic Range of species: Habitat and Ecology Information: It is restricted to one river basin in southern Portugal, the Mira river No data. basin. Conservation Measures: Threats: None Water extraction, drought and introduction of exotic fish species. Species population information: Not very abundant. Native - Native - Presence Presence Extinct Reintroduced Introduced Vagrant Country Distribution Confirmed Possible PortugalCountry: Upper Level Habitat Preferences Score Lower Level Habitat Preferences Score 5.1 Wetlands (inland) - Permanent Rivers/Streams/Creeks 1 (includes waterfalls) 5.2 Wetlands (inland) - Seasonal/Intermittent/Irregular 1 Rivers/Streams/Creeks Major threats Conservation Measures Code Description of threat Past PresentFuture Code Conservation measures In place Needed 1 Habitat Loss/Degradation (human induced) 1 Policy-based actions 1.3 Extraction 1.2 Legislation 1.3.6 Groundwater extraction 1.2.1 Development 1.4 Infrastructure development 1.2.1.1 International level 1.4.5 Transport - water 1.2.1.2 National level 2 Invasive alien species (directly affecting the 1.2.2 Implementation species) 1.2.2.1 International level 6 Pollution (affecting habitat and/or species) 1.2.2.2
    [Show full text]
  • Phylogeography of the Cyprinid Squalius Aradensis and Implications for Conservation of the Endemic Freshwater Fauna of Southern
    Molecular Ecology (2005) 14, 1939–1954 doi: 10.1111/j.1365-294X.2005.02569.x PhylogeographyBlackwell Publishing, Ltd. of the cyprinid Squalius aradensis and implications for conservation of the endemic freshwater fauna of southern Portugal N. MESQUITA,* B. HÄNFLING,† G. R. CARVALHO† and M. M. COELHO* *Universidade de Lisboa, Faculdade de Ciências, Departamento de Biologia Animal/Centro de Biologia Ambiental, Campo Grande, Bloco C2–3° Piso, 1749–016 Lisboa, Portugal, †Molecular Ecology & Fisheries Genetics Laboratory, Department of Biological Sciences, University of Hull, Hull HU6 7RX, UK Abstract The Iberian cyprinid fauna, characterized by the presence of numerous endemic species, has suffered from significant habitat degradation. The critically endangered Squalius aradensis is restricted to small drainages of southern Portugal, habitats that typically exhibit a char- acteristic Mediterranean-type heterogeneous hydrological system throughout the year, including alternation of flooding events during winter and complete drought in large river sections during summer. To assess the effect of historical and recent processes on genetic diversity in S. aradensis we examined within- and among-population variability in cyto- chrome b and six polymorphic microsatellite loci. Estimates of genetic diversity in time and space through the combined use of traditional Φ-/F-statistics, phylogenetic trees, ordination methods and nested clade analysis indicated significant and congruent structuring among populations. Data suggest that the Arade drainage represent the evolutionary centre of the species, with subsequent allopatric fragmentation across drainages. Factors other than iso- lation by distance strongly affected the within-drainage genetic differentiation observed in these Mediterranean-type drainages, including recent population expansion from a bottle- neck event and restricted gene flow imposed by a long-term barrier (brackish water area).
    [Show full text]
  • Adaptation and Convergence in Circadian-Related Genes in Iberian Freshwater Fish
    bioRxiv preprint doi: https://doi.org/10.1101/706713; this version posted June 2, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 TITLE 2 Adaptation and convergence in circadian-related genes in Iberian freshwater fish 3 4 AUTHORS 5 João M Moreno1, Tiago F Jesus1, Vitor C Sousa1,*,+ and Maria M Coelho1,* 6 AUTHOR AFFILIATIONS 7 1cE3c – Centre for Ecology, Evolution and Environmental Changes, Faculdade de 8 Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal 9 *Shared last authorship. 10 +Corresponding author: Vitor C Sousa, [email protected] 11 1 bioRxiv preprint doi: https://doi.org/10.1101/706713; this version posted June 2, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 12 ABSTRACT 13 Background 14 The circadian clock is a biological timing system that improves the ability of organisms 15 to deal with environmental fluctuations. At the molecular level it consists of a network 16 of transcription-translation feedback loops, involving genes that activate (bmal and 17 clock – positive loop) and repress expression (cryptochrome (cry) and period (per) – 18 negative loop). This is regulated by daily alternations of light but can also be affected 19 by temperature.
    [Show full text]
  • Fish Migration in Mediterranean Rivers: a Case Study of the Fish Pass Assessment in Catalonia (NE Iberian Peninsula)
    Nom/Logotip de la Universitat on s’ha llegit la tesi Fish migration in Mediterranean rivers: a case study of the fish pass assessment in Catalonia (NE Iberian Peninsula) Marc Ordeix Rigo http://hdl.handle.net/10803/396363 ADVERTIMENT. L'accés als continguts d'aquesta tesi doctoral i la seva utilització ha de respectar els drets de la persona autora. Pot ser utilitzada per a consulta o estudi personal, així com en activitats o materials d'investigació i docència en els termes establerts a l'art. 32 del Text Refós de la Llei de Propietat Intel·lectual (RDL 1/1996). Per altres utilitzacions es requereix l'autorització prèvia i expressa de la persona autora. En qualsevol cas, en la utilització dels seus continguts caldrà indicar de forma clara el nom i cognoms de la persona autora i el títol de la tesi doctoral. No s'autoritza la seva reproducció o altres formes d'explotació efectuades amb finalitats de lucre ni la seva comunicació pública des d'un lloc aliè al servei TDX. Tampoc s'autoritza la presentació del seu contingut en una finestra o marc aliè a TDX (framing). Aquesta reserva de drets afecta tant als continguts de la tesi com als seus resums i índexs. ADVERTENCIA. El acceso a los contenidos de esta tesis doctoral y su utilización debe respetar los derechos de la persona autora. Puede ser utilizada para consulta o estudio personal, así como en actividades o materiales de investigación y docencia en los términos establecidos en el art. 32 del Texto Refundido de la Ley de Propiedad Intelectual (RDL 1/1996).
    [Show full text]
  • European Red List of Freshwater Fishes Jörg Freyhof and Emma Brooks Published by the European Commission
    European Red List of Freshwater Fishes Jörg Freyhof and Emma Brooks Published by the European Commission This publication has been prepared by IUCN (International Union for Conservation of Nature). The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of the European Commission or IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of the European Commission or IUCN. Citation: Freyhof, J. and Brooks, E. 2011. European Red List of Freshwater Fishes. Luxembourg: Publications Office of the European Union. Design & Layout by: Tasamim Design - www.tasamim.net Printed by: The Colchester Print Group, United Kingdom Picture credits on cover page: The European Mudminnow (Umbra krameri) is a European endemic found in the Danube and Dniestr basin. Its population has declined by more than 30% in the past 10 years due to river regulation and drainage of wetlands for agriculture which resulted in a reduced number of backwaters. This species is therefore classed as Vulnerable. Photograph © Andreas Hartl. All photographs used in this publication remain the property of the original copyright holder (see individual captions for details). Photographs should not be reproduced or used in other contexts without written permission from the copyright holder. Available from: Publications Office of the European Union, http://bookshop.europa.eu IUCN Publications Services, www.iucn.org/publications A catalogue of IUCN publications is also available.
    [Show full text]