Life Forms in Oligochaeta: a Literature Review
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Phylogenetic Diversity of Bacterial Endosymbionts in the Gutless Marine Oligochete Olaviusloisae (Annelida)
MARINE ECOLOGY PROGRESS SERIES Vol. 178: 271-280.1999 Published March 17 Mar Ecol Prog Ser l Phylogenetic diversity of bacterial endosymbionts in the gutless marine oligochete Olavius loisae (Annelida) Nicole ~ubilier'~*,Rudolf ~mann',Christer Erseus2, Gerard Muyzer l, SueYong park3, Olav Giere4, Colleen M. cavanaugh3 'Molecular Ecology Group, Max Planck Institute of Marine Microbiology, Celsiusstr. 1. D-28359 Bremen, Germany 'Department of Invertebrate Zoology. Swedish Museum of Natural History. S-104 05 Stockholm. Sweden 3~epartmentof Organismic and Evolutionary Biology, Harvard University, The Biological Laboratories, Cambridge, Massachusetts 02138, USA 4Zoologisches Institut und Zoologisches Museum. University of Hamburg, D-20146 Hamburg, Germany ABSTRACT: Endosymbiotic associations with more than 1 bacterial phylotype are rare anlong chemoautotrophic hosts. In gutless marine oligochetes 2 morphotypes of bacterial endosymbionts occur just below the cuticle between extensions of the epidermal cells. Using phylogenetic analysis, in situ hybridization, and denaturing gradient gel electrophoresis based on 16s ribosomal RNA genes, it is shown that in the gutless oligochete Olavius Ioisae, the 2 bacterial morphotypes correspond to 2 species of diverse phylogenetic origin. The larger symbiont belongs to the gamma subclass of the Proteobac- tend and clusters with other previously described chemoautotrophic endosymbionts. The smaller syrnbiont represents a novel phylotype within the alpha subclass of the Proteobacteria. This is distinctly cllfferent from all other chemoautotropl-uc hosts with symbiotic bacteria which belong to either the gamma or epsilon Proteobacteria. In addition, a third bacterial morphotype as well as a third unique phylotype belonging to the spirochetes was discovered in these hosts. Such a phylogenetically diverse assemblage of endosymbiotic bacteria is not known from other marine invertebrates. -
Nabs 2004 Final
CURRENT AND SELECTED BIBLIOGRAPHIES ON BENTHIC BIOLOGY 2004 Published August, 2005 North American Benthological Society 2 FOREWORD “Current and Selected Bibliographies on Benthic Biology” is published annu- ally for the members of the North American Benthological Society, and summarizes titles of articles published during the previous year. Pertinent titles prior to that year are also included if they have not been cited in previous reviews. I wish to thank each of the members of the NABS Literature Review Committee for providing bibliographic information for the 2004 NABS BIBLIOGRAPHY. I would also like to thank Elizabeth Wohlgemuth, INHS Librarian, and library assis- tants Anna FitzSimmons, Jessica Beverly, and Elizabeth Day, for their assistance in putting the 2004 bibliography together. Membership in the North American Benthological Society may be obtained by contacting Ms. Lucinda B. Johnson, Natural Resources Research Institute, Uni- versity of Minnesota, 5013 Miller Trunk Highway, Duluth, MN 55811. Phone: 218/720-4251. email:[email protected]. Dr. Donald W. Webb, Editor NABS Bibliography Illinois Natural History Survey Center for Biodiversity 607 East Peabody Drive Champaign, IL 61820 217/333-6846 e-mail: [email protected] 3 CONTENTS PERIPHYTON: Christine L. Weilhoefer, Environmental Science and Resources, Portland State University, Portland, O97207.................................5 ANNELIDA (Oligochaeta, etc.): Mark J. Wetzel, Center for Biodiversity, Illinois Natural History Survey, 607 East Peabody Drive, Champaign, IL 61820.................................................................................................................6 ANNELIDA (Hirudinea): Donald J. Klemm, Ecosystems Research Branch (MS-642), Ecological Exposure Research Division, National Exposure Re- search Laboratory, Office of Research & Development, U.S. Environmental Protection Agency, 26 W. Martin Luther King Dr., Cincinnati, OH 45268- 0001 and William E. -
Phylogenetic and Functional Characterization of Symbiotic Bacteria in Gutless Marine Worms (Annelida, Oligochaeta)
Phylogenetic and functional characterization of symbiotic bacteria in gutless marine worms (Annelida, Oligochaeta) Dissertation zur Erlangung des Grades eines Doktors der Naturwissenschaften -Dr. rer. nat.- dem Fachbereich Biologie/Chemie der Universität Bremen vorgelegt von Anna Blazejak Oktober 2005 Die vorliegende Arbeit wurde in der Zeit vom März 2002 bis Oktober 2005 am Max-Planck-Institut für Marine Mikrobiologie in Bremen angefertigt. 1. Gutachter: Prof. Dr. Rudolf Amann 2. Gutachter: Prof. Dr. Ulrich Fischer Tag des Promotionskolloquiums: 22. November 2005 Contents Summary ………………………………………………………………………………….… 1 Zusammenfassung ………………………………………………………………………… 2 Part I: Combined Presentation of Results A Introduction .…………………………………………………………………… 4 1 Definition and characteristics of symbiosis ...……………………………………. 4 2 Chemoautotrophic symbioses ..…………………………………………………… 6 2.1 Habitats of chemoautotrophic symbioses .………………………………… 8 2.2 Diversity of hosts harboring chemoautotrophic bacteria ………………… 10 2.2.1 Phylogenetic diversity of chemoautotrophic symbionts …………… 11 3 Symbiotic associations in gutless oligochaetes ………………………………… 13 3.1 Biogeography and phylogeny of the hosts …..……………………………. 13 3.2 The environment …..…………………………………………………………. 14 3.3 Structure of the symbiosis ………..…………………………………………. 16 3.4 Transmission of the symbionts ………..……………………………………. 18 3.5 Molecular characterization of the symbionts …..………………………….. 19 3.6 Function of the symbionts in gutless oligochaetes ..…..…………………. 20 4 Goals of this thesis …….………………………………………………………….. -
Envall Et Al
Molecular Phylogenetics and Evolution 40 (2006) 570–584 www.elsevier.com/locate/ympev Molecular evidence for the non-monophyletic status of Naidinae (Annelida, Clitellata, TubiWcidae) Ida Envall a,b,c,¤, Mari Källersjö c, Christer Erséus d a Department of Zoology, Stockholm University, SE-106 91 Stockholm, Sweden b Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden c Laboratory of Molecular Systematics, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden d Department of Zoology, Göteborg University, Box 463, SE-405 30 Göteborg, Sweden Received 24 October 2005; revised 9 February 2006; accepted 15 March 2006 Available online 8 May 2006 Abstract Naidinae (former Naididae) is a group of small aquatic clitellate annelids, common worldwide. In this study, we evaluated the phylo- genetic status of Naidinae, and examined the phylogenetic relationships within the group. Sequence data from two mitochondrial genes (12S rDNA and 16S rDNA), and one nuclear gene (18S rDNA), were used. Sequences were obtained from 27 naidine species, 24 species from the other tubiWcid subfamilies, and Wve outgroup taxa. New sequences (in all 108) as well as GenBank data were used. The data were analysed by parsimony and Bayesian inference. The tree topologies emanating from the diVerent analyses are congruent to a great extent. Naidinae is not found to be monophyletic. The naidine genus Pristina appears to be a derived group within a clade consisting of several genera (Ainudrilus, Epirodrilus, Monopylephorus, and Rhyacodrilus) from another tubiWcid subfamily, Rhyacodrilinae. These results dem- onstrate the need for a taxonomic revision: either Ainudrilus, Epirodrilus, Monopylephorus, and Rhyacodrilus should be included within Naidinae, or Pristina should be excluded from this subfamily. -
A Test of Monophyly of the Gutless Phallodrilinae (Oligochaeta
A test of monophyly of the gutless Phallodrilinae (Oligochaeta, Tubificidae) and the use of a 573-bp region of the mitochondrial cytochrome oxidase I gene in analysis of annelid phylogeny JOHAN A. A. NYLANDER,CHRISTER ERSEÂ US &MARI KAÈ LLERSJOÈ Accepted 7 Setember 1998 Nylander, J. A. A., ErseÂus, C. & KaÈllersjoÈ , M. (1999) A test of monophyly of the gutless Phallodrilinae (Oligochaeta, Tubificidae) and the use of a 573 bp region of the mitochondrial cytochrome oxidase I sequences in analysis of annelid phylogeny. Ð Zoologica Scripta 28, 305±313. A 573-bp region of the mitochondrial gene cytochrome c oxidase subunit I (COI) of two species of Inanidrilus ErseÂus and four species of Olavius ErseÂus (Phallodrilinae, Tubificidae) is used in a parsimony analysis together with a selection of 35 other annelids (including members of Polychaeta, Pogonophora, Aphanoneura, and the clitellate taxa Tubificidae, Enchytraeidae, Naididae, Lumbriculidae, Haplotaxidae, Lumbricidae, Criodrilidae, Branchiobdellida and Hirudinea), and with two molluscs as outgroups. The data support the monophyly of the Olavius and Inanidrilus group, with a monophyletic Inanidrilus. However, parsimony jackknife analyses show that most of the other groups are unsupported by the data set, thus revealing a large amount of homoplasy in the selected gene region. Practically no information is given of within/between family relationships except for a few, closely related species. This suggests that the analysed COI region is not useful, when used alone, for inferring higher level relationships among the annelids. Johan A. A. Nylander, Department of Systematic Zoology, Evolutionary Biology Center, Uppsala University, NorbyvaÈgen 18D, SE-752 36 Uppsala, Sweden. Christer ErseÂus, Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden. -
Phylogeny of 16S Rrna, Ribulose 1,5-Bisphosphate Carboxylase
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Aug. 2006, p. 5527–5536 Vol. 72, No. 8 0099-2240/06/$08.00ϩ0 doi:10.1128/AEM.02441-05 Copyright © 2006, American Society for Microbiology. All Rights Reserved. Phylogeny of 16S rRNA, Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase, and Adenosine 5Ј-Phosphosulfate Reductase Genes from Gamma- and Alphaproteobacterial Symbionts in Gutless Marine Worms (Oligochaeta) from Bermuda and the Bahamas Anna Blazejak,1 Jan Kuever,1† Christer Erse´us,2 Rudolf Amann,1 and Nicole Dubilier1* Max Planck Institute of Marine Microbiology, Celsiusstrasse 1, D-28359 Bremen, Germany,1 and Department of Zoology, Go¨teborg University, Box 463, SE-405 30 Go¨teborg, Sweden2 Received 16 October 2005/Accepted 17 April 2006 Gutless oligochaetes are small marine worms that live in obligate associations with bacterial endosymbionts. While symbionts from several host species belonging to the genus Olavius have been described, little is known of the symbionts from the host genus Inanidrilus. In this study, the diversity of bacterial endosymbionts in Inanidrilus leukodermatus from Bermuda and Inanidrilus makropetalos from the Bahamas was investigated using comparative sequence analysis of the 16S rRNA gene and fluorescence in situ hybridization. As in all other gutless oligochaetes examined to date, I. leukodermatus and I. makropetalos harbor large, oval bacteria identified as Gamma 1 symbionts. The presence of genes coding for ribulose-1,5-bisphosphate carboxylase/oxygenase form I (cbbL) and adenosine 5-phosphosulfate reductase (aprA) supports earlier studies indicating that these symbionts are chemoautotrophic sulfur oxidizers. Alphaproteobacteria, previously identified only in the gutless oligochaete Olavius loisae from the southwest Pacific Ocean, coexist with the Gamma 1 symbionts in both I. -
(Clitellata: Annelida) Adrian Pinder TRIN Taxonomic Guide 2
Tools for identifying selected Australian aquatic oligochaetes (Clitellata: Annelida) Adrian Pinder TRIN Taxonomic Guide 2. 1 Tools for identifying selected Australian aquatic oligochaetes (Clitellata : Annelida) Adrian Pinder Science Division Department of Environment and Conservation PO Box 51, Wanneroo 6946 Western Australia Taxonomy Research and Information Network (TRIN) TRIN Taxonomic Guide 2. Presented at the Taxonomic Workshop held at La Trobe University, Albury-Wodonga Campus, Wodonga, February 10-11 th 2009. 2 Tools for identifying selected Australian aquatic oligochaetes (Clitellata: Annelida) Adrian Pinder Science Division, Department of Environment and Conservation, P.O. Box 51, Wanneroo, 6946, Western Australia. CONTENTS INTRODUCTION...................................................................................................................3 CLASSIFICATION.................................................................................................................5 EXPLANATION OF CHARACTERS ......................................................................................6 Fixation and preservation ................................................................................. 14 Examination of specimens ............................................................................... 14 Recipe for Grenacher’s borax carmine ........................................................... 15 Examination of the genitalia ............................................................................. 15 KEY TO ANNELID -
Guide to the Freshwater Aquatic Microdrile Oligochaetes of North America
CANADIAN SPECIAL PUBLICATION OF FISHERIES AND AQUATIC SCIENCES 84 DFO Library MPO - Bibliothèque Ill 11 1111 1111 11 11 12038953 Guide to the Freshwater Aquatic Microdrile Oligochaetes of North America R.O. Brinkhurst QL (G210 3i44 Fisheries Pèches 11* and Oceans et Oceans IT 8- q c- 2 Canadian Special Publication of Fisheries and Aquatic Sciences 84 c? c Guide to the Freshwater Aquatic Microdrile Oligochaetes of North America R. O. Brinkhurst Department of Fisheries and Oceans Institute of Ocean Sciences 9860 West Saanich Road Sidney, British Columbia V8L 4B2 Fisheries & Oceans LIBRARY DEC 271985 BI BLIOTHÈQUE & Océans DEPARTMENT OF FISHERIES AND OCEANS Ottawa 1986 Published by Publié par Fisheries Pêches 1+ and Oceans et Océans Scientific Information Direction de l'information and Publications Branch et des publications scientifiques Ottawa KlA 0E6 ©Minister of Supply and Services Canada 1986 Available from authorized bookstore agents, other bookstores or you may send your prepaid order to the Canadian Government Publishing Centre Supply and Services Canada, Ottawa, Ont. K 1 A 0S9. Make cheques or money orders payable in Canadian funds to the Receiver General for Canada. A deposit copy of this publication is also available for reference in public libraries across Canada. Canada: $14.95 Cat. No. Fs 41-31/84E Other Countries: $17.95 ISBN 0-660-11924-2 ISSN 0706-6481 Price subject to change without notice Directoe, and Editor—in—Chief: J. Watson, Ph . D. Assistant Editor: D. G. Cook, Ph .D. Publication Production Coordinator: G. J. Neville Printer: '13iierianan Printers , Winnipeg, Manitoba Cover Design: André, Gordon and Laundreth Inc. -
Phylogeny of 16S Rrna, Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase, and Adenosine 5Ј-Phosphosulfate Reductase Genes from Gamma
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Aug. 2006, p. 5527–5536 Vol. 72, No. 8 0099-2240/06/$08.00ϩ0 doi:10.1128/AEM.02441-05 Copyright © 2006, American Society for Microbiology. All Rights Reserved. Phylogeny of 16S rRNA, Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase, and Adenosine 5Ј-Phosphosulfate Reductase Genes from Gamma- and Alphaproteobacterial Symbionts in Gutless Marine Worms Downloaded from (Oligochaeta) from Bermuda and the Bahamas Anna Blazejak,1 Jan Kuever,1† Christer Erse´us,2 Rudolf Amann,1 and Nicole Dubilier1* Max Planck Institute of Marine Microbiology, Celsiusstrasse 1, D-28359 Bremen, Germany,1 and Department of Zoology, Go¨teborg University, Box 463, SE-405 30 Go¨teborg, Sweden2 Received 16 October 2005/Accepted 17 April 2006 Gutless oligochaetes are small marine worms that live in obligate associations with bacterial endosymbionts. http://aem.asm.org/ While symbionts from several host species belonging to the genus Olavius have been described, little is known of the symbionts from the host genus Inanidrilus. In this study, the diversity of bacterial endosymbionts in Inanidrilus leukodermatus from Bermuda and Inanidrilus makropetalos from the Bahamas was investigated using comparative sequence analysis of the 16S rRNA gene and fluorescence in situ hybridization. As in all other gutless oligochaetes examined to date, I. leukodermatus and I. makropetalos harbor large, oval bacteria identified as Gamma 1 symbionts. The presence of genes coding for ribulose-1,5-bisphosphate carboxylase/oxygenase form I (cbbL) and adenosine 5-phosphosulfate reductase (aprA) supports earlier studies indicating that these symbionts are chemoautotrophic sulfur oxidizers. Alphaproteobacteria, previously identified only in the gutless oligochaete Olavius loisae from the southwest Pacific Ocean, coexist with the Gamma 1 symbionts in both I. -
(Oligochaeta, Annelida) by Phylogenetic 16S Rrna Sequence Analysis and in Situ Hybridization
Characterization of chemoautotrophic bacterial symbionts in a gutless marine worm (Oligochaeta, Annelida) by phylogenetic 16S rRNA sequence analysis and in situ hybridization The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Dubilier, N., O. Giere, D. L. Distel, and Colleen M. Cavanaugh. 1995. "Characterization of chemoautotrophic bacterial symbionts in a gutless marine worm (Oligochaeta, Annelida) by phylogenetic 16S rRNA sequence analysis and in situ hybridization." Applied and Environmental Microbiology 61, no. 6: 2346-2350. Published Version http://aem.asm.org/content/61/6/2346.full.pdf+html Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:14352858 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA APPLIED AND ENVIRONMENTAL MICROBIOLOGY, June 1995, p. 2346–2350 Vol. 61, No. 6 0099-2240/95/$04.0010 Copyright q 1995, American Society for Microbiology Characterization of Chemoautotrophic Bacterial Symbionts in a Gutless Marine Worm (Oligochaeta, Annelida) by Phylogenetic 16S rRNA Sequence Analysis and In Situ Hybridization 1 2 3 1 NICOLE DUBILIER, † OLAV GIERE, DANIEL L. DISTEL, AND COLLEEN M. CAVANAUGH * Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts 021381; Zoologisches Institut und Zoologisches Museum, Universita¨t Hamburg, 20146 Hamburg, Germany2; and Department of Biochemistry, Microbiology, and Molecular Biology, University of Maine, Orono, Maine 04469-57353 Received 29 December 1994/Accepted 8 April 1995 The phylogenetic relationships of chemoautotrophic endosymbionts in the gutless marine oligochaete Inanid- rilus leukodermatus to chemoautotrophic ecto- and endosymbionts from other host phyla and to free-living bacteria were determined by comparative 16S rRNA sequence analysis. -
Annelida, Clitellata, Oligochaeta
This is a reproduction of a library book that was digitized by Google as part of an ongoing effort to preserve the information in books and make it universally accessible. https://books.google.com United St-tes --iro---l Monitoring and ---rt onA----8--. Environmental Protection Laboratory June 1980 Agency Cincinnati OH 45268 Research and Developonent &EPA A Guide to the Naididae GOWT. PUB (Annelida: Clitellata: EP l .23/5 :600/ll-80 Oligochaeta) of North –03l America WIVERsity ºf Ballrººmſº RIVERSIDE AUG 2) 1980 LIBRARY GOVERNMENT PUBLICALIONS DEPT. U. S. DEPOSITORY » RESEARCH REPORTING SERIES Research reports of the Office of Research and Development, U.S. Environmental Protection Agency, have been grouped into nine series. These nine broad cate gories were established to facilitate further development and application of en vironmental technology. Elimination of traditional grouping was consciously planned to foster technology transfer and a maximum interface in related fields. The nine series are: Environmental Health Effects Research Environmental Protection Technology Ecological Research Environmental Monitoring Socioeconomic Environmental Studies Scientific and Technical Assessment Reports (STAR) Interagency Energy-Environment Research and Development "Special" Reports Miscellaneous Reports This report has been assigned to the ENVIRONMENTAL MONITORING series. This series describes research conducted to develop new or improved methods and instrumentation for the identification and quantification of environmental pollutants at the lowest conceivably significant concentrations. It also includes studies to determine the ambient concentrations of pollutants in the environment and-or the variance of pollutants as a function of time or meteorological factors. This document is available to the public through the National Technical Informa tion Service, Springfield, Virginia 22161. -
The Distribution and Relative Abundance of Aquatic Oligochaeta
Eastern Illinois University The Keep Masters Theses Student Theses & Publications 1981 The Distribution and Relative Abundance of Aquatic Oligochaeta in the Upper Cache River System, Southern Illinois, in Relation to Water Quality Mark Julian Wetzel Eastern Illinois University This research is a product of the graduate program in Zoology at Eastern Illinois University. Find out more about the program. Recommended Citation Wetzel, Mark Julian, "The Distribution and Relative Abundance of Aquatic Oligochaeta in the Upper Cache River System, Southern Illinois, in Relation to Water Quality" (1981). Masters Theses. 3030. https://thekeep.eiu.edu/theses/3030 This is brought to you for free and open access by the Student Theses & Publications at The Keep. It has been accepted for inclusion in Masters Theses by an authorized administrator of The Keep. For more information, please contact [email protected]. THE DISTRIBUTION AND RELATIVE ABUNDANCE OFAQUATIC OLIGOCHAETA INTHEUPPER CACHE RIVERSYSTEM, SOUTHERN II.I.INOIS, (TITLE) IN RELATION TO WATER QUALITY BY MARK JULIAN WETZEL :::: THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE IN THE GRADUATE SCHOOL, EASTERN ILLINOIS UNIVERSITY CHARLESTON, ILLINOIS 1981 YEAR I HEREBY RECOMMEND THIS THESIS BE ACCEPTED AS FULFILLING THIS PART OF THE GRADUATE DEGREE CITED ABOVE /(�ff DATE THE DISTRIBUTION AND RELATIVE ABUNDANCE OF AQUATIC OLIGOCHAETA IN THE UPPER CACHE RIVER SYSTEM, SOUTHERN ILLINOIS, IN RELATION TO WATER QUALITY A Thesis Presented To The Department Of Zoology Eastern Illinois University In Partial fulfillment Of The Requirements For Tile Degree Master Of Science By Mark Julian Wetzel December, 1981 ii ABSTRACT Species composition, distribution, abundance , and water quality relationships of aquatic oligochaetes occurring in the upper Cache River system, southern Illinois were investigated.