With a Summary of Batesian Mimicry in Marine Fishes
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Suborder BLENNIOIDEI TRIPTERYGIIDAE
click for previous page 3532 Bony Fishes Suborder BLENNIOIDEI TRIPTERYGIIDAE Triplefins by J.T. Williams and R. Fricke iagnostic characters: Small, slender fishes (seldom longer than 5 cm). Cirri often present on top of Deye and on rim of anterior nostril. Upper and lower jaws each with broad band of conical teeth. Three well-defined dorsal fins, the first with III to X (III or IV in the area) spines, the second with VIII to XXVI spines, the third with 7 to 17 segmented rays; last dorsal-fin spine and first segmented ray borne on separate pterygiophores; anal fin with 0 to II spines and 14 to 32 segmented rays; caudal fin with 13 segmented rays, 9 of which are branched; pelvic fins with 2 (3 in Lepidoblennius) simple segmented rays and I embedded spine, the fin inserted anterior to pectoral-fin base. Ctenoid (cycloid in 1 species of Lepidoblennius) scales on body. Colour: highly variable, often showing sexual dichromatism; frequently with irregular bars or a mottled pattern; males may have reddish pigmentation and/or black areas on head and body, females usually mottled with brown or green. 3 dorsal fins ctenoid scales branched anterior insertion caudal-fin of pelvic fins rays Habitat, biology, and fisheries: Benthic, cryptic fishes occurring on rocky or coral substrates in shallow water, but some species are found as deep as 550 m. They are very abundant in littoral areas, but are rarely utilized commercially because of their small size. Of little commercial interest, but they have been found in Indonesian fish markets. Similar families occurring in the area Blenniidae: body always naked (scaly in Tripterygiidae); a single row of incisors in each jaw (Tripterygiidae with several rows of conical teeth, at least anteriorly in jaws); dorsal fin consisting of a single continuous fin, often deeply notched between spinous and segmented rays (3 clearly defined dorsal fins in Tripterygiidae); dorsal fin with more, a few Blenniidae species with 0 to 3 less, segmented than spinous rays (more spines than rays in Tripterygiidae). -
Qt9z7703dj.Pdf
UC San Diego UC San Diego Previously Published Works Title Phylogeny and biogeography of a shallow water fish clade (Teleostei: Blenniiformes) Permalink https://escholarship.org/uc/item/9z7703dj Journal BMC Evolutionary Biology, 13(1) ISSN 1471-2148 Authors Lin, Hsiu-Chin Hastings, Philip A Publication Date 2013-09-25 DOI http://dx.doi.org/10.1186/1471-2148-13-210 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Lin and Hastings BMC Evolutionary Biology 2013, 13:210 http://www.biomedcentral.com/1471-2148/13/210 RESEARCH ARTICLE Open Access Phylogeny and biogeography of a shallow water fish clade (Teleostei: Blenniiformes) Hsiu-Chin Lin1,2* and Philip A Hastings1 Abstract Background: The Blenniiformes comprises six families, 151 genera and nearly 900 species of small teleost fishes closely associated with coastal benthic habitats. They provide an unparalleled opportunity for studying marine biogeography because they include the globally distributed families Tripterygiidae (triplefin blennies) and Blenniidae (combtooth blennies), the temperate Clinidae (kelp blennies), and three largely Neotropical families (Labrisomidae, Chaenopsidae, and Dactyloscopidae). However, interpretation of these distributional patterns has been hindered by largely unresolved inter-familial relationships and the lack of evidence of monophyly of the Labrisomidae. Results: We explored the phylogenetic relationships of the Blenniiformes based on one mitochondrial (COI) and four nuclear (TMO-4C4, RAG1, Rhodopsin, and Histone H3) loci for 150 blenniiform species, and representative outgroups (Gobiesocidae, Opistognathidae and Grammatidae). According to the consensus of Bayesian Inference, Maximum Likelihood, and Maximum Parsimony analyses, the monophyly of the Blenniiformes and the Tripterygiidae, Blenniidae, Clinidae, and Dactyloscopidae is supported. -
Diversity and Length-Weight Relationships of Blenniid Species (Actinopterygii, Blenniidae) from Mediterranean Brackish Waters in Turkey
EISSN 2602-473X AQUATIC SCIENCES AND ENGINEERING Aquat Sci Eng 2019; 34(3): 96-102 • DOI: https://doi.org/10.26650/ASE2019573052 Research Article Diversity and Length-Weight relationships of Blenniid Species (Actinopterygii, Blenniidae) from Mediterranean Brackish Waters in Turkey Deniz İnnal1 Cite this article as: Innal, D. (2019). Diversity and length-weight relationships of Blenniid Species (Actinopterygii, Blenniidae) from Mediterranean Brackish Waters in Turkey. Aquatic Sciences and Engineering, 34(3), 96-102. ABSTRACT This study aims to determine the species composition and range of Mediterranean Blennies (Ac- tinopterygii, Blenniidae) occurring in river estuaries and lagoon systems of the Mediterranean coast of Turkey, and to characterise the length–weight relationship of the specimens. A total of 15 sites were surveyed from November 2014 to June 2017. A total of 210 individuals representing 3 fish species (Rusty blenny-Parablennius sanguinolentus, Freshwater blenny-Salaria fluviatilis and Peacock blenny-Salaria pavo) were sampled from five (Beşgöz Creek Estuary, Manavgat River Es- tuary, Karpuzçay Creek Estuary, Köyceğiz Lagoon Lake and Beymelek Lagoon Lake) of the locali- ties investigated. The high juvenile densities of S. fluviatilis in Karpuzçay Creek Estuary and P. sanguinolentus in Beşgöz Creek Estuary were observed. Various threat factors were observed in five different native habitats of Blenny species. The threats on the habitat and the population of the species include the introduction of exotic species, water ORCID IDs of the authors: pollution, and more importantly, the destruction of habitats. Five non-indigenous species (Prus- D.İ.: 0000-0002-1686-0959 sian carp-Carassius gibelio, Eastern mosquitofish-Gambusia holbrooki, Redbelly tilapia-Copt- 1Burdur Mehmet Akif Ersoy odon zillii, Stone moroko-Pseudorasbora parva and Rainbow trout-Oncorhynchus mykiss) were University, Department of Biology, observed in the sampling sites. -
Omobranchus with Descriptions of Three New Species and Notes on Other Species of the Tribe Omobranchini
Revision of the Blenniid Fish Genus Omobranchus with Descriptions of Three New Species and Notes on Other Species of the Tribe Omobranchini VICTOR G. SPRINGER and MARTIN F. GOMON SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 177 SERIAL PUBLICATIONS OF THE SMITHSONIAN INSTITUTION The emphasis upon publications as a means of diffusing knowledge was expressed by the first Secretary of the Smithsonian Institution. In his formal plan for the Insti- tution, Joseph Henry articulated a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This keynote of basic research has been adhered to over the years in the issuance of thousands of titles in serial publications under the Smithsonian imprint, com- mencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Annals of Flight Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Studies in History and Technology In these series, the Institution publishes original articles and monographs dealing with the research and collections of its several museums and offices and of professional colleagues at other institutions of learning. These papers report newly acquired facts, synoptic interpretations of data, or original theory in specialized fields. These pub- lications are distributed by mailing lists to libraries, laboratories, and other interested institutions and specialists throughout the world. Individual copies may be obtained from the Smithsonian Institution Press as long as stocks are available. -
Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Taverampe2018.Pdf
Molecular Phylogenetics and Evolution 121 (2018) 212–223 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Multilocus phylogeny, divergence times, and a major role for the benthic-to- T pelagic axis in the diversification of grunts (Haemulidae) ⁎ Jose Taveraa,b, , Arturo Acero P.c, Peter C. Wainwrightb a Departamento de Biología, Universidad del Valle, Cali, Colombia b Department of Evolution and Ecology, University of California, Davis, CA 95616, United States c Instituto de Estudios en Ciencias del Mar, CECIMAR, Universidad Nacional de Colombia sede Caribe, El Rodadero, Santa Marta, Colombia ARTICLE INFO ABSTRACT Keywords: We present a phylogenetic analysis with divergence time estimates, and an ecomorphological assessment of the Percomorpharia role of the benthic-to-pelagic axis of diversification in the history of haemulid fishes. Phylogenetic analyses were Fish performed on 97 grunt species based on sequence data collected from seven loci. Divergence time estimation Functional traits indicates that Haemulidae originated during the mid Eocene (54.7–42.3 Ma) but that the major lineages were Morphospace formed during the mid-Oligocene 30–25 Ma. We propose a new classification that reflects the phylogenetic Macroevolution history of grunts. Overall the pattern of morphological and functional diversification in grunts appears to be Zooplanktivore strongly linked with feeding ecology. Feeding traits and the first principal component of body shape strongly separate species that feed in benthic and pelagic habitats. The benthic-to-pelagic axis has been the major axis of ecomorphological diversification in this important group of tropical shoreline fishes, with about 13 transitions between feeding habitats that have had major consequences for head and body morphology. -
Venom Evolution Widespread in Fishes: a Phylogenetic Road Map for the Bioprospecting of Piscine Venoms
Journal of Heredity 2006:97(3):206–217 ª The American Genetic Association. 2006. All rights reserved. doi:10.1093/jhered/esj034 For permissions, please email: [email protected]. Advance Access publication June 1, 2006 Venom Evolution Widespread in Fishes: A Phylogenetic Road Map for the Bioprospecting of Piscine Venoms WILLIAM LEO SMITH AND WARD C. WHEELER From the Department of Ecology, Evolution, and Environmental Biology, Columbia University, 1200 Amsterdam Avenue, New York, NY 10027 (Leo Smith); Division of Vertebrate Zoology (Ichthyology), American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024-5192 (Leo Smith); and Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024-5192 (Wheeler). Address correspondence to W. L. Smith at the address above, or e-mail: [email protected]. Abstract Knowledge of evolutionary relationships or phylogeny allows for effective predictions about the unstudied characteristics of species. These include the presence and biological activity of an organism’s venoms. To date, most venom bioprospecting has focused on snakes, resulting in six stroke and cancer treatment drugs that are nearing U.S. Food and Drug Administration review. Fishes, however, with thousands of venoms, represent an untapped resource of natural products. The first step in- volved in the efficient bioprospecting of these compounds is a phylogeny of venomous fishes. Here, we show the results of such an analysis and provide the first explicit suborder-level phylogeny for spiny-rayed fishes. The results, based on ;1.1 million aligned base pairs, suggest that, in contrast to previous estimates of 200 venomous fishes, .1,200 fishes in 12 clades should be presumed venomous. -
Training Manual Series No.15/2018
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by CMFRI Digital Repository DBTR-H D Indian Council of Agricultural Research Ministry of Science and Technology Central Marine Fisheries Research Institute Department of Biotechnology CMFRI Training Manual Series No.15/2018 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual This is a limited edition of the CMFRI Training Manual provided to participants of the “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals” organized by the Marine Biotechnology Division of Central Marine Fisheries Research Institute (CMFRI), from 2nd February 2015 - 31st March 2018. Principal Investigator Dr. P. Vijayagopal Compiled & Edited by Dr. P. Vijayagopal Dr. Reynold Peter Assisted by Aditya Prabhakar Swetha Dhamodharan P V ISBN 978-93-82263-24-1 CMFRI Training Manual Series No.15/2018 Published by Dr A Gopalakrishnan Director, Central Marine Fisheries Research Institute (ICAR-CMFRI) Central Marine Fisheries Research Institute PB.No:1603, Ernakulam North P.O, Kochi-682018, India. 2 Foreword Central Marine Fisheries Research Institute (CMFRI), Kochi along with CIFE, Mumbai and CIFA, Bhubaneswar within the Indian Council of Agricultural Research (ICAR) and Department of Biotechnology of Government of India organized a series of training programs entitled “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals”. -
Perciformes: Haemulidae) Inferred Using Mitochondrial and Nuclear Genes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/256288239 A molecular phylogeny of the Grunts (Perciformes: Haemulidae) inferred using mitochondrial and nuclear genes Article in Zootaxa · June 2011 DOI: 10.11646/zootaxa.2966.1.4 CITATIONS READS 35 633 3 authors, including: Millicent D Sanciangco Luiz A Rocha Old Dominion University California Academy of Sciences 26 PUBLICATIONS 1,370 CITATIONS 312 PUBLICATIONS 8,691 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Mesophotic Coral Reefs View project Vitória-Trindade Chain View project All content following this page was uploaded by Luiz A Rocha on 20 May 2014. The user has requested enhancement of the downloaded file. Zootaxa 2966: 37–50 (2011) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2011 · Magnolia Press ISSN 1175-5334 (online edition) A molecular phylogeny of the Grunts (Perciformes: Haemulidae) inferred using mitochondrial and nuclear genes MILLICENT D. SANCIANGCO1, LUIZ A. ROCHA2 & KENT E. CARPENTER1 1Department of Biological Sciences, Old Dominion University, Mills Godwin Building, Norfolk, VA 23529 USA. E-mail: [email protected], [email protected] 2Marine Science Institute, University of Texas at Austin, 750 Channel View Dr., Port Aransas, TX 78373, USA. E-mail: [email protected] Abstract We infer a phylogeny of haemulid genera using mitochondrial COI and Cyt b genes and nuclear RAG1, SH3PX3, and Plagl2 genes from 56 haemulid species representing 18 genera of the expanded haemulids (including the former inermiids) and ten outgroup species. Results from maximum parsimony, maximum likelihood, and Bayesian analyses show strong support for a monophyletic Haemulidae with the inclusion of Emmelichthyops atlanticus. -
2008 Board of Governors Report
American Society of Ichthyologists and Herpetologists Board of Governors Meeting Le Centre Sheraton Montréal Hotel Montréal, Quebec, Canada 23 July 2008 Maureen A. Donnelly Secretary Florida International University Biological Sciences 11200 SW 8th St. - OE 167 Miami, FL 33199 [email protected] 305.348.1235 31 May 2008 The ASIH Board of Governor's is scheduled to meet on Wednesday, 23 July 2008 from 1700- 1900 h in Salon A&B in the Le Centre Sheraton, Montréal Hotel. President Mushinsky plans to move blanket acceptance of all reports included in this book. Items that a governor wishes to discuss will be exempted from the motion for blanket acceptance and will be acted upon individually. We will cover the proposed consititutional changes following discussion of reports. Please remember to bring this booklet with you to the meeting. I will bring a few extra copies to Montreal. Please contact me directly (email is best - [email protected]) with any questions you may have. Please notify me if you will not be able to attend the meeting so I can share your regrets with the Governors. I will leave for Montréal on 20 July 2008 so try to contact me before that date if possible. I will arrive late on the afternoon of 22 July 2008. The Annual Business Meeting will be held on Sunday 27 July 2005 from 1800-2000 h in Salon A&C. Please plan to attend the BOG meeting and Annual Business Meeting. I look forward to seeing you in Montréal. Sincerely, Maureen A. Donnelly ASIH Secretary 1 ASIH BOARD OF GOVERNORS 2008 Past Presidents Executive Elected Officers Committee (not on EXEC) Atz, J.W. -
DNA Barcoding Indian Marine Fishes
Molecular Ecology Resources (2011) 11, 60–71 doi: 10.1111/j.1755-0998.2010.02894.x DNA BARCODING DNA barcoding Indian marine fishes W. S. LAKRA,* M. S. VERMA,* M. GOSWAMI,* K. K. LAL,* V. MOHINDRA,* P. PUNIA,* A. GOPALAKRISHNAN,* K. V. SINGH,* R. D. WARD† and P. HEBERT‡ *National Bureau of Fish Genetic Resources, Lucknow-226002, India, †CSIRO Marine and Atmospheric Research, GPO Box 1538, Hobart, Tasmania 7001, Australia, ‡Biodiversity Institute of Ontario, University of Guelph, Ontario, Canada N1G 2WI Abstract DNA barcoding has been adopted as a global bio-identification system for animals in recent years. A major national pro- gramme on DNA barcoding of fish and marine life was initiated in India by the authors during 2006 and 115 species of marine fish covering Carangids, Clupeids, Scombrids, Groupers, Sciaenids, Silverbellies, Mullids, Polynemids and Silur- ids representing 79 Genera and 37 Families from the Indian Ocean have been barcoded for the first time using cytochrome c oxidase I gene (COI) of the mtDNA. The species were represented by multiple specimens and a total of 397 sequences were generated. After amplification and sequencing of 707 base pair fragment of COI, primers were trimmed which invari- ably generated a 655 base pair barcode sequence. The average Kimura two parameter (K2P) distances within species, gen- era, families, orders were 0.30%, 6.60%, 9.91%, 16.00%, respectively. In addition to barcode-based species identification system, phylogenetic relationships among the species have also been attempted. The neighbour-joining tree revealed distinct clusters in concurrence with the taxonomic status of the species. -
Using a Collaborative Data Collection Method to Update Life-History Values for Snapper And
bioRxiv preprint doi: https://doi.org/10.1101/655571; this version posted May 30, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Using a collaborative data collection method to update life-history values for snapper and 2 grouper in Indonesia’s deep-slope demersal fishery 3 4 Elle Wibisono1*, Peter Mous2, Austin Humphries1,3 5 1 Department of Fisheries, Animal and Veterinary Sciences, University of Rhode Island, 6 Kingston, Rhode Island, USA 7 2 The Nature Conservancy Indonesia Fisheries Conservation Program, Bali, Indonesia 8 3 Graduate School of Oceanography, University of Rhode Island, Narragansett, Rhode Island, 9 USA 10 11 12 *Corresponding author 13 E-mail: [email protected] (EW) 14 15 1 bioRxiv preprint doi: https://doi.org/10.1101/655571; this version posted May 30, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 16 Abstract 17 The deep-slope demersal fishery that targets snapper and grouper species is an important fishery 18 in Indonesia. Boats operate at depths between 50-500 m using drop lines and bottom long lines. 19 There are few data, however, on the basic characteristics of the fishery which impedes accurate 20 stock assessments and the establishment of harvest control rules.