Epibiotic Protozoans and Syllid Polychaetes. Implications for The
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Novel Contributions to the Peritrich Family Vaginicolidae
applyparastyle “fig//caption/p[1]” parastyle “FigCapt” Zoological Journal of the Linnean Society, 2019, 187, 1–30. With 13 figures. Novel contributions to the peritrich family Vaginicolidae (Protista: Ciliophora), with morphological and Downloaded from https://academic.oup.com/zoolinnean/article-abstract/187/1/1/5434147/ by Ocean University of China user on 08 October 2019 phylogenetic analyses of poorly known species of Pyxicola, Cothurnia and Vaginicola BORONG LU1, LIFANG LI2, XIAOZHONG HU1,5,*, DAODE JI3,*, KHALED A. S. AL-RASHEID4 and WEIBO SONG1,5 1Institute of Evolution and Marine Biodiversity, & Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, China 2Marine College, Shandong University, Weihai 264209, China 3School of Ocean, Yantai University, Yantai 264005, China 4Zoology Department, College of Science, King Saud University, Riyadh 11451, Saudi Arabia 5Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266237, China Received 29 September 2018; revised 26 December 2018; accepted for publication 13 February 2019 The classification of loricate peritrich ciliates is difficult because of an accumulation of several taxonomic problems. In the present work, three poorly described vaginicolids, Pyxicola pusilla, Cothurnia ceramicola and Vaginicola tincta, were isolated from the surface of two freshwater/marine algae in China. In our study, the ciliature of Pyxicola and Vaginicola is revealed for the first time, demonstrating the taxonomic value of infundibular polykineties. The small subunit rDNA, ITS1-5.8S rDNA-ITS2 region and large subunit rDNA of the above species were sequenced for the first time. Phylogenetic analyses based on these genes indicated that Pyxicola and Cothurnia are closely related. -
Annelida, Phyllodocida)
A peer-reviewed open-access journal ZooKeys 488: 1–29Guide (2015) and keys for the identification of Syllidae( Annelida, Phyllodocida)... 1 doi: 10.3897/zookeys.488.9061 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species) Guillermo San Martín1, Tim M. Worsfold2 1 Departamento de Biología (Zoología), Laboratorio de Biología Marina e Invertebrados, Facultad de Ciencias, Universidad Autónoma de Madrid, Canto Blanco, 28049 Madrid, Spain 2 APEM Limited, Diamond Centre, Unit 7, Works Road, Letchworth Garden City, Hertfordshire SG6 1LW, UK Corresponding author: Guillermo San Martín ([email protected]) Academic editor: Chris Glasby | Received 3 December 2014 | Accepted 1 February 2015 | Published 19 March 2015 http://zoobank.org/E9FCFEEA-7C9C-44BF-AB4A-CEBECCBC2C17 Citation: San Martín G, Worsfold TM (2015) Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species). ZooKeys 488: 1–29. doi: 10.3897/zookeys.488.9061 Abstract In November 2012, a workshop was carried out on the taxonomy and systematics of the family Syllidae (Annelida: Phyllodocida) at the Dove Marine Laboratory, Cullercoats, Tynemouth, UK for the National Marine Biological Analytical Quality Control (NMBAQC) Scheme. Illustrated keys for subfamilies, genera and species found in British and Irish waters were provided for participants from the major national agencies and consultancies involved in benthic sample processing. After the workshop, we prepared updates to these keys, to include some additional species provided by participants, and some species reported from nearby areas. -
Annual Report
Darwin Initiative Annual Report Important note: To be completed with reference to the Reporting Guidance Notes for Project Leaders – it is expected that this report will be about 10 pages in length, excluding annexes Submission deadline 30 April 2009 Darwin Project Information Project Ref Number 14-015 Project Title Conservation of Jiaozhou Bay: biodiversity assessment and biomonitoring using ciliates Country(ies) China UK Contract Holder Institution The Natural History Museum Host country Partner Institution(s) Ocean University of China Other Partner Institution(s) n/a Darwin Grant Value £137,897 Start/End dates of Project 1/11/05 – 30/09/09 Reporting period (1 Apr 200x to 1 Apr 2008 to 31 Mar 2009 31 Mar 200y) and annual report number (1,2,3..) Annual report no. 4 Project Leader Name Dr Alan Warren Project website Author(s) and main contributors, Dr Alan Warren (NHM); Professor Weibo Song (OUC); date Professor Xiaozhong Hu (OUC) 27 April 2009 1. Project Background Jiaozhou Bay is located near Qingdao on the NE coast of China (see map) and is a major centre for fisheries and mariculture industries, including fish, molluscs and crustaceans. It is also identified in China`s Biodiversity Action Plan (BCAP) as a potential nature reserve due to its high species richness. The environmental quality of the water in Jiaozhou Bay is therefore of immense significance for: (i) the maintenance of fisheries stock; (ii) successful mariculture; (iii) biodiversity conservation. Increased industrial activity and inadequate wastewater treatment in the area surrounding the bay, however, is compromising the marine water quality. Consequently Jiaozhou Bay is one of only seven estuarine wetland ecosystems listed in the BCAP as requiring priority conservation attention. -
Ciliate Biodiversity and Phylogenetic Reconstruction Assessed by Multiple Molecular Markers Micah Dunthorn University of Massachusetts Amherst, [email protected]
University of Massachusetts Amherst ScholarWorks@UMass Amherst Open Access Dissertations 9-2009 Ciliate Biodiversity and Phylogenetic Reconstruction Assessed by Multiple Molecular Markers Micah Dunthorn University of Massachusetts Amherst, [email protected] Follow this and additional works at: https://scholarworks.umass.edu/open_access_dissertations Part of the Life Sciences Commons Recommended Citation Dunthorn, Micah, "Ciliate Biodiversity and Phylogenetic Reconstruction Assessed by Multiple Molecular Markers" (2009). Open Access Dissertations. 95. https://doi.org/10.7275/fyvd-rr19 https://scholarworks.umass.edu/open_access_dissertations/95 This Open Access Dissertation is brought to you for free and open access by ScholarWorks@UMass Amherst. It has been accepted for inclusion in Open Access Dissertations by an authorized administrator of ScholarWorks@UMass Amherst. For more information, please contact [email protected]. CILIATE BIODIVERSITY AND PHYLOGENETIC RECONSTRUCTION ASSESSED BY MULTIPLE MOLECULAR MARKERS A Dissertation Presented by MICAH DUNTHORN Submitted to the Graduate School of the University of Massachusetts Amherst in partial fulfillment of the requirements for the degree of Doctor of Philosophy September 2009 Organismic and Evolutionary Biology © Copyright by Micah Dunthorn 2009 All Rights Reserved CILIATE BIODIVERSITY AND PHYLOGENETIC RECONSTRUCTION ASSESSED BY MULTIPLE MOLECULAR MARKERS A Dissertation Presented By MICAH DUNTHORN Approved as to style and content by: _______________________________________ -
Eusyllinae and Syllinae (Annelida: Polychaeta) from Northern Cyprus (Eastern Mediterranean Sea) with a Checklist of Species Reported from the Levant Sea
BULLETIN OF MARINE SCIENCE, 72(3): 769–793, 2003 EUSYLLINAE AND SYLLINAE (ANNELIDA: POLYCHAETA) FROM NORTHERN CYPRUS (EASTERN MEDITERRANEAN SEA) WITH A CHECKLIST OF SPECIES REPORTED FROM THE LEVANT SEA Melih Ertan Çinar and Zeki Ergen ABSTRACT Shallow and deep-water benthic samples collected during two cruises to northern Cyprus held in 1997 and 1998 showed relatively high species richness of Eusyllinae and Syllinae, with a total of 49 species. The materials contained one species (Eusyllis kupfferi Langer- hans, 1879) new to the Mediterranean Sea, seven species new to the Eastern Mediterra- nean Sea, 23 species new to the Levantine Sea and 42 species new to Cyprus. The mor- phological, biometrical and distributional characteristics of the species as well as a checklist of the Eusyllinae and Syllinae species reported from the Levant coast are provided. A review of papers treating zoobenthos of the Levantine Sea revealed a total of 33 species of Eusyllinae and Syllinae, eight of which were reported from Cyprus: Eusyllis assimilis, Syllides edentulus (as S. edentula), Ehlersia ferrugina, Haplosyllis spongicola, Syllis armillaris, S. prolifera, S. variegata, and Trypanosyllis zebra (Ben-Eliahu, 1972, 1995; Ben-Eliahu and Fiege, 1995; Russo, 1997). The present study deals with species richness of Eusyllinae and Syllinae inhabiting shallow and deep-water benthic assemblages of the Cypriot coast, and their morphometrical and distributional patterns. METHODS Sampling procedures, depths and nature of the substrata are given in Çinar et al. (this volume). RESULTS Faunistic analysis of a total of 77 benthic samples taken by the R/V K. PIRI REIS during two cruises in May 1997 and July 1998, yielded 1679 specimens belonging to 49 species; the Eusyllinae had 16 species and 347 individuals, and the Syllinae possessed 33 species and 1332 individuals. -
Chec List Marine and Coastal Biodiversity of Oaxaca, Mexico
Check List 9(2): 329–390, 2013 © 2013 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution ǡ PECIES * S ǤǦ ǡÀ ÀǦǡ Ǧ ǡ OF ×±×Ǧ±ǡ ÀǦǡ Ǧ ǡ ISTS María Torres-Huerta, Alberto Montoya-Márquez and Norma A. Barrientos-Luján L ǡ ǡǡǡǤͶǡͲͻͲʹǡǡ ǡ ȗ ǤǦǣ[email protected] ćĘęėĆĈęǣ ϐ Ǣ ǡǡ ϐǤǡ ǤǣͳȌ ǢʹȌ Ǥͳͻͺ ǯϐ ʹǡͳͷ ǡͳͷ ȋǡȌǤǡϐ ǡ Ǥǡϐ Ǣ ǡʹͶʹȋͳͳǤʹΨȌ ǡ groups (annelids, crustaceans and mollusks) represent about 44.0% (949 species) of all species recorded, while the ʹ ȋ͵ͷǤ͵ΨȌǤǡ not yet been recorded on the Oaxaca coast, including some platyhelminthes, rotifers, nematodes, oligochaetes, sipunculids, echiurans, tardigrades, pycnogonids, some crustaceans, brachiopods, chaetognaths, ascidians and cephalochordates. The ϐϐǢ Ǥ ēęėĔĉĚĈęĎĔē Madrigal and Andreu-Sánchez 2010; Jarquín-González The state of Oaxaca in southern Mexico (Figure 1) is and García-Madrigal 2010), mollusks (Rodríguez-Palacios known to harbor the highest continental faunistic and et al. 1988; Holguín-Quiñones and González-Pedraza ϐ ȋ Ǧ± et al. 1989; de León-Herrera 2000; Ramírez-González and ʹͲͲͶȌǤ Ǧ Barrientos-Luján 2007; Zamorano et al. 2008, 2010; Ríos- ǡ Jara et al. 2009; Reyes-Gómez et al. 2010), echinoderms (Benítez-Villalobos 2001; Zamorano et al. 2006; Benítez- ϐ Villalobos et alǤʹͲͲͺȌǡϐȋͳͻͻǢǦ Ǥ ǡ 1982; Tapia-García et alǤ ͳͻͻͷǢ ͳͻͻͺǢ Ǧ ϐ (cf. García-Mendoza et al. 2004). ǡ ǡ studies among taxonomic groups are not homogeneous: longer than others. Some of the main taxonomic groups ȋ ÀʹͲͲʹǢǦʹͲͲ͵ǢǦet al. -
Polychaeta) with Reference to What Was Published in the Red Sea and Suez Canal, Egypt
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 23(5): 235 - 251 (2019) www.ejabf.journals.ekb.eg Catalog of Syllidae (Polychaeta) with reference to what was published in the Red Sea and Suez Canal, Egypt Faiza Ali Abd- Elnaby National Institute of Oceanography and Fisheries (NIOF) Alexandria, Egypt. [email protected] ARTICLE INFO ABSTRACT Article History: Thirty-six Syllid species were identified in the Petro Gulf Misr Received: Nov. 19, 2019 Project (2017, 2018, 2019). 58 sediment samples were collected from Accepted: Dec. 20, 2019 the Suez Gulf (Gable El Zeit Area). The data revealed that 36 syllidae Online: Dec. 23, 2019 species were recorded; 19 of them are considered new recorded _______________ species reported for the first time during the present study (Species Keywords: with*). Of these species, 13 of them were previously reported in the Polychaetes Suez Canal. This research is considered a new addition to the family Syllidae monitoring work of polychaetes in the Gulf of Suez, supplied by data Suez Gulf and distribution of Syllidae species in the Suez Canal, Red Sea and Suez Canal Suez Gulf region. Adding notes of description for some. Red Sea INTRODUCTION Syllidae are small-sized polychaetes occurring on all substrates, the Syllidae are the most widespread family, including about 900 distinct species belonging to more than 80 genera with complicated morphological and ecological characteristics (Faulwetter et al. 2011). Many polychaetes studies have been conducted in the Suez Canal, Suez Gulf and Aqaba Gulf (Fauvel, 1927; Ben-Eliahu, 1972; Amoureux et al.; Wehe and Fiege, 2002; Hove et al., 2006). -
Zoothamnium Ignavum Sp
RESEARCH ARTICLE A Novel Colonial Ciliate Zoothamnium ignavum sp. nov. (Ciliophora, Oligohymeno- phorea) and Its Ectosymbiont Candidatus Navis piranensis gen. nov., sp. nov. from Shallow-Water Wood Falls Lukas Schuster*, Monika Bright University of Vienna, Departmentof Limnology and Bio-Oceanography, Althanstraße 14, A-1090 Vienna, Austria * [email protected] a11111 Abstract Symbioses between ciliate hosts and prokaryote or unicellular eukaryote symbionts are widespread. Here, we report on a novel ciliate species within the genus Zoothamnium Bory de St. Vincent, 1824, isolated from shallow-water sunken wood in the North Adriatic Sea OPEN ACCESS (Mediterranean Sea), proposed as Zoothamnium ignavum sp. nov. We found this ciliate Citation: Schuster L, Bright M (2016) A Novel species to be associated with a novel genus of bacteria, here proposed as “Candidatus Colonial Ciliate Zoothamnium ignavum sp. nov. Navis piranensis” gen. nov., sp. nov. The descriptions of host and symbiont species are (Ciliophora, Oligohymeno-phorea) and Its based on morphological and ultrastructural studies, the SSU rRNA sequences, and in situ Ectosymbiont Candidatus Navis piranensis gen. nov., sp. nov. from Shallow-Water Wood Falls. PLoS ONE hybridization with symbiont-specific probes. The host is characterized by alternate micro- 11(9): e0162834. doi:10.1371/journal.pone.0162834 zooids on alternate branches arising from a long, common stalk with an adhesive disc. Editor: Jonathan H. Badger, National Cancer Three different types of zooids are present: microzooids with a bulgy oral side, roundish to Institute,UNITED STATES ellipsoid macrozooids, and terminal zooids ellipsoid when dividing or bulgy when undividing. Received: June 9, 2016 The oral ciliature of the microzooids runs 1¼ turns in a clockwise direction around the peri- stomial disc when viewed from inside the cell and runs into the infundibulum, where it Accepted: August 29, 2016 makes another ¾ turn. -
Lobban & Schefter 2008
Micronesica 40(1/2): 253–273, 2008 Freshwater biodiversity of Guam. 1. Introduction, with new records of ciliates and a heliozoan CHRISTOPHER S. LOBBAN and MARÍA SCHEFTER Division of Natural Sciences, College of Natural & Applied Sciences, University of Guam, Mangilao, GU 96923 Abstract—Inland waters are the most endangered ecosystems in the world because of complex threats and management problems, yet the freshwater microbial eukaryotes and microinvertebrates are generally not well known and from Guam are virtually unknown. Photo- documentation can provide useful information on such organisms. In this paper we document protists from mostly lentic inland waters of Guam and report twelve freshwater ciliates, especially peritrichs, which are the first records of ciliates from Guam or Micronesia. We also report a species of Raphidiophrys (Heliozoa). Undergraduate students can meaningfully contribute to knowledge of regional biodiversity through individual or class projects using photodocumentation. Introduction Biodiversity has become an important field of study since it was first recognized as a concept some 20 years ago. It includes the totality of heritable variation at all levels, including numbers of species, in an ecosystem or the world (Wilson 1997). Biodiversity encompasses our recognition of the “ecosystem services” provided by organisms, the interconnectedness of species, and the impact of human activities, including global warming, on ecosystems and biodiversity (Reaka-Kudla et al. 1997). Current interest in biodiversity has prompted global bioinformatics efforts to identify species through DNA “barcodes” (Hebert et al. 2002) and to make databases accessible through the Internet (Ratnasingham & Hebert 2007, Encyclopedia of Life 2008). Biodiversity patterns are often contrasted between terrestrial ecosystems, with high endemism, and marine ecosystems, with low endemism except in the most remote archipelagoes (e.g., Hawai‘i), but patterns in Oceania suggest that this contrast may not be so clear as it seemed (Paulay & Meyer 2002). -
Polychaeta: Syllidae) from South Africa, One of Them Viviparous, with Remarks on Larval Development and Vivipary
Simon C, San Martín G, Robinson G. Two new species of Syllis (Polychaeta: Syllidae) from South Africa, one of them viviparous, with remarks on larval development and vivipary. Journal of the Marine Biological Association of the United Kingdom 2014, 94(4), 729-746. Copyright: This is the authors’ accepted manuscript of an article that was published in its final definitive form by Cambridge University Press, 2014. Link to published article: http://dx.doi.org/10.1017/S0025315413001926 Date deposited: 16/12/2015 This work is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License Newcastle University ePrints - eprint.ncl.ac.uk Journal of the Marine Biological Association of the United Kingdom Page 2 of 36 1 Running head: New Syllis from South Africa 2 3 Two new species of Syllis (Polychaeta: Syllidae) from South Africa, one of them 4 viviparous, with remarks on larval development and vivipary 5 6 Carol Simon * 1, Guillermo San Martín 2, Georgina Robinson 3 7 1 Department of Botany and Zoology, Stellenbosch University, Stellenbosch, South 8 Africa. 9 2 Departmento de Biología (Zoología), Facultad de Ciencias, Universidad Autónoma de 10 Madrid, Canto Blanco, 28049 Madrid, Spain 11 3 School of Marine Science and Technology, Newcastle University, Newcastle NE3 12 7RU, UK & Department of Ichthyology and Fisheries Science, Rhodes University, 13 Grahamstown 6140,For South Africa.Review Only 14 15 *Corresponding author: Tel +27 21 808 3068; Fax: +27 21 808 2405. Email address: 16 [email protected] 17 1 Cambridge University Press Page 3 of 36 Journal of the Marine Biological Association of the United Kingdom 18 Abstract 19 20 Two new species of South African Syllidae of the genus Syllis Lamarck, 1818 21 are described. -
Cellular Proliferation Dynamics During Regeneration in Syllis Malaquini
Ribeiro et al. Frontiers in Zoology (2021) 18:27 https://doi.org/10.1186/s12983-021-00396-y RESEARCH Open Access Cellular proliferation dynamics during regeneration in Syllis malaquini (Syllidae, Annelida) Rannyele Passos Ribeiro1* , Bernhard Egger2 , Guillermo Ponz-Segrelles1 and M. Teresa Aguado3* Abstract Background: In syllids (Annelida, Syllidae), the regenerative blastema was subject of many studies in the mid and late XXth century. This work on syllid regeneration showed that the blastema is developed by a process of dedifferentiation of cells near the wound, followed by their proliferation and redifferentiation (cells differentiate to the original cell type) or, in some specific cases, transdifferentiation (cells differentiate to a cell type different from the original). Up to date, participation of stem cells or pre-existing proliferative cells in the blastema development has never been observed in syllids. This study provides the first comprehensive description of Syllis malaquini’s regenerative capacity, including data on the cellular proliferation dynamics by using an EdU/BrdU labelling approach, in order to trace proliferative cells (S-phase cells) present before and after operation. Results: Syllis malaquini can restore the anterior and posterior body from different cutting levels under experimental conditions, even from midbody fragments. Our results on cellular proliferation showed that S-phase cells present in the body before bisection do not significantly contribute to blastema development. However, in some specimens cut at the level of the proventricle, cells in S-phase located in the digestive tube before bisection participated in regeneration. Also, our results showed that nucleus shape allows to distinguish different types of blastemal cells as forming specific tissues. -
Classification of the Phylum Ciliophora (Eukaryota, Alveolata)
1! The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised 2! Classification of the Phylum Ciliophora (Eukaryota, Alveolata) 3! 4! Feng Gao a, Alan Warren b, Qianqian Zhang c, Jun Gong c, Miao Miao d, Ping Sun e, 5! Dapeng Xu f, Jie Huang g, Zhenzhen Yi h,* & Weibo Song a,* 6! 7! a Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 8! China; b Department of Life Sciences, Natural History Museum, London, UK; c Yantai 9! Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, China; d 10! College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China; 11! e Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, 12! Xiamen University, Xiamen, China; f State Key Laboratory of Marine Environmental 13! Science, Institute of Marine Microbes and Ecospheres, Xiamen University, Xiamen, 14! China; g Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China; h 15! School of Life Science, South China Normal University, Guangzhou, China. 16! 17! Running Head: Phylogeny and evolution of Ciliophora 18! *!Address correspondence to Zhenzhen Yi, [email protected]; or Weibo Song, 19! [email protected] 20! ! ! 1! Table S1. List of species for which SSU rDNA, 5.8S rDNA, LSU rDNA, and alpha-tubulin were newly sequenced in the present work. ! ITS1-5.8S- Class Subclass Order Family Speicies Sample sites SSU rDNA LSU rDNA a-tubulin ITS2 A freshwater pond within the campus of 1 COLPODEA Colpodida Colpodidae Colpoda inflata the South China Normal University, KM222106 KM222071 KM222160 Guangzhou (23° 09′N, 113° 22′ E) Climacostomum No.